Miyakogusa Predicted Gene

Lj1g3v1755650.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1755650.1 tr|A8HQX6|A8HQX6_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_146614 PE=4
SV=1,31.92,0.0000000000001,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.27762.1
         (348 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G10150.1 | Symbols:  | Carbohydrate-binding protein | chr1:33...   319   2e-87
AT1G59510.1 | Symbols: CF9 | Carbohydrate-binding protein | chr1...   286   1e-77
AT3G49790.1 | Symbols:  | Carbohydrate-binding protein | chr3:18...   237   1e-62

>AT1G10150.1 | Symbols:  | Carbohydrate-binding protein |
           chr1:3326160-3327404 FORWARD LENGTH=414
          Length = 414

 Score =  319 bits (817), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 164/350 (46%), Positives = 231/350 (66%), Gaps = 20/350 (5%)

Query: 1   MVSNSADTVSLLSHDLNHFLTSDSDEIPNSLKQLSKIAASKEFLETLSRVSESVTLGIVL 60
           ++S+SA+T+S++S D+  FL SDSDEIPNSLKQ++KI  S EF ++LSRVS++VT+G   
Sbjct: 63  LISDSAETLSMVSRDVKDFLNSDSDEIPNSLKQIAKITTSNEFTDSLSRVSQAVTIGAFR 122

Query: 61  GCKSQFNSSGEG------SSFSDKVAEKLMSKAGTXXXXXXXXXXARNFVLAFFSDADSV 114
           G KS+ +    G      SS  D+V +K+ S+AGT          A+N VL F+S     
Sbjct: 123 GYKSESSIGDSGIEKSSDSSVVDRVIDKVFSEAGTGFVSVVVGSFAKNLVLGFYSGKVES 182

Query: 115 GVR---SNSDDVPRWVRVICDERCGKLIGDCVRTFVSTAVAVFLDKTMDVNTYDDLFAGL 171
           GV+   S+S + PRWV ++ D++C +L+ DC+  F STA+ V+LDKTMD+NTYD +F GL
Sbjct: 183 GVKCEGSDSSETPRWVTLLGDDKCRELLADCIERFTSTAIGVYLDKTMDINTYDQIFEGL 242

Query: 172 SNPKHHDKVKGILVSVCNGAVESFVRTSHQVLTNPXXXXXXXXXXXXXVVGKIDGPGLIE 231
           +NPKH D VK +LVSVCNGA+E+ VRTSH V T+              V+ +I+      
Sbjct: 243 TNPKHQDSVKDVLVSVCNGALETIVRTSHDVFTSS---------RSKNVIEEIEDDDFKS 293

Query: 232 DGCLKPEALLQQLRVSGVGDSGWIEQIRSALSVPANRRFVIDVTGRVTLETVRSFVEFLL 291
           +G  + + + +     GV  +GW E I + L+VP+NRRF+ DVTGRVTLET RS + F++
Sbjct: 294 NGSARSKMVSES--GDGVKSNGWTEAIATTLAVPSNRRFMFDVTGRVTLETTRSIIAFIM 351

Query: 292 WRMSDGLKSTLSKVREEVVDRGHEVVRYVGAKSSVILTLCLALYLHILGG 341
            +   G + +++ V EEV DRG + V YVGAKSSVI+T+CLALYLHI+ G
Sbjct: 352 VKTFQGFRKSINVVHEEVTDRGRQAVEYVGAKSSVIITVCLALYLHIISG 401


>AT1G59510.1 | Symbols: CF9 | Carbohydrate-binding protein |
           chr1:21859768-21860913 FORWARD LENGTH=381
          Length = 381

 Score =  286 bits (732), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 154/341 (45%), Positives = 215/341 (63%), Gaps = 39/341 (11%)

Query: 1   MVSNSADTVSLLSHDLNHFLTSDSDEIPNSLKQLSKIAASKEFLETLSRVSESVTLGIVL 60
           MV +SA+T+S++S DL  FL S+S EIPNSLKQLSKI  SKEF ++L+RVSE+V +G+  
Sbjct: 63  MVIDSAETISIVSRDLKEFLESNSHEIPNSLKQLSKITKSKEFTDSLARVSEAVAIGVFR 122

Query: 61  GCKSQFNSSGEGSSFSDKVAEKLMSKAGTXXXXXXXXXXARNFVLAFFSDADSVGVRSNS 120
           G  S  N   E S+ S  V +++ S+ G           A+N VL F+S    +G    S
Sbjct: 123 GYNSDPNVEKE-SNLS--VVDRVFSEEGAGFVSVVVGSFAKNLVLGFYSGEIEIG----S 175

