Miyakogusa Predicted Gene
- Lj1g3v1754610.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1754610.1 Non Chatacterized Hit- tr|I1K885|I1K885_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39243 PE,82.52,0,no
description,Zinc finger, RING/FYVE/PHD-type; no
description,Armadillo-like helical; WDSAM1 PROTEI,CUFF.27753.1
(446 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G49810.1 | Symbols: | ARM repeat superfamily protein | chr3:... 468 e-132
AT5G65920.1 | Symbols: | ARM repeat superfamily protein | chr5:... 456 e-128
AT3G19380.1 | Symbols: PUB25 | plant U-box 25 | chr3:6714602-671... 129 6e-30
AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY p... 126 3e-29
AT1G49780.1 | Symbols: PUB26 | plant U-box 26 | chr1:18429024-18... 110 1e-24
AT2G35930.1 | Symbols: PUB23 | plant U-box 23 | chr2:15083101-15... 108 7e-24
AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 107 2e-23
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20... 104 1e-22
AT5G09800.1 | Symbols: | ARM repeat superfamily protein | chr5:... 104 1e-22
AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1:... 102 5e-22
AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16... 101 1e-21
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 101 1e-21
AT3G52450.1 | Symbols: PUB22 | plant U-box 22 | chr3:19440943-19... 96 4e-20
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12... 94 2e-19
AT1G71020.2 | Symbols: | ARM repeat superfamily protein | chr1:... 94 3e-19
AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1:... 93 4e-19
AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:10... 93 4e-19
AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 | chr3:64... 84 1e-16
AT5G01830.1 | Symbols: | ARM repeat superfamily protein | chr5:... 83 4e-16
AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23548... 83 4e-16
AT3G11840.1 | Symbols: PUB24 | plant U-box 24 | chr3:3736578-373... 79 5e-15
AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 79 6e-15
AT1G67530.2 | Symbols: | ARM repeat superfamily protein | chr1:... 78 2e-14
AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1:... 78 2e-14
AT1G24330.1 | Symbols: | ARM repeat superfamily protein | chr1:... 75 7e-14
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97... 74 2e-13
AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 | chr4:11356143... 73 5e-13
AT3G54790.2 | Symbols: | ARM repeat superfamily protein | chr3:... 72 1e-12
AT1G60190.1 | Symbols: | ARM repeat superfamily protein | chr1:... 72 1e-12
AT3G54790.1 | Symbols: | ARM repeat superfamily protein | chr3:... 72 1e-12
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 71 1e-12
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 71 1e-12
AT5G37490.1 | Symbols: | ARM repeat superfamily protein | chr5:... 67 3e-11
AT5G65500.1 | Symbols: | U-box domain-containing protein kinase... 67 3e-11
AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |... 67 3e-11
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 66 6e-11
AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 | chr1:34... 64 2e-10
AT5G18340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 62 7e-10
AT1G01660.1 | Symbols: | RING/U-box superfamily protein | chr1:... 62 7e-10
AT2G45920.1 | Symbols: | U-box domain-containing protein | chr2... 62 1e-09
AT3G61390.2 | Symbols: | RING/U-box superfamily protein | chr3:... 59 5e-09
AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 | senescence-associ... 59 8e-09
AT4G36550.1 | Symbols: | ARM repeat superfamily protein | chr4:... 58 1e-08
AT2G19410.1 | Symbols: | U-box domain-containing protein kinase... 58 1e-08
AT5G18330.1 | Symbols: | ARM repeat superfamily protein | chr5:... 57 3e-08
AT1G01670.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 3e-08
AT1G76390.2 | Symbols: | ARM repeat superfamily protein | chr1:... 55 1e-07
AT1G76390.1 | Symbols: | ARM repeat superfamily protein | chr1:... 55 1e-07
AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 | chr1:24... 55 1e-07
AT5G18320.1 | Symbols: | ARM repeat superfamily protein | chr5:... 54 2e-07
AT5G57035.1 | Symbols: | U-box domain-containing protein kinase... 54 2e-07
AT2G45910.1 | Symbols: | U-box domain-containing protein kinase... 54 2e-07
AT3G49060.1 | Symbols: | U-box domain-containing protein kinase... 54 2e-07
AT3G49060.2 | Symbols: | U-box domain-containing protein kinase... 54 2e-07
AT5G51270.1 | Symbols: | U-box domain-containing protein kinase... 53 5e-07
AT4G25160.1 | Symbols: | U-box domain-containing protein kinase... 52 1e-06
AT3G02840.1 | Symbols: | ARM repeat superfamily protein | chr3:... 51 1e-06
AT5G61560.2 | Symbols: | U-box domain-containing protein kinase... 51 2e-06
AT5G61560.1 | Symbols: | U-box domain-containing protein kinase... 51 2e-06
>AT3G49810.1 | Symbols: | ARM repeat superfamily protein |
chr3:18474936-18476282 REVERSE LENGTH=448
Length = 448
Score = 468 bits (1205), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/405 (58%), Positives = 296/405 (73%), Gaps = 5/405 (1%)
Query: 43 EILDLKVMIEEMESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPT 102
E LDLK MI+E++ D+PSVFICPISLEPMQDPVTLCTGQTY+R NI KWF+LGH TCPT
Sbjct: 48 EKLDLKKMIKELDLQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPT 107
Query: 103 TMQELWDDSVTPNKTLTHLILTWFSHKYLAMKKKLEDVQGRXXXXXXXXXXXXGQARVKA 162
TMQELWDD+VTPNKTL HLI TWFS KY+ MKK+ EDVQGR GQARV A
Sbjct: 108 TMQELWDDTVTPNKTLHHLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLKKAKGQARVHA 167
Query: 163 LKDLRQLVAANVFARRTVSENGGLALVCSLLGPFTSHAVGSEAIGIIVNLDLVSELKRNL 222
L +L+Q+V A++ AR+TV E GG++++ SLLGPFTSHAVGSE + I+V+LDL S+ K L
Sbjct: 168 LSELKQIVIAHLMARKTVVEEGGVSVISSLLGPFTSHAVGSEVVAILVSLDLDSDSKSGL 227
Query: 223 MHPAKVSLLVDIMNEGTIETKMNCAKLIEMLLIEGSGNGNETEIXXXXXXXXXXXXXXXD 282
M PAKVSL+VD++N+G+ ETK+NCA+LI L+ E G E+ D
Sbjct: 228 MQPAKVSLIVDMLNDGSNETKINCARLIRGLVEE---KGFRAELVSSHSLLVGLMRLVKD 284
Query: 283 KKHPTGVLTGLILLKAICXXXXXXXXXXXXXGAVPQLIELLPSLNKECLEVALYILEVLS 342
K+H GV L LLK I GAVPQL+++LPSL+ ECLE+AL++L+ L
Sbjct: 285 KRHRNGVSPALRLLKPI-SVHKQVRSLMVSIGAVPQLVDILPSLDPECLELALFVLDALC 343
Query: 343 TLPEGRMALKECPNIIPNVVKLLMRVSERCTQFALSILWAIYKLAPEECASKAVEAGLAA 402
T EGR+A+K+ N IP V++LMRVSE CT +ALSILW++ KLAPEEC+ AVE GLAA
Sbjct: 344 TDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSILWSVCKLAPEECSPLAVEVGLAA 403
Query: 403 KLLLVIQSGCNPVLKQMSSEFLKMCSVNYSTSILISKCMLS-TIQ 446
KLLLVIQSGC+ LKQ S+E LK+CS++YS ++ ISKC L+ TIQ
Sbjct: 404 KLLLVIQSGCDAALKQRSAELLKLCSLHYSDTMFISKCKLTRTIQ 448
>AT5G65920.1 | Symbols: | ARM repeat superfamily protein |
chr5:26364323-26365657 REVERSE LENGTH=444
Length = 444
Score = 456 bits (1174), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/452 (53%), Positives = 312/452 (69%), Gaps = 26/452 (5%)
Query: 13 MPLYQASKDRKDEGLKIVDVLGLESTMK-GV----------------EILDLKVMIEEME 55
MP++Q SK+ +G +L L S +K GV + LDLK MI E+E
Sbjct: 1 MPMFQPSKNGGFDG----HILDLHSAVKDGVLGGGDGKFLVVVTDEKKKLDLKEMISELE 56
Query: 56 SIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPN 115
++PSVFICPISLEPMQDPVTLCTGQTY+RSNILKWF++GH TCPTTMQELWDD VTPN
Sbjct: 57 LPEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPN 116
Query: 116 KTLTHLILTWFSHKYLAMKKKLEDVQGRXXXXXXXXXXXXGQARVKALKDLRQLVAANVF 175
KTL LI TWFS KY+ MKK+ EDVQGR G+A+V AL +L+Q+V A+
Sbjct: 117 KTLHQLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLRKAKGKAKVHALSELKQVVMAHAI 176
Query: 176 ARRTVSENGGLALVCSLLGPFTSHAVGSEAIGIIVNLDLVSELKRNLMHPAKVSLLVDIM 235
A++TV + GG+ ++ SLL PFTSHAVGSEAI I+VNL+L S+ K LM PA+VSL+VD++
Sbjct: 177 AKKTVVDEGGVFVISSLLSPFTSHAVGSEAIAILVNLELDSDSKAGLMQPARVSLMVDML 236
Query: 236 NEGTIETKMNCAKLIEMLLIEGSGNGNETEIXXXXXXXXXXXXXXXDKKHPTGVLTGLIL 295
N+G+IETK+NCA+LI L+ E G E+ D++ GV L L
Sbjct: 237 NDGSIETKINCARLIGRLVEE---KGFRAELVSSHSLLVGLMRLVKDRRRRNGVSPALTL 293
Query: 296 LKAICXXXXXXXXXXXXXGAVPQLIELLPSLNKECLEVALYILEVLSTLPEGRMALKECP 355
LK++ GAVPQL+++LP L+ ECLE AL++L+ L EGR+ALK+
Sbjct: 294 LKSV-SVHKQVRNLLVRIGAVPQLVDVLPCLDVECLESALFVLDSLCLESEGRIALKDSV 352
Query: 356 NIIPNVVKLLMRVSERCTQFALSILWAIYKLAPEECASKAVEAGLAAKLLLVIQSGCNPV 415
N IP+ V+LLM+VSE+CT +A+SILW++ KLA EEC+S AVE GLAAKLLLVIQSGC+P
Sbjct: 353 NTIPHTVRLLMKVSEKCTNYAISILWSVCKLASEECSSLAVEVGLAAKLLLVIQSGCDPA 412
Query: 416 LKQMSSEFLKMCSVNYSTSILISKCMLS-TIQ 446
LKQ S+E LK+CS++YS S+ ISKC L+ TIQ
Sbjct: 413 LKQRSAELLKLCSLHYSDSMFISKCKLTRTIQ 444
>AT3G19380.1 | Symbols: PUB25 | plant U-box 25 |
chr3:6714602-6715867 REVERSE LENGTH=421
Length = 421
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 180/401 (44%), Gaps = 50/401 (12%)
Query: 40 KGVEILDLKVMIEEMESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHK- 98
+ +E LDL I +P F CPISLE MQDPVT+CTGQTYDR++I W S+G+
Sbjct: 3 RNIEPLDL--------GIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNT 54
Query: 99 TCPTTMQELWDDSVTPNKTLTHLILTWF-------SHKYLAMKKKLEDVQGRXXXXXXXX 151
TCP T L D ++ PN TL LI W + K+ + R
Sbjct: 55 TCPVTRAPLSDFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASA 114
Query: 152 XXXXG---QARVKALKDLRQLVAANVFARRT-------VSENGGLALVCSLLGPFTSHAV 201
++R AL+ LR FAR + + N L+ L TS +
Sbjct: 115 ITGTHVSVRSRAAALRRLRG------FARDSDKNRVLIAAHNATEILIKILFSETTSSEL 168
Query: 202 GSEAIGIIVNLDLV--SELKRNLMHPAKVSLLVDIMNEGTIETKMNCAKLIEMLL----- 254
SE++ ++V L + ++ P +V L ++ + +IET++N A LIE++
Sbjct: 169 VSESLALLVMLPITEPNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKS 228
Query: 255 --IEGSGNGNETEIXXXXXXXXXXXXXXXDKKHPTGVLTGLILLKAICXXXXXXXXXXXX 312
++GS + +E+ K G+ L A+C
Sbjct: 229 ADLKGSISNSESVFEGVLDLLRNPISSRRALK------IGIKTLFALC-SVKSTRHIAIT 281
Query: 313 XGAVPQLIELLPSLNKEC-LEVALYILEVLSTLPEGRMALKECPNIIPNVVKLLMRVSER 371
GA LI+ L + C E AL +E+L PEG A E +P +VK ++RVS+R
Sbjct: 282 AGAPEILIDRLAADFDRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDR 341
Query: 372 CTQFALSILWAIYKLAPEECASKAVEAGLAAKLLLVIQSGC 412
T++A L A+ A E +A AG+ +LLL++QS C
Sbjct: 342 ATEYAAGALLALCT-AEERWREEAAGAGVVVQLLLMVQSEC 381
>AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY
protein 2 | chr5:25842119-25843381 REVERSE LENGTH=420
Length = 420
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 188/403 (46%), Gaps = 37/403 (9%)
Query: 57 IDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNK 116
I VP+ F CPISL+ M+ PV+LCTG TYDR++I +W G+ TCP TMQ L + PN+
Sbjct: 8 ITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNR 67
Query: 117 TLTHLILTWFSHKYLAMKKKLEDVQGRXXXXXXXXXXXXGQARVKALK---DLRQLVAAN 173
TL LI W ++ V+ RVK K D R++++
Sbjct: 68 TLQRLIEIWSDS-----VRRRTCVESAELAAPTRDEIADAIDRVKIEKEERDDREVLSKI 122
Query: 174 V-FARRTVSENGGLA-------LVCSLLGPF---TSHAVGS----EAIGIIVNL-DLVSE 217
V F R + G LA L+ L+ T+ A S EA+ I+ + VS+
Sbjct: 123 VRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIRSKVSD 182
Query: 218 LKR--NLM---HPAKVSLLVDIMNEGTIETKMNCAKLIEMLLIEGSGNGNETEIXXXXXX 272
+R NL+ ++S++V + G +E K++CA L+E + ++ E
Sbjct: 183 RRRFSNLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAERDGLITE 242
Query: 273 XXXXXXXXXDKKHPTGVLTGLILLKAICXXXXXXXXXXXXXGAVPQLIELLPSLNKECLE 332
D L+ LI + + L + SL+ E
Sbjct: 243 LMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSLSVSVTE 302
Query: 333 VALYILEVLSTLPEGRMAL----KECPNIIPNVVKLLMRVSERCTQFALSILWAIYKLAP 388
L +LE+L++ EGR + EC + VVK LM+VS T+ A+++LW++ L
Sbjct: 303 KCLKLLEILASTKEGRSEICGGDGEC---LKTVVKKLMKVSTAATEHAVTVLWSVSYLFK 359
Query: 389 EECASKAVEA-GLAAKLLLVIQSGCNPVLKQMSSEFLKMCSVN 430
E+ A +AV + K+LL++QS C+P +++M ++ LK+ VN
Sbjct: 360 EDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKVFKVN 402
>AT1G49780.1 | Symbols: PUB26 | plant U-box 26 |
chr1:18429024-18430289 REVERSE LENGTH=421
Length = 421
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 179/391 (45%), Gaps = 26/391 (6%)
Query: 57 IDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNK 116
I +P F CPISL+ M DPVT+ TGQTYDR++I W ++G+ TCP T L D ++ PN
Sbjct: 12 IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNH 71
Query: 117 TLTHLILTWF-------SHKYLAMKKKLEDVQGRXXXXXXXXXXXXG---QARVKALKDL 166
TL LI W + K+ + + R ++R A++ L
Sbjct: 72 TLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAIRRL 131
Query: 167 RQLVAANVFARRTVSENGGLALVCSLL-----GPFTSHAVGSEAIGIIVNLDLV-SELKR 220
R L + R ++ + ++ +L S + SE++ ++V L + +E +
Sbjct: 132 RGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLLHMTETECEA 191
Query: 221 NLMHPAKVSLLVDIMNEGTIETKMNCAKLIEMLLIEGSGNGNETEIXXXXXXXXXXXXXX 280
P++V + ++ + +IE ++N A LIEM+L ++
Sbjct: 192 VASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLT----GAKSMDLKLIISGSDSIFEGV 247
