Miyakogusa Predicted Gene

Lj1g3v1768990.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1768990.1 Non Chatacterized Hit- tr|I1J3Z0|I1J3Z0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,38.04,6e-16,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; AP2,AP2/ERF
domain,CUFF.27793.1
         (333 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G37750.1 | Symbols: ANT, DRG, CKC, CKC1 | Integrase-type DNA-...   184   9e-47
AT1G72570.1 | Symbols:  | Integrase-type DNA-binding superfamily...   108   7e-24
AT3G20840.1 | Symbols: PLT1 | Integrase-type DNA-binding superfa...   101   8e-22
AT1G51190.1 | Symbols: PLT2 | Integrase-type DNA-binding superfa...    99   4e-21
AT5G17430.1 | Symbols: BBM | Integrase-type DNA-binding superfam...    97   2e-20
AT5G57390.1 | Symbols: AIL5, CHO1, EMK | AINTEGUMENTA-like 5 | c...    97   2e-20
AT5G10510.2 | Symbols: AIL6 | AINTEGUMENTA-like 6 | chr5:3315991...    96   3e-20
AT5G10510.3 | Symbols: AIL6 | AINTEGUMENTA-like 6 | chr5:3315991...    94   1e-19
AT5G10510.1 | Symbols: AIL6, PLT3 | AINTEGUMENTA-like 6 | chr5:3...    94   1e-19
AT5G65510.1 | Symbols: AIL7 | AINTEGUMENTA-like 7 | chr5:2618582...    94   1e-19
AT2G41710.1 | Symbols:  | Integrase-type DNA-binding superfamily...    67   2e-11
AT2G41710.2 | Symbols:  | Integrase-type DNA-binding superfamily...    67   2e-11
AT1G79700.1 | Symbols:  | Integrase-type DNA-binding superfamily...    67   2e-11
AT1G79700.2 | Symbols:  | Integrase-type DNA-binding superfamily...    67   3e-11
AT1G16060.1 | Symbols: ADAP | ARIA-interacting double AP2 domain...    66   4e-11
AT3G54320.1 | Symbols: WRI1, WRI, ASML1, ATWRI1 | Integrase-type...    60   3e-09
AT3G54320.3 | Symbols: WRI1, WRI, ASML1 | Integrase-type DNA-bin...    60   3e-09
AT2G41710.3 | Symbols:  | Integrase-type DNA-binding superfamily...    50   2e-06

>AT4G37750.1 | Symbols: ANT, DRG, CKC, CKC1 | Integrase-type
           DNA-binding superfamily protein | chr4:17739782-17742189
           FORWARD LENGTH=555
          Length = 555

 Score =  184 bits (466), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 132/314 (42%), Positives = 158/314 (50%), Gaps = 81/314 (25%)

Query: 47  PQASGGSNTVPTTFYGSSGFCYGVGENGNSHSPLTVMPLKSDGSLCIMEALSRSQTPGMV 106
           PQ   G NT       + G CYG   NG  +S ++VMPL+SDGSLC+MEAL+RS      
Sbjct: 56  PQLVVGDNT------SNFGVCYGSNPNGGIYSHMSVMPLRSDGSLCLMEALNRSSHSNHH 109

Query: 107 PTSSPKLEDFLGASMGCHEYGGQESELAMSLSLDSIYYSTQNAGDPHQANRDHSL-ELLS 165
             SSPK+EDF G     H       E AM LSLDS++Y+T      H+ N   +  E  S
Sbjct: 110 QDSSPKVEDFFG----THHNNTSHKE-AMDLSLDSLFYNT-----THEPNTTTNFQEFFS 159

Query: 166 HPYYSGLDCHGMYQSSPLEEENKETGNVTACSSQIVEYSAQHAVEQKMNCNIVNDRXXXX 225
            P           Q+   EEE +  GN         + S  H      N  +  +     
Sbjct: 160 FP-----------QTRNHEEETRNYGN---------DPSLTHG--GSFNVGVYGEFQ--- 194

Query: 226 XXXXXXXXXXELQSRSLSMSPGSQSSCVTGPSQ----------------ISPS------- 262
                       QS SLSMSPGSQSSC+TG                   IS +       
Sbjct: 195 ------------QSLSLSMSPGSQSSCITGSHHHQQNQNQNHQSQNHQQISEALVETSVG 242

Query: 263 -GSDSVAGNGKKRG---AAKMGQKQPMHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWD 318
             + ++A   KKRG      +GQKQ +HRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWD
Sbjct: 243 FETTTMAAAKKKRGQEDVVVVGQKQIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWD 302

