Miyakogusa Predicted Gene
- Lj1g3v1785740.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1785740.2 Non Chatacterized Hit- tr|B6U701|B6U701_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2
SV=1,55.95,2e-18,DUF1639,Protein of unknown function DUF1639;
seg,NULL,CUFF.27915.2
(297 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G55340.1 | Symbols: | Protein of unknown function (DUF1639) ... 139 3e-33
AT1G55340.2 | Symbols: | Protein of unknown function (DUF1639) ... 139 3e-33
AT3G03880.1 | Symbols: | Protein of unknown function (DUF1639) ... 110 1e-24
AT4G20300.2 | Symbols: | Protein of unknown function (DUF1639) ... 102 4e-22
AT4G20300.1 | Symbols: | Protein of unknown function (DUF1639) ... 89 3e-18
AT3G60410.3 | Symbols: | Protein of unknown function (DUF1639) ... 60 2e-09
AT3G60410.2 | Symbols: | Protein of unknown function (DUF1639) ... 60 2e-09
AT3G60410.1 | Symbols: | Protein of unknown function (DUF1639) ... 60 2e-09
AT1G25370.1 | Symbols: | Protein of unknown function (DUF1639) ... 59 5e-09
AT1G68340.1 | Symbols: | Protein of unknown function (DUF1639) ... 49 5e-06
>AT1G55340.1 | Symbols: | Protein of unknown function (DUF1639) |
chr1:20652605-20653469 FORWARD LENGTH=205
Length = 205
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/85 (81%), Positives = 75/85 (88%), Gaps = 1/85 (1%)
Query: 213 VWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYE 272
VWP K IAL+NKEKEEDFLA+KG KLPQRPKKRAK VQ+TL LVSPGAWL DL ERYE
Sbjct: 122 VWP-KLYIALSNKEKEEDFLAMKGCKLPQRPKKRAKLVQKTLLLVSPGAWLSDLCKERYE 180
Query: 273 VREKKVTKKRPRGLKAMGNMESESE 297
VREKK +KKRPRGLKAMG+MES+SE
Sbjct: 181 VREKKTSKKRPRGLKAMGSMESDSE 205
>AT1G55340.2 | Symbols: | Protein of unknown function (DUF1639) |
chr1:20652605-20653469 FORWARD LENGTH=195
Length = 195
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/85 (81%), Positives = 75/85 (88%), Gaps = 1/85 (1%)
Query: 213 VWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYE 272
VWP K IAL+NKEKEEDFLA+KG KLPQRPKKRAK VQ+TL LVSPGAWL DL ERYE
Sbjct: 112 VWP-KLYIALSNKEKEEDFLAMKGCKLPQRPKKRAKLVQKTLLLVSPGAWLSDLCKERYE 170
Query: 273 VREKKVTKKRPRGLKAMGNMESESE 297
VREKK +KKRPRGLKAMG+MES+SE
Sbjct: 171 VREKKTSKKRPRGLKAMGSMESDSE 195
>AT3G03880.1 | Symbols: | Protein of unknown function (DUF1639) |
chr3:998123-999029 FORWARD LENGTH=193
Length = 193
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 68/86 (79%), Gaps = 2/86 (2%)
Query: 213 VWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYE 272
+WP K I L+NKEKEEDF+A+KG K RPKKRAK +QR+L LVSPG WL DL +RY+
Sbjct: 109 MWP-KLFITLSNKEKEEDFMAMKGCKPSHRPKKRAKLIQRSLLLVSPGTWLADLCPDRYD 167
Query: 273 VREKKVTKK-RPRGLKAMGNMESESE 297
VR KK +KK R RGLKAMGNME++S+
Sbjct: 168 VRVKKSSKKRRARGLKAMGNMETDSD 193
>AT4G20300.2 | Symbols: | Protein of unknown function (DUF1639) |
chr4:10955813-10958865 FORWARD LENGTH=352