Query: 281 XD-KKHPTGVLTGL-ILLKAICX--XXXXXXXXXXXXGAVPQLIELLPSLNKEC-LEVAL 335
D K+P L I +KAI GA LI+ L + C E L
Sbjct: 248 LDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERGL 307
Query: 336 YILEVLSTLPEGRMALKECPNIIPNVVKLLMRVSERCTQFALSILWAIYKLAPEECASKA 395
+E+L LPEG A E +P +VK ++RVS+R T++A L A+ A E C +A
Sbjct: 308 ATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCT-AEERCRDEA 366
Query: 396 VEAGLAAKLLLVIQSGCNPVLKQMSSEFLKM 426
AGL +LLL++QS C K+ + LK+
Sbjct: 367 AAAGLVTQLLLLVQSDCTERAKRKAQMLLKL 397
>AT2G35930.1 | Symbols: PUB23 | plant U-box 23 |
chr2:15083101-15084336 REVERSE LENGTH=411
Length = 411
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 184/407 (45%), Gaps = 27/407 (6%)
Query: 55 ESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHK-TCPTTMQELWDDSVT 113
E I++P F+CPISLE M+DPV + TG TYDR +I KW G K +CP T Q++ D +T
Sbjct: 8 EEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLT 67
Query: 114 PNKTLTHLILTW----FSHKYLAMKKKLEDVQGRXXXXXXXXXXXXGQARVKALKDLRQL 169
PN TL LI +W S+ + + + +VK LK LRQ+
Sbjct: 68 PNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQI 127
Query: 170 VAANVFARRTVSENGGLALVCSLLGPFTSH-AVGSEAIGIIVNLDLVSELKRNLMHPAK- 227
V+ N +R + G + +++ + + ++ EA+ ++ +L+ + +NL++ K
Sbjct: 128 VSENATNKRCLEAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSETVLKNLLNNKKD 187
Query: 228 ---VSLLVDIMNEGTIETKMNCAKLIEMLLIEGSGNGNETEIXXXXXXXXXXXXXXXDKK 284
V L IM G E+++ L++ +L + T D+
Sbjct: 188 NNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMT---LKPEVFTEVVQILDDRI 244
Query: 285 HPTGVLTGLILLKAICXXXXXXXXXXXXXGAVPQLIELLP----SLNKECLEVALYILEV 340
+ +L IC G + +IELL + + E+A+ +L++
Sbjct: 245 SQKATKAAMHILVNIC-PWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDL 303
Query: 341 LSTLPEGRMALKECPNIIPNVVKLLMRVSERCTQFALSILWAIYKLAPEECASKA----- 395
L EGR I V K ++RVS+ + A+ +L ++ + CA+ A
Sbjct: 304 LCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRF----CATPALLHEM 359
Query: 396 VEAGLAAKLLLVIQSGCNPVLKQMSSEFLKMCSVNYSTSILISKCML 442
++ G+ AKL LV+Q C K+ + E LK+ + + S + K M+
Sbjct: 360 LQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCLPKNMI 406
>AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=431
Length = 431
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 171/408 (41%), Gaps = 46/408 (11%)
Query: 43 EILDLKVMIEEMESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPT 102
EI+ + EE+E I +PS F CPIS E M+DPV + +G TYDR NI KWF G++TCP
Sbjct: 18 EIIPVTSCSEEVE-ITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPV 76
Query: 103 TMQELWDDSVTPNKTLTHLILTW-------------------FSHKYLAMKKKLEDVQGR 143
T L PN T+ +I W SH+ + ++L R
Sbjct: 77 TNTVLTSLEQIPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRR 136
Query: 144 XXXXXXXXXXXXGQARVKALKDLRQLVAANVFARRTVSENGGLALVCSLLGPFTSHAVGS 203
A ++ + + +L + R+ V ENG ++C F+ +A S
Sbjct: 137 GDYA----------ACMEMVTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANAS 186
Query: 204 ----EAIGIIV-NLDLVSELKRNLMHPAKVSLLVDIMNEGTIETKMNCAKLIEMLLIEGS 258
E + ++ L + E + L + + LV+++ G N A LI+ LL
Sbjct: 187 LLLEETVSVLTWMLPIGLEGQSKLTTTSSFNRLVELLRNG----DQNAAFLIKELL---- 238
Query: 259 GNGNETEIXXXXXXXXXXXXXXXDKKHPTGVLTGLILLKAICXXXXXXXXXXXXXGAVPQ 318
N T + + + LI + + V
Sbjct: 239 -ELNVTHVHALTKINGVQEAFMKSINRDSTCVNSLISIHHMILTNQETVSRFLELDLVNI 297
Query: 319 LIELLPSLNKECLEVALYILEVLSTLPEGRMALKECPNIIPNVVKLLMRVSERCTQFALS 378
+E+L E AL +L V+ EGR ++ +IP +VK ++++SE+ + +S
Sbjct: 298 TVEMLVDSENSVCEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISEK--KDLVS 355
Query: 379 ILWAIYKLAPEECASKAVEAGLAAKLLLVIQSGCNPVLKQMSSEFLKM 426
++W + K +A+ G KL++++Q GC K+ +E LKM
Sbjct: 356 VMWKVCKSGDGSEVEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKM 403
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
chr3:20321524-20323848 FORWARD LENGTH=632
Length = 632
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 146/341 (42%), Gaps = 30/341 (8%)
Query: 59 VPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTL 118
+P F CPISLE M+DPV + TGQTY+RS+I KW GHKTCP + + L +TPN L
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVL 307
Query: 119 THLILTWFSHKYLAMKK-----KLEDVQG-------RXXXXXXXXXXXXG--QARVKALK 164
LI W + + + + + G R G + + A
Sbjct: 308 KSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAG 367
Query: 165 DLRQLVAANVFARRTVSENGGLALVCSLLG---PFTSHAVGSEAIGIIVNLDLVSELKRN 221
+LR L NV R ++E G + L+ LL P T ++ ++NL + K
Sbjct: 368 ELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQE----HSVTALLNLSINEGNKGA 423
Query: 222 LMHPAKVSLLVDIMNEGTIETKMNCAK-LIEMLLIEGSGNGNETEIXXXXXXXXXXXXXX 280
++ ++ +V+++ G++E + N A L + +I+ +
Sbjct: 424 IVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTR 483
Query: 281 XDKKHPTGVLTGLILLKAICXXXXXXXXXXXXXGAVPQLIELLPSLNKECLEVALYILEV 340
KK + L + + G V L LL ++ AL IL +
Sbjct: 484 RGKKDAATAIFNLCIYQG-------NKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAI 536
Query: 341 LSTLPEGRMALKECPNIIPNVVKLLMRVSERCTQFALSILW 381
LST EG+ A+ E + IP +V+++ S R + A +ILW
Sbjct: 537 LSTNQEGKTAIAEAES-IPVLVEIIRTGSPRNRENAAAILW 576
>AT5G09800.1 | Symbols: | ARM repeat superfamily protein |
chr5:3043123-3044352 REVERSE LENGTH=409
Length = 409
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 172/401 (42%), Gaps = 49/401 (12%)
Query: 59 VPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTL 118
VP F CPISL+ M+ PV+L TG TYDR +I +W G+ TCP TMQ L + PN TL
Sbjct: 11 VPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTL 70
Query: 119 THLILTWFSHKYLAMKKKLEDVQGRXXXXXXXXXXXXGQARVKALKDLRQLVAANVFARR 178
LI W + D + R + D R + FAR
Sbjct: 71 HRLIDHWSDS-----INRRADSESPESDTPTRDEINAAIERFRIENDARSKILR--FARE 123
Query: 179 TVSENGGLA----LVCSLLGPFTSHAVGSEAIGIIVN--LDLVSELKRNLMHPAKVSLLV 232
+ LA V L+ + S++ ++V + ++S ++R + ++S L+
Sbjct: 124 SDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIRRKIFDRRRLSNLI 183
Query: 233 -----D-------IMNEGTIETKMNCAKLIEML-------LIEGSGNGNETEIXXXXXXX 273
D ++ G + K++C+ ++E + LI G G TEI
Sbjct: 184 LTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVTEIIKLISSD 243
Query: 274 XXXXXXXXDKKHPTGVLTGLILLKAICXXXXXXXXXXXXXGAVPQLIELL--PSLNKECL 331
+ L LL AI V +L LL P+ +
Sbjct: 244 SDSSLIEAN----------LSLLIAI-ASSKRVKLALIREKLVTKLTSLLTDPTTSVSVT 292
Query: 332 EVALYILEVLSTLPEGRMALKECPNI-IPNVVKLLMRVSERCTQFALSILWAIYKLAPEE 390
E L +LE +S+ EGR + C + + VV LM+VS T+ A+++LW++ L E+