Query: 121 DDV--PRWVRVICDERCGKLIGDCVRTFVSTAVAVFLDKTMDVNTYDDLFAGLSNPKHHD 178
           DD   PRW+ ++ D++C +L+ DC+  F S+AV+V++DKT+ VNTYD +FAGL+NPKH D
Sbjct: 176 DDSLKPRWMNLLSDDKCRELLADCIERFTSSAVSVYIDKTVGVNTYDQIFAGLTNPKHRD 235

Query: 179 KVKGILVSVCNGAVESFVRTSHQVLTNPXXXXXXXXXXXXXVVGKIDGPGLIEDGCLKPE 238
             + +LVSVCNGA+E+F+RTSH V T+                                E
Sbjct: 236 SARDVLVSVCNGALETFMRTSHDVFTSSG------------------------------E 265

Query: 239 ALLQQLRVSGVGDSGWIEQIRSALSVPANRRFVIDVTGRVTLETVRSFVEFLLWRMSDGL 298
                LR S   ++GW E + + L+VP+NR+F+ DVTGRVTLET+RS +EF++ + S   
Sbjct: 266 KTDSSLRKSENRENGWAEALSTTLAVPSNRKFMFDVTGRVTLETMRSILEFVILKTSQSF 325

Query: 299 KSTLSKVREEVVDRGHEVVRYVGAKSSVILTLCLALYLHIL 339
           K +L  + EEV +RG +VV YVGAKSSVI+T+CLA+Y HI 
Sbjct: 326 KRSLDVIHEEVTERGRQVVGYVGAKSSVIITVCLAVYFHIF 366


>AT3G49790.1 | Symbols:  | Carbohydrate-binding protein |
           chr3:18468296-18469396 REVERSE LENGTH=366
          Length = 366

 Score =  237 bits (604), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 146/345 (42%), Positives = 213/345 (61%), Gaps = 42/345 (12%)

Query: 3   SNSADTVSLLSHDLNHFLTSDSDEIPNSLKQLSKIAASKEFLETLSRVSESVTLGIVLGC 62
           S+SA+TVS++S DL  FL SDSD+IPNSLKQ+SKIA S E   +L R ++++T+G++ G 
Sbjct: 62  SDSAETVSVISKDLTEFLRSDSDQIPNSLKQISKIAKSDELNSSLIRFTQAMTVGLIRGI 121

Query: 63  KSQFNSSGEGSSFSDKVAEKLMSKAGTXXXXXXXXXXARNFVLAFFSDADSVGVRSNSDD 122
                  G GS F+D+V +KL +K+G+          ARN V+A +S A   G  SNS  
Sbjct: 122 -----DDGSGSGFTDRVMDKLFTKSGSGFASAIVGSFARNLVVALYSSA---GDGSNS-- 171

Query: 123 VPRWVRVICDERCGKLIGDCVRTFVSTAVAVFLDKTMDVNTYDDLFAGLSNPKHHDKVKG 182
             + +  +  +   +LIGDCV+ FVSTAV+V+LDKT DVN +DDLFAGL+NPKH  KVK 
Sbjct: 172 --KLLDAVFSDDGRRLIGDCVQRFVSTAVSVYLDKTSDVNVFDDLFAGLTNPKHEGKVKQ 229

Query: 183 ILVSVCNGAVESFVRTSHQVLTNPXXXXXXXXXXXXXVVGKIDGPGLIEDGCLKPEALLQ 242
            LV++CN AVE+FVR S + +                   +++     +D         Q
Sbjct: 230 TLVTLCNSAVETFVRASRKPV-------------------QLNRSSSCQDSS-------Q 263

Query: 243 QLRVSGVGDSGWIEQIRSALSVPANRRFVIDVTGRVTLETVRSFVEFLLWRMSDGLKSTL 302
            L V     + WI+++ S+LSVP+NR++V+D+TGRVT ETVRS +E L+ R +  ++S +
Sbjct: 264 TLTVGSTKQATWIDRVSSSLSVPSNRKYVVDLTGRVTFETVRSLLEVLIERANGKVESYV 323

Query: 303 SKVREEVVDRGHEVVRYVGAKSSVILTLCLALYLHILGGSRIIMP 347
            KVRE    RG+E  R+V  K+S++ +LCL+L L I+    ++ P
Sbjct: 324 EKVRE----RGNETRRFVRVKTSLLHSLCLSLCLQIVEAPWMLTP 364