Length = 352
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 3/92 (3%)
Query: 208 DAAPPVWPPKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLT 267
+ A WP + IAL+ KEKEEDFL +KG+KLP RP+KRAK + + L PG WL DLT
Sbjct: 262 EKATQEWP-RIYIALSRKEKEEDFLVMKGTKLPHRPRKRAKNIDKALQFCFPGMWLSDLT 320
Query: 268 LERYEVREKKVTKKRP--RGLKAMGNMESESE 297
RYEVREKK KK+ RGLK M NM+++SE
Sbjct: 321 KNRYEVREKKNVKKQQKRRGLKGMENMDTDSE 352
>AT4G20300.1 | Symbols: | Protein of unknown function (DUF1639) |
chr4:10955813-10958287 FORWARD LENGTH=339
Length = 339
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 48/66 (72%)
Query: 216 PKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYEVRE 275
P+ IAL+ KEKEEDFL +KG+KLP RP+KRAK + + L PG WL DLT RYEVRE
Sbjct: 269 PRIYIALSRKEKEEDFLVMKGTKLPHRPRKRAKNIDKALQFCFPGMWLSDLTKNRYEVRE 328
Query: 276 KKVTKK 281
KK KK
Sbjct: 329 KKNVKK 334
>AT3G60410.3 | Symbols: | Protein of unknown function (DUF1639) |
chr3:22331612-22332680 FORWARD LENGTH=324
Length = 324
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%)
Query: 216 PKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYEVRE 275
P+ I+L+ E +ED A+ GSK +RPKKRAK VQ+ L+++ PG W+ +++ E Y+V E
Sbjct: 263 PRLSISLSKLEIDEDIYALTGSKPSRRPKKRAKNVQKQLDVLFPGLWMGNVSSEAYKVSE 322
>AT3G60410.2 | Symbols: | Protein of unknown function (DUF1639) |
chr3:22331612-22332680 FORWARD LENGTH=324
Length = 324
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%)
Query: 216 PKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYEVRE 275
P+ I+L+ E +ED A+ GSK +RPKKRAK VQ+ L+++ PG W+ +++ E Y+V E
Sbjct: 263 PRLSISLSKLEIDEDIYALTGSKPSRRPKKRAKNVQKQLDVLFPGLWMGNVSSEAYKVSE 322
>AT3G60410.1 | Symbols: | Protein of unknown function (DUF1639) |
chr3:22331612-22332680 FORWARD LENGTH=324
Length = 324
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%)
Query: 216 PKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYEVRE 275
P+ I+L+ E +ED A+ GSK +RPKKRAK VQ+ L+++ PG W+ +++ E Y+V E
Sbjct: 263 PRLSISLSKLEIDEDIYALTGSKPSRRPKKRAKNVQKQLDVLFPGLWMGNVSSEAYKVSE 322
>AT1G25370.1 | Symbols: | Protein of unknown function (DUF1639) |
chr1:8898046-8898934 REVERSE LENGTH=263
Length = 263
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%)
Query: 216 PKFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYEVRE 275
P F + L+ KE EEDF+ + G + P+RPKKR+K VQ+ L+ + PG +L ++T + Y+V E
Sbjct: 204 PMFSMKLSKKEMEEDFIGMVGHRAPRRPKKRSKTVQKKLDSLFPGLYLTEVTHDAYKVPE 263
>AT1G68340.1 | Symbols: | Protein of unknown function (DUF1639) |
chr1:25614440-25615335 REVERSE LENGTH=246
Length = 246
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 40/57 (70%)
Query: 217 KFVIALTNKEKEEDFLAIKGSKLPQRPKKRAKFVQRTLNLVSPGAWLCDLTLERYEV 273
+ + L+ KE EED++ + G K P+RPKKR++ VQ+ ++L++ +++ ++T + Y V
Sbjct: 181 RLLYTLSKKEIEEDYMMMIGLKPPRRPKKRSRTVQKQIDLLNFASYITEITEDLYNV 237