Miyakogusa Predicted Gene

Lj1g3v1650280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1650280.1 tr|G7J6E4|G7J6E4_MEDTR THO complex subunit-like
protein OS=Medicago truncatula GN=MTR_3g101790 PE=4 ,81.41,0,FMS
INTERACTING PROTEIN,NULL; coiled-coil,NULL; FimP,THO complex, subunit
5; seg,NULL,CUFF.27667.1
         (806 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G42920.2 | Symbols: THO5, AtTHO5 | THO complex,  subunit 5 | ...   814   0.0  
AT5G42920.1 | Symbols: THO5, AtTHO5 | THO complex,  subunit 5 | ...   690   0.0  
AT1G45233.2 | Symbols: THO5, AtTHO5 | THO complex,  subunit 5 | ...   521   e-148

>AT5G42920.2 | Symbols: THO5, AtTHO5 | THO complex,  subunit 5 |
           chr5:17206310-17209522 REVERSE LENGTH=819
          Length = 819

 Score =  814 bits (2103), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/826 (53%), Positives = 575/826 (69%), Gaps = 33/826 (3%)

Query: 1   MEDGEIEEGSIPMAEEDEPAFAHSPEQSKPEE---SPYEMLLNSKAYVENIIAEILSIKK 57
           MEDGEIEEG +   E   P          P E   SP E+L  SK  VE I+A++LS+KK
Sbjct: 1   MEDGEIEEGMVTADEFPTPEVTTIETIQPPREPGKSPLELLRESKTSVEEIVAKMLSMKK 60

Query: 58  ESKPKSHLRDLVTQMFLHFIILRQANRSILLEEDRVKMETERAKAPVDFTTLQLHNLMYE 117
           +   KS +R+L+TQMFL+F+ LRQANR+IL EED+VK ETERAKAPVDFTTLQLHNLMYE
Sbjct: 61  QGNHKSEIRELLTQMFLNFVNLRQANRAILTEEDKVKAETERAKAPVDFTTLQLHNLMYE 120

Query: 118 KTHYLKAIKACKDFKSKYPDIDLVPEEEFFRDAPQDIKDSVMSKDSAHNLMLKRLNFELF 177
           K+HY+KAIKAC+DFKSKYPDIDLVPE++FFR AP+ IKD  +S DS+H LM KRLNFEL 
Sbjct: 121 KSHYVKAIKACRDFKSKYPDIDLVPEQDFFRHAPEAIKDQSLSSDSSHVLMPKRLNFELH 180

Query: 178 QRKELCKLHEKLGQQKKALLETIGNRKKFLTSLPSHLKSLKKASLPVQNQLGLMHTKKLK 237
           QRKELCK   +L QQKK+LLETI  RKKFL+SLP HLKSLKKASLPVQN LG+ HTKKLK
Sbjct: 181 QRKELCKHRARLEQQKKSLLETIAERKKFLSSLPLHLKSLKKASLPVQNHLGIQHTKKLK 240

Query: 238 QHQSAELLPPALYVIYSQLLAQKEAFTEPIDVEILGSLKDAQAFARIQAHKDTGISSGND 297
           QH  AELLPP LYV+YSQLLAQKEAF E I++E++GSLKDAQA+AR Q+ KD+G+SS  +
Sbjct: 241 QHNLAELLPPPLYVLYSQLLAQKEAFEESIELEVVGSLKDAQAYARQQSRKDSGMSSNTE 300

Query: 298 NSKLEDDVPDEEEDGXXXXXXXXXXXXXESPDQGGIFQVHPLKIIIHVHEDETFDAKHAK 357
           +S+LEDD PD+++DG             E  D+ G++QVHPLKI++H+++DE  D K  K
Sbjct: 301 SSRLEDDGPDDDDDGQRRRKRPKKLTSKEGSDKAGLYQVHPLKIVLHIYDDEIPDTKSLK 360

Query: 358 LITLRFEYLVKLNVVCVGTEGSDDGTDNDILCNLFPNDTGLELPHQSAKLFVGDAVTFNA 417
           L+ L+FEYL+KLNVVCVG EGS DG + +I CNLFP+D GLE PHQS KL +GD  TF+ 
Sbjct: 361 LVILKFEYLLKLNVVCVGAEGSQDGPEKNIFCNLFPDDAGLEPPHQSTKLILGDGQTFDE 420

