Miyakogusa Predicted Gene

Lj1g3v1625460.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1625460.1 Non Chatacterized Hit- tr|I3S9I2|I3S9I2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.12,0,SUBFAMILY
NOT NAMED,NULL; SMALL SEVEN TRANSMEMBRANE DOMAIN-CONTAINING
PROTEIN,Protein of unknown fun,CUFF.27582.1
         (228 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G47640.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   417   e-117

>AT1G47640.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: mitochondrion;
           EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
           growth stages; CONTAINS InterPro DOMAIN/s: Protein of
           unknown function DUF2053, membrane (InterPro:IPR019164);
           Has 204 Blast hits to 204 proteins in 84 species: Archae
           - 0; Bacteria - 0; Metazoa - 127; Fungi - 0; Plants -
           50; Viruses - 0; Other Eukaryotes - 27 (source: NCBI
           BLink). | chr1:17518409-17519998 REVERSE LENGTH=228
          Length = 228

 Score =  417 bits (1071), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 198/228 (86%), Positives = 215/228 (94%)

Query: 1   MTVFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSIKTAVVYLATALVKLICLATFLKVS 60
           MT+FHFFNCAILTFGPHAVYYSATPLSEYDTLGTS+K AVVYLATALVKL+CLATFL+VS
Sbjct: 1   MTLFHFFNCAILTFGPHAVYYSATPLSEYDTLGTSVKAAVVYLATALVKLVCLATFLQVS 60

Query: 61  ESDSFDPYQEILKALIGFIDVAGLYFALTQLTHRNISQNHKFQAVGLGWAFADSVLHRLA 120
           E++ FDPYQE LKA+IGFIDVAGLY+AL QLTHRNISQNHKFQAVGLGWAFADSVLHRLA
Sbjct: 61  ETEVFDPYQEALKAMIGFIDVAGLYYALAQLTHRNISQNHKFQAVGLGWAFADSVLHRLA 120

Query: 121 PLWVGARGLEFTWEYILQGLEANANLVLSISLAALGSLMWLRKNKPKTLIPIIYLCAGIV 180
           PLWVGARGLEFTW+Y+LQGLEANANLV +ISLAALGSLMWLRKNKPK+LIPIIY CA I+
Sbjct: 121 PLWVGARGLEFTWDYVLQGLEANANLVFTISLAALGSLMWLRKNKPKSLIPIIYTCAVII 180

Query: 181 ATMPSITSYLRRGLGWHLPKVVGFELFTSLVMAFISWQLFAVCQRPSV 228
           ATMPSITSYL+R  GWH PK+VGFEL TSLVMAFIS QLF +CQRPS+
Sbjct: 181 ATMPSITSYLKRVNGWHFPKIVGFELATSLVMAFISCQLFILCQRPSL 228