Miyakogusa Predicted Gene

Lj1g3v1785860.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1785860.1 Non Chatacterized Hit- tr|G1RFD5|G1RFD5_NOMLE
Uncharacterized protein OS=Nomascus leucogenys
GN=FUBP,36.93,3e-18,seg,NULL; KH_1,K Homology domain, type 1; KH
DOMAIN-CONTAINING PROTEIN,NULL; KH DOMAIN CONTAINING RN,CUFF.27848.1
         (597 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G25970.1 | Symbols:  | KH domain-containing protein | chr2:11...   336   2e-92
AT4G10070.1 | Symbols:  | KH domain-containing protein | chr4:62...   187   2e-47
AT1G33680.1 | Symbols:  | KH domain-containing protein | chr1:12...   177   2e-44
AT5G04430.2 | Symbols: BTR1, BTR1L | binding to TOMV RNA 1L (lon...    75   2e-13
AT5G04430.1 | Symbols: BTR1, BTR1S | binding to TOMV RNA 1L (lon...    74   4e-13
AT5G15270.1 | Symbols:  | RNA-binding KH domain-containing prote...    56   9e-08
AT5G15270.2 | Symbols:  | RNA-binding KH domain-containing prote...    56   9e-08
AT3G04610.1 | Symbols: FLK | RNA-binding KH domain-containing pr...    55   1e-07
AT1G14170.3 | Symbols:  | RNA-binding KH domain-containing prote...    54   4e-07
AT1G14170.1 | Symbols:  | RNA-binding KH domain-containing prote...    53   5e-07
AT1G14170.2 | Symbols:  | RNA-binding KH domain-containing prote...    53   5e-07
AT5G06770.1 | Symbols:  | KH domain-containing protein / zinc fi...    52   9e-07
AT5G64390.2 | Symbols: HEN4 | RNA-binding KH domain-containing p...    50   3e-06
AT5G64390.1 | Symbols: HEN4 | RNA-binding KH domain-containing p...    50   4e-06
AT5G64390.3 | Symbols: HEN4 | RNA-binding KH domain-containing p...    50   4e-06

>AT2G25970.1 | Symbols:  | KH domain-containing protein |
           chr2:11071844-11075604 REVERSE LENGTH=632
          Length = 632

 Score =  336 bits (862), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 284/653 (43%), Positives = 339/653 (51%), Gaps = 111/653 (16%)

Query: 1   MAEEAHYAAPASESLKRKYDEPP-----THRPTGFSS---PHSTVS-------------- 38
           MA+E+ Y++  + S KRKY+EP      T RPTGFSS   P ++V               
Sbjct: 1   MADESQYSS-DTYSNKRKYEEPTAPPPSTRRPTGFSSGPIPSASVDPTAPTGLPPSSYNS 59

Query: 39  ------DIELAKQKAQEVAARLFSGAXXXXXXXXXXXXXNAAPPSSFDSI---------D 83
                 +I++AKQKAQE+AARL + A             +      F S           
Sbjct: 60  VPPPMDEIQIAKQKAQEIAARLLNSADAKRPRVDNGASYDYGDNKGFSSYPSEGKQMSGT 119

Query: 84  LKAQYPVS--TYQTSSKKIDIPSGRVGVIIGKGGETIKSLQLRSGAKIQVTRDMDADPNS 141
           + +  PVS  ++Q ++KKIDIP+ RVGVIIGKGGETIK LQL+SGAKIQVTRDMDADPN 
Sbjct: 120 VPSSIPVSYGSFQGTTKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNC 179

Query: 142 PNRLVELMGSPEAIADAEKLINEVLAEAESGGSGMIGRRLTGQSGS---ADEFSMQIPNN 198
             R V+L G+P+ I+ AE+LI +VL EAE+G +   G     + G    AD+F M+IPNN
Sbjct: 180 ATRTVDLTGTPDQISKAEQLITDVLQEAEAGNTAGSGGGGGRRMGGQAGADQFVMKIPNN 239

Query: 199 KVGLIIGKGGETIKSMQAESGARIQVIPLHLPPGDPSTERTLKIDGSPEQIESAKQLVNQ 258
           KVGLIIGKGGETIKSMQA++GARIQVIPLHLPPGDP+ ERTL+IDG  EQIE AKQLVN+
Sbjct: 240 KVGLIIGKGGETIKSMQAKTGARIQVIPLHLPPGDPTPERTLQIDGITEQIEHAKQLVNE 299