Query: 418 QRASRPYKWAQHLAGIDFLPEVSPLLLND---NSEATKSEDVISGLSLYRQQNRVQTILQ 474
            R SRPYKW QHLAGID    +SP+LL     N++  KS+  +  LSLYRQQ+RVQT+L+
Sbjct: 421 NRTSRPYKWVQHLAGID----ISPVLLGQEAHNTDPAKSDTFVPDLSLYRQQHRVQTVLR 476

Query: 475 RIRSRXXXXXXXXXXXXXXXXXXWPLLSCKSVPWALHTPLCNLDGWSPVRALPVPNEASS 534
           RIR R                   P+++C+  PWALH  LC LD W  +++    +++ S
Sbjct: 477 RIRLRKKAHLALAEQLDLLMKHELPVVNCEDAPWALHKVLCALDSWLHIQS--SASKSCS 534

Query: 535 MAIIEIEKHTQEPMDVDVIERSGATKEELESLREDGELPTLLPNTSKFD----------- 583
           + +  +E+   EPM++DV  RS + KE+ ES+REDGELP+L+   +              
Sbjct: 535 LTLNSVEQ-VPEPMEIDVDGRSISGKEDFESIREDGELPSLVTAAASLTSSNHTPSKVSN 593

Query: 584 --RSKQVSLISKS--PPLNKARSQSFKKVDDNSDFLLDTESDFDEPAHIEQEHENISSDY 639
             RS+Q++L++K+   P++K +S SFKK +D+ D +LD +S+ DEP    + H     + 
Sbjct: 594 QARSRQLALMTKNLDSPISKGKSPSFKKYEDDLDLVLDDDSEIDEPTGRTEAH---VEEL 650

Query: 640 CARKS-VSWIDSGVKEFVLVLSRKTNAVERNVNLEAKIKVSMEYPLRPPLFALSLCCIPS 698
           C  K+  SW+D G +EF LV SRKT+   +   LEA +++SMEYPLRPPLF+LSL    S
Sbjct: 651 CPEKADNSWVDYGSREFALVFSRKTDG-GKLWKLEAMVQISMEYPLRPPLFSLSLHASSS 709

Query: 699 GEKHDENDGLEWYNELRAMEAEVNLHILKVLPANEQNYVLAHQVSCLAMLFDYYLDEASP 758
               +  +  + YNELRAMEAEVNLH+LK++P++++NY+L+HQ+ CLAMLFDYY+D+ SP
Sbjct: 710 SGNENGTNESDHYNELRAMEAEVNLHMLKIIPSDQENYLLSHQIRCLAMLFDYYVDDPSP 769

Query: 759 SPERTNCTSVIDVGLCKPVXXXXXXXXXXXXXXXKMISWKDMKFSS 804
             +R   T+V+DVGLCKPV               KMISWK    +S
Sbjct: 770 DSKRGTATTVVDVGLCKPVDGKLLVRSFRGRDHRKMISWKGRGCAS 815


>AT5G42920.1 | Symbols: THO5, AtTHO5 | THO complex,  subunit 5 |
           chr5:17206310-17209106 REVERSE LENGTH=702
          Length = 702

 Score =  690 bits (1780), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/709 (52%), Positives = 492/709 (69%), Gaps = 30/709 (4%)

Query: 115 MYEKTHYLKAIKACKDFKSKYPDIDLVPEEEFFRDAPQDIKDSVMSKDSAHNLMLKRLNF 174
           MYEK+HY+KAIKAC+DFKSKYPDIDLVPE++FFR AP+ IKD  +S DS+H LM KRLNF
Sbjct: 1   MYEKSHYVKAIKACRDFKSKYPDIDLVPEQDFFRHAPEAIKDQSLSSDSSHVLMPKRLNF 60

Query: 175 ELFQRKELCKLHEKLGQQKKALLETIGNRKKFLTSLPSHLKSLKKASLPVQNQLGLMHTK 234
           EL QRKELCK   +L QQKK+LLETI  RKKFL+SLP HLKSLKKASLPVQN LG+ HTK
Sbjct: 61  ELHQRKELCKHRARLEQQKKSLLETIAERKKFLSSLPLHLKSLKKASLPVQNHLGIQHTK 120

Query: 235 KLKQHQSAELLPPALYVIYSQLLAQKEAFTEPIDVEILGSLKDAQAFARIQAHKDTGISS 294
           KLKQH  AELLPP LYV+YSQLLAQKEAF E I++E++GSLKDAQA+AR Q+ KD+G+SS
Sbjct: 121 KLKQHNLAELLPPPLYVLYSQLLAQKEAFEESIELEVVGSLKDAQAYARQQSRKDSGMSS 180

Query: 295 GNDNSKLEDDVPDEEEDGXXXXXXXXXXXXXESPDQGGIFQVHPLKIIIHVHEDETFDAK 354
             ++S+LEDD PD+++DG             E  D+ G++QVHPLKI++H+++DE  D K
Sbjct: 181 NTESSRLEDDGPDDDDDGQRRRKRPKKLTSKEGSDKAGLYQVHPLKIVLHIYDDEIPDTK 240

Query: 355 HAKLITLRFEYLVKLNVVCVGTEGSDDGTDNDILCNLFPNDTGLELPHQSAKLFVGDAVT 414
             KL+ L+FEYL+KLNVVCVG EGS DG + +I CNLFP+D GLE PHQS KL +GD  T
Sbjct: 241 SLKLVILKFEYLLKLNVVCVGAEGSQDGPEKNIFCNLFPDDAGLEPPHQSTKLILGDGQT 300

Query: 415 FNAQRASRPYKWAQHLAGIDFLPEVSPLLLND---NSEATKSEDVISGLSLYRQQNRVQT 471
           F+  R SRPYKW QHLAGID    +SP+LL     N++  KS+  +  LSLYRQQ+RVQT
Sbjct: 301 FDENRTSRPYKWVQHLAGID----ISPVLLGQEAHNTDPAKSDTFVPDLSLYRQQHRVQT 356

Query: 472 ILQRIRSRXXXXXXXXXXXXXXXXXXWPLLSCKSVPWALHTPLCNLDGWSPVRALPVPNE 531
           +L+RIR R                   P+++C+  PWALH  LC LD W  +++    ++
Sbjct: 357 VLRRIRLRKKAHLALAEQLDLLMKHELPVVNCEDAPWALHKVLCALDSWLHIQS--SASK 414

Query: 532 ASSMAIIEIEKHTQEPMDVDVIERSGATKEELESLREDGELPTLLPNTSKFD-------- 583
           + S+ +  +E+   EPM++DV  RS + KE+ ES+REDGELP+L+   +           
Sbjct: 415 SCSLTLNSVEQ-VPEPMEIDVDGRSISGKEDFESIREDGELPSLVTAAASLTSSNHTPSK 473

Query: 584 -----RSKQVSLISKS--PPLNKARSQSFKKVDDNSDFLLDTESDFDEPAHIEQEHENIS 636
                RS+Q++L++K+   P++K +S SFKK +D+ D +LD +S+ DEP    + H    
Sbjct: 474 VSNQARSRQLALMTKNLDSPISKGKSPSFKKYEDDLDLVLDDDSEIDEPTGRTEAH---V 530

Query: 637 SDYCARKS-VSWIDSGVKEFVLVLSRKTNAVERNVNLEAKIKVSMEYPLRPPLFALSLCC 695
            + C  K+  SW+D G +EF LV SRKT+   +   LEA +++SMEYPLRPPLF+LSL  
Sbjct: 531 EELCPEKADNSWVDYGSREFALVFSRKTDG-GKLWKLEAMVQISMEYPLRPPLFSLSLHA 589

Query: 696 IPSGEKHDENDGLEWYNELRAMEAEVNLHILKVLPANEQNYVLAHQVSCLAMLFDYYLDE 755
             S    +  +  + YNELRAMEAEVNLH+LK++P++++NY+L+HQ+ CLAMLFDYY+D+
Sbjct: 590 SSSSGNENGTNESDHYNELRAMEAEVNLHMLKIIPSDQENYLLSHQIRCLAMLFDYYVDD 649

