Miyakogusa Predicted Gene
- Lj1g3v1720090.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1720090.1 tr|Q9M613|Q9M613_PINTA 26S proteasome regulatory
subunit 8 OS=Pinus taeda PE=2 SV=1,94.34,1e-22,AAA,ATPase, AAA-type,
core; P-loop containing nucleoside triphosphate hydrolases,NULL; 26S
PROTEASE ,CUFF.27722.1
(121 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G20000.1 | Symbols: | AAA-type ATPase family protein | chr5:... 110 2e-25
AT5G19990.1 | Symbols: RPT6A, ATSUG1 | regulatory particle tripl... 110 2e-25
AT1G53750.1 | Symbols: RPT1A | regulatory particle triple-A 1A |... 77 3e-15
AT4G29040.1 | Symbols: RPT2a | regulatory particle AAA-ATPase 2A... 75 8e-15
AT2G20140.1 | Symbols: | AAA-type ATPase family protein | chr2:... 75 8e-15
AT5G58290.1 | Symbols: RPT3 | regulatory particle triple-A ATPas... 75 8e-15
AT5G03340.1 | Symbols: | ATPase, AAA-type, CDC48 protein | chr5... 72 6e-14
AT3G53230.1 | Symbols: | ATPase, AAA-type, CDC48 protein | chr3... 72 6e-14
AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | cell division cy... 72 6e-14
AT1G45000.2 | Symbols: | AAA-type ATPase family protein | chr1:... 72 6e-14
AT5G43010.1 | Symbols: RPT4A | regulatory particle triple-A ATPa... 72 9e-14
AT1G45000.1 | Symbols: | AAA-type ATPase family protein | chr1:... 72 9e-14
AT1G53780.2 | Symbols: | peptidyl-prolyl cis-trans isomerases;h... 71 2e-13
AT1G53780.3 | Symbols: | peptidyl-prolyl cis-trans isomerases;h... 71 2e-13
AT1G53780.1 | Symbols: | peptidyl-prolyl cis-trans isomerases;h... 71 2e-13
AT1G09100.1 | Symbols: RPT5B | 26S proteasome AAA-ATPase subunit... 70 4e-13
AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | regulatory particle trip... 69 6e-13
AT5G53540.1 | Symbols: | P-loop containing nucleoside triphosph... 59 6e-10
AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosph... 59 1e-09
AT4G27680.1 | Symbols: | P-loop containing nucleoside triphosph... 57 2e-09
AT2G30950.1 | Symbols: VAR2, FTSH2 | FtsH extracellular protease... 57 2e-09
AT4G02480.1 | Symbols: | AAA-type ATPase family protein | chr4:... 57 2e-09
AT3G19740.1 | Symbols: | P-loop containing nucleoside triphosph... 57 2e-09
AT1G06430.1 | Symbols: FTSH8 | FTSH protease 8 | chr1:1960214-19... 57 2e-09
AT1G50140.2 | Symbols: | P-loop containing nucleoside triphosph... 57 3e-09
AT1G50140.1 | Symbols: | P-loop containing nucleoside triphosph... 57 3e-09
AT1G03000.1 | Symbols: PEX6 | peroxin 6 | chr1:688057-692453 REV... 57 3e-09
AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosph... 55 7e-09
AT3G56690.1 | Symbols: CIP111 | Cam interacting protein 111 | ch... 55 9e-09
AT1G02890.1 | Symbols: | AAA-type ATPase family protein | chr1:... 55 9e-09
AT1G02890.2 | Symbols: | AAA-type ATPase family protein | chr1:... 55 9e-09
AT5G15250.2 | Symbols: FTSH6 | FTSH protease 6 | chr5:4950411-49... 55 1e-08
AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH protease 6 | chr5:4... 55 1e-08
AT4G28000.1 | Symbols: | P-loop containing nucleoside triphosph... 55 1e-08
AT1G64110.3 | Symbols: | P-loop containing nucleoside triphosph... 55 1e-08
AT1G64110.2 | Symbols: | P-loop containing nucleoside triphosph... 55 1e-08
AT1G64110.1 | Symbols: | P-loop containing nucleoside triphosph... 55 2e-08
AT2G34560.2 | Symbols: | P-loop containing nucleoside triphosph... 53 4e-08
AT2G34560.1 | Symbols: | P-loop containing nucleoside triphosph... 53 4e-08
AT5G64580.1 | Symbols: | AAA-type ATPase family protein | chr5:... 53 5e-08
AT2G29080.1 | Symbols: ftsh3 | FTSH protease 3 | chr2:12489911-1... 53 5e-08
AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC... 52 7e-08