Query: 259 IINGENRPRNSG-----GYSQQGYXXXXXXXXXXXXXXXXXXGYGYMQPGAYSGQAPQYN 313
           II+GENR RNS                                 GYMQPGAY G  PQY 
Sbjct: 300 IISGENRMRNSAMGGGYPQQGGYQARPPSSWAPPGGPPAQPGYGGYMQPGAYPG-PPQYG 358

Query: 314 MXXXXXXXXXXXXXXXXSTNWDQSTAPPNQPTAGXXXXXXXXXXXXXXXXXXXXX--XDG 371
                            +  +DQS+ PP+Q +A                         D 
Sbjct: 359 Q-----SPYGSYPQQTSAGYYDQSSVPPSQQSAQGEYDYYGQQQSQQPSSGGSSAPPTDT 413

Query: 372 STYNYSQPPSSGYNHPGQGYGQDGYSAYNAPPQSGYGQPPTYDQQQGYGSAPSYGSSNPA 431
           + YNY Q  +SGY   GQGY QDGY AYNA  QSGYGQ   YDQQ GYGS     ++NP+
Sbjct: 414 TGYNYYQ-HASGYGQAGQGYQQDGYGAYNASQQSGYGQAAGYDQQGGYGS-----TTNPS 467

Query: 432 QEGNTSSYGAQGDSSQAPSVQPSTAAAQGYATN-QQP---NSTSQQGYGAPPPTSQAAXX 487
           QE          D+SQA     + +   GY T  QQP    ST Q GYGA PPTSQA   
Sbjct: 468 QE---------EDASQAAPPSSAQSGQAGYGTTGQQPPAQGSTGQAGYGA-PPTSQAGYS 517

Query: 488 XXXXXXXXXXXXXXVKPSGTPPVYGQS-QSPSTAGGYXXXXXXXXXXXXXXXXXXDQKAP 546
                           P+  PP YGQS QSP   G Y                       
Sbjct: 518 SQPAAAYNSGYGAP-PPASKPPTYGQSQQSPGAPGSYGSQ-------------------- 556

Query: 547 ASGYGVAAQPGYG-PQSYGAPQGSYGQAPPSYGNSSYGAGYAQTPA---YASD 595
            SGY   A  GYG P +YG     YGQAP  YG  SYG GY Q  A   Y+SD
Sbjct: 557 -SGYAQPAASGYGQPPAYG-----YGQAPQGYG--SYG-GYTQPAAGGGYSSD 600


>AT4G10070.1 | Symbols:  | KH domain-containing protein |
           chr4:6295608-6299759 REVERSE LENGTH=725
          Length = 725

 Score =  187 bits (475), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 99/197 (50%), Positives = 136/197 (69%), Gaps = 5/197 (2%)

Query: 85  KAQYPVSTYQTSSKKIDIPSGRVGVIIGKGGETIKSLQLRSGAKIQVTRDMDADPNSPNR 144
           K+Q  V   Q+++++ID+PS +VGV+IGKGGETI+ LQ  SGAKIQ+ RD +ADP+S  R
Sbjct: 165 KSQKEVDGTQSTTRRIDVPSSKVGVLIGKGGETIRYLQFNSGAKIQILRDSEADPSSALR 224

Query: 145 LVELMGSPEAIADAEKLINEVLAEAESGGSGMI---GRRLTGQSGSADEFSMQIPNNKVG 201
            VE++GS   I  AEKLI+ V+AEAE+GGS  +   G   T   G  ++  +++PN+KVG
Sbjct: 225 PVEIIGSVACIESAEKLISAVIAEAEAGGSPALVARGHPSTHAIGIPEQIEIKVPNDKVG 284

Query: 202 LIIGKGGETIKSMQAESGARIQVIPLHLPPGDPSTERTLKIDGSPEQIESAKQLVNQIIN 261
           LIIG+GGETIK+MQ  SGAR Q+IP H   GD   ERT++I G   QI+ A  ++  ++N
Sbjct: 285 LIIGRGGETIKNMQTRSGARTQLIPQHA-EGDGLKERTVRISGDKMQIDIATDMIKDVMN 343

