Miyakogusa Predicted Gene

Lj1g3v1785760.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1785760.1 tr|A9TUC6|A9TUC6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_150936,39.34,5e-19,
,NODE_84813_length_665_cov_15.273685.path1.1
         (125 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G56260.1 | Symbols:  | unknown protein; Has 32 Blast hits to ...   139   4e-34

>AT1G56260.1 | Symbols:  | unknown protein; Has 32 Blast hits to 32
           proteins in 16 species: Archae - 0; Bacteria - 0;
           Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other
           Eukaryotes - 2 (source: NCBI BLink). |
           chr1:21064647-21065577 REVERSE LENGTH=127
          Length = 127

 Score =  139 bits (350), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 62/116 (53%), Positives = 93/116 (80%), Gaps = 1/116 (0%)

Query: 1   MAFFEVKSGALVSLQDLHPSSPFFKQGASIRIIGKLREYSIETGLAIVVDGDSILKVSTE 60
           MA  +++ G  ++LQ+L+PSS F+K+G S+R+   LR YS+ET + ++ DG   LK++T+
Sbjct: 1   MAKSQIEPGVPITLQELYPSSLFYKEGVSLRVTAMLRGYSVETAIGVIEDGGRSLKINTQ 60

Query: 61  HLRDLTFQVGSVYQFIGELLI-QPDNEGVLQARVGRNVDGIDLNLYHQSLLLLKQF 115
           ++RD++F+VGS+YQFIGEL I QP+NE +LQAR GRNVDGID+NLY +++ LL+QF
Sbjct: 61  NIRDVSFRVGSIYQFIGELHIEQPNNEAILQARTGRNVDGIDMNLYRKTIELLRQF 116