AT4G23940.1 | Symbols: | FtsH extracellular protease family | c... 52 8e-08
AT1G07510.1 | Symbols: ftsh10 | FTSH protease 10 | chr1:2305689-... 51 2e-07
AT1G05910.1 | Symbols: | cell division cycle protein 48-related... 51 2e-07
AT2G26140.1 | Symbols: ftsh4 | FTSH protease 4 | chr2:11131939-1... 50 4e-07
AT3G01610.1 | Symbols: CDC48C, emb1354 | cell division cycle 48C... 50 4e-07
AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 | chr5:23770080-2... 49 6e-07
AT3G15120.1 | Symbols: | P-loop containing nucleoside triphosph... 49 9e-07
AT5G42270.1 | Symbols: VAR1, FTSH5 | FtsH extracellular protease... 48 1e-06
AT1G50250.1 | Symbols: FTSH1 | FTSH protease 1 | chr1:18614398-1... 48 1e-06
AT2G03670.1 | Symbols: CDC48B | cell division cycle 48B | chr2:1... 48 2e-06
AT2G45500.2 | Symbols: | AAA-type ATPase family protein | chr2:... 48 2e-06
AT2G45500.1 | Symbols: | AAA-type ATPase family protein | chr2:... 48 2e-06
AT3G16290.1 | Symbols: EMB2083 | AAA-type ATPase family protein ... 47 2e-06
AT2G27600.1 | Symbols: SKD1, VPS4, ATSKD1 | AAA-type ATPase fami... 47 3e-06
AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 | chr3:17332999-1... 47 3e-06
>AT5G20000.1 | Symbols: | AAA-type ATPase family protein |
chr5:6756915-6759550 FORWARD LENGTH=419
Length = 419
Score = 110 bits (275), Expect = 2e-25, Method: Composition-based stats.
Identities = 50/53 (94%), Positives = 51/53 (96%)
Query: 46 VIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
VIE+PIKHPELFES GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 176 VIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 228
>AT5G19990.1 | Symbols: RPT6A, ATSUG1 | regulatory particle triple-A
ATPase 6A | chr5:6752144-6754918 FORWARD LENGTH=419
Length = 419
Score = 110 bits (275), Expect = 2e-25, Method: Composition-based stats.
Identities = 50/53 (94%), Positives = 51/53 (96%)
Query: 46 VIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
VIE+PIKHPELFES GIAQPKGVLLYGPPGT KTLLARAVAHHTDCTFIRVSG
Sbjct: 176 VIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 228
>AT1G53750.1 | Symbols: RPT1A | regulatory particle triple-A 1A |
chr1:20065921-20068324 REVERSE LENGTH=426
Length = 426
Score = 76.6 bits (187), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/60 (63%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 39 EELRFWRVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
E++R V+E+P+ HPE F GI PKGVL YGPPGT KTLLARAVA+ TD FIRV G
Sbjct: 178 EKMR--EVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIG 235
>AT4G29040.1 | Symbols: RPT2a | regulatory particle AAA-ATPase 2A |
chr4:14312369-14314386 FORWARD LENGTH=443
Length = 443
Score = 75.5 bits (184), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/52 (63%), Positives = 41/52 (78%)
Query: 47 IEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
+E+P+ HPEL+E GI PKGV+LYG PGT KTLLA+AVA+ T TF+RV G
Sbjct: 204 VELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVG 255
>AT2G20140.1 | Symbols: | AAA-type ATPase family protein |
chr2:8692736-8694837 FORWARD LENGTH=443
Length = 443
Score = 75.5 bits (184), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/52 (63%), Positives = 41/52 (78%)
Query: 47 IEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
+E+P+ HPEL+E GI PKGV+LYG PGT KTLLA+AVA+ T TF+RV G
Sbjct: 204 VELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVG 255
>AT5G58290.1 | Symbols: RPT3 | regulatory particle triple-A ATPase 3
| chr5:23569155-23571116 FORWARD LENGTH=408
Length = 408
Score = 75.5 bits (184), Expect = 8e-15, Method: Composition-based stats.
