Miyakogusa Predicted Gene

Lj1g3v1720220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1720220.1 Non Chatacterized Hit- tr|I1JTQ4|I1JTQ4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8919
PE=,76.1,0,UBA-like,UBA-like; CUE,Ubiquitin system component Cue;
SUBFAMILY NOT NAMED,NULL; ACTIVATING SIGNAL C,CUFF.27720.1
         (852 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G27752.1 | Symbols:  | Ubiquitin system component Cue protein...   625   e-179
AT1G27752.2 | Symbols:  | Ubiquitin system component Cue protein...   478   e-135

>AT1G27752.1 | Symbols:  | Ubiquitin system component Cue protein |
           chr1:9662250-9667318 FORWARD LENGTH=873
          Length = 873

 Score =  625 bits (1612), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 361/807 (44%), Positives = 474/807 (58%), Gaps = 43/807 (5%)

Query: 66  FVKYLPQXXXXXXXXXXXXXXXXPIESQRVVDXXXXXXXXXXXXXPKEFWKQVAADTSLH 125
           FV YLPQ                P+ESQ VVD             P++FW++VA+D SLH
Sbjct: 90  FVNYLPQDEAVAAGLGPDDGGLDPVESQGVVDLLNRELTRLLKLNPRDFWREVASDASLH 149

Query: 126 AFLDSFLQFRSRWYDFPHRGVKGILAGVIVGEIDLSRRVFMVLYRISSNKDPGGRPADTL 185
            FLDSFLQFRSRWYDFP  GVKGI+AGVIVGE++L RRVFMVLYRISSN+DPG + AD+L
Sbjct: 150 DFLDSFLQFRSRWYDFPFHGVKGIVAGVIVGELELCRRVFMVLYRISSNRDPGAKAADSL 209

Query: 186 SSRDHGVXXXXXXXXXXXXXXDICAIYYHENEELTRLLVRNALSAQPWIHNSLPSVISHF 245
           S +DH V              DICAIY HEN ELT+ L+ NA+ +Q  I  SL  ++SHF
Sbjct: 210 SQKDHEVLLQDKKLLDLPKLLDICAIYGHENAELTKSLIENAVKSQNGISESLNMMLSHF 269

Query: 246 MGIVSTMHERCXXXXXXXXXXXXPDNQNATFLQADLLEVMDFINDAIVSLDAFVNTFEPA 305
           +GI+ TMH RC             ++     L +DLLEVMDFIND +VSLDAF++ + PA
Sbjct: 270 LGILHTMHHRCTSSLETLVSSANSEDHGRRQLHSDLLEVMDFINDGVVSLDAFISAYTPA 329

Query: 306 AVFFSCPVEMSYGNEEXXXXXXXXXXXXIPSLQKGFQIIFADKQDDRVSNTLVSLKMLRI 365
               +CPVE SYG++E            +PSL +GFQ++F D+  D +S+   SL ML  
Sbjct: 330 VFILACPVETSYGSDELLRSLVRLHDSLLPSLHRGFQVLFKDEDHDSLSDISTSLNMLST 389

Query: 366 RLVNFGWQLLHFCYLSDEVFRDSIPLAAVTKMFPANVEDPVIRADILVQTLREINSVSLC 425
           R+ +  W++L  CYLS++ F     + AVTKMFP+ VEDP++RADIL+QT REI+ +S  
Sbjct: 390 RIGSLCWKILDICYLSNDKFNHETSIPAVTKMFPSRVEDPMVRADILIQTFREISGLS-- 447

Query: 426 FQEILPKKTFLQDVERNFNLLSRIERLKDNGWIFMDDEQFQYISGILXXXXXXXXXXXXT 485
            Q +  K   LQ +E+N+ ++ R+  L++ GWI M+DEQ QY+S I+             
Sbjct: 448 EQSLESKNRLLQKIEKNYRIIDRLRSLQNAGWISMEDEQLQYLSMIMLHSADTFSMKESP 507