Sbjct: 293 EKCLKLLEAISSCKEGRSEI--CDGVCVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEK 350
Query: 391 CASKAV-EAGLAAKLLLVIQSGCNPVLKQMSSEFLKMCSVN 430
A AV K+LL++QS C+ ++ M ++ LK+ VN
Sbjct: 351 KAQDAVIRINGVTKILLLLQSNCSLTVRHMLTDLLKVFKVN 391
>AT1G23030.1 | Symbols: | ARM repeat superfamily protein |
chr1:8156745-8158842 FORWARD LENGTH=612
Length = 612
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 154/346 (44%), Gaps = 20/346 (5%)
Query: 55 ESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTP 114
+ + +P F+CP+SLE M+DPV + TGQTY+R+ I +W G+ TCP T Q+L + ++TP
Sbjct: 237 DKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTP 296
Query: 115 NKTLTHLILTWFSHK-------YLAMKKKLEDVQGRXXXXXXXXXXXXGQARVKALKDLR 167
N L LI W + Y+ + K + R A+ ++R
Sbjct: 297 NYVLRSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIR 356
Query: 168 QLVAANVFARRTVSENGGLALVCSLLGPFTSHAVGSE--AIGIIVNLDLVSELKRNLMHP 225
L + R ++E G + ++ +LL TS V ++ AI ++NL + K +M
Sbjct: 357 SLSKRSTDNRILIAEAGAIPVLVNLL---TSEDVATQENAITCVLNLSIYENNKELIMFA 413
Query: 226 AKVSLLVDIMNEGTIETKMNCAKLIEMLLIEGSGNGNETEIXXXXXXXXXXXXXXXDKKH 285
V+ +V ++ GT+E + N A + L + +E +I +
Sbjct: 414 GAVTSIVQVLRAGTMEARENAAATLFSLSL-----ADENKIIIGGSGAIPALVDLLENGT 468
Query: 286 PTGVLTGLILLKAICXXXXXXXXXXXXXGAVPQLIELLP-SLNKECLEVALYILEVLSTL 344
P G L +C G V L+++L S ++ AL IL VL+
Sbjct: 469 PRGKKDAATALFNLC-IYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANN 527
Query: 345 PEGRMALKECPNIIPNVVKLLMRVSERCTQFALSILWAIYKLAPEE 390
+ + A+ + N +P ++ +L R + A +IL ++ K E+
Sbjct: 528 QDAKSAIVKA-NTLPALIGILQTDQTRNRENAAAILLSLCKRDTEK 572
>AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 |
chr5:16928086-16930367 REVERSE LENGTH=660
Length = 660
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 13/231 (5%)
Query: 29 IVDVLGLESTMKGVEILDL------KVMIEEMESIDVPSVFICPISLEPMQDPVTLCTGQ 82
I+++L ++G+E D+ I + S+ +P F+CPI+LE M DPV + TGQ
Sbjct: 254 IIELLNKFKKLQGLEATDILYQPVINKAITKSTSLILPHEFLCPITLEIMLDPVIIATGQ 313
Query: 83 TYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTLTHLILTWFSHKYLAMKKK--LEDV 140
TY++ +I KWF GHKTCP T QEL S+ PN L +LI+ W + +K D
Sbjct: 314 TYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLIMQWCEKNNFKIPEKEVSPDS 373
Query: 141 QGRXXXXXXXXXXXXGQARV----KALKDLRQLVAANVFARRTVSENGGLALVCSLLGPF 196
Q +++ +++K +R L N R ++ G + L+ LL +
Sbjct: 374 QNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLS-Y 432
Query: 197 TSHAVGSEAIGIIVNLDLVSELKRNLMHPAKVSLLVDIMNEGTIETKMNCA 247
+ A+ ++NL + K+ + + + +++I+ G E + N A
Sbjct: 433 PDSGIQENAVTTLLNLSIDEVNKKLISNEGAIPNIIEILENGNREARENSA 483
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 145/343 (42%), Gaps = 37/343 (10%)
Query: 59 VPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTL 118
+P F CPISLE M+DPV + +GQTY+R+ I KW GH TCP T Q L ++TPN L
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVL 315
Query: 119 THLILTW--------------------FSHKYLAMKKKLEDVQGRXXXXXXXXXXXXGQA 158
LI W S A K+ED+ R +
Sbjct: 316 RSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNP-------ED 368
Query: 159 RVKALKDLRQLVAANVFARRTVSENGGLALVCSLLGPFTSHAVGSEAIGIIVNLDLVSEL 218
+ A ++R L N R ++E G + L+ LL S + ++ ++NL +
Sbjct: 369 QRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSR-IQEHSVTALLNLSICENN 427
Query: 219 KRNLMHPAKVSLLVDIMNEGTIETKMNCAK-LIEMLLIEGSGNGNETEIXXXXXXXXXXX 277
K ++ + +V ++ +G++E + N A L + +I +E ++
Sbjct: 428 KGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVI------DENKVTIGALGAIPPL 481
Query: 278 XXXXDKKHPTGVLTGLILLKAICXXXXXXXXXXXXXGAVPQLIELLPSLNKECLEVALYI 337
++ G L +C G +P L LL ++ AL I
Sbjct: 482 VVLLNEGTQRGKKDAATALFNLC-IYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAI 540
Query: 338 LEVLSTLPEGRMALKECPNIIPNVVKLLMRVSERCTQFALSIL 380
L +LS+ PEG+ A+ + +P++V+ + S R + A ++L
Sbjct: 541 LAILSSHPEGK-AIIGSSDAVPSLVEFIRTGSPRNRENAAAVL 582
>AT3G52450.1 | Symbols: PUB22 | plant U-box 22 |
chr3:19440943-19442250 REVERSE LENGTH=435
Length = 435
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 177/430 (41%), Gaps = 76/430 (17%)
Query: 55 ESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHK-TCPTTMQELWDDSVT 113
+ I++PS F+CPISL+ M+DPV + TG TYDR +I KW G K +CP T Q + + +T
Sbjct: 3 QEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLT 62
Query: 114 PNKTLTHLILTW----FSHKYLAMKKKLEDVQGRXXXXXXXXXXXXGQARVKALKDLRQL 169
PN TL LI +W S+ + + +VK LK LRQ+
Sbjct: 63 PNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQI 122
Query: 170 VAANVFARRTVSENGGLALVCSLLGPFTSHAVGS-------------------------- 203
V+ N +R + A V L S++V +
Sbjct: 123 VSENTTNKRCLEA----AEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRF 178
Query: 204 --------EAIGIIVNLDLVSELKRNLMHPAK----VSLLVDIMNEGTIETK-------- 243
EA+ ++ +LD ++L++ K V L IM G E++
Sbjct: 179 DSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLLK 238
Query: 244 --MNCAKLIEMLLIEGSGNGNETEIXXXXXXXXXXXXXXXDKKHPTGVLTGLILLKAICX 301
+ A ++++L+E G +I D+ + + +L C
Sbjct: 239 KLLEVADPMQIILLERELFGEVIQI-------------LHDQISHKATRSAMQILVITC- 284
Query: 302 XXXXXXXXXXXXGAVPQLIELLP----SLNKECLEVALYILEVLSTLPEGRMALKECPNI 357
G + +IELL S + E+A+ +L++L EGR
Sbjct: 285 PWGRNRHKAVEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAA 344
Query: 358 IPNVVKLLMRVSERCTQFALSILWAIYKL-APEECASKAVEAGLAAKLLLVIQSGCNPVL 416
I V K ++RVS+ ++ A+ +L ++ + A + ++ G+ AKL LV+Q C
Sbjct: 345 IAVVSKKILRVSQITSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKT 404
Query: 417 KQMSSEFLKM 426
K+ + E LK+
Sbjct: 405 KEKAKELLKL 414
>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
chr2:12367001-12370608 REVERSE LENGTH=962
Length = 962
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 139/339 (41%), Gaps = 26/339 (7%)
Query: 60 PSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTLT 119
P F CPISLE M DPV + +GQTY+R I KW GH TCP T + L D +TPN L
Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLR 316
Query: 120 HLILTWFSHKYLAMKKK----------------LEDVQGRXXXXXXXXXXXXGQARVKAL 163
LI W + K+ +D + + R A
Sbjct: 317 SLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPEDRRSAA 376
Query: 164 KDLRQLVAANVFARRTVSENGGLALVCSLLGPFTSHAVGSEAIGIIVNLDLVSELKRNLM 223
++R L N R ++ +G + L+ +LL A+ I+NL + E K ++
Sbjct: 377 GEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKIV 436
