Miyakogusa Predicted Gene

Lj1g3v1603220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1603220.1 tr|B7FSI5|B7FSI5_PHATC Lipoate-protein ligase
(Fragment) OS=Phaeodactylum tricornutum (strain CCAP
1,51.69,2e-19,lipB: lipoyl(octanoyl) transferase,Octanoyltransferase;
BPL_LplA_LipB,Biotin/lipoate A/B protein lig,CUFF.27563.1
         (165 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G47578.1 | Symbols:  | Biotin/lipoate A/B protein ligase fami...   199   7e-52
AT4G31050.1 | Symbols:  | Biotin/lipoate A/B protein ligase fami...   187   4e-48
AT1G04640.2 | Symbols: LIP2 | lipoyltransferase 2 | chr1:1292541...    71   3e-13
AT1G04640.1 | Symbols: LIP2 | lipoyltransferase 2 | chr1:1292541...    71   3e-13

>AT1G47578.1 | Symbols:  | Biotin/lipoate A/B protein ligase family
           | chr1:17484365-17485470 FORWARD LENGTH=280
          Length = 280

 Score =  199 bits (506), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 93/135 (68%), Positives = 108/135 (80%), Gaps = 1/135 (0%)

Query: 31  NAQRTRTCELLDFHHELIPYEVAWSLQKDIVREKKAQIENEGDCSDTLIILQHPSVYTLG 90
           N    R CE  D + +LIPY+ AWS QK I+ EKKA I+   +CSD+LIILQHPSVYT+G
Sbjct: 40  NHTNPRKCECFDLYDQLIPYKKAWSWQKSILNEKKALIDKNQECSDSLIILQHPSVYTMG 99

Query: 91  SGSTTQQNLKFDIENPPFHIHRTERGGEVTYHGPGQLVMYPIINLRRHKMDLHWYLRTLE 150
           +GS+ +  L FDI+N PF ++RTERGGEVTYHGPGQLVMYPIINLR HKMDLHWYLR LE
Sbjct: 100 TGSS-ENYLNFDIKNAPFDVYRTERGGEVTYHGPGQLVMYPIINLRNHKMDLHWYLRKLE 158

Query: 151 EVVIRVLSSTFSIQA 165
           EVVIRVLSS F+I A
Sbjct: 159 EVVIRVLSSAFAINA 173


>AT4G31050.1 | Symbols:  | Biotin/lipoate A/B protein ligase family
           | chr4:15114345-15115443 FORWARD LENGTH=278
          Length = 278

 Score =  187 bits (474), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 87/135 (64%), Positives = 107/135 (79%), Gaps = 1/135 (0%)

Query: 31  NAQRTRTCELLDFHHELIPYEVAWSLQKDIVREKKAQIENEGDCSDTLIILQHPSVYTLG 90
           N +  R C   D + +L+PY+ AWS QK IV EKK  I+   DC+DT+I+LQH  VYT+G
Sbjct: 38  NHEIPRKCLCFDLYDKLVPYKKAWSWQKSIVEEKKTLIDRNQDCADTVILLQHSPVYTMG 97

Query: 91  SGSTTQQNLKFDIENPPFHIHRTERGGEVTYHGPGQLVMYPIINLRRHKMDLHWYLRTLE 150
           + ST +  L FDI++ PF+++RTERGGEVTYHGPGQLVMYPIINLR H+MDLHWYLR LE
Sbjct: 98  TAST-EDYLNFDIKDAPFNVYRTERGGEVTYHGPGQLVMYPIINLRNHEMDLHWYLRMLE 156

Query: 151 EVVIRVLSSTFSIQA 165
           E+VIRVLSSTFSI+A
Sbjct: 157 EIVIRVLSSTFSIKA 171


>AT1G04640.2 | Symbols: LIP2 | lipoyltransferase 2 |
           chr1:1292541-1293248 FORWARD LENGTH=235
          Length = 235

 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 8/120 (6%)

Query: 48  IPYEVAWSLQKDIVREKKAQIENEGDCSDTLIILQHPSVYTLGSGSTTQQNL--KFDIEN 105
           + Y  +  LQ+ +V E+KA         DTL+ LQHP  YTLG   T    L  + ++  
Sbjct: 15  VNYLKSLKLQEKLVSERKAH-----QIPDTLLSLQHPPTYTLGKRRTDHNLLIPESELTK 69

Query: 106 PPFHIHRTERGGEVTYHGPGQLVMYPIINLRRHKMDLHWYLRTLEEVVIRVLSSTFSIQA 165
               +H T+RGG++T+HGP Q ++YPII+LR        Y+ TLE  +I   +S + ++A
Sbjct: 70  IGAELHYTQRGGDITFHGPHQAILYPIISLRSIGFGARNYVETLERSMIE-FASIYGVKA 128


>AT1G04640.1 | Symbols: LIP2 | lipoyltransferase 2 |
           chr1:1292541-1293248 FORWARD LENGTH=235
          Length = 235

 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 8/120 (6%)

Query: 48  IPYEVAWSLQKDIVREKKAQIENEGDCSDTLIILQHPSVYTLGSGSTTQQNL--KFDIEN 105
           + Y  +  LQ+ +V E+KA         DTL+ LQHP  YTLG   T    L  + ++  
Sbjct: 15  VNYLKSLKLQEKLVSERKAH-----QIPDTLLSLQHPPTYTLGKRRTDHNLLIPESELTK 69

Query: 106 PPFHIHRTERGGEVTYHGPGQLVMYPIINLRRHKMDLHWYLRTLEEVVIRVLSSTFSIQA 165
               +H T+RGG++T+HGP Q ++YPII+LR        Y+ TLE  +I   +S + ++A
Sbjct: 70  IGAELHYTQRGGDITFHGPHQAILYPIISLRSIGFGARNYVETLERSMIE-FASIYGVKA 128