Query: 486 --MTTVPNQALRMDEDAAIIESKISQIRDLFPDYGKGFLAACLEVYDQNPEEVIQRILED 543
             +T   N    MDE+A +++SKISQI+D+FP+YG GFLAACLE Y+QNPEEVIQRILE 
Sbjct: 508 LLLTDGRNAEELMDENAVVMQSKISQIKDIFPEYGNGFLAACLEAYNQNPEEVIQRILEG 567

Query: 544 TLHEDLRCLDTSLETVPQSLAKTTTVSRIDKGKGKLIDXXXXXXXXXXXXGKQQTEAPLM 603
           TLHEDL+ LDTSLET+PQ  +  T  S+ DKGKGKLI+                TE P+ 
Sbjct: 568 TLHEDLQRLDTSLETMPQPKSAPTLRSK-DKGKGKLIESDTSSSASAIY-----TEKPIT 621

Query: 604 PSSAP--------LGKFIRKSRADAPPDLSILDKKDEKDVLK-TAMLSQXXXXXXXXXXX 654
             S P        +G+F+RK + D  P   ILD + E D  +  A+L+Q           
Sbjct: 622 RPSLPASSASSATVGRFVRKPKDDT-PSYKILDARKESDRERNAALLAQYEYDDEYDDSF 680

Query: 655 XXLGLSVGDSGLEENEILGDKMNAMPQSWAKETGNSGQNAPNAKWGSKKKPQFYVKDGKN 714
             LGLS+ +SG EE+   G++  + P            +AP  KWGS+K PQFYVKDGKN
Sbjct: 681 DDLGLSIAESGTEESGAFGNRAGSEP-----------SDAP--KWGSRKNPQFYVKDGKN 727

Query: 715 YSYKVAGATAVANSDEASLLNQAQKELIHGLGRGGNHPFGAVRKFTEF---KDNDNQS-- 769
           YSYKVAGA AVAN++EASL+N+A+ + I GLGRGGN P GAVRK TE+   +D   QS  
Sbjct: 728 YSYKVAGAVAVANANEASLVNEAEGDKILGLGRGGNIPLGAVRKLTEYQAQRDEKGQSNV 787

Query: 770 HVSETEGRGVLXXXXXXXXXXXXKQTEPHQPQE----TQSNGSEMEGQDHVSNNXXXXXX 825
           +V+ ++GR                     QPQE    + +N SE+  +            
Sbjct: 788 NVNPSDGRENGRNWRGVRGRGRGVVNR-EQPQEKSNESSNNNSEVNTEAENGGGRGRGRG 846

Query: 826 XXXXXXXSNHYRKDQAMKKHFSGLGGF 852
                   NH  KD+AMKKH + + GF
Sbjct: 847 RRGGGGGRNHNHKDRAMKKHIASVSGF 873


>AT1G27752.2 | Symbols:  | Ubiquitin system component Cue protein |
           chr1:9663144-9667318 FORWARD LENGTH=656
          Length = 656

 Score =  478 bits (1231), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 286/665 (43%), Positives = 386/665 (58%), Gaps = 43/665 (6%)

Query: 208 ICAIYYHENEELTRLLVRNALSAQPWIHNSLPSVISHFMGIVSTMHERCXXXXXXXXXXX 267
           ICAIY HEN ELT+ L+ NA+ +Q  I  SL  ++SHF+GI+ TMH RC           
Sbjct: 15  ICAIYGHENAELTKSLIENAVKSQNGISESLNMMLSHFLGILHTMHHRCTSSLETLVSSA 74

Query: 268 XPDNQNATFLQADLLEVMDFINDAIVSLDAFVNTFEPAAVFFSCPVEMSYGNEEXXXXXX 327
             ++     L +DLLEVMDFIND +VSLDAF++ + PA    +CPVE SYG++E      
Sbjct: 75  NSEDHGRRQLHSDLLEVMDFINDGVVSLDAFISAYTPAVFILACPVETSYGSDELLRSLV 134