Query: 224 HPA-KVSLLVDIMNEGTIETKMNCAK-LIEMLLIEGSGNGNETEIXXXXXXXXXXXXXXX 281
+ + V +V ++ +G++E + N A L + +I+ E ++
Sbjct: 437 YSSGAVPGIVHVLQKGSMEARENAAATLFSLSVID------ENKVTIGAAGAIPPLVTLL 490
Query: 282 DKKHPTGVLTGLILLKAICXXXXXXXXXXXXXGAVPQLIELLPSLNKECLEVALYILEVL 341
+ G L +C G VP L+ LL ++ +L IL +L
Sbjct: 491 SEGSQRGKKDAATALFNLC-IFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAIL 549
Query: 342 STLPEGRMALKECPNIIPNVVKLLMRVSERCTQFALSIL 380
S+ P+G+ + + +P +V + S R + + ++L
Sbjct: 550 SSHPDGKSEVG-AADAVPVLVDFIRSGSPRNKENSAAVL 587
>AT1G71020.2 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26792357 REVERSE LENGTH=480
Length = 480
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 15/211 (7%)
Query: 52 EEMESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDS 111
++ +++ +P F+CPISLE M+DP + TGQTY+RS I +W G+ +CP T Q+L + +
Sbjct: 88 QKSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFT 147
Query: 112 VTPNKTLTHLILTWFSHK-------YLAMKKK-----LEDVQGRXXXXXXXXXXXXGQA- 158
+TPN L LI W + Y+ + K D+ G Q+
Sbjct: 148 LTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSI 207
Query: 159 --RVKALKDLRQLVAANVFARRTVSENGGLALVCSLLGPFTSHAVGSEAIGIIVNLDLVS 216
R A+ ++R L + R ++E G + ++ LL A+ I+NL +
Sbjct: 208 EDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYE 267
Query: 217 ELKRNLMHPAKVSLLVDIMNEGTIETKMNCA 247
K +M V+ +V ++ G++E + N A
Sbjct: 268 HNKELIMLAGAVTSIVLVLRAGSMEARENAA 298
>AT1G71020.1 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26793105 REVERSE LENGTH=628
Length = 628
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 15/211 (7%)
Query: 52 EEMESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDS 111
++ +++ +P F+CPISLE M+DP + TGQTY+RS I +W G+ +CP T Q+L + +
Sbjct: 236 QKSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFT 295
Query: 112 VTPNKTLTHLILTWFSHK-------YLAMKKK-----LEDVQGRXXXXXXXXXXXXGQA- 158
+TPN L LI W + Y+ + K D+ G Q+
Sbjct: 296 LTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSI 355
Query: 159 --RVKALKDLRQLVAANVFARRTVSENGGLALVCSLLGPFTSHAVGSEAIGIIVNLDLVS 216
R A+ ++R L + R ++E G + ++ LL A+ I+NL +
Sbjct: 356 EDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYE 415
Query: 217 ELKRNLMHPAKVSLLVDIMNEGTIETKMNCA 247
K +M V+ +V ++ G++E + N A
Sbjct: 416 HNKELIMLAGAVTSIVLVLRAGSMEARENAA 446
>AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 |
chr1:10264412-10266601 FORWARD LENGTH=729
Length = 729
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 57 IDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNK 116
I VP F+CPISL+ M DPV + TGQTYDR++I +W GH TCP T Q L D + PN+
Sbjct: 303 ITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNR 362
Query: 117 TLTHLILTW-------FSHKY-----------LAMKKKLEDVQGRXXXXXXXXXXXXGQA 158
L +LI+ W + ++ L K +E + A
Sbjct: 363 ALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADGSQAA 422
Query: 159 RVKALKDLRQLVAANVFARRTVSENGGLALVCSLLGPFTSHAVGSE-AIGIIVNLDLVSE 217
+ A +++R L R ++E G + +C LL + +A+ E ++ ++NL + +
Sbjct: 423 QTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLT--SENAIAQENSVTAMLNLSIYEK 480
Query: 218 LKRNLMHPAK-VSLLVDIMNEG-TIETKMNCA 247
K +M + +V ++ G T+E + N A
Sbjct: 481 NKSRIMEEGDCLESIVSVLVSGLTVEAQENAA 512
>AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 |
chr3:6434234-6435481 REVERSE LENGTH=415
Length = 415
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 52 EEMES-IDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDD 110
+E E+ I VPS F CPISL+ M+ PV+LCTG TYDR++I +W G+ TCP TMQ L
Sbjct: 4 DETETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTK 63
Query: 111 SVTPNKTLTHLILTW 125
PN TL LI W
Sbjct: 64 DFVPNLTLQRLINIW 78
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 62/105 (59%), Gaps = 4/105 (3%)
Query: 332 EVALYILEVLSTLPEGRMAL--KECPNIIPNVVKLLMRVSERCTQFALSILWAI-YKLAP 388
E +L +LE LS+ EGR+ + + + VVK L++VS T+ A++ILW + Y
Sbjct: 296 EKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYVFRE 355
Query: 389 EECASKAVE-AGLAAKLLLVIQSGCNPVLKQMSSEFLKMCSVNYS 432
++ + VE + KLL+VIQS C+ +++QM+ + +K+ N S
Sbjct: 356 DKTVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVLKFNSS 400
>AT5G01830.1 | Symbols: | ARM repeat superfamily protein |
chr5:320983-323007 FORWARD LENGTH=674
Length = 674
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%)
Query: 52 EEMESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDS 111
+ + ++P+ F CPI+LE M+DPV + TGQTYDR +I W GH TCP T Q L S
Sbjct: 267 QSLSDANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTS 326
Query: 112 VTPNKTLTHLILTW 125
+ PN+ L +LI+ W
Sbjct: 327 LVPNRALKNLIVLW 340
>AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2354884-2356613 FORWARD LENGTH=460
Length = 460
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 112/253 (44%), Gaps = 26/253 (10%)
Query: 21 DRKDEGLKIVDVLG------LESTMKGVEILDLKVMIEEMESIDVPSVFICPISLEPMQD 74
D D G++ +D L E+TM+ + +E +E++ P F CP+S E M+D
Sbjct: 33 DEDDLGVQTIDQLQDALSALREATMRK---MAKSSSLEMLETVSCPEEFRCPLSNELMRD 89
Query: 75 PVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTLTHLILTWFSHKYLAMK 134
PV L +GQTYD+ I KW S G++TCP T Q L ++TPN + +I W L K
Sbjct: 90 PVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNLLIREMISKWCKKNGLETK 149
Query: 135 KKL-------EDVQGRXXXXXXXX-----XXXXGQARVKALKDLRQLVAANVFARRTVSE 182
+ ++ R Q + A K+LR L R E
Sbjct: 150 SQYHPNLVNEDETVTRSDREIFNSLLCKVSSSNLQDQKSAAKELRLLTRKGTEFRALFGE 209
Query: 183 NGG--LALVCSLL-GPFTSHAVGSEAIGIIVNLDLVSELKRNLM--HPAKVSLLVDIMNE 237
+ LV LL G + + + ++N+ + + + L+ +P + LL+D +
Sbjct: 210 SPDEITRLVNPLLHGSNPDEKLQEDVVTTLLNISIHDDSNKKLVCENPNVIPLLIDALRR 269
Query: 238 GTIETKMNCAKLI 250
GT+ T+ N A I
Sbjct: 270 GTVATRSNAAAAI 282
>AT3G11840.1 | Symbols: PUB24 | plant U-box 24 |
chr3:3736578-3738250 REVERSE LENGTH=470
Length = 470
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 50 MIEEMESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQEL-W 108
M +E E I++P+ FICPISLE M+DPVT +G TYDR NI+KW +CP T Q L
Sbjct: 15 MDQEEEEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLE-KVPSCPVTKQPLPL 73
Query: 109 DDSVTPNKTLTHLILTW 125
D +TPN L LI W
Sbjct: 74 DSDLTPNHMLRRLIQHW 90
>AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=415
Length = 415
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 160/408 (39%), Gaps = 62/408 (15%)