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Query: 38 EEELRFWRVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVS 97
++E+R +E+P+ H EL++ GI P+GVLLYGPPGT KT+LA+AVA+HT FIRV
Sbjct: 164 KQEIR--EAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVV 221
Query: 98 G 98
G
Sbjct: 222 G 222
>AT5G03340.1 | Symbols: | ATPase, AAA-type, CDC48 protein |
chr5:810091-813133 REVERSE LENGTH=810
Length = 810
Score = 72.4 bits (176), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 43/53 (81%)
Query: 46 VIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
++E+P++HP+LF+S G+ PKG+LLYGPPG+ KTL+ARAVA+ T F ++G
Sbjct: 222 LVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCING 274
Score = 65.9 bits (159), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 47 IEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSGKRTSTCGF 106
++ P++HPE FE G++ KGVL YGPPG KTLLA+A+A+ FI V G T F
Sbjct: 496 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 555
Query: 107 QTSRCSCASVR 117
S A+VR
Sbjct: 556 GESE---ANVR 563
>AT3G53230.1 | Symbols: | ATPase, AAA-type, CDC48 protein |
chr3:19723416-19726489 FORWARD LENGTH=815
Length = 815
Score = 72.4 bits (176), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 43/53 (81%)
Query: 46 VIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
++E+P++HP+LF+S G+ PKG+LLYGPPG+ KTL+ARAVA+ T F ++G
Sbjct: 223 LVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCING 275
Score = 65.5 bits (158), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 47 IEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSGKRTSTCGF 106
++ P++HPE FE G++ KGVL YGPPG KTLLA+A+A+ FI + G T F
Sbjct: 497 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF 556
Query: 107 QTSRCSCASVR 117
S A+VR
Sbjct: 557 GESE---ANVR 564
>AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | cell division cycle
48 | chr3:3019494-3022832 FORWARD LENGTH=809
Length = 809
Score = 72.4 bits (176), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 43/53 (81%)
Query: 46 VIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
++E+P++HP+LF+S G+ PKG+LLYGPPG+ KTL+ARAVA+ T F ++G
Sbjct: 222 LVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCING 274
Score = 65.9 bits (159), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 47 IEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSGKRTSTCGF 106
++ P++HPE FE G++ KGVL YGPPG KTLLA+A+A+ FI V G T F
Sbjct: 496 VQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 555
Query: 107 QTSRCSCASVR 117
S A+VR
Sbjct: 556 GESE---ANVR 563
>AT1G45000.2 | Symbols: | AAA-type ATPase family protein |
chr1:17009220-17011607 FORWARD LENGTH=335
Length = 335
Score = 72.4 bits (176), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 39/50 (78%)
Query: 47 IEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRV 96
IE+P+ +PELF GI PKGVLLYGPPGT KTLLARA+A + D F++V
Sbjct: 155 IELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKV 204
>AT5G43010.1 | Symbols: RPT4A | regulatory particle triple-A ATPase
4A | chr5:17248563-17251014 REVERSE LENGTH=399
Length = 399
Score = 71.6 bits (174), Expect = 9e-14, Method: Composition-based stats.
Identities = 35/57 (61%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Query: 40 ELRFWRVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRV 96
ELR IE+P+ +PELF GI PKGVLLYGPPGT KTLLARA+A + D F++V
Sbjct: 150 ELR--ESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKV 204
>AT1G45000.1 | Symbols: | AAA-type ATPase family protein |
chr1:17009220-17011607 FORWARD LENGTH=399
Length = 399
Score = 71.6 bits (174), Expect = 9e-14, Method: Composition-based stats.
