Miyakogusa Predicted Gene

Lj1g3v1650120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1650120.1 Non Chatacterized Hit- tr|I1JTJ3|I1JTJ3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.15137 PE,80.13,0,FAMILY
NOT NAMED,NULL; Putative isomerase YbhE,NULL; coiled-coil,NULL;
VID27,Vacuolar import/degrada,CUFF.27635.1
         (635 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33400.1 | Symbols:  | Vacuolar import/degradation, Vid27-rel...   861   0.0  
AT3G19240.1 | Symbols:  | Vacuolar import/degradation, Vid27-rel...   799   0.0  

>AT4G33400.1 | Symbols:  | Vacuolar import/degradation,
           Vid27-related protein | chr4:16078189-16080410 REVERSE
           LENGTH=645
          Length = 645

 Score =  861 bits (2224), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/602 (69%), Positives = 479/602 (79%), Gaps = 14/602 (2%)

Query: 37  RVKTPPS-LDDVEXXXXXXXXXXXXXXXXXXXXXPNAVKLYLHIGGNTPNAKWVTSDKLT 95
           R K+P S LDDVE                      N+ +L+ +I GNTP AKWVT++KLT
Sbjct: 55  RPKSPSSSLDDVEAKLQALKLKYPLTQSAPSTQ--NSARLFRYINGNTPKAKWVTAEKLT 112

Query: 96  SYNFVKTHRIDGDSAXXXXXXXXXXXXXXXXSWWVLKVGSKVRSKVGLDMQLKTFSDQRR 155
           +Y FVKT++                       WW+LKVGSK+R KV  +MQLK + DQRR
Sbjct: 113 AYCFVKTNK------GDEDDEDDDENGDVENEWWILKVGSKIREKVSDEMQLKAYKDQRR 166

Query: 156 VDFVARGVWAMKFFTEQDYSAFVVQFQNCLFENTHGVEATEENRLKVYGKDFIGWANPEA 215
           VDFVA+ VWAMKF + +D+S FV  + NCLFEN HGVE  E N+ K+YGKDFIGWANPEA
Sbjct: 167 VDFVAKAVWAMKFASSEDFSVFVSSYNNCLFENNHGVEFNEANKAKIYGKDFIGWANPEA 226

Query: 216 ADDSMWEDAEDRFSKSPG--SATPVRPSQDLREEFEEAANGGIQSIALGALDNSFLVGEN 273
           ADDSMWEDA+D   +SPG  SATP R +QDL E FEEA + GI S+ALGALDNSFLVG++
Sbjct: 227 ADDSMWEDADDILLQSPGGGSATPARDTQDLTEAFEEATSEGIHSLALGALDNSFLVGDS 286

Query: 274 GIQVVKNFAHGIHGKGAFVNFRDGYQNESSSHCTPKKTLLMKAETNMLLMSPAGEGKLHS 333
           GIQV KN   GI GKG  VNF  GY    SS   PKK LLM+AETNMLLMSP  +   HS
Sbjct: 287 GIQVFKNMRQGIQGKGVCVNFEPGYGRTHSS--APKKALLMRAETNMLLMSPMSQTP-HS 343

Query: 334 MGLHQLDIETGKVVTEWKFGKDGTEITMRDIANDSKGAQLDPSGSTFLGLDDNRLCRWDM 393
            G+HQLDIETGK+++EWKF KDG +I+M DI ND KGAQLDPS STFLGLD+NRLCRWDM
Sbjct: 344 RGIHQLDIETGKIISEWKFEKDGVDISMSDITNDGKGAQLDPSASTFLGLDNNRLCRWDM 403

Query: 394 RDRNGMVQNIANSNTPVLNWAQGHQFSRGTSFQCFATTGDGSIVVGSLDGKIRLYSINSM 453
           RDR GMVQ++A +NTPVLNWAQGHQFSRGT+FQCFATTGDGSIVVGSLDGKIRLYS N+M
Sbjct: 404 RDRYGMVQDLATANTPVLNWAQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSSNTM 463

Query: 454 RQAKTAFPGLGSPVTHVDVTFDGKWIVGTTDSYLIVICTMFTDKDGKFKTGFAGRMGNKI 513
           RQAKTAFPGLG+PVTHVD TFDGKWIVGTTD+YLIVICT+FTDK GK KTGF GRMGNKI
Sbjct: 464 RQAKTAFPGLGAPVTHVDATFDGKWIVGTTDTYLIVICTLFTDKSGKTKTGFEGRMGNKI 523

Query: 514 AAPRLLKLNPLDSHLAGVNNKFRNAQFSWVTENGRQERHIVATVGKFSVIWNFQQVKDGS 573
           AAPRLLKL PLD+HLAG +NKFRNAQFSWVTE+G+QERH+VATVGKFSVIWNFQQVK+GS
Sbjct: 524 AAPRLLKLRPLDAHLAGSDNKFRNAQFSWVTEDGKQERHVVATVGKFSVIWNFQQVKNGS 583