Query: 43 EILDLKVMIEEMESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPT 102
EI+ + EE+E I +PS F CPIS E M+DP WF G++TCP
Sbjct: 18 EIIPVTSCSEEVE-ITIPSQFQCPISYELMKDP----------------WFESGYQTCPV 60
Query: 103 TMQELWDDSVTPNKTLTHLILTW-------------------FSHKYLAMKKKLEDVQGR 143
T L PN T+ +I W SH+ + ++L R
Sbjct: 61 TNTVLTSLEQIPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRR 120
Query: 144 XXXXXXXXXXXXGQARVKALKDLRQLVAANVFARRTVSENGGLALVCSLLGPFTSHAVGS 203
A ++ + + +L + R+ V ENG ++C F+ +A S
Sbjct: 121 GDYA----------ACMEMVTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANAS 170
Query: 204 ----EAIGIIV-NLDLVSELKRNLMHPAKVSLLVDIMNEGTIETKMNCAKLIEMLLIEGS 258
E + ++ L + E + L + + LV+++ G N A LI+ LL
Sbjct: 171 LLLEETVSVLTWMLPIGLEGQSKLTTTSSFNRLVELLRNG----DQNAAFLIKELL---- 222
Query: 259 GNGNETEIXXXXXXXXXXXXXXXDKKHPTGVLTGLILLKAICXXXXXXXXXXXXXGAVPQ 318
N T + + + LI + + V
Sbjct: 223 -ELNVTHVHALTKINGVQEAFMKSINRDSTCVNSLISIHHMILTNQETVSRFLELDLVNI 281
Query: 319 LIELLPSLNKECLEVALYILEVLSTLPEGRMALKECPNIIPNVVKLLMRVSERCTQFALS 378
+E+L E AL +L V+ EGR ++ +IP +VK ++++SE+ + +S
Sbjct: 282 TVEMLVDSENSVCEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISEK--KDLVS 339
Query: 379 ILWAIYKLAPEECASKAVEAGLAAKLLLVIQSGCNPVLKQMSSEFLKM 426
++W + K +A+ G KL++++Q GC K+ +E LKM
Sbjct: 340 VMWKVCKSGDGSEVEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKM 387
>AT1G67530.2 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 43/66 (65%)
Query: 60 PSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTLT 119
P CPISL+ M DPV + +GQTY+R I KWFS GH TCP T Q+L S+TPN +
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 120 HLILTW 125
LI +W
Sbjct: 333 GLIASW 338
>AT1G67530.1 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 43/66 (65%)
Query: 60 PSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTLT 119
P CPISL+ M DPV + +GQTY+R I KWFS GH TCP T Q+L S+TPN +
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 120 HLILTW 125
LI +W
Sbjct: 333 GLIASW 338
>AT1G24330.1 | Symbols: | ARM repeat superfamily protein |
chr1:8631779-8634835 FORWARD LENGTH=771
Length = 771
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 43/66 (65%)
Query: 60 PSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTLT 119
P CPISL+ M DPV + +GQTY+R I KWFS GH +CP T Q+L S+TPN +
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 120 HLILTW 125
LI +W
Sbjct: 336 GLIASW 341
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
chr1:9720962-9723975 REVERSE LENGTH=768
Length = 768
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 42/66 (63%)
Query: 60 PSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTLT 119
P CPISL+ M DPV + +GQTY+R I KWFS GH TCP T Q+L +TPN +
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVK 339
Query: 120 HLILTW 125
LI +W
Sbjct: 340 ALISSW 345
>AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 |
chr4:11356143-11357267 REVERSE LENGTH=374
Length = 374
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 10/144 (6%)
Query: 56 SIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDS-VTP 114
+ D+P+ F CPISLE M DPV L +G T+DR +I +W G++TCP T L + + P
Sbjct: 2 AFDLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIP 61
Query: 115 NKTLTHLILTWFSHKYLA------MKKKLEDVQGRXXXXXXXXXXXXGQARVKALKDLRQ 168
N L LIL F+H L +++ Q + +++++L L +
Sbjct: 62 NHALRSLILN-FAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVR 120
Query: 169 LVAANVFARRTVSENGGL--ALVC 190
L + RR V+E+G + AL C
Sbjct: 121 LTKRDSSIRRKVTESGAVRAALDC 144
>AT3G54790.2 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284255 REVERSE LENGTH=724
Length = 724
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 50 MIEEMESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWD 109
+E + I +P F CP+S E M DPV + +GQT+DR++I KW G CP T Q L
Sbjct: 193 FLEVAKGISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTH 252
Query: 110 DSVTPNKTLTHLILTWF 126
+ PN T+ +I +W
Sbjct: 253 QELIPNYTVKAMIASWL 269
>AT1G60190.1 | Symbols: | ARM repeat superfamily protein |
chr1:22198403-22200463 FORWARD LENGTH=686
Length = 686
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 20/192 (10%)
Query: 65 CPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTLTHLILT 124
CPISLE M DPV L +G TYDRS+I KWF+ G+ TCP T + L + N ++ +I +
Sbjct: 284 CPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVIQS 343
Query: 125 WFSHKYLAM----KKKLEDVQ-------GRXXXXXXXXXXXXGQAR--VKALKDLRQLVA 171
+ + M KKK++ + G+ G VKAL ++R L
Sbjct: 344 YSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEEMVKALVEIRILTK 403
Query: 172 ANVFARRTVSENGGLALVCSLLGPFTSH--AVGSEAIGIIVNL--DLVSELKRNLMHPAK 227
+ F R + E G +V SL+ S + A+ I+NL D+ + +
Sbjct: 404 TSTFYRSCLVEAG---VVESLMKILRSDDPRIQENAMAGIMNLSKDIAGKTRIVGEDGGG 460
Query: 228 VSLLVDIMNEGT 239
+ L+V+++N+G
Sbjct: 461 LRLIVEVLNDGA 472
>AT3G54790.1 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284363 REVERSE LENGTH=760
Length = 760
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 50 MIEEMESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWD 109
+E + I +P F CP+S E M DPV + +GQT+DR++I KW G CP T Q L
Sbjct: 229 FLEVAKGISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTH 288
Query: 110 DSVTPNKTLTHLILTWF 126
+ PN T+ +I +W
Sbjct: 289 QELIPNYTVKAMIASWL 305
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%)
Query: 53 EMESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSV 112
+ S+ + + F CP+SLE M DPV + +GQTY+++ I +W LG K CP T Q L ++
Sbjct: 227 QTSSVAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTL 286
Query: 113 TPNKTLTHLILTW 125
PN T+ LI W
Sbjct: 287 IPNYTVKALIANW 299
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%)
Query: 53 EMESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSV 112
+ S+ + + F CP+SLE M DPV + +GQTY+++ I +W LG K CP T Q L ++
Sbjct: 224 QTSSVAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTL 283
Query: 113 TPNKTLTHLILTW 125
PN T+ LI W
Sbjct: 284 IPNYTVKALIANW 296
>AT5G37490.1 | Symbols: | ARM repeat superfamily protein |
chr5:14887744-14889051 FORWARD LENGTH=435
Length = 435
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%)
Query: 57 IDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNK 116
I +P F CPIS++ M+DPV + TG TYDR +I W + G+KTCP T L PN