Query: 319 NSCKKEGQTRKGRQ 332
           NS KKEG +RKGRQ
Sbjct: 303 NSFKKEGHSRKGRQ 316


>AT1G72570.1 | Symbols:  | Integrase-type DNA-binding superfamily
           protein | chr1:27331381-27333698 FORWARD LENGTH=415
          Length = 415

 Score =  108 bits (269), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 68/93 (73%), Gaps = 2/93 (2%)

Query: 241 SLSMSPGSQSSCVTGPSQISPSGSDSVAGNGK-KRGAAKMGQKQPMHRKSIDTFGQRTSQ 299
           SL++S G+ S  +   S +S    + V  + K KR   K   K+ + RKS+D++GQRTSQ
Sbjct: 165 SLALSHGACSDLI-NESNVSARVEEPVKVDEKRKRLVVKPQVKESVPRKSVDSYGQRTSQ 223

Query: 300 YRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 332
           YRGVTRHRWTGRYEAHLWDNSCKKEGQTR+GRQ
Sbjct: 224 YRGVTRHRWTGRYEAHLWDNSCKKEGQTRRGRQ 256


>AT3G20840.1 | Symbols: PLT1 | Integrase-type DNA-binding
           superfamily protein | chr3:7300764-7303370 FORWARD
           LENGTH=574
          Length = 574

 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 51/96 (53%), Positives = 65/96 (67%), Gaps = 7/96 (7%)

Query: 237 LQSRSLSMSPGSQSSCVTGPSQISPSGSDSVAGNGKKRGAAKMGQKQPMHRKSIDTFGQR 296
           LQS +LSM   + ++ V   S    +G ++  G       A +    P  R+++DTFGQR
Sbjct: 126 LQSLTLSMGTTAGNNVVDKASPSETTGDNASGG-----ALAVVETATP--RRALDTFGQR 178

Query: 297 TSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 332
           TS YRGVTRHRWTGRYEAHLWDNSC++EGQ+RKGRQ
Sbjct: 179 TSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ 214


>AT1G51190.1 | Symbols: PLT2 | Integrase-type DNA-binding
           superfamily protein | chr1:18977517-18980305 FORWARD
           LENGTH=568
          Length = 568

 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 66/98 (67%), Gaps = 5/98 (5%)

Query: 237 LQSRSLSMSPGSQSSCVTGPSQISP--SGSDSVAGNGKKRGAAKMGQKQPMHRKSIDTFG 294
           LQS +LSM     ++      + SP  + +D+ +      G A +   +   R++++TFG
Sbjct: 129 LQSLTLSMGSTGAAAAEVATVKASPAETSADNSSSTTNTSGGAIV---EATPRRTLETFG 185

Query: 295 QRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 332
           QRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ+RKGRQ
Sbjct: 186 QRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ 223


>AT5G17430.1 | Symbols: BBM | Integrase-type DNA-binding superfamily
           protein | chr5:5742542-5745568 REVERSE LENGTH=584
          Length = 584

 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 40/46 (86%), Positives = 45/46 (97%)

Query: 287 RKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 332
           +K+I++FGQRTS YRGVTRHRWTGRYEAHLWDNSCK+EGQTRKGRQ
Sbjct: 198 KKTIESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQ 243


>AT5G57390.1 | Symbols: AIL5, CHO1, EMK | AINTEGUMENTA-like 5 |
           chr5:23253459-23256437 REVERSE LENGTH=558
          Length = 558

 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 38/54 (70%), Positives = 48/54 (88%)

Query: 279 MGQKQPMHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 332
           + +  P  +K++++FGQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ+RKGRQ
Sbjct: 183 VSEASPTPKKNVESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQ 236


>AT5G10510.2 | Symbols: AIL6 | AINTEGUMENTA-like 6 |
           chr5:3315991-3320008 FORWARD LENGTH=581
          Length = 581

 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 40/48 (83%), Positives = 44/48 (91%)

Query: 286 HRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQG 333
           ++K  DTFGQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ RKGRQG
Sbjct: 255 NKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQG 302


>AT5G10510.3 | Symbols: AIL6 | AINTEGUMENTA-like 6 |
           chr5:3315991-3320008 FORWARD LENGTH=604
          Length = 604

 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 40/61 (65%), Positives = 47/61 (77%)

Query: 272 KKRGAAKMGQKQPMHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGR 331
           K++    +      ++K  DTFGQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ RKGR
Sbjct: 241 KEKAVVAVETSDCSNKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGR 300

Query: 332 Q 332
           Q
Sbjct: 301 Q 301


>AT5G10510.1 | Symbols: AIL6, PLT3 | AINTEGUMENTA-like 6 |
           chr5:3316036-3320008 FORWARD LENGTH=569
          Length = 569

