Miyakogusa Predicted Gene

Lj1g3v1719010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1719010.1 tr|G8A2B6|G8A2B6_MEDTR Tetratricopeptide repeat
protein OS=Medicago truncatula GN=MTR_061s1013 PE=4
,68.35,0,TPR-like,NULL; ARM repeat,Armadillo-type fold; seg,NULL;
coiled-coil,NULL; Armadillo/beta-catenin-li,CUFF.27696.1
         (655 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G43120.1 | Symbols:  | ARM-repeat/Tetratricopeptide repeat (T...   593   e-169
AT5G10200.1 | Symbols:  | ARM-repeat/Tetratricopeptide repeat (T...   540   e-153
AT3G50030.1 | Symbols:  | ARM-repeat/Tetratricopeptide repeat (T...   481   e-135

>AT5G43120.1 | Symbols:  | ARM-repeat/Tetratricopeptide repeat
           (TPR)-like protein | chr5:17312602-17314368 FORWARD
           LENGTH=588
          Length = 588

 Score =  593 bits (1529), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 296/549 (53%), Positives = 390/549 (71%), Gaps = 16/549 (2%)

Query: 35  PCRCFFCTMREPDRTLRRSRISTCFREMPQ-RENQEHVLVLSALWHLAMTHPNDPEFPSL 93
           PC CF C M E D  +R++ +    R+M   R++ E  L LS +W  AM  P +PE PSL
Sbjct: 23  PC-CFSCAMEEKDPCVRKAWLELSLRDMHMIRDDTELALTLSFIWRYAMADPENPELPSL 81

Query: 94  GIFKCMANLIHKGIHNKNWLLKDQNIYIPYYAAHIIGSYTMNKEEFAQIAVESGVIPPLL 153
           G+F+CM  L+ KG+ +  W++  QN+Y+PYYAAHIIGSYTM K +FA  AVESGVI PLL
Sbjct: 82  GVFECMTRLMKKGLEDVEWVMTGQNVYVPYYAAHIIGSYTMKKPDFATKAVESGVIAPLL 141

Query: 154 ELLSGKVSWVEQRVAVRALGHLASYNSTFKSVVEYEQKVVKLTLNLASTCLEAVYVEFFE 213
           EL+  K+SWVEQRV VRALGHLASY +TF++V  YE +VV+L + +A TC++ VY EF  
Sbjct: 142 ELMRRKMSWVEQRVVVRALGHLASYETTFEAVAAYEDEVVRLAMEIAMTCVDVVYEEFVS 201

Query: 214 VKDENRARTEYHRNLLTRGIGDLEMENRKVEEWASQLQSWSIYLLNCFASKQSSLSLNLI 273
           V+ E   R  YH +LLTRG+G LEME+RK EEWASQLQ WS++LLNCFA KQ  +S  LI
Sbjct: 202 VQ-EKEGRVRYHSDLLTRGLGGLEMEDRKAEEWASQLQCWSLHLLNCFAYKQKCIS--LI 258

Query: 274 CKIVFLEELCDMWGGLVNHTSPGGVGLIRILCYNKIGRKSISELPKVLETLGNLSRSSDD 333
           C   FL+EL  MWGGLVNHTSP G+GLIRILCY+K GR+ +S   +++ +L NLSRSSDD
Sbjct: 259 CNKTFLKELSQMWGGLVNHTSPSGIGLIRILCYSKQGRRHVSGSREMILSLCNLSRSSDD 318

Query: 334 WQYIGIDCLVRLLKDRDTRYRVIDIAISYLIDLIELRSIGDKSNVGDTITKVLLLEHGFG 393
           WQY+GIDCL+ LLKD+ TRY V+++++ YL+DL+E++++  + N+GD ITKVLL+ +   
Sbjct: 319 WQYMGIDCLLLLLKDQATRYNVLEMSLFYLVDLVEVKALNVRKNLGDRITKVLLMHYCKT 378

Query: 394 KLIKHKSLKVEKALQEVLDLKVERRNXXXXXXXXXXXXAR---VLVSLMKQQGNHMFRLG 450
           K     S K +KAL+E+   KVERR              R   V+V L+KQQ N +  +G
Sbjct: 379 KKGCAYSHKAQKALKELWRNKVERRRRERKFMSKNQDFLRETSVVVYLIKQQANQLLHVG 438

Query: 451 KVEEALLRYTEALDVCPLRFRKERMKLYSNKAQCYLLLKDADSAISDSTRALCLSNPANS 510
            +E A+  YTEA+ +CPL+ R++RM LYS + +CYLLL D D+AISD TRALCLS P NS
Sbjct: 439 DIEGAIKCYTEAIGLCPLKLRRKRMNLYSERGECYLLLGDVDAAISDCTRALCLSEPVNS 498

