Miyakogusa Predicted Gene

Lj1g3v1603210.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1603210.1 Non Chatacterized Hit- tr|I1M8H4|I1M8H4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,97.73,5e-18,SUBFAMILY
NOT NAMED,NULL; SEC3/SYNTAXIN-RELATED,NULL; Sec3,Exocyst complex,
component Exoc1,CUFF.27562.1
         (258 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G47550.1 | Symbols: SEC3A | exocyst complex component sec3A |...   452   e-127
AT1G47550.2 | Symbols: SEC3A | exocyst complex component sec3A |...   447   e-126
AT1G47560.1 | Symbols: SEC3B | exocyst complex component sec3B |...   429   e-120

>AT1G47550.1 | Symbols: SEC3A | exocyst complex component sec3A |
           chr1:17457171-17463896 FORWARD LENGTH=887
          Length = 887

 Score =  452 bits (1162), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 219/267 (82%), Positives = 229/267 (85%), Gaps = 11/267 (4%)

Query: 1   MLTIFIPLLVDESSFCAHFMCFEVPTLDANKSGYKDDANDDD----------LGIEDIDE 50
           MLTIFIPLLVDESSF AHFMCFEVP L A   G  +D               LGI DIDE
Sbjct: 511 MLTIFIPLLVDESSFFAHFMCFEVPAL-APPGGAGNDKKSQSNNDDGNDDDDLGIMDIDE 569

Query: 51  NDSKSGKNSAELAALNESLQDLLDGIQEDFYAVVDWAFNLDPLCCISMHGTTERYLSGQK 110
            D K GKNS +L ALNESLQDLLDGIQEDFYAVVDWA+ +DPL CISMHG TERYLSGQK
Sbjct: 570 TDKKPGKNSPDLTALNESLQDLLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQK 629

Query: 111 NDAAGFVRLLLGDLESRISMQFSRYVDEACHQIERSERNVRQTGVLPYIPRFATLATRME 170
            DAAGFVRLLLGDLESR+SMQFSR+VDEACHQIER+ERNVRQ GVLPYIPRFA LATRME
Sbjct: 630 ADAAGFVRLLLGDLESRVSMQFSRFVDEACHQIERNERNVRQMGVLPYIPRFAALATRME 689

Query: 171 QYITGQSRDLVDQAYTKFVSIMFVTLEKLSQTDPKYADIFLIENYAAFQNSLYDLANVVP 230
           QYI GQSRDLVDQAYTKFVSIMFVTLEK++Q DPKYADI L+ENYAAFQNSLYDLANVVP
Sbjct: 690 QYIQGQSRDLVDQAYTKFVSIMFVTLEKIAQQDPKYADILLLENYAAFQNSLYDLANVVP 749

Query: 231 TLAKFYHQASEAYEQACTRHISMIIYY 257
           TLAKFYHQASEAYEQACTRHISMIIYY
Sbjct: 750 TLAKFYHQASEAYEQACTRHISMIIYY 776


>AT1G47550.2 | Symbols: SEC3A | exocyst complex component sec3A |
           chr1:17457171-17463896 FORWARD LENGTH=888
          Length = 888

 Score =  447 bits (1150), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 219/268 (81%), Positives = 229/268 (85%), Gaps = 12/268 (4%)

Query: 1   MLTIFIPLLVDESSFCAHFMCFEVPTLDANKSGYKDDANDDD----------LGIEDIDE 50
           MLTIFIPLLVDESSF AHFMCFEVP L A   G  +D               LGI DIDE
Sbjct: 511 MLTIFIPLLVDESSFFAHFMCFEVPAL-APPGGAGNDKKSQSNNDDGNDDDDLGIMDIDE 569

Query: 51  NDSKSGKNSAELAALNESLQDLLDGIQEDFYAVVDWAFNLDPLCCISMHGTTERYLSGQK 110
            D K GKNS +L ALNESLQDLLDGIQEDFYAVVDWA+ +DPL CISMHG TERYLSGQK
Sbjct: 570 TDKKPGKNSPDLTALNESLQDLLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQK 629

Query: 111 NDAAGFVRLLLGDLESRISMQFSR-YVDEACHQIERSERNVRQTGVLPYIPRFATLATRM 169
            DAAGFVRLLLGDLESR+SMQFSR +VDEACHQIER+ERNVRQ GVLPYIPRFA LATRM
Sbjct: 630 ADAAGFVRLLLGDLESRVSMQFSRVFVDEACHQIERNERNVRQMGVLPYIPRFAALATRM 689

Query: 170 EQYITGQSRDLVDQAYTKFVSIMFVTLEKLSQTDPKYADIFLIENYAAFQNSLYDLANVV 229
           EQYI GQSRDLVDQAYTKFVSIMFVTLEK++Q DPKYADI L+ENYAAFQNSLYDLANVV
Sbjct: 690 EQYIQGQSRDLVDQAYTKFVSIMFVTLEKIAQQDPKYADILLLENYAAFQNSLYDLANVV 749

Query: 230 PTLAKFYHQASEAYEQACTRHISMIIYY 257
           PTLAKFYHQASEAYEQACTRHISMIIYY
Sbjct: 750 PTLAKFYHQASEAYEQACTRHISMIIYY 777


>AT1G47560.1 | Symbols: SEC3B | exocyst complex component sec3B |
           chr1:17466751-17473190 FORWARD LENGTH=887
          Length = 887

 Score =  429 bits (1102), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/267 (78%), Positives = 223/267 (83%), Gaps = 11/267 (4%)

Query: 1   MLTIFIPLLVDESSFCAHFMCFEVPTLDANKSGYKDDANDDD----------LGIEDIDE 50
           MLTIFIPLLVDESSF AHFMCFEVP L A   G  +D               LGI DIDE
Sbjct: 511 MLTIFIPLLVDESSFFAHFMCFEVPAL-APPGGAGNDKKSQSNNDDGNDNDDLGIMDIDE 569

Query: 51  NDSKSGKNSAELAALNESLQDLLDGIQEDFYAVVDWAFNLDPLCCISMHGTTERYLSGQK 110
            D K GKNS +L ALNESLQDLLDGIQEDFYAVVDWA+ +DPL  ISMHG TERYLSGQK
Sbjct: 570 ADKKPGKNSPDLTALNESLQDLLDGIQEDFYAVVDWAYKIDPLRSISMHGITERYLSGQK 629

Query: 111 NDAAGFVRLLLGDLESRISMQFSRYVDEACHQIERSERNVRQTGVLPYIPRFATLATRME 170
            DAAGFVRLLLGDLESRISMQFS +VDEACHQIE++ERNVRQ GVLPYIPRFA LATRME
Sbjct: 630 ADAAGFVRLLLGDLESRISMQFSHFVDEACHQIEKNERNVRQMGVLPYIPRFAALATRME 689

Query: 171 QYITGQSRDLVDQAYTKFVSIMFVTLEKLSQTDPKYADIFLIENYAAFQNSLYDLANVVP 230
           QYI GQSR+LVDQAYTKFVSI+FVTLEK++Q DPKYADI L+ENYAAFQ  L+DLANVVP
Sbjct: 690 QYIQGQSRNLVDQAYTKFVSILFVTLEKIAQQDPKYADILLLENYAAFQTCLFDLANVVP 749

Query: 231 TLAKFYHQASEAYEQACTRHISMIIYY 257
           TLAKFY QA EAYEQACTRHISMIIYY
Sbjct: 750 TLAKFYDQAMEAYEQACTRHISMIIYY 776