Query: 574 HDCYHNQQGLKSCYCYKIVLRDDSIVESRFMHDKFAVSDSPEAPLVIATPLKVSSFSMSS 633
           H+CYH+Q+GLK CYCYKIVLR++SIV+SRFM+D FA+S SPEAPLVIATP+KVSSFS+SS
Sbjct: 584 HECYHDQEGLKKCYCYKIVLRNESIVDSRFMNDNFAISGSPEAPLVIATPMKVSSFSLSS 643

Query: 634 RR 635
           +R
Sbjct: 644 KR 645


>AT3G19240.1 | Symbols:  | Vacuolar import/degradation,
           Vid27-related protein | chr3:6664383-6666423 FORWARD
           LENGTH=648
          Length = 648

 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/569 (68%), Positives = 455/569 (79%), Gaps = 12/569 (2%)

Query: 71  NAVKLYLHIGGNTPNAKWVTSDKLTSYNFVKTHRIDGDSAXXXXXXXXXXXXXXXXSWWV 130
           NAVKLY HIGGNTP AKW+ SDK+TSY FVKT  +D                    S+W 
Sbjct: 87  NAVKLYRHIGGNTPKAKWIVSDKMTSYKFVKTSSVD--GEDIDDYDDCEESGEGGESFWF 144

Query: 131 LKVGSKVRSKVGLDMQLKTFSDQRRVDFVARGVWAMKFFTEQDYSAFVVQFQNCLFENTH 190
           L VG+KV+++V  DMQLK F DQRRVDFV+ GVWA+KF T++DY  FV +FQ+ LFEN +
Sbjct: 145 LGVGTKVKARVSTDMQLKMFGDQRRVDFVSNGVWALKFLTDEDYRKFVTRFQDYLFENVY 204

Query: 191 GVEATEENRLKVYGKDFIGWANPEAADDSMWEDAEDRFSKSPGSATPVRPSQDLREEFEE 250
            + A+EENR+KVYGKDFIGWANPEAADDSMWEDAE   +      T  + + DL EEFEE
Sbjct: 205 KIRASEENRVKVYGKDFIGWANPEAADDSMWEDAE---APPEEEETQGKRNTDLTEEFEE 261

Query: 251 AANGGIQSIALGALDNSFLVGENGIQVVKNFAHGIHGKGAFVNFRDGYQN--ESSSHCTP 308
            ANGG+QS+ LGALDNSFLV + G+QV +N   GIHGKG  V F  G       SS  TP
Sbjct: 262 VANGGVQSLTLGALDNSFLVNDYGVQVYRNMERGIHGKGVCVRFDSGNSKFGSGSSQTTP 321

Query: 309 KKTLLMKAETNMLLMSPAGEGKLHSMGLHQLDIETGKVVTEWKFGKDGTEITMRDIANDS 368
            K LLM+AETNM+LMSPA +GK +S G+ QLDIE+GK+VTEWKF KDGTEITMRDI ND+
Sbjct: 322 NKALLMRAETNMMLMSPAKQGKPNSTGVKQLDIESGKIVTEWKFEKDGTEITMRDITNDT 381

Query: 369 KGAQLDPSGSTFLGLDDNRLCRWDMRDRNGMVQNIANSNTPVLNWAQGHQFSRGTSFQCF 428
           KG+QLDPS STFLGLDDNRLC+WDMRDR G+VQNI   ++P+L W QGHQFSRGT+FQCF
Sbjct: 382 KGSQLDPSESTFLGLDDNRLCQWDMRDRRGIVQNI---DSPILEWTQGHQFSRGTNFQCF 438

Query: 429 ATTGDGSIVVGSLDGKIRLYSINSMRQAKTAFPGLGSPVTHVDVTFDGKWIVGTTDSYLI 488
           ATTGDGSIVVGSLDGKIRLYS  SMR AKTAFPGLGSP+THVDV++DGKWI+GTTD+YL+
Sbjct: 439 ATTGDGSIVVGSLDGKIRLYSKTSMRMAKTAFPGLGSPITHVDVSYDGKWILGTTDTYLV 498

Query: 489 VICTMFTDKDGKFKTGFAGRMGNKIAAPRLLKLNPLDSHLAGVNNKFRNAQFSWVTENGR 548
           +ICT+FTDK+G  KTGF+GRMGNKI APRLLKL PLDSHLAG +NKF    FSWVTE+G+
Sbjct: 499 LICTLFTDKNGLTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGKDNKFHGGHFSWVTESGK 558

Query: 549 QERHIVATVGKFSVIWNFQQVKDGSHDCYHNQQGLKSCYCYKIVLRDDSIVESRFMHDKF 608
           QERHIVATVGKFSVIW+ ++VK+ +H+CY NQQGLKSCYCYKI+L+D+SIVESRFMHD F
Sbjct: 559 QERHIVATVGKFSVIWDLERVKNSAHECYRNQQGLKSCYCYKILLKDESIVESRFMHDNF 618

Query: 609 AVS--DSPEAPLVIATPLKVSSFSMSSRR 635
           + S   SPEAPLV+ATPLKVSS S+S +R
Sbjct: 619 SFSGNKSPEAPLVVATPLKVSSISLSGKR 647