Miyakogusa Predicted Gene

Lj1g3v1572510.4
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1572510.4 Non Chatacterized Hit- tr|H9IYR4|H9IYR4_BOMMO
Uncharacterized protein OS=Bombyx mori PE=4 SV=1,58.11,1e-18,no
description,Divalent ion tolerance protein, CutA; DIVALENT CATION
TOLERANCE CUTA-RELATED,Divalent,CUFF.28024.4
         (175 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G33740.2 | Symbols: CUTA | Nitrogen regulatory PII-like, alph...   192   1e-49
AT2G33740.1 | Symbols: CUTA | Nitrogen regulatory PII-like, alph...   156   8e-39

>AT2G33740.2 | Symbols: CUTA | Nitrogen regulatory PII-like,
           alpha/beta | chr2:14269590-14271523 FORWARD LENGTH=182
          Length = 182

 Score =  192 bits (487), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 105/163 (64%), Positives = 123/163 (75%), Gaps = 14/163 (8%)

Query: 25  RRRLPLVGAFCMLTLGLSNFYR---PLYSSA---------LKTGSSLAKRSYSIRMEGNT 72
           RR  P+VGAFC+L+    +      P  S           L++  S    S SIRME ++
Sbjct: 16  RRSFPIVGAFCVLSTLSISSLSSSSPFKSGCAQSFSVVPLLRSKFSSKAFSSSIRMEESS 75

Query: 73  NNTTVPSIVVYVTVPNKEAGKKLAESIVKEKLAACVNRVPGIESVYQWQGEIQTDSEELL 132
              TVPSIVVYVTVPN+EAGKKLA SIV+EKLAACVN VPGIESVY+W+G++Q+DSEELL
Sbjct: 76  K--TVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVPGIESVYEWEGKVQSDSEELL 133

Query: 133 IIKTRQSLLEPLTEHVKANHEYDVPEVISLPITGGNLKYLEWI 175
           IIKTRQSLLEPLTEHV ANHEYDVPEVI+LPITGG+ KYLEW+
Sbjct: 134 IIKTRQSLLEPLTEHVNANHEYDVPEVIALPITGGSDKYLEWL 176


>AT2G33740.1 | Symbols: CUTA | Nitrogen regulatory PII-like,
           alpha/beta | chr2:14269590-14271326 FORWARD LENGTH=156
          Length = 156

 Score =  156 bits (394), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 88/143 (61%), Positives = 104/143 (72%), Gaps = 14/143 (9%)

Query: 25  RRRLPLVGAFCMLTLGLSNFYR---PLYSSA---------LKTGSSLAKRSYSIRMEGNT 72
           RR  P+VGAFC+L+    +      P  S           L++  S    S SIRME ++
Sbjct: 16  RRSFPIVGAFCVLSTLSISSLSSSSPFKSGCAQSFSVVPLLRSKFSSKAFSSSIRMEESS 75

Query: 73  NNTTVPSIVVYVTVPNKEAGKKLAESIVKEKLAACVNRVPGIESVYQWQGEIQTDSEELL 132
              TVPSIVVYVTVPN+EAGKKLA SIV+EKLAACVN VPGIESVY+W+G++Q+DSEELL
Sbjct: 76  K--TVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVPGIESVYEWEGKVQSDSEELL 133

Query: 133 IIKTRQSLLEPLTEHVKANHEYD 155
           IIKTRQSLLEPLTEHV ANHEY+
Sbjct: 134 IIKTRQSLLEPLTEHVNANHEYE 156