Miyakogusa Predicted Gene
- Lj1g3v1720090.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1720090.3 Non Chatacterized Hit- tr|I3SUF5|I3SUF5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,82.35,2e-18,Histidine-containing phosphotransfer domain, HPT
domain,Signal transduction histidine kinase, phosph,CUFF.27722.3
(88 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G21510.1 | Symbols: AHP1 | histidine-containing phosphotransm... 72 1e-13
AT1G03430.1 | Symbols: AHP5 | histidine-containing phosphotransf... 69 7e-13
AT3G29350.1 | Symbols: AHP2 | histidine-containing phosphotransm... 65 1e-11
AT5G39340.1 | Symbols: AHP3, ATHP2 | histidine-containing phosph... 60 2e-10
AT3G29350.2 | Symbols: AHP2 | histidine-containing phosphotransm... 59 5e-10
AT3G16360.1 | Symbols: AHP4 | HPT phosphotransmitter 4 | chr3:55... 54 2e-08
AT3G16360.2 | Symbols: AHP4 | HPT phosphotransmitter 4 | chr3:55... 54 2e-08
AT1G80100.2 | Symbols: AHP6, HP6 | histidine phosphotransfer pro... 49 5e-07
AT1G80100.1 | Symbols: AHP6, HP6 | histidine phosphotransfer pro... 49 9e-07
>AT3G21510.1 | Symbols: AHP1 | histidine-containing
phosphotransmitter 1 | chr3:7578432-7579537 REVERSE
LENGTH=154
Length = 154
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 13 EQVLVDFKQVDAHVHQYEGSSASVGTARVKNLCIPFRKICETQNLEGCAWC 63
+Q +VDFK+VD HVHQ +GSS+S+G RVKN C+ FR CE QN+E C C
Sbjct: 65 DQQVVDFKKVDPHVHQLKGSSSSIGAQRVKNACVVFRSFCEQQNVEACHRC 115
>AT1G03430.1 | Symbols: AHP5 | histidine-containing phosphotransfer
factor 5 | chr1:848159-849235 FORWARD LENGTH=157
Length = 157
Score = 68.9 bits (167), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 17 VDFKQVDAHVHQYEGSSASVGTARVKNLCIPFRKICETQNLEGCAWC 63
VDFKQVD+ VHQ +GSS+SVG RVKN+CI F++ C+ QN EGC C
Sbjct: 73 VDFKQVDSGVHQLKGSSSSVGARRVKNVCISFKECCDVQNREGCLRC 119
>AT3G29350.1 | Symbols: AHP2 | histidine-containing
phosphotransmitter 2 | chr3:11264379-11265408 REVERSE
LENGTH=156
Length = 156
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 34/47 (72%)
Query: 17 VDFKQVDAHVHQYEGSSASVGTARVKNLCIPFRKICETQNLEGCAWC 63
VDF QV A VHQ +GSS+SVG RVK LC+ F++ CE +N EGC C
Sbjct: 72 VDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRC 118
>AT5G39340.1 | Symbols: AHP3, ATHP2 | histidine-containing
phosphotransmitter 3 | chr5:15748941-15750248 FORWARD
LENGTH=155
Length = 155
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 17 VDFKQVDAHVHQYEGSSASVGTARVKNLCIPFRKICETQNLEGCAWC 63
VDFK V + VHQ +GSS+SVG RVK LC+ ++ C++QN EGC C
Sbjct: 72 VDFKLVGSSVHQLKGSSSSVGAKRVKGLCVTLKECCDSQNYEGCVRC 118
>AT3G29350.2 | Symbols: AHP2 | histidine-containing
phosphotransmitter 2 | chr3:11264682-11265408 REVERSE
LENGTH=114
Length = 114
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 32/43 (74%)
Query: 17 VDFKQVDAHVHQYEGSSASVGTARVKNLCIPFRKICETQNLEG 59
VDF QV A VHQ +GSS+SVG RVK LC+ F++ CE +N EG
Sbjct: 72 VDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEG 114
>AT3G16360.1 | Symbols: AHP4 | HPT phosphotransmitter 4 |
chr3:5554484-5555367 FORWARD LENGTH=127
Length = 127
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 13 EQVLVDFKQVDAHVHQYEGSSASVGTARVKNLCIPFRKICETQNLEGC 60
E+ DF ++D+++HQ++GSS S+G ++VK C FR+ C N EGC
Sbjct: 54 ERGSFDFNRLDSYMHQFKGSSTSIGASKVKAECTTFREYCRAGNAEGC 101
>AT3G16360.2 | Symbols: AHP4 | HPT phosphotransmitter 4 |
chr3:5554351-5555518 FORWARD LENGTH=145
Length = 145
Score = 53.5 bits (127), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 13 EQVLVDFKQVDAHVHQYEGSSASVGTARVKNLCIPFRKICETQNLEGC 60
E+ DF ++D+++HQ++GSS S+G ++VK C FR+ C N EGC
Sbjct: 60 ERGSFDFNRLDSYMHQFKGSSTSIGASKVKAECTTFREYCRAGNAEGC 107
>AT1G80100.2 | Symbols: AHP6, HP6 | histidine phosphotransfer
protein 6 | chr1:30133818-30134652 FORWARD LENGTH=132
Length = 132
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 8 FTWRREQVLVDFKQVDAHVHQYEGSSASVGTARVKNLCIPFRKICETQNLEGC 60
F RE D+K++ H++Q GSS+S+G RV+N+C+ FR E N GC
Sbjct: 44 FVMDRE--FSDYKKIGLHLNQLVGSSSSIGARRVRNVCVAFRSASELSNRPGC 94
>AT1G80100.1 | Symbols: AHP6, HP6 | histidine phosphotransfer
protein 6 | chr1:30133818-30134652 FORWARD LENGTH=154
Length = 154
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 18 DFKQVDAHVHQYEGSSASVGTARVKNLCIPFRKICETQNLEGC 60
D+K++ H++Q GSS+S+G RV+N+C+ FR E N GC
Sbjct: 74 DYKKIGLHLNQLVGSSSSIGARRVRNVCVAFRSASELSNRPGC 116