 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 39/47 (82%), Positives = 43/47 (91%)

Query: 286 HRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 332
           ++K  DTFGQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ RKGRQ
Sbjct: 240 NKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQ 286


>AT5G65510.1 | Symbols: AIL7 | AINTEGUMENTA-like 7 |
           chr5:26185829-26189413 FORWARD LENGTH=498
          Length = 498

 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 40/61 (65%), Positives = 47/61 (77%)

Query: 272 KKRGAAKMGQKQPMHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGR 331
           KK+  +K        +K ++T GQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ RKGR
Sbjct: 204 KKKTVSKKETSDDSKKKIVETLGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGR 263

Query: 332 Q 332
           Q
Sbjct: 264 Q 264


>AT2G41710.1 | Symbols:  | Integrase-type DNA-binding superfamily
           protein | chr2:17400274-17402903 REVERSE LENGTH=423
          Length = 423

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 33/41 (80%)

Query: 292 TFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 332
           T G+R+S YRGVTRHRWTGRYEAHLWD S   + Q +KG+Q
Sbjct: 63  TAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQ 103


>AT2G41710.2 | Symbols:  | Integrase-type DNA-binding superfamily
           protein | chr2:17400274-17402903 REVERSE LENGTH=428
          Length = 428

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 33/41 (80%)

Query: 292 TFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 332
           T G+R+S YRGVTRHRWTGRYEAHLWD S   + Q +KG+Q
Sbjct: 63  TAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQ 103


>AT1G79700.1 | Symbols:  | Integrase-type DNA-binding superfamily
           protein | chr1:29990440-29993658 REVERSE LENGTH=303
          Length = 303

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/38 (73%), Positives = 32/38 (84%)

Query: 295 QRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 332
           QR+S YRGVTRHRWTGRYEAHLWD +   + QT+KGRQ
Sbjct: 48  QRSSPYRGVTRHRWTGRYEAHLWDKNSWNDTQTKKGRQ 85


>AT1G79700.2 | Symbols:  | Integrase-type DNA-binding superfamily
           protein | chr1:29990440-29993658 REVERSE LENGTH=313
          Length = 313

 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 28/38 (73%), Positives = 32/38 (84%)

Query: 295 QRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 332
           QR+S YRGVTRHRWTGRYEAHLWD +   + QT+KGRQ
Sbjct: 48  QRSSPYRGVTRHRWTGRYEAHLWDKNSWNDTQTKKGRQ 85


>AT1G16060.1 | Symbols: ADAP | ARIA-interacting double AP2 domain
           protein | chr1:5508563-5511609 FORWARD LENGTH=345
          Length = 345

 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 41/65 (63%)

Query: 268 AGNGKKRGAAKMGQKQPMHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQT 327
            G+ +   +  +  K+    +  D   QR+S +RGVTRHRWTGRYEAHLWD +   E QT
Sbjct: 27  TGDDQSATSVVLKAKRKRRSQPRDAPPQRSSVHRGVTRHRWTGRYEAHLWDKNSWNETQT 86

Query: 328 RKGRQ 332
           +KGRQ
Sbjct: 87  KKGRQ 91


>AT3G54320.1 | Symbols: WRI1, WRI, ASML1, ATWRI1 | Integrase-type
           DNA-binding superfamily protein | chr3:20114809-20118599
           FORWARD LENGTH=438
          Length = 438

 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/38 (65%), Positives = 30/38 (78%)

Query: 295 QRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 332
           +R+S YRGVTRHRWTGR+EAHLWD S     Q +KG+Q
Sbjct: 61  RRSSIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGKQ 98


>AT3G54320.3 | Symbols: WRI1, WRI, ASML1 | Integrase-type
           DNA-binding superfamily protein | chr3:20114809-20118473
           FORWARD LENGTH=430
          Length = 430

 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/38 (65%), Positives = 30/38 (78%)

Query: 295 QRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 332
           +R+S YRGVTRHRWTGR+EAHLWD S     Q +KG+Q
Sbjct: 61  RRSSIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGKQ 98


>AT2G41710.3 | Symbols:  | Integrase-type DNA-binding superfamily
           protein | chr2:17400274-17402903 REVERSE LENGTH=458
          Length = 458

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/30 (63%), Positives = 24/30 (80%)

Query: 303 VTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ 332
           ++RHRWTGRYEAHLWD S   + Q +KG+Q
Sbjct: 109 MSRHRWTGRYEAHLWDKSTWNQNQNKKGKQ 138