Identities = 35/57 (61%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Query: 40 ELRFWRVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRV 96
ELR IE+P+ +PELF GI PKGVLLYGPPGT KTLLARA+A + D F++V
Sbjct: 150 ELR--ESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKV 204
>AT1G53780.2 | Symbols: | peptidyl-prolyl cis-trans
isomerases;hydrolases;nucleoside-triphosphatases;ATP
binding;nucleotide binding;ATPases |
chr1:20074212-20077713 REVERSE LENGTH=620
Length = 620
Score = 70.9 bits (172), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 39 EELRFWRVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
E++R V+E+P+ HPE F GI PKGVL YGPPG+ KTL+ARAVA+ T FIRV G
Sbjct: 371 EKIR--EVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVG 428
>AT1G53780.3 | Symbols: | peptidyl-prolyl cis-trans
isomerases;hydrolases;nucleoside-triphosphatases;ATP
binding;nucleotide binding;ATPases |
chr1:20074212-20077235 REVERSE LENGTH=599
Length = 599
Score = 70.9 bits (172), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 39 EELRFWRVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
E++R V+E+P+ HPE F GI PKGVL YGPPG+ KTL+ARAVA+ T FIRV G
Sbjct: 350 EKIR--EVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVG 407
>AT1G53780.1 | Symbols: | peptidyl-prolyl cis-trans
isomerases;hydrolases;nucleoside-triphosphatases;ATP
binding;nucleotide binding;ATPases |
chr1:20074212-20077235 REVERSE LENGTH=598
Length = 598
Score = 70.9 bits (172), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 39 EELRFWRVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
E++R V+E+P+ HPE F GI PKGVL YGPPG+ KTL+ARAVA+ T FIRV G
Sbjct: 349 EKIR--EVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVG 406
>AT1G09100.1 | Symbols: RPT5B | 26S proteasome AAA-ATPase subunit
RPT5B | chr1:2936675-2939258 REVERSE LENGTH=423
Length = 423
Score = 69.7 bits (169), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 39/52 (75%)
Query: 47 IEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
I +P+ H E FE GI PKGVLLYGPPGT KTL+ARA A T+ TF++++G
Sbjct: 186 IVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAG 237
>AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | regulatory particle
triple-A ATPase 5A | chr3:1603540-1605993 FORWARD
LENGTH=424
Length = 424
Score = 69.3 bits (168), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 47 IEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
I +P+ H E FE G+ PKGVLLYGPPGT KTL+ARA A T+ TF++++G
Sbjct: 187 IVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAG 238
>AT5G53540.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:21749561-21751099
REVERSE LENGTH=403
Length = 403
Score = 59.3 bits (142), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 43 FWRVIEVPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRV 96
+ ++ +P+K PELF + P KGVLLYGPPGT KT+LA+A+A ++ FI V
Sbjct: 99 LYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIARESEAVFINV 153
>AT4G24860.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:12801580-12808190
REVERSE LENGTH=1122
Length = 1122
Score = 58.5 bits (140), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 46 VIEVPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRVS 97
++ +P++ PELF + +P KG+LL+GPPGT KT+LA+AVA D FI +S
Sbjct: 835 LVMLPLQRPELFCKGELTKPCKGILLFGPPGTGKTMLAKAVAKEADANFINIS 887
>AT4G27680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:13821263-13823083
FORWARD LENGTH=398
Length = 398
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 43 FWRVIEVPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRV 96
+ ++ +P+K PELF + P KGVLLYGPPGT KT+LA+A+A + FI V
Sbjct: 96 LYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINV 150
>AT2G30950.1 | Symbols: VAR2, FTSH2 | FtsH extracellular protease
family | chr2:13174692-13177064 FORWARD LENGTH=695
Length = 695
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 38 EEELRFWRVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVS 97
E + F V+E +K PE F + G PKGVLL GPPGT KTLLA+A+A F +S
Sbjct: 234 EAKQDFMEVVEF-LKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSIS 292
Query: 98 G 98
G
Sbjct: 293 G 293
>AT4G02480.1 | Symbols: | AAA-type ATPase family protein |
chr4:1082082-1088680 REVERSE LENGTH=1265
Length = 1265
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 46 VIEVPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRVS 97
++ +P++ PELF+ + +P KG+LL+GPPGT KT+LA+AVA FI +S
Sbjct: 978 LVMLPLQRPELFDKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAGANFINIS 1030
>AT3G19740.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6855944-6862930