Query: 262 GENRPRN-SGGYSQQGY 277
              RP + SGGY+Q  Y
Sbjct: 344 QNARPSSYSGGYNQPAY 360


>AT1G33680.1 | Symbols:  | KH domain-containing protein |
           chr1:12204056-12208282 FORWARD LENGTH=763
          Length = 763

 Score =  177 bits (448), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 89/189 (47%), Positives = 131/189 (69%), Gaps = 8/189 (4%)

Query: 90  VSTYQTSSKKIDIPSGRVGVIIGKGGETIKSLQLRSGAKIQVTRDMDADPNSPNRLVELM 149
           V   Q+++++ID+PS +VG +IGKGGE ++ LQ+ SGAKIQ+ RD +ADP+S  R VE++
Sbjct: 226 VDDTQSTTRRIDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEII 285

Query: 150 GSPEAIADAEKLINEVLAEAESGGSGMIGRRLTGQSGSADEFSMQIPNNKVGLIIGKGGE 209
           G+   I  AEKLIN V+AE E+GG   +  R     G  ++  +++P++KVG+IIG+GGE
Sbjct: 286 GTVSCIEKAEKLINAVIAEVEAGGVPALAAR-----GVPEQMEIKVPSDKVGVIIGRGGE 340

Query: 210 TIKSMQAESGARIQVIPLHLPPGDPSTERTLKIDGSPEQIESAKQLVNQIINGENRPR-N 268
           TIK+MQ +S ARIQ+IP +   GD S ERT++I G   QI+ A  L+  ++  + RP   
Sbjct: 341 TIKNMQTKSRARIQLIPQNE--GDASKERTVRISGDKRQIDIATALIKDVMYQDGRPSPY 398

Query: 269 SGGYSQQGY 277
           SGG++QQ Y
Sbjct: 399 SGGFNQQAY 407


>AT5G04430.2 | Symbols: BTR1, BTR1L | binding to TOMV RNA 1L (long
           form) | chr5:1250602-1253523 REVERSE LENGTH=334
          Length = 334

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 22/156 (14%)

Query: 108 GVIIGKGGETIKSLQLRSGAKIQVTRDMDADPNSPNRLVELMGSPEAIADAEKLINEVL- 166
           G +IGKGG TI   Q +SGA+IQ++R+ +  P + +R++ + GS + + +  +LI + L 
Sbjct: 47  GSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLH 106

Query: 167 --AEAESGGSGMIGRRLTGQSGSADEFSMQIPNNKVGLIIGKGGETIKSMQAESGARIQV 224
               AE G      RR+           + +PN+  G IIGKGG TIKS   ES A I++
Sbjct: 107 SELHAEDGNEVEPRRRI----------RLVVPNSSCGGIIGKGGATIKSFIEESKAGIKI 156

Query: 225 IPLHLPPGDPS----TERTLKIDGSPEQIESAKQLV 256
            PL     D +    ++R + + G+ E+   A  L+
Sbjct: 157 SPL-----DNTFYGLSDRLVTLSGTFEEQMRAIDLI 187


>AT5G04430.1 | Symbols: BTR1, BTR1S | binding to TOMV RNA 1L (long
           form) | chr5:1250602-1253523 REVERSE LENGTH=313
          Length = 313

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 13/123 (10%)

Query: 108 GVIIGKGGETIKSLQLRSGAKIQVTRDMDADPNSPNRLVELMGSPEAIADAEKLINEVL- 166
           G +IGKGG TI   Q +SGA+IQ++R+ +  P + +R++ + GS + + +  +LI + L 
Sbjct: 47  GSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLH 106

Query: 167 --AEAESGGSGMIGRRLTGQSGSADEFSMQIPNNKVGLIIGKGGETIKSMQAESGARIQV 224
               AE G      RR+           + +PN+  G IIGKGG TIKS   ES A I++
Sbjct: 107 SELHAEDGNEVEPRRRI----------RLVVPNSSCGGIIGKGGATIKSFIEESKAGIKI 156

Query: 225 IPL 227
            PL
Sbjct: 157 SPL 159



 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 31/188 (16%)

Query: 99  KIDIPSGRVGVIIGKGGETIKSLQLRSGAKIQVTRDMDADPNSPNRLVELMGSPEAIADA 158
           ++ +P+   G IIGKGG TIKS    S A I+++   +      +RLV L G+ E    A
Sbjct: 124 RLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRA 183

Query: 159 EKLINEVLAEAES----------------------GGSGMIGRRLTGQSGSADEFSMQIP 196
             LI   L E +                        GSG  G+    +  ++   ++ + 
Sbjct: 184 IDLILAKLTEDDHYSQNVHSPYSYAAGYNSVNYAPNGSG--GKYQNHKEEASTTVTIGVA 241

Query: 197 NNKVGLIIGKGGETIKSMQAESGARIQVIPLHLPPGDP---STERTLKIDGSPEQIESAK 253
           +  +GL++G+GG  I  +   +GARI++       GD    +T+R + I G    I+ A+
Sbjct: 242 DEHIGLVLGRGGRNIMEITQMTGARIKI----SDRGDFMSGTTDRKVSITGPQRAIQQAE 297

Query: 254 QLVNQIIN 261
            ++ Q ++
Sbjct: 298 TMIKQKVD 305


>AT5G15270.1 | Symbols:  | RNA-binding KH domain-containing protein
           | chr5:4958738-4960947 FORWARD LENGTH=548
          Length = 548

 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 99/188 (52%), Gaps = 24/188 (12%)

Query: 102 IPSGRVGVIIGKGGETIKSLQLRSGAKIQVTRDMDADPNSPNRLVELMG---SPEAIADA 158
            P  ++G +IG+GG+ +K L+  + +KI++    +A P    R++ +        A  D 
Sbjct: 56  CPVKKIGSVIGRGGDIVKQLRNDTRSKIRIG---EAIPGCDERVITIYSPSDETNAFGDG 112

Query: 159 EKLINEVLAEAESGGSGMIGRRLTGQSGSADE--------FSMQIPNNKVGLIIGKGGET 210
           EK    VL+ A+     +  R +   + S D           + +P++++G I+G+GG+ 
Sbjct: 113 EK----VLSPAQDALFRIHDRVVADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQI 168

Query: 211 IKSMQAESGARIQVIP-LHLPPGDPSTERTLKIDGSPEQIESA-KQLVNQIINGENRPRN 268
           ++++++E+GA+I+++   ++P    +++  ++I G    ++ A  Q+ +++    +R +N
Sbjct: 169 VQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQN 228

Query: 269 ----SGGY 272
               SGGY
Sbjct: 229 LLSSSGGY 236


>AT5G15270.2 | Symbols:  | RNA-binding KH domain-containing protein
           | chr5:4958738-4960947 FORWARD LENGTH=548
          Length = 548

 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 99/188 (52%), Gaps = 24/188 (12%)

Query: 102 IPSGRVGVIIGKGGETIKSLQLRSGAKIQVTRDMDADPNSPNRLVELMG---SPEAIADA 158
            P  ++G +IG+GG+ +K L+  + +KI++    +A P    R++ +        A  D 
Sbjct: 56  CPVKKIGSVIGRGGDIVKQLRNDTRSKIRIG---EAIPGCDERVITIYSPSDETNAFGDG 112

Query: 159 EKLINEVLAEAESGGSGMIGRRLTGQSGSADE--------FSMQIPNNKVGLIIGKGGET 210
           EK    VL+ A+     +  R +   + S D           + +P++++G I+G+GG+ 
Sbjct: 113 EK----VLSPAQDALFRIHDRVVADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQI 168

Query: 211 IKSMQAESGARIQVIP-LHLPPGDPSTERTLKIDGSPEQIESA-KQLVNQIINGENRPRN 268
           ++++++E+GA+I+++   ++P    +++  ++I G    ++ A  Q+ +++    +R +N
Sbjct: 169 VQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQN 228

Query: 269 ----SGGY 272
               SGGY
Sbjct: 229 LLSSSGGY 236


>AT3G04610.1 | Symbols: FLK | RNA-binding KH domain-containing
           protein | chr3:1250762-1254272 REVERSE LENGTH=577
          Length = 577

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 4/159 (2%)

Query: 99  KIDIPSGRVGVIIGKGGETIKSLQLRSGAKIQVTRDMDADPNSPNRLVELMGSPEAIADA 158
           ++ +P+ +VG IIG+ G+ IK +   + A+I++   +D  P +  R V + G  E  +  
Sbjct: 190 RMLVPAQKVGSIIGRKGDVIKKIVEETRARIKI---LDGPPGTTERAVMVSGKEEPESSL 246

