Miyakogusa Predicted Gene

Lj1g3v1698930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1698930.1 Non Chatacterized Hit- tr|B9R740|B9R740_RICCO
Mads box protein, putative OS=Ricinus communis GN=RCOM,34.24,4e-16,
,gene.g31837.t1.1
         (178 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G77950.2 | Symbols: AGL67 | AGAMOUS-like 67 | chr1:29307029-2...    52   2e-07
AT1G77950.1 | Symbols: AGL67 | AGAMOUS-like 67 | chr1:29307029-2...    52   2e-07

>AT1G77950.2 | Symbols: AGL67 | AGAMOUS-like 67 |
          chr1:29307029-29309667 FORWARD LENGTH=252
          Length = 252

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 25/32 (78%)

Query: 1  MFSPSGRACLFSGNRSIEEILERYINLPESER 32
          MFSPS R CLFSG   IE++L RYINLP+ ER
Sbjct: 47 MFSPSDRLCLFSGQTRIEDVLARYINLPDQER 78


>AT1G77950.1 | Symbols: AGL67 | AGAMOUS-like 67 |
          chr1:29307029-29309667 FORWARD LENGTH=252
          Length = 252

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/32 (68%), Positives = 25/32 (78%)

Query: 1  MFSPSGRACLFSGNRSIEEILERYINLPESER 32
          MFSPS R CLFSG   IE++L RYINLP+ ER
Sbjct: 47 MFSPSDRLCLFSGQTRIEDVLARYINLPDQER 78