REVERSE LENGTH=993
Length = 993
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 46 VIEVPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSGKRTSTC 104
++ +P++ PELF + +P KG+LL+GPPGT KTLLA+A+A FI ++G ++
Sbjct: 719 LVILPMRRPELFTRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSK 778
Query: 105 GF 106
F
Sbjct: 779 WF 780
>AT1G06430.1 | Symbols: FTSH8 | FTSH protease 8 |
chr1:1960214-1962525 REVERSE LENGTH=685
Length = 685
Score = 57.0 bits (136), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 38 EEELRFWRVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVS 97
E + F V+E +K PE F + G PKGVLL GPPGT KTLLA+A+A F +S
Sbjct: 227 EAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSIS 285
Query: 98 G 98
G
Sbjct: 286 G 286
>AT1G50140.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:18569921-18578663
REVERSE LENGTH=981
Length = 981
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 46 VIEVPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSGKRTSTC 104
++ +P++ PELF + +P KG+LL+GPPGT KTLLA+A+A FI ++G ++
Sbjct: 707 LVILPMRRPELFARGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSK 766
Query: 105 GF 106
F
Sbjct: 767 WF 768
>AT1G50140.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:18569921-18578663
REVERSE LENGTH=1003
Length = 1003
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 46 VIEVPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSGKRTSTC 104
++ +P++ PELF + +P KG+LL+GPPGT KTLLA+A+A FI ++G ++
Sbjct: 729 LVILPMRRPELFARGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSK 788
Query: 105 GF 106
F
Sbjct: 789 WF 790
>AT1G03000.1 | Symbols: PEX6 | peroxin 6 | chr1:688057-692453
REVERSE LENGTH=941
Length = 941
Score = 56.6 bits (135), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 47 IEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
+++P+ H +LF S G+ + GVLLYGPPGT KTLLA+AVA F+ V G
Sbjct: 674 VQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKG 724
>AT5G52882.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:21434155-21438362
REVERSE LENGTH=829
Length = 829
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Query: 46 VIEVPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRVS 97
++ +P++ P+LF+ G+ +P +G+LL+GPPGT KT+LA+A+A+ +FI VS
Sbjct: 532 LVMLPLRRPDLFQG-GLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVS 583
>AT3G56690.1 | Symbols: CIP111 | Cam interacting protein 111 |
chr3:20993869-20998531 REVERSE LENGTH=1022
Length = 1022
Score = 55.5 bits (132), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 42 RFWRVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
+ +E P KH + F+ G P G+L++GPPG KTL+ARAVA F+ V G
Sbjct: 735 QLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKG 791
>AT1G02890.1 | Symbols: | AAA-type ATPase family protein |
chr1:645372-651797 REVERSE LENGTH=1246
Length = 1246
Score = 55.5 bits (132), Expect = 9e-09, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 46 VIEVPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRVS 97
++ +P++ PELF + +P KG+LL+GPPGT KT+LA+AVA FI +S
Sbjct: 959 LVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAGANFINIS 1011
>AT1G02890.2 | Symbols: | AAA-type ATPase family protein |
chr1:645372-651797 REVERSE LENGTH=1218
Length = 1218
Score = 55.1 bits (131), Expect = 9e-09, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 46 VIEVPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRVS 97
++ +P++ PELF + +P KG+LL+GPPGT KT+LA+AVA FI +S
Sbjct: 959 LVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAGANFINIS 1011
>AT5G15250.2 | Symbols: FTSH6 | FTSH protease 6 |
chr5:4950411-4952771 REVERSE LENGTH=709
Length = 709
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 38 EEELRFWRVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVS 97
E + F ++E +K PE F + G PKGVLL GPPGT KTLLA+A+A F +S
Sbjct: 229 EAKQDFEEIVEF-LKTPEKFSALGAKIPKGVLLTGPPGTGKTLLAKAIAGEAGVPFFSLS 287
Query: 98 G 98
G
Sbjct: 288 G 288
>AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH protease 6 |
chr5:4950411-4952777 REVERSE LENGTH=688
Length = 688
Score = 55.1 bits (131), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 38 EEELRFWRVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVS 97
E + F ++E +K PE F + G PKGVLL GPPGT KTLLA+A+A F +S
Sbjct: 231 EAKQDFEEIVEF-LKTPEKFSALGAKIPKGVLLTGPPGTGKTLLAKAIAGEAGVPFFSLS 289
Query: 98 G 98
G
Sbjct: 290 G 290
>AT4G28000.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:13925456-13929280
FORWARD LENGTH=830
Length = 830
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Query: 46 VIEVPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRVS 97
