Miyakogusa Predicted Gene

Lj1g3v1780050.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1780050.1 Non Chatacterized Hit- tr|J3NF66|J3NF66_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB12G2,46.81,0.0000000000003,seg,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL,CUFF.27784.1
         (412 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G06590.1 | Symbols:  | unknown protein; Has 380 Blast hits to...   540   e-154

>AT1G06590.1 | Symbols:  | unknown protein; Has 380 Blast hits to
           268 proteins in 109 species: Archae - 0; Bacteria - 0;
           Metazoa - 245; Fungi - 73; Plants - 49; Viruses - 0;
           Other Eukaryotes - 13 (source: NCBI BLink). |
           chr1:2016504-2024505 REVERSE LENGTH=916
          Length = 916

 Score =  540 bits (1390), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 276/412 (66%), Positives = 328/412 (79%)

Query: 1   MKLSTCPVNVCKELRLSSHLISDFSSESSAMTIDGAFSTAWLRNLQKPTGSLVLCQENGS 60
           M+  TCPV+VCKE+RL +HLISDFSSESS MTIDG+ S+AWL++LQKP G  V+  ++GS
Sbjct: 498 MRHKTCPVSVCKEIRLGAHLISDFSSESSTMTIDGSLSSAWLKDLQKPWGPPVISPDSGS 557

Query: 61  GSSSNVSQFCAQPTSIPGSVLQVLGSSCILRATAWELYGSSPLSRINVLVHATCFXXXXX 120
             SS   Q C    SIPGSV Q++G+S +LRAT+WELYGS+P++R+N LV+AT F     
Sbjct: 558 RKSSTFFQLCDHLVSIPGSVSQLIGASYLLRATSWELYGSAPMARMNTLVYATLFGDSSS 617

Query: 121 XXXXXLAYVKLIQHLAVFKGYKEAFSALKVAEEKFLFVSKSXXXXXXXXXXXXXXXXRGR 180
                LAY+KLIQHLA++KGYK+AF+ALKVAEEKFL VSKS                 G 
Sbjct: 618 SSDAELAYLKLIQHLALYKGYKDAFAALKVAEEKFLTVSKSKVLLLKLQLLHERALHCGN 677

Query: 181 LKLAQKLCDELSVLASPVTGVDMELKTEASLRHARTLLAAKQFREAAAVAHSLFCMCYKY 240
           LKLAQ++C+EL  LAS   GVDMELK EASLR ARTLLAAKQ+ +AA VAHSLFC C+K+
Sbjct: 678 LKLAQRICNELGGLASTAMGVDMELKVEASLREARTLLAAKQYSQAANVAHSLFCTCHKF 737

Query: 241 NLQVQNASVLLLLAEIHKKSGNAVLGIPYALASLSFCTSFNLDLLKASATLTLAELWLSL 300
           NLQ++ ASVLLLLAEIHKKSGNAVLG+PYALAS+SFC SFNLDLLKASATLTLAELWL L
Sbjct: 738 NLQIEKASVLLLLAEIHKKSGNAVLGLPYALASISFCQSFNLDLLKASATLTLAELWLGL 797

Query: 301 GSNHATRALNLVHGAFPMILGHGGLELCSRAYIVEAKCYLCDTNFNIFEDHNIVIDSLRQ 360
           GSNH  RAL+L+HGAFPMILGHGGLEL +RAYI EA CYL D + ++  D + V+DSLRQ
Sbjct: 798 GSNHTKRALDLLHGAFPMILGHGGLELRARAYIFEANCYLSDPSSSVSTDSDTVLDSLRQ 857

Query: 361 ASEELQLLEFHELAAEAFYLMAMVYDKLGQFEEREEAAASFQKHTLALTNPQ 412
           AS+ELQ LE+HELAAEA YLMAMVYDKLG+ +EREEAA+ F+KH +AL NPQ
Sbjct: 858 ASDELQALEYHELAAEASYLMAMVYDKLGRLDEREEAASLFKKHIIALENPQ 909