Query: 159 EKLINEVLAEAESGGSGMIGRRLTGQSGSADEFSMQIPNNKVGLIIGKGGETIKSMQAES 218
              ++ +L        G+ G        S     + +P ++ G +IGK G T+K++Q  S
Sbjct: 247 PPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEAS 306

Query: 219 GARIQVI-PLHLPPGDPSTERTLKIDGSPEQIESAKQLV 256
              ++V+    LP      +R +++ G P  +  A +L+
Sbjct: 307 ACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELI 345


>AT1G14170.3 | Symbols:  | RNA-binding KH domain-containing protein
           | chr1:4843463-4845253 REVERSE LENGTH=479
          Length = 479

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)

Query: 103 PSGRVGVIIGKGGETIKSLQLRSGAKIQVTRDMDADPNSPNRLVELMGSPEAI------- 155
           P  + G IIGKGGE  K  Q+RS  K  + R  +A P    R+V +  + E +       
Sbjct: 51  PVKKTGSIIGKGGEIAK--QIRSETKSNM-RINEALPGCEERVVTMYSTNEELNHFGDDG 107

Query: 156 ------ADAEKLINEVLAEAESGGSGMIGRRLTGQSGSADEFSMQIPNNKVGLIIGKGGE 209
                  DA   +++++        G       G+  +     M +P++++G +IGKGG+
Sbjct: 108 ELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTV-TVRMLVPSDQIGCVIGKGGQ 166

Query: 210 TIKSMQAESGARIQVIPLHLPPG--DPSTERTLKIDGSPEQIESA 252
            I++++ ++ A+I+VI  HLP      S +  L I G P  +  A
Sbjct: 167 VIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREA 211


>AT1G14170.1 | Symbols:  | RNA-binding KH domain-containing protein
           | chr1:4843463-4845253 REVERSE LENGTH=454
          Length = 454

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)

Query: 103 PSGRVGVIIGKGGETIKSLQLRSGAKIQVTRDMDADPNSPNRLVELMGSPEAI------- 155
           P  + G IIGKGGE  K  Q+RS  K  + R  +A P    R+V +  + E +       
Sbjct: 26  PVKKTGSIIGKGGEIAK--QIRSETKSNM-RINEALPGCEERVVTMYSTNEELNHFGDDG 82

Query: 156 ------ADAEKLINEVLAEAESGGSGMIGRRLTGQSGSADEFSMQIPNNKVGLIIGKGGE 209
                  DA   +++++        G       G+  +     M +P++++G +IGKGG+
Sbjct: 83  ELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTV-TVRMLVPSDQIGCVIGKGGQ 141

Query: 210 TIKSMQAESGARIQVIPLHLPPG--DPSTERTLKIDGSPEQIESA 252
            I++++ ++ A+I+VI  HLP      S +  L I G P  +  A
Sbjct: 142 VIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREA 186


>AT1G14170.2 | Symbols:  | RNA-binding KH domain-containing protein
           | chr1:4843463-4845253 REVERSE LENGTH=446
          Length = 446

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 19/165 (11%)

Query: 103 PSGRVGVIIGKGGETIKSLQLRSGAKIQVTRDMDADPNSPNRLVELMGSPEAI------- 155
           P  + G IIGKGGE  K  Q+RS  K  + R  +A P    R+V +  + E +       
Sbjct: 18  PVKKTGSIIGKGGEIAK--QIRSETKSNM-RINEALPGCEERVVTMYSTNEELNHFGDDG 74

Query: 156 ------ADAEKLINEVLAEAESGGSGMIGRRLTGQSGSADEFSMQIPNNKVGLIIGKGGE 209
                  DA   +++++        G       G+  +     M +P++++G +IGKGG+
Sbjct: 75  ELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTV-TVRMLVPSDQIGCVIGKGGQ 133

Query: 210 TIKSMQAESGARIQVIPLHLPPG--DPSTERTLKIDGSPEQIESA 252
            I++++ ++ A+I+VI  HLP      S +  L I G P  +  A
Sbjct: 134 VIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREA 178


>AT5G06770.1 | Symbols:  | KH domain-containing protein / zinc
           finger (CCCH type) family protein | chr5:2090937-2092787
           REVERSE LENGTH=240
          Length = 240

 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 3/80 (3%)