++ +P++ P+LF+ G+ +P +G+LL+GPPGT KT++A+A+A+ +FI VS
Sbjct: 533 LVMLPLRRPDLFKG-GLLKPCRGILLFGPPGTGKTMMAKAIANEAGASFINVS 584
>AT1G64110.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801255
REVERSE LENGTH=827
Length = 827
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 46 VIEVPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRVS 97
++ +P++ P+LF + G+ +P +G+LL+GPPGT KT+LA+A+A +FI VS
Sbjct: 534 LVMLPLRRPDLF-TGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVS 585
>AT1G64110.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801255
REVERSE LENGTH=829
Length = 829
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 46 VIEVPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRVS 97
++ +P++ P+LF + G+ +P +G+LL+GPPGT KT+LA+A+A +FI VS
Sbjct: 536 LVMLPLRRPDLF-TGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVS 587
>AT1G64110.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:23796887-23801240
REVERSE LENGTH=824
Length = 824
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 46 VIEVPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRVS 97
++ +P++ P+LF + G+ +P +G+LL+GPPGT KT+LA+A+A +FI VS
Sbjct: 531 LVMLPLRRPDLF-TGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVS 582
>AT2G34560.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14560266-14562695
FORWARD LENGTH=393
Length = 393
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 47 IEVPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
+ +PIK+P F G+ P KG+LL+GPPGT KT+LA+AVA + TF +S
Sbjct: 128 VVMPIKYPTYFN--GLLTPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISA 178
>AT2G34560.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14560266-14562695
FORWARD LENGTH=384
Length = 384
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 47 IEVPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
+ +PIK+P F G+ P KG+LL+GPPGT KT+LA+AVA + TF +S
Sbjct: 119 VVMPIKYPTYFN--GLLTPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISA 169
>AT5G64580.1 | Symbols: | AAA-type ATPase family protein |
chr5:25817391-25821465 REVERSE LENGTH=855
Length = 855
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 51 IKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
+K+ E F++ GI PKGVLL+GPPGT KTLLA+A+A F +G
Sbjct: 335 LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAANG 382
>AT2G29080.1 | Symbols: ftsh3 | FTSH protease 3 |
chr2:12489911-12492999 REVERSE LENGTH=809
Length = 809
Score = 52.8 bits (125), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 51 IKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
+K+P+ +E G PKG LL GPPGT KTLLA+A A + F+ +SG
Sbjct: 341 LKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISG 388
>AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1, FRC2,
BOT1, FTR | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:30205499-30208050
REVERSE LENGTH=523
Length = 523
Score = 52.4 bits (124), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 47 IEVPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRVS 97
+ +P+ PE F+ GI +P KGVL++GPPGT KTLLA+AVA TF VS
Sbjct: 255 VVLPLWMPEYFQ--GIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVS 304
>AT4G23940.1 | Symbols: | FtsH extracellular protease family |
chr4:12437108-12441841 FORWARD LENGTH=946
Length = 946
Score = 52.4 bits (124), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 51 IKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
+K+P+LF+ GI P GVLL GPPG KTL+A+A+A F +++G
Sbjct: 449 LKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAG 496
>AT1G07510.1 | Symbols: ftsh10 | FTSH protease 10 |
chr1:2305689-2309380 FORWARD LENGTH=813
Length = 813
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 51 IKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
+++P+ +E G PKG LL GPPGT KTLLA+A A + F+ +SG
Sbjct: 346 LQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISG 393
>AT1G05910.1 | Symbols: | cell division cycle protein 48-related /
CDC48-related | chr1:1790796-1796503 FORWARD LENGTH=1210
Length = 1210
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 50 PIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVA 86
P+ +PE F S I P+GVLL GPPGT KTL+ARA+A
Sbjct: 400 PLLYPEFFASYSITPPRGVLLCGPPGTGKTLIARALA 436
>AT2G26140.1 | Symbols: ftsh4 | FTSH protease 4 |
chr2:11131939-11135126 REVERSE LENGTH=717
Length = 717
Score = 50.1 bits (118), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 29/48 (60%)
Query: 51 IKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
++ P+ F G PKGVLL GPPGT KT+LARA+A F SG