Sbjct: 29 ITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNH 88
Query: 117 TLTHLILTWFSHK 129
T+ +I W K
Sbjct: 89 TIRKMIQGWCVEK 101
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 314 GAVPQLIELLPSLNKECLEVALYILEVLSTLPEGRMALKECPNIIPNVVKLLMRVSERCT 373
G V +E++ E AL +L+ + GR +++ ++P +VK + +VSE T
Sbjct: 298 GLVSITVEMIVDAENSVCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELAT 357
Query: 374 QFALSILWAIYKLAPEECASKAVEAGLAAKLLLVIQSGCNPVLKQMSSEFLKMCSVNYST 433
+ ++S++ ++K AV G K+LLV+Q G K+ ++E LKM +
Sbjct: 358 RSSMSMILKLWKTGNTVAVEDAVRLGAFQKVLLVLQVGYGEETKEKATELLKMMNTQMK- 416
Query: 434 SILISKCMLS 443
L+S C+ S
Sbjct: 417 --LMSDCVDS 424
>AT5G65500.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:26181093-26183997 REVERSE
LENGTH=791
Length = 791
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%)
Query: 51 IEEMESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDD 110
++E + D+PSVF+CPI E M++P G +Y+ I +W S+GH T P T L
Sbjct: 707 MDEGDPNDIPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTSPMTNLRLDYQ 766
Query: 111 SVTPNKTLTHLILTWFSHK 129
+TPN TL LI W S +
Sbjct: 767 MLTPNHTLRSLIQDWHSKR 785
>AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |
chr1:20960356-20962334 REVERSE LENGTH=485
Length = 485
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Query: 22 RKDEGLKIVDVL-----GLESTMKGVEILDLKVMIEEMESIDVPSVFICPISLEPMQDPV 76
R+ E L+IV L G M+ LK E+ME PS F CPI+ E M+DP
Sbjct: 376 REQEELQIVKGLLEFYNGEADAMREERDKALKTAKEQMEKRQPPSSFFCPITQEVMKDPH 435
Query: 77 TLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTLTHLI 122
G TY+ +I KW S GH+T P T L ++ PN+ L I
Sbjct: 436 FAADGFTYEAESIRKWLSTGHQTSPMTNLRLSHLTLVPNRALRSAI 481
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 57 IDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNK 116
+ VPS F C +SLE M DPV + +GQT++R I KW +G CP T Q L ++TPN
Sbjct: 238 VRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNF 297
Query: 117 TLTHLILTW 125
+ + +W
Sbjct: 298 IVRAFLASW 306
>AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 |
chr1:3484613-3486706 FORWARD LENGTH=697
Length = 697
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 38/60 (63%)
Query: 63 FICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTLTHLI 122
+CPISLE M DPV + TG TYDRS+I KWF G+ TCP T + L + N ++ +I
Sbjct: 292 LLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVI 351
>AT5G18340.1 | Symbols: | ARM repeat superfamily protein |
chr5:6070640-6072198 REVERSE LENGTH=456
Length = 456
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 13/110 (11%)
Query: 24 DEGLKIVDVLGL-ESTMKGVEILDLKVMIEEMESIDVPSVFICPISLEPMQDPVTLCTGQ 82
DE ++I++ L + ES + E + S++VP F C +S M DPV + +GQ
Sbjct: 46 DEAIRILNRLKIVESKKRKRE--------SDSSSVEVPKEFKCTLSKTIMIDPVIIFSGQ 97
Query: 83 TYDRSNILKWFSLGHK-TCPTTMQELWDDSVTPNKTLTHLILTW-FSHKY 130
TY++ I +W L H TCPT Q L+ +TPN + LI W ++KY
Sbjct: 98 TYEKRYITEW--LNHDLTCPTAKQVLYRVCLTPNHLINELITRWCLANKY 145
>AT1G01660.1 | Symbols: | RING/U-box superfamily protein |
chr1:240057-242608 REVERSE LENGTH=568
Length = 568
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 60 PSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTLT 119
PS FICPIS E M++P G TY+ ++ +W GH+T P T +L +++ PN L
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 120 HLILTWF 126
I W
Sbjct: 558 SAIQEWL 564
>AT2G45920.1 | Symbols: | U-box domain-containing protein |
chr2:18899363-18901097 FORWARD LENGTH=400
Length = 400
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 35/72 (48%)
Query: 55 ESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTP 114
E + P FICPISLE M+DP G TY+ I W GH+T P T +L + P
Sbjct: 321 EHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVP 380
Query: 115 NKTLTHLILTWF 126
N L I W
Sbjct: 381 NLALRSAIQEWL 392
>AT3G61390.2 | Symbols: | RING/U-box superfamily protein |
chr3:22716418-22718270 FORWARD LENGTH=435
Length = 435
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 43 EILDLKVMIEEMES-----IDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGH 97
E+ LK EE E+ + P FICPI+ + M+DP G TY+ I +WF GH
Sbjct: 332 EVSKLKGKREEEEASTSNHREPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGH 391
Query: 98 KTCPTTMQELWDDSVTPNKTLTHLILTWF 126
+T P + L S+ PN L I W
Sbjct: 392 ETSPMINKRLPHTSLVPNLALRSAIQEWL 420
>AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 |
senescence-associated E3 ubiquitin ligase 1 |
chr1:7217812-7220609 FORWARD LENGTH=801
Length = 801
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 63 FICPISLEPMQDPVTLCTGQTYDRSNILKWF-----SLGHKTCPTTMQELWDDSVTPNKT 117
FICP++ E M DPVTL G+T++R I KWF S +CP T QEL V+ +
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASIA 86
Query: 118 LTHLILTWFSHKYLA 132
L + I W S A
Sbjct: 87 LRNTIEEWRSRNDAA 101
>AT4G36550.1 | Symbols: | ARM repeat superfamily protein |
chr4:17245400-17247926 REVERSE LENGTH=718
Length = 718
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 59 VPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTL 118
+P F C +S M DPV + +G T++R I KWF G+ +CP + ++L D ++ PN L
Sbjct: 219 LPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVEL 278
Query: 119 THLILTW 125
I W
Sbjct: 279 KSQISEW 285
>AT2G19410.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:8404901-8409012 REVERSE LENGTH=801
Length = 801
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 20 KDRKDEGLKIVDVLGLESTMKGVEILDLKVMIEEMESIDVPSVFICPISLEPMQDPVTLC 79
+DR D +++ VL + VE + KV +E ++ PS + CPI E M++P
Sbjct: 692 RDRPDLKSEVIPVL-----KRLVETANSKVK-KEGSNLRAPSHYFCPILREIMEEPEIAA 745
Query: 80 TGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTLTHLILTWFSH 128
G TY+R IL W H P T Q+L +TPN TL I W S
Sbjct: 746 DGFTYERKAILAWLE-KHNISPVTRQKLDHFKLTPNHTLRSAIRDWKSR 793
>AT5G18330.1 | Symbols: | ARM repeat superfamily protein |
chr5:6068474-6070042 REVERSE LENGTH=445
Length = 445
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 53 EMESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGH-KTCPTTMQELWDDS 111
++ ++VP FIC +S + M +P+ + +GQT+++S IL+W L H +TCP T Q L+
Sbjct: 59 DISPVEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEW--LKHERTCPRTKQVLYHRF 116
Query: 112 VTPNKTLTHLILTW 125
+ PN + +I W
Sbjct: 117 MIPNHLINEVIKEW 130
>AT1G01670.1 | Symbols: | RING/U-box superfamily protein |
chr1:242943-245163 REVERSE LENGTH=365
Length = 365