Query: 511 HDKSLWRRSQAYDMKGMAKESLMDCVVFLSSWMTKNTTQSKHRVKIPYHAARMICKQMDA 570
           H KSLW RS+AYD+KG+++ESLMDC++F++            R  IPY+AA+MI KQM+A
Sbjct: 499 HGKSLWTRSRAYDIKGLSRESLMDCIMFVNG--------RCFRGNIPYYAAQMISKQMEA 550

Query: 571 TWLFANTRS 579
           TWLF   R+
Sbjct: 551 TWLFEKARA 559


>AT5G10200.1 | Symbols:  | ARM-repeat/Tetratricopeptide repeat
           (TPR)-like protein | chr5:3202378-3204367 FORWARD
           LENGTH=631
          Length = 631

 Score =  540 bits (1392), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 280/560 (50%), Positives = 380/560 (67%), Gaps = 34/560 (6%)

Query: 25  EHSDDQTCRSPCRCFFCTMREPDRTLRRSRISTCFREMPQRENQEHVLVLSALWHLAMTH 84
           + +  Q C  P  CFFC M+E + + RRS I   FR++P +++   VL +S LW+ AM H
Sbjct: 2   DKASSQECPYP-GCFFCVMKEGNPSKRRSCILKFFRDLPSQDDDGQVLPISGLWNTAMAH 60

Query: 85  PNDPEFPSLGIFKCMANLIHKGIHNKNWLLKDQNIYIPYYAAHIIGSYTMNKEEFAQIAV 144
           PNDPEF  LGIF+CM+ LI KG+ N+ WL  DQNIYIPYYAAHIIGSYTMN EEFA+ AV
Sbjct: 61  PNDPEFIELGIFECMSALIWKGLKNRRWLSHDQNIYIPYYAAHIIGSYTMNMEEFAERAV 120

Query: 145 ESGVIPPLLELLSGKVSWVEQRVAVRALGHLASYNSTFKSVVEYEQKVVKLTLNLASTCL 204
           E+GVIPPL+ELL G+++WVEQRVAVRALGHLA+Y STF +V ++ + +++L + LA + L
Sbjct: 121 EAGVIPPLVELLRGRLTWVEQRVAVRALGHLATYPSTFPAVADHGE-ILELAIQLAMSSL 179

Query: 205 EAVYVEFFEVKDENRARTEYHRNLLTRGIGDLEMENRKVEEWASQLQSWSIYLLNCFASK 264
           E VY  F++  D    R  YH +LLTRG+G +EME+RK EEWASQLQ WS+ L+NCFA K
Sbjct: 180 EIVYSHFYQYPDR---RLSYHCDLLTRGMGGVEMESRKAEEWASQLQCWSLQLINCFAFK 236

Query: 265 QSSLSLNLICKIVFLEELCDMWGGLVNHTSPGGVGLIRILCYNKIGRKSISELPKVLETL 324
              L    +CK  FL  L  MWGGLVN  SP G+GL+R +C +K+GR  +S    ++E L
Sbjct: 237 PEFLP--TLCKPEFLVNLPVMWGGLVNENSPAGIGLLRTICQHKLGRGPVSACAGMIEAL 294

Query: 325 GNLSRSSDDWQYIGIDCLVRLLKDRDTRYRVIDIAISYLIDLIELRSIGDKSNVGDTITK 384
            N++RSSDDWQY+ I+CL+ LL+D +T ++VID A+  L+DL E+ ++GD   +GD+I  
Sbjct: 295 CNIARSSDDWQYMAIECLLWLLQDPNTSHKVIDKAVPTLVDLAEITNLGDHKKLGDSIVS 354

Query: 385 VLLLEHGFG----KLIKH-----KSLKVEKALQEVLDLKVERRNXXXXXXXXXXXXARVL 435
           VL      G    +LI+      + LK EK++ +  DL +++              A  L
Sbjct: 355 VLQECSSMGNRSRELIEETVNSRQRLKWEKSMPKE-DLHIKQ--------------AAAL 399

Query: 436 VSLMKQQGNHMFRLGKVEEALLRYTEALDVCPLRFRKERMKLYSNKAQCYLLLKDADSAI 495
           V  +K +GN +F  G +  A  +Y+EAL +CP+R +KER+ LYSN+AQC+LLL+    AI
Sbjct: 400 V--VKLEGNSLFSSGDIAGAAEKYSEALSLCPMRSKKERVVLYSNRAQCHLLLQQPLVAI 457

Query: 496 SDSTRALCLSNPANSHDKSLWRRSQAYDMKGMAKESLMDCVVFLSSWMTKNTTQ-SKHRV 554
           SD+TRALCL NP N H KSLWRR+QAYDM G+AKESL+D ++F++     N    S  + 
Sbjct: 458 SDATRALCLHNPVNRHAKSLWRRAQAYDMLGLAKESLLDAILFINECSQSNDPDLSMRQN 517

Query: 555 KIPYHAARMICKQMDATWLF 574
           K+P +A R++ KQM A WLF
Sbjct: 518 KVPDYAERLVKKQMRAAWLF 537


>AT3G50030.1 | Symbols:  | ARM-repeat/Tetratricopeptide repeat
           (TPR)-like protein | chr3:18546490-18548132 REVERSE
           LENGTH=501
          Length = 501

 Score =  481 bits (1237), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 257/557 (46%), Positives = 361/557 (64%), Gaps = 62/557 (11%)

Query: 28  DDQTCRSPCRCFFCTMREPDRTLRRSRISTCFREMPQRENQEHVLVLSALWHLAMTHPND 87
           D+  C +P  CFFC+M++ +   RRS+++  F+E+P+ E+++HVLVLS LW++AM+ P+D
Sbjct: 5   DEPKCTNP-SCFFCSMKDTNPFRRRSKLAAIFKEIPRTESKDHVLVLSGLWNIAMSEPDD 63

Query: 88  PEFPSLGIFKCMANLIHKGIHNKNWLLKDQNIYIPYYAAHIIGSYTMNKEEFAQIAVESG 147
           PEFPSLG+F+CM+ LIHK I N  WLLKDQNI+IPYYAAHIIGSY MNKE+ A +AV+S 
Sbjct: 64  PEFPSLGLFECMSKLIHKSIKNSVWLLKDQNIFIPYYAAHIIGSYVMNKEDLAAMAVDSK 123

Query: 148 V--IPPLLELLSGKVSWVEQRVAVRALGHLASYNSTFKSVVEYEQKVVKLTLNLASTCLE 205
           V  +P LLELL GK+SWVEQR A RALGHLAS+  +F++V  +E+++VKL + +A+ CL+
Sbjct: 124 VFLVPALLELLRGKISWVEQRAAARALGHLASHEKSFEAVSLFEEEIVKLAMEIATNCLK 183

Query: 206 AVYVEFFEVKDENRARTEYHRNLLTRGIGDLEMENRKVEEWASQLQSWSIYLLNCFASKQ 265
            VY  F  V+D  R R +Y  +LLTRG+G  E EN+K EEW  QLQ WS++LLNCFAS+ 
Sbjct: 184 NVYKSFLGVED--RGRLKYQSDLLTRGLGGFETENQKAEEWGIQLQCWSLFLLNCFASR- 240

Query: 266 SSLSLNLICKIVFLEELCDMWGGLVNHTSPGGVGLIRILCYNKIGRKSISELPKVLETLG 325
                                   VN  SPGG+GLI+ LC  ++GRK +SE+ +V+E L 
Sbjct: 241 ------------------------VNRKSPGGLGLIKSLCKTELGRKRVSEVREVIERLC 276

Query: 326 NLSRSSDDWQYIGIDCLVRLLKDRDTRYRVIDIAISYLIDLIELRSIGDKSNVGDTITKV 385
           +LSRSSDDW+   +D L+ LLKD + R     +A   L D  +++  G            
Sbjct: 277 DLSRSSDDWKETALDTLLLLLKDSNVR-----VAQIVLQDYHKIKYSG------------ 319

Query: 386 LLLEHGFGKLIKHKSLKVEKALQEVLDLKVERRNXXXXXXXXXXXXARVLVSLMKQQGNH 445
                     +K  + +  ++++ + ++KVER+              R +V  +K+QG  
Sbjct: 320 ----------LKMTTEEAHRSIENLWEIKVERKKKEKLMSETELEERRKMVKSLKKQGKK 369

Query: 446 MFRLGKVEEALLRYTEALDVCPLRFRKERMKLYSNKAQCYLLLKDADSAISDSTRALCLS 505
            F  G V+EA+  YT  +D+CPL   ++R+ L+SN+AQCYLLLK  +SAISD+TRALCLS
Sbjct: 370 KFLKGFVKEAMEIYTVGIDLCPLDMLRDRVVLFSNRAQCYLLLKKVESAISDATRALCLS 429

Query: 506 NPANSHDKSLWRRSQAYDMKGMAKESLMDCVVFLSSWMTKNTTQSKHRVKIPYHAARMIC 565
              N H KSLWRRSQA+D+KG  +ESLMDC+ F+   +  + TQ     +IPY+AA+MI 
Sbjct: 430 GVNNPHGKSLWRRSQAFDLKGSTRESLMDCLAFVDHRVKHSNTQ-----RIPYYAAQMIR 484

Query: 566 KQMDATWLFANTRSKAK 582
           KQM AT +F+   S ++
Sbjct: 485 KQMSATCIFSGVVSNSR 501