Miyakogusa Predicted Gene
- Lj1g3v1779030.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1779030.1 tr|K2FPL8|K2FPL8_9BACT Glycosyl transferase
family 2 OS=uncultured bacterium PE=4 SV=1,26.74,0.0002,no
description,NULL,CUFF.27806.1
(244 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G65810.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 343 5e-95
AT3G49720.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 340 4e-94
AT3G49720.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 340 4e-94
>AT5G65810.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G49720.2); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
0; Other Eukaryotes - 2996 (source: NCBI BLink). |
chr5:26337833-26339144 REVERSE LENGTH=258
Length = 258
Score = 343 bits (881), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 171/254 (67%), Positives = 200/254 (78%), Gaps = 14/254 (5%)
Query: 1 MSRRPGNPSRRFGDS----------SKSRSSPILSVGLIVLGSLFLIAYFYRGSGGLGSH 50
MSRR RR GDS SKSRSSP+LSV L+++G+ LI Y Y G G S
Sbjct: 1 MSRRQ---VRRVGDSGSFPFVGALHSKSRSSPLLSVCLVLVGACLLIGYAYSGPGMFKS- 56
Query: 51 LDSVSRVEGDYLCSGEVQRAIPILQKAYGDSMHKVLHVGPDTCYVVSKLLKEDETEAWGI 110
+ VS++ GDY C+ EVQRAIPIL+ AYGDSM KVLHVGP+TC VVS LL E+ETEAWG+
Sbjct: 57 IREVSKITGDYSCTAEVQRAIPILKSAYGDSMRKVLHVGPETCSVVSSLLNEEETEAWGV 116
Query: 111 EPYDIEDADSNCKSLIRRGSVRVADIKFPLPYRPKSFSLVIVSDTLDYLSPRYLNKTLPD 170
EPYD+EDADSNCKSL+ +G VRVADIKFPLPYR KSFSLVIVSD LDYLSPRYLNKT+P+
Sbjct: 117 EPYDVEDADSNCKSLLHKGLVRVADIKFPLPYRSKSFSLVIVSDALDYLSPRYLNKTVPE 176
Query: 171 LVRVSADGLVIFTGFPTNQKAKVADVSKFGRAAKMRSSSWWVKYFLQTNLEENEAAYKKF 230
L RV++DG+V+ G P QKAK ++SKFGR AKMRSSSWW+++F QTNLEENEAA KKF
Sbjct: 177 LARVASDGVVLLAGNPGQQKAKGGELSKFGRPAKMRSSSWWIRFFSQTNLEENEAASKKF 236
Query: 231 EQASTKSSYVPKCQ 244
EQA++KSSY P CQ
Sbjct: 237 EQAASKSSYKPACQ 250
>AT3G49720.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, Golgi apparatus, plasma membrane,
membrane; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G65810.1);
Has 64 Blast hits to 64 proteins in 11 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr3:18440192-18441655 REVERSE LENGTH=261
Length = 261
Score = 340 bits (873), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 165/254 (64%), Positives = 199/254 (78%), Gaps = 11/254 (4%)
Query: 1 MSRRPGNPSRRFGDS----------SKSRSSPILSVGLIVLGSLFLIAYFYRGSGGLGSH 50
M+RR +RR GD SKSRSSP+LS+ L+++G+ LI Y Y G G S
Sbjct: 1 MARRQVGSTRRVGDGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKS- 59
Query: 51 LDSVSRVEGDYLCSGEVQRAIPILQKAYGDSMHKVLHVGPDTCYVVSKLLKEDETEAWGI 110
+ VS+V GDY C+ EVQRAIP+L+KAYGD M KVLHVGPDTC VVS LLKE+ETEAWG+
Sbjct: 60 IKEVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGV 119
Query: 111 EPYDIEDADSNCKSLIRRGSVRVADIKFPLPYRPKSFSLVIVSDTLDYLSPRYLNKTLPD 170
EPYDIEDADS+CKS + +G VRVADIKFPLPYR KSFSLVIVSD LDYLSP+YLNKT+P+
Sbjct: 120 EPYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPE 179
Query: 171 LVRVSADGLVIFTGFPTNQKAKVADVSKFGRAAKMRSSSWWVKYFLQTNLEENEAAYKKF 230
L RV++DG+V+F G P Q+AKVA++SKFGR AKMRS+SWW ++F+QTNLEEN+A KKF
Sbjct: 180 LARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKF 239
Query: 231 EQASTKSSYVPKCQ 244
EQA +K Y P CQ
Sbjct: 240 EQAVSKGLYKPACQ 253
>AT3G49720.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, Golgi apparatus, plasma membrane,
membrane; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G65810.1);
Has 64 Blast hits to 64 proteins in 11 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr3:18440192-18441655 REVERSE LENGTH=261
Length = 261
Score = 340 bits (873), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 165/254 (64%), Positives = 199/254 (78%), Gaps = 11/254 (4%)
Query: 1 MSRRPGNPSRRFGDS----------SKSRSSPILSVGLIVLGSLFLIAYFYRGSGGLGSH 50
M+RR +RR GD SKSRSSP+LS+ L+++G+ LI Y Y G G S
Sbjct: 1 MARRQVGSTRRVGDGGSFPFAGALHSKSRSSPLLSICLVLVGACLLIGYAYSGPGIFKS- 59
Query: 51 LDSVSRVEGDYLCSGEVQRAIPILQKAYGDSMHKVLHVGPDTCYVVSKLLKEDETEAWGI 110
+ VS+V GDY C+ EVQRAIP+L+KAYGD M KVLHVGPDTC VVS LLKE+ETEAWG+
Sbjct: 60 IKEVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLLKEEETEAWGV 119
Query: 111 EPYDIEDADSNCKSLIRRGSVRVADIKFPLPYRPKSFSLVIVSDTLDYLSPRYLNKTLPD 170
EPYDIEDADS+CKS + +G VRVADIKFPLPYR KSFSLVIVSD LDYLSP+YLNKT+P+
Sbjct: 120 EPYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPE 179
Query: 171 LVRVSADGLVIFTGFPTNQKAKVADVSKFGRAAKMRSSSWWVKYFLQTNLEENEAAYKKF 230
L RV++DG+V+F G P Q+AKVA++SKFGR AKMRS+SWW ++F+QTNLEEN+A KKF
Sbjct: 180 LARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSKKF 239
Query: 231 EQASTKSSYVPKCQ 244
EQA +K Y P CQ
Sbjct: 240 EQAVSKGLYKPACQ 253