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 23 KDEGLKIVDVLGLESTMKGVEILDLKVMIEEMESIDVPSVFICPISLEPMQDPVTLCTGQ 82
+DE +K + L L + KG + L+ + SI+ P FICPIS + MQ+P G
Sbjct: 263 RDEAIKTTEEL-LRALEKGESSIPLQWSV----SIEPPQCFICPISKDIMQNPHVAADGY 317
Query: 83 TYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTLTHLILTWF 126
TY+ +W + G + P T L + ++ PN L I W
Sbjct: 318 TYEADEFRRWLNHGGEKSPMTNLRLENRNLIPNLVLRSAIKDWL 361
>AT1G76390.2 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 58 DVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHK-----TCPTTMQELWDDSV 112
++ FICP++ + M +PVTL GQT++R I KWF + +CP T +EL +
Sbjct: 24 NIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDL 83
Query: 113 TPNKTLTHLILTW 125
+P+ L + I W
Sbjct: 84 SPSIALRNTIEEW 96
>AT1G76390.1 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 58 DVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHK-----TCPTTMQELWDDSV 112
++ FICP++ + M +PVTL GQT++R I KWF + +CP T +EL +
Sbjct: 24 NIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDL 83
Query: 113 TPNKTLTHLILTW 125
+P+ L + I W
Sbjct: 84 SPSIALRNTIEEW 96
>AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 |
chr1:246411-248329 REVERSE LENGTH=308
Length = 308
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 55 ESIDVPSV--FICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSV 112
ES + P + F CPIS+E M+DP G TY+ KW G +T P T + L + ++
Sbjct: 227 ESDEDPRLEDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNL 286
Query: 113 TPNKTLTHLILTW 125
PN TL +I W
Sbjct: 287 VPNHTLRIIIKDW 299
>AT5G18320.1 | Symbols: | ARM repeat superfamily protein |
chr5:6064431-6066186 REVERSE LENGTH=458
Length = 458
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 48 KVMIEEMESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGH-KTCPTTMQE 106
K+ ++ ++VP FIC +S M +PV + +GQTY++ I +W L H +TCP T Q
Sbjct: 61 KIPESDISPVEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEW--LKHERTCPKTKQV 118
Query: 107 LWDDSVTPNKTLTHLILTW-FSHKY 130
L PN ++ LI W +KY
Sbjct: 119 LSHRLWIPNHLISDLITQWCLVNKY 143
>AT5G57035.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:23080743-23083819 FORWARD
LENGTH=789
Length = 789
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 36/85 (42%)
Query: 53 EMESIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSV 112
E + P+ + CPI E M+DP G TY+R I +W P T L +
Sbjct: 702 EQANARAPTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDL 761
Query: 113 TPNKTLTHLILTWFSHKYLAMKKKL 137
TPN TL I W S L + L
Sbjct: 762 TPNHTLRSAIREWRSRSRLDLSTTL 786
>AT2G45910.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:18894520-18898212 FORWARD
LENGTH=834
Length = 834
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 30/70 (42%)
Query: 59 VPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTL 118
P FICPI E MQDP G TY+ I W H T P T +L S+ N L
Sbjct: 763 APPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHAL 822
Query: 119 THLILTWFSH 128
I W H
Sbjct: 823 RSAIQEWLQH 832
>AT3G49060.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187386-18191878 REVERSE
LENGTH=805
Length = 805
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 60 PSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTLT 119
PS ++CPI E M+DP+ G TY+ I +W + GH T P T ++ D ++ PN L
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 120 HLILTW 125
I W
Sbjct: 796 LAIQDW 801
>AT3G49060.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187054-18191878 REVERSE
LENGTH=795
Length = 795
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 60 PSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTLT 119
PS ++CPI E M+DP+ G TY+ I +W + GH T P T ++ D ++ PN L
Sbjct: 726 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 785
Query: 120 HLILTW 125
I W
Sbjct: 786 LAIQDW 791
>AT5G51270.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:20835137-20838262 REVERSE
LENGTH=819
Length = 819
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 60 PSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTLT 119
PS F CP+ + M++P G TYDR I +W H+T P T L + ++ PN TL
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWME-NHRTSPVTNSPLQNVNLLPNHTLY 808
Query: 120 HLILTW 125
I+ W
Sbjct: 809 AAIVEW 814
>AT4G25160.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr4:12903360-12906669 REVERSE
LENGTH=835
Length = 835
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 56 SIDVPSVFICPISLEPMQDPVTLCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPN 115
S P+ FICP+ + M +P G TYDR I +W H T P T L ++ PN
Sbjct: 763 STQPPTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLK-EHNTSPMTDSPLHSKNLLPN 821
Query: 116 KTLTHLILTWFSHK 129
TL I+ W S +
Sbjct: 822 YTLYTAIMEWRSTR 835
>AT3G02840.1 | Symbols: | ARM repeat superfamily protein |
chr3:618480-619619 FORWARD LENGTH=379
Length = 379
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query: 319 LIELLPSL-----NKECLEVALYILEVLSTLPEGRMALKECPNIIPNVVKLLMRVSERCT 373
L+EL+ + K E +L +L +G+ + I+P +VK ++RVS+ T
Sbjct: 235 LVELITEMMVNNAEKSVCERSLVVLNATCDNEQGKEDVLRNALIVPLLVKKILRVSDLAT 294
Query: 374 QFALSILWAIYKLAPE-ECASK----AVEAGLAAKLLLVIQSGCNPVLKQMSSEFLK 425
Q ++SILW ++K + EC + A++ G KLL+++Q GC K+ +SE L+
Sbjct: 295 QCSVSILWKLWKNKKDGECDDRLLVEALQVGAFEKLLVLLQVGCEDKTKEKASELLR 351
>AT5G61560.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=794
Length = 794
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 20 KDRKDEGLKIVDVLGLESTMKGVEILDLKVMIEEM--ESIDVPSVFICPISLEPMQDPVT 77
+DR D G +I+ VL +K V + + + + + P+ F CPI+ + M++P
Sbjct: 685 RDRPDLGKEILPVL---ERLKEVASIARNMFADNLIDHHHNAPTHFYCPITKDVMENPCV 741
Query: 78 LCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTLTHLILTWFSH 128
G TY++ I +W HK+ P T DS+ PN +L I W S
Sbjct: 742 ASDGYTYEKRAIKEWLQKNHKS-PMTDLPFPSDSLLPNHSLLSAIKEWRSQ 791
>AT5G61560.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=796
Length = 796
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 20 KDRKDEGLKIVDVLGLESTMKGVEILDLKVMIEEM--ESIDVPSVFICPISLEPMQDPVT 77
+DR D G +I+ VL +K V + + + + + P+ F CPI+ + M++P
Sbjct: 687 RDRPDLGKEILPVL---ERLKEVASIARNMFADNLIDHHHNAPTHFYCPITKDVMENPCV 743
Query: 78 LCTGQTYDRSNILKWFSLGHKTCPTTMQELWDDSVTPNKTLTHLILTWFS 127
G TY++ I +W HK+ P T DS+ PN +L I W S
Sbjct: 744 ASDGYTYEKRAIKEWLQKNHKS-PMTDLPFPSDSLLPNHSLLSAIKEWRS 792