Miyakogusa Predicted Gene

Lj1g3v1649030.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1649030.1 Non Chatacterized Hit- tr|I3SCU0|I3SCU0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.56,0,B3,B3 DNA
binding domain; no description,DNA-binding pseudobarrel domain; FAMILY
NOT NAMED,NULL; DNA,NODE_67356_length_715_cov_14.486713.path1.1
         (226 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G42700.1 | Symbols:  | AP2/B3-like transcriptional factor fam...   218   3e-57
AT3G19184.1 | Symbols:  | AP2/B3-like transcriptional factor fam...   195   2e-50
AT5G58280.1 | Symbols:  | AP2/B3-like transcriptional factor fam...   124   4e-29

>AT5G42700.1 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr5:17122171-17124177 FORWARD LENGTH=211
          Length = 211

 Score =  218 bits (554), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 114/222 (51%), Positives = 137/222 (61%), Gaps = 21/222 (9%)

Query: 3   AQYEEIRRQRVEENRKRMEALNLPQLSHALRXXXXXXXXXXXXXXXRTTQKELVEVRRSS 62
            +YEE R +RVEEN+KRMEALNLP+LS  L                RT +K++V+V+R  
Sbjct: 7   TKYEEFRLKRVEENKKRMEALNLPKLSQILNSTSVKISPMKKRSIPRTPEKKMVDVKR-- 64

Query: 63  RVANMPTPVYKEVSVDTGKMPRIRRAYNKHRDYSNRVYASXXXXXXXXXXXXKLLEDLGS 122
                       V +        RR   K RD  NRVY S            K  ++LGS
Sbjct: 65  ------------VHIQ-------RRGVGKKRDLLNRVYVSEEIRDEAISRANKFQDELGS 105

Query: 123 EFPAFTKPMLQSHVSGGFWLGLPVHFCRKNLPKQDGVITLIDEDGDEYSTIYLPRKTGLS 182
            +P+F K MLQSHVSGGFWLGLPV FC+ +L   DGVITLIDE+G+EY TIYL RK GLS
Sbjct: 106 GYPSFVKSMLQSHVSGGFWLGLPVQFCKSHLGLHDGVITLIDEEGEEYETIYLARKNGLS 165

Query: 183 GGWKGFAVAHDLADGDALVFQLIKRTAFKVYIIRVNSPPEGT 224
           GGW GFAVAH+LA GD LVF+L++RTAFKVYI RV S  E +
Sbjct: 166 GGWMGFAVAHNLAYGDTLVFELVRRTAFKVYITRVGSCGESS 207


>AT3G19184.1 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr3:6637555-6639035 FORWARD LENGTH=277
          Length = 277

 Score =  195 bits (495), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 108/217 (49%), Positives = 137/217 (63%), Gaps = 6/217 (2%)

Query: 5   YEEIRRQRVEENRKRMEALNLPQLSHALRXXXXXXXXXXXXXXXRTTQK---ELVEVRRS 61
           YE+IR  RVEEN+KRM  LNL +L+ +LR                 T +   +  EVRRS
Sbjct: 8   YEQIRLNRVEENKKRMGELNLNKLAQSLRVSSSSSSSSKPSPAKPRTMRIPVDFSEVRRS 67

Query: 62  SRVANMPTPVYKEVSVDTGKMPRIRRAYNKHRDYSNRVYASXXXXXXXXXXXXKLLEDLG 121
           SR A  P P YKE  ++   + R  R  ++ RD  NRVYAS            KL   L 
Sbjct: 68  SR-AKGPPPSYKEFGLEP--LERRPRRSSRRRDLLNRVYASDDARMYAFDRAEKLQSSLD 124

Query: 122 SEFPAFTKPMLQSHVSGGFWLGLPVHFCRKNLPKQDGVITLIDEDGDEYSTIYLPRKTGL 181
           SE+ +FTKPMLQSHV+GGFWLGLP+ FC+ ++PK+D ++TL+DE+ +E    YL +K GL
Sbjct: 125 SEYASFTKPMLQSHVTGGFWLGLPLPFCKAHMPKRDVIMTLVDEEEEESQAKYLAQKNGL 184

Query: 182 SGGWKGFAVAHDLADGDALVFQLIKRTAFKVYIIRVN 218
           SGGW+GFA+ H L DGDA+VF LI RT FKVYIIRVN
Sbjct: 185 SGGWRGFAIDHQLVDGDAVVFHLIARTTFKVYIIRVN 221


>AT5G58280.1 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr5:23567338-23568670 FORWARD LENGTH=273
          Length = 273

 Score =  124 bits (312), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/238 (35%), Positives = 118/238 (49%), Gaps = 24/238 (10%)

Query: 1   MVAQYEEIRRQRVEENRKRMEA--LNLPQLSHALRXXXXXXXXXXXXXXXRTTQKELV-- 56
           M   YEE R+ R++EN KR ++  + LPQ                     +   K L+  
Sbjct: 1   MAMAYEEARKLRLQENHKRFQSNFVALPQFQ------------LLQQRNHKPIDKALLAT 48

Query: 57  -EVRRSSRVANMPTPVYKEVSVDTGKMPRIRRAYNKH-------RDYSNRVYASXXXXXX 108
            E RRSSRV  + +    +V VDTG+   +RR+ +         R      +AS      
Sbjct: 49  AEPRRSSRVRTVISSYRDDVVVDTGRTSNLRRSRHSSTWATYISRPLHECKFASYEEKVG 108

Query: 109 XXXXXXKLLEDLGSEFPAFTKPMLQSHVSGGFWLGLPVHFCRKNLPKQDGVITLIDEDGD 168
                 K    L S  P F K M++SHV   FWLGLP  FC  N P++   I L DE+G+
Sbjct: 109 AFKAAEKFQRSLKSPHPYFVKSMVRSHVYSCFWLGLPSRFCADNFPEETMEIELEDEEGE 168

Query: 169 EYSTIYLPRKTGLSGGWKGFAVAHDLADGDALVFQLIKRTAFKVYIIRVNSPPEGTTA 226
            Y  +Y+ R+ GLSGGWK FA+ H L DGDAL+F+L++   FK+Y+ + N     T+A
Sbjct: 169 VYEAVYIGRRAGLSGGWKRFALDHKLDDGDALLFELVEPKKFKIYVFKGNENANLTSA 226