Query: 756 ASPSPERTNCTSVIDVGLCKPVXXXXXXXXXXXXXXXKMISWKDMKFSS 804
            SP  +R   T+V+DVGLCKPV               KMISWK    +S
Sbjct: 650 PSPDSKRGTATTVVDVGLCKPVDGKLLVRSFRGRDHRKMISWKGRGCAS 698


>AT1G45233.2 | Symbols: THO5, AtTHO5 | THO complex,  subunit 5 |
           chr1:17152956-17154662 FORWARD LENGTH=452
          Length = 452

 Score =  521 bits (1341), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 263/449 (58%), Positives = 336/449 (74%), Gaps = 18/449 (4%)

Query: 31  EESPYEMLLNSKAYVENIIAEILSIKKESKPKSHLRDLVTQMFLHFIILRQANRSILLEE 90
           E+SP E+L  +KA VE IIA++LSIK++  PKS  R+L+TQMFL+FI LRQANRSIL+EE
Sbjct: 14  EKSPLELLQQTKASVEAIIAKMLSIKQQGTPKSENRELLTQMFLNFINLRQANRSILIEE 73

Query: 91  DRVKMETERAKAPVDFTTLQLHNLMYEKTHYLKAIKACKDFKSKYPDIDLVPEEEFFRDA 150
           ++V+ ETE AK+PVDFTTL+LHNLMYEK+HYLKA KA +DFKS+YP+IDL+ E++FF DA
Sbjct: 74  EKVRTETEIAKSPVDFTTLELHNLMYEKSHYLKANKASRDFKSRYPNIDLISEQDFFSDA 133

Query: 151 PQDIKDSVMSKDSAHNLMLKRLNFELFQRKELCKLHEKLGQQKKALLETIGNRKKFLTSL 210
           P+ IK   +S DS+H+LMLKRLNFEL QRKELCKL  +L QQKK+LLE+   R KFL+SL
Sbjct: 134 PEAIKSQTLSNDSSHDLMLKRLNFELHQRKELCKLRVRLEQQKKSLLESNAERNKFLSSL 193

Query: 211 PSHLKSLKKASLPVQNQLGLMHTKKLKQHQSAELLPPALYVIYSQLLAQKEAFTEPIDVE 270
           P HLKSLKKASLPVQ+QL L + KKLK H  AELLPP LYVIYSQ +A KEAF E IDVE
Sbjct: 194 PVHLKSLKKASLPVQSQLSLQNQKKLKYHNLAELLPPPLYVIYSQFMALKEAFEENIDVE 253

Query: 271 ILGSLKDAQAFARIQAHKDTGISSGNDNSKLEDDVPDEEEDGXXXXXXXXXXXXXESPDQ 330
           + GSLKDAQ +AR QA +++      ++ +LE  V +E +                  D+
Sbjct: 254 VSGSLKDAQTYARQQAEQNS------ESLRLEVGVDEERQRKRLKKV---------GSDE 298

Query: 331 GGIFQVHPLKIIIHVHEDETFDAKHAKLITLRFEYLVKLNVVCVGTEGSDDGTDNDILCN 390
           GG++QVHPLK+++HV++DE  D K  +L+ L+FEYL+KLNVVCVG E S+DG + +ILCN
Sbjct: 299 GGVYQVHPLKVVLHVYDDEITDPKSHELVMLKFEYLLKLNVVCVGIEESEDGLEKNILCN 358

Query: 391 LFPNDTGLELPHQSAKLFVGDAVTFNAQRASRPYKWAQHLAGIDFLPEVSPLLLNDNSEA 450
           LFP+D+GLE PHQSAKL +G+   F+  R SRPYKWAQHLAGI+ LPE+SP   + + + 
Sbjct: 359 LFPDDSGLEPPHQSAKLILGNDHVFDKSRTSRPYKWAQHLAGIETLPEMSPFFTDKDIQY 418

Query: 451 TKSEDVISGLSLYRQQNRVQTILQRIRSR 479
           +   D   G +       VQT+LQRIRS+
Sbjct: 419 S---DTAKGYASASDHRNVQTVLQRIRSQ 444