Query: 328 XXXXXXIPSLQKGFQIIFADKQDDRVSNTLVSLKMLRIRLVNFGWQLLHFCYLSDEVFRD 387
                 +PSL +GFQ++F D+  D +S+   SL ML  R+ +  W++L  CYLS++ F  
Sbjct: 135 RLHDSLLPSLHRGFQVLFKDEDHDSLSDISTSLNMLSTRIGSLCWKILDICYLSNDKFNH 194

Query: 388 SIPLAAVTKMFPANVEDPVIRADILVQTLREINSVSLCFQEILPKKTFLQDVERNFNLLS 447
              + AVTKMFP+ VEDP++RADIL+QT REI+ +S   Q +  K   LQ +E+N+ ++ 
Sbjct: 195 ETSIPAVTKMFPSRVEDPMVRADILIQTFREISGLS--EQSLESKNRLLQKIEKNYRIID 252

Query: 448 RIERLKDNGWIFMDDEQFQYISGILXXXXXXXXXXXX--TMTTVPNQALRMDEDAAIIES 505
           R+  L++ GWI M+DEQ QY+S I+               +T   N    MDE+A +++S
Sbjct: 253 RLRSLQNAGWISMEDEQLQYLSMIMLHSADTFSMKESPLLLTDGRNAEELMDENAVVMQS 312

Query: 506 KISQIRDLFPDYGKGFLAACLEVYDQNPEEVIQRILEDTLHEDLRCLDTSLETVPQSLAK 565
           KISQI+D+FP+YG GFLAACLE Y+QNPEEVIQRILE TLHEDL+ LDTSLET+PQ  + 
Sbjct: 313 KISQIKDIFPEYGNGFLAACLEAYNQNPEEVIQRILEGTLHEDLQRLDTSLETMPQPKSA 372

Query: 566 TTTVSRIDKGKGKLIDXXXXXXXXXXXXGKQQTEAPLMPSSAP--------LGKFIRKSR 617
            T  S+ DKGKGKLI+                TE P+   S P        +G+F+RK +
Sbjct: 373 PTLRSK-DKGKGKLIESDTSSSASAIY-----TEKPITRPSLPASSASSATVGRFVRKPK 426

Query: 618 ADAPPDLSILDKKDEKDVLK-TAMLSQXXXXXXXXXXXXXLGLSVGDSGLEENEILGDKM 676
            D  P   ILD + E D  +  A+L+Q             LGLS+ +SG EE+   G++ 
Sbjct: 427 DDT-PSYKILDARKESDRERNAALLAQYEYDDEYDDSFDDLGLSIAESGTEESGAFGNRA 485

Query: 677 NAMPQSWAKETGNSGQNAPNAKWGSKKKPQFYVKDGKNYSYKVAGATAVANSDEASLLNQ 736
            + P            +AP  KWGS+K PQFYVKDGKNYSYKVAGA AVAN++EASL+N+
Sbjct: 486 GSEP-----------SDAP--KWGSRKNPQFYVKDGKNYSYKVAGAVAVANANEASLVNE 532

Query: 737 AQKELIHGLGRGGNHPFGAVRKFTEF---KDNDNQS--HVSETEGRGVLXXXXXXXXXXX 791
           A+ + I GLGRGGN P GAVRK TE+   +D   QS  +V+ ++GR              
Sbjct: 533 AEGDKILGLGRGGNIPLGAVRKLTEYQAQRDEKGQSNVNVNPSDGRENGRNWRGVRGRGR 592

Query: 792 XKQTEPHQPQE----TQSNGSEMEGQDHVSNNXXXXXXXXXXXXXSNHYRKDQAMKKHFS 847
                  QPQE    + +N SE+  +                    NH  KD+AMKKH +
Sbjct: 593 GVVNR-EQPQEKSNESSNNNSEVNTEAENGGGRGRGRGRRGGGGGRNHNHKDRAMKKHIA 651

Query: 848 GLGGF 852
            + GF
Sbjct: 652 SVSGF 656