Sbjct: 246 LRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSG 293
>AT3G01610.1 | Symbols: CDC48C, emb1354 | cell division cycle 48C |
chr3:231787-235057 FORWARD LENGTH=820
Length = 820
Score = 50.1 bits (118), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 50 PIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
PI +PE F+ G+ P G+L +GPPG KT LA A+A+ F ++S
Sbjct: 252 PILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISA 300
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 41 LRFWRVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSG 98
L+F R I PIK P+++++ G+ G LLYGPPG KTL+A+A A+ F+ + G
Sbjct: 538 LQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKG 595
>AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 |
chr5:23770080-23773719 REVERSE LENGTH=806
Length = 806
Score = 49.3 bits (116), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 32 AYVISPEEELRFWRVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDC 91
A V +EEL ++E +K+P+ + G P+GVLL G PGT KTLLA+AVA +D
Sbjct: 332 AGVDEAKEELE--EIVEF-LKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGESDV 388
Query: 92 TFIRVSG 98
FI S
Sbjct: 389 PFISCSA 395
>AT3G15120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5088487-5095482
REVERSE LENGTH=1954
Length = 1954
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 46 VIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAV 85
V+ +P+ +PE F++ G+ P+G+LL+G PGT KTL+ RA+
Sbjct: 734 VVLIPLLYPEFFDNLGLTPPRGILLHGHPGTGKTLVVRAL 773
>AT5G42270.1 | Symbols: VAR1, FTSH5 | FtsH extracellular protease
family | chr5:16902659-16905102 FORWARD LENGTH=704
Length = 704
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/43 (53%), Positives = 28/43 (65%)
Query: 51 IKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTF 93
+K+P+ + + G PKG LL GPPGT KTLLARAVA F
Sbjct: 269 LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPF 311
>AT1G50250.1 | Symbols: FTSH1 | FTSH protease 1 |
chr1:18614398-18616930 REVERSE LENGTH=716
Length = 716
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/43 (53%), Positives = 28/43 (65%)
Query: 51 IKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTF 93
+K+P+ + + G PKG LL GPPGT KTLLARAVA F
Sbjct: 281 LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPF 323
>AT2G03670.1 | Symbols: CDC48B | cell division cycle 48B |
chr2:1117595-1120361 FORWARD LENGTH=603
Length = 603
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 46 VIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVS 97
+I P ++P + G+ P+G+LLYGPPGT KT L RAV D I +S
Sbjct: 37 LIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLS 88
>AT2G45500.2 | Symbols: | AAA-type ATPase family protein |
chr2:18749973-18752636 REVERSE LENGTH=487
Length = 487
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 46 VIEVPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSGKRTST 103
++ +P K +LF G+ +P +G+LL+GPPG KT+LA+AVA + TF VS ++
Sbjct: 231 MVILPAKRRDLFT--GLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTS 287
>AT2G45500.1 | Symbols: | AAA-type ATPase family protein |
chr2:18749973-18752636 REVERSE LENGTH=491
Length = 491
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 46 VIEVPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSGKRTST 103
++ +P K +LF G+ +P +G+LL+GPPG KT+LA+AVA + TF VS ++
Sbjct: 235 MVILPAKRRDLFT--GLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSASSLTS 291
>AT3G16290.1 | Symbols: EMB2083 | AAA-type ATPase family protein |
chr3:5521187-5524995 REVERSE LENGTH=876
Length = 876
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 53 HPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDCTFIRVSGKR 100
H E++ G+ P G+LL GPPG KTLLA+AVA F +S +
Sbjct: 431 HGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQ 478
>AT2G27600.1 | Symbols: SKD1, VPS4, ATSKD1 | AAA-type ATPase family
protein | chr2:11781226-11783730 FORWARD LENGTH=435
Length = 435
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 49 VPIKHPELFESPGIAQP-KGVLLYGPPGTRKTLLARAVAHHTDCTFIRVS 97
+P+K P+ F G +P + LLYGPPGT K+ LA+AVA D TF VS
Sbjct: 150 LPVKFPQFFT--GKRRPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSVS 197
>AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 |
chr3:17332999-17336613 FORWARD LENGTH=802
Length = 802
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 32 AYVISPEEELRFWRVIEVPIKHPELFESPGIAQPKGVLLYGPPGTRKTLLARAVAHHTDC 91
A V +EEL ++E +++PE + G P+GVLL G PGT KTLLA+AVA +
Sbjct: 328 AGVDEAKEELE--EIVEF-LRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEV 384
Query: 92 TFIRVSG 98
FI S
Sbjct: 385 PFISCSA 391