Query: 89  PVSTYQTSSKKIDIPSGRVGVIIGKGGETIKSLQLRSGAKIQVTRDMDADPNSPNRLVEL 148
           PVS +  S+ KI + +   G IIGKGG   K +   +GAK+ + +D + DPN   +++EL
Sbjct: 107 PVSIFGASTSKISVDASLAGAIIGKGGIHSKQICRETGAKLSI-KDHERDPNL--KIIEL 163

Query: 149 MGSPEAIADAEKLINEVLAE 168
            G+ E I  A  ++ E++  
Sbjct: 164 EGTFEQINVASGMVRELIGR 183


>AT5G64390.2 | Symbols: HEN4 | RNA-binding KH domain-containing
           protein | chr5:25743442-25746742 FORWARD LENGTH=824
          Length = 824

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 48/191 (25%)

Query: 99  KIDIPSGRVGVIIGKGGETIKSLQLRSGAKIQVTRDMDADP--NSPNRLVELMGSPEAIA 156
           ++  P   VG +IGK G  IK LQ  +GAKI+V      +P   SP+R++ ++   ++ +
Sbjct: 50  RLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRV-----EEPPSGSPDRVITIIAQADSKS 104

Query: 157 DAE-------------------------KLIN--EVLAEAESGGSGMIGRRLTGQSGSAD 189
             +                          LI   E+LA AE+    ++ R LT  S +  
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLA-AEADSDTVVCRLLTESSHA-- 161

Query: 190 EFSMQIPNNKVGLIIGKGGETIKSMQAESGARIQVIPLHLPPGDPSTERTLKIDGSPEQI 249
                      G +IGKGG+ + S++ E+G +I +   +LP    + +  ++++G+   +
Sbjct: 162 -----------GAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAV 210

Query: 250 ESAKQLVNQII 260
           + A   +++ +
Sbjct: 211 KKALVSISRCL 221


>AT5G64390.1 | Symbols: HEN4 | RNA-binding KH domain-containing
           protein | chr5:25743442-25747380 FORWARD LENGTH=857
          Length = 857

 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 48/191 (25%)

Query: 99  KIDIPSGRVGVIIGKGGETIKSLQLRSGAKIQVTRDMDADP--NSPNRLVELMGSPEAIA 156
           ++  P   VG +IGK G  IK LQ  +GAKI+V      +P   SP+R++ ++   ++ +
Sbjct: 50  RLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRV-----EEPPSGSPDRVITIIAQADSKS 104

Query: 157 DAEK-------------------------LIN--EVLAEAESGGSGMIGRRLTGQSGSAD 189
             +                          LI   E+LA AE+    ++ R LT  S +  
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLA-AEADSDTVVCRLLTESSHA-- 161

Query: 190 EFSMQIPNNKVGLIIGKGGETIKSMQAESGARIQVIPLHLPPGDPSTERTLKIDGSPEQI 249
                      G +IGKGG+ + S++ E+G +I +   +LP    + +  ++++G+   +
Sbjct: 162 -----------GAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAV 210

Query: 250 ESAKQLVNQII 260
           + A   +++ +
Sbjct: 211 KKALVSISRCL 221


>AT5G64390.3 | Symbols: HEN4 | RNA-binding KH domain-containing
           protein | chr5:25743442-25747380 FORWARD LENGTH=866
          Length = 866

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 48/191 (25%)

Query: 99  KIDIPSGRVGVIIGKGGETIKSLQLRSGAKIQVTRDMDADP--NSPNRLVELMGSPEAIA 156
           ++  P   VG +IGK G  IK LQ  +GAKI+V      +P   SP+R++ ++   ++ +
Sbjct: 50  RLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRV-----EEPPSGSPDRVITIIAQADSKS 104

Query: 157 DAEK-------------------------LIN--EVLAEAESGGSGMIGRRLTGQSGSAD 189
             +                          LI   E+LA AE+    ++ R LT  S +  
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLA-AEADSDTVVCRLLTESSHA-- 161

Query: 190 EFSMQIPNNKVGLIIGKGGETIKSMQAESGARIQVIPLHLPPGDPSTERTLKIDGSPEQI 249
                      G +IGKGG+ + S++ E+G +I +   +LP    + +  ++++G+   +
Sbjct: 162 -----------GAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAV 210

Query: 250 ESAKQLVNQII 260
           + A   +++ +
Sbjct: 211 KKALVSISRCL 221