Miyakogusa Predicted Gene

Lj1g3v1697850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1697850.1 Non Chatacterized Hit- tr|J3PC71|J3PC71_GAGT3
Uncharacterized protein OS=Gaeumannomyces graminis
var,33.17,5e-19,MRG,MRG domain; seg,NULL; MORTALITY FACTOR 4-LIKE
PROTEIN,MRG,CUFF.27687.1
         (222 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G02740.1 | Symbols:  | MRG family protein | chr1:599734-60202...   187   7e-48
AT4G37280.1 | Symbols:  | MRG family protein | chr4:17546748-175...   175   2e-44

>AT1G02740.1 | Symbols:  | MRG family protein | chr1:599734-602021
           REVERSE LENGTH=327
          Length = 327

 Score =  187 bits (474), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 94/199 (47%), Positives = 129/199 (64%)

Query: 15  KNAKVPRASQAKSKGFNVGRGRKRKNESLAKVKSEVDPDKVFNIQIPPTLKKQLVDDCEF 74
           K+A   + S+ K +  NV RGRKRK +S+   K+ +  D + +  IPP L+KQL+DD EF
Sbjct: 125 KSAMAWKVSKMKPRSPNVARGRKRKQDSVDTEKNVLPSDNLLSFNIPPALRKQLLDDFEF 184

Query: 75  ITNLGKLVKLPRTPSVSDIVKNYFDYKLKKCGSIPDSTEEIMKGLCFYFDNALPNMLLYK 134
           +T + KLV+LPR+P+V  I+K Y D ++KK G + DS EEI+KGL  YFD ALP MLLY 
Sbjct: 185 VTQMQKLVQLPRSPNVDGILKKYIDSQMKKHGRVTDSLEEILKGLRCYFDKALPVMLLYN 244

Query: 135 NEREQYKEACPNDILPSTIYGAEHXXXXXXXXXXXXXXXSIESQTLKELQAQLLDFLRFL 194
           NER+QY+E+    + PST+YGAEH               ++  +TLKELQ   +D LRFL
Sbjct: 245 NERKQYEESVSGGVSPSTVYGAEHLLRLFVKLPELLVHVNMAEETLKELQDNFVDILRFL 304

Query: 195 QRNQSKFFLSTYHVQEDTE 213
           ++NQS  F+STY   E+ E
Sbjct: 305 RKNQSVLFVSTYKAVEEME 323


>AT4G37280.1 | Symbols:  | MRG family protein |
           chr4:17546748-17549362 REVERSE LENGTH=320
          Length = 320

 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 94/231 (40%), Positives = 135/231 (58%), Gaps = 13/231 (5%)

Query: 4   KQALDEKHGNDKNAKVPRASQAKSKG------------FNVGRGRKRKNESLAKVKSEVD 51
           ++ALD+K G +K  K  R++Q K++              N  +G+KRK+ES    K  V 
Sbjct: 91  QKALDKKQGVEKGTKSGRSAQTKTRSSADTKADKDDTKTNAAKGKKRKHES-GNEKDNVT 149

Query: 52  PDKVFNIQIPPTLKKQLVDDCEFITNLGKLVKLPRTPSVSDIVKNYFDYKLKKCGSIPDS 111
            +K+  IQIP +LKKQL DD E+I    K+VKLPR+P+V +I+  Y ++K KK G + DS
Sbjct: 150 AEKLMKIQIPASLKKQLTDDWEYIAQKDKVVKLPRSPNVDEILSKYLEFKTKKDGMVTDS 209

Query: 112 TEEIMKGLCFYFDNALPNMLLYKNEREQYKEACPNDILPSTIYGAEHXXXXXXXXXXXXX 171
             EI+KG+  YFD ALP MLLYK ER QY+E+  +D  PST+YGAEH             
Sbjct: 210 VAEILKGIRSYFDKALPVMLLYKKERRQYQESIVDDTSPSTVYGAEHLLRLFVKLPDLFS 269

Query: 172 XXSIESQTLKELQAQLLDFLRFLQRNQSKFFLSTYHVQEDTENSTNKQGDE 222
             ++E +T   +Q  L DFL+F+Q+NQS F L + +  +   +   K  D+
Sbjct: 270 YVNMEEETWSRMQQTLSDFLKFIQKNQSTFLLPSAYDSDKVSDGKGKGKDD 320