Miyakogusa Predicted Gene
- Lj1g3v1562490.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1562490.1 Non Chatacterized Hit- tr|B9F8U0|B9F8U0_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,34.11,0.000000001,seg,NULL; Cyclin-like,Cyclin-like;
Cyclin_N,Cyclin, N-terminal; Cyclin_C,Cyclin, C-terminal;
CYCLINS,CUFF.27531.1
(347 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G22490.1 | Symbols: CYCD2;1, ATCYCD2;1 | Cyclin D2;1 | chr2:9... 236 2e-62
AT2G22490.2 | Symbols: CYCD2;1 | Cyclin D2;1 | chr2:9554157-9555... 235 3e-62
AT5G65420.1 | Symbols: CYCD4;1 | CYCLIN D4;1 | chr5:26141592-261... 230 1e-60
AT5G65420.3 | Symbols: CYCD4;1 | CYCLIN D4;1 | chr5:26141592-261... 228 6e-60
AT5G10440.1 | Symbols: CYCD4;2 | cyclin d4;2 | chr5:3280611-3282... 211 4e-55
AT1G70210.1 | Symbols: CYCD1;1, ATCYCD1;1 | CYCLIN D1;1 | chr1:2... 189 3e-48
AT5G65420.2 | Symbols: CYCD4;1 | CYCLIN D4;1 | chr5:26142110-261... 177 7e-45
AT3G50070.1 | Symbols: CYCD3;3 | CYCLIN D3;3 | chr3:18565322-185... 167 1e-41
AT4G34160.1 | Symbols: CYCD3;1, CYCD3 | CYCLIN D3;1 | chr4:16357... 163 1e-40
AT5G67260.1 | Symbols: CYCD3;2 | CYCLIN D3;2 | chr5:26836313-268... 162 4e-40
AT4G03270.1 | Symbols: CYCD6;1 | Cyclin D6;1 | chr4:1432375-1433... 112 5e-25
AT4G37630.2 | Symbols: CYCD5;1 | cyclin d5;1 | chr4:17679497-176... 109 3e-24
AT4G37630.1 | Symbols: CYCD5;1 | cyclin d5;1 | chr4:17679497-176... 106 2e-23
AT5G02110.1 | Symbols: CYCD7;1, CYCD7 | CYCLIN D7;1 | chr5:41708... 79 4e-15
AT1G20610.1 | Symbols: CYCB2;3 | Cyclin B2;3 | chr1:7135073-7137... 68 9e-12
AT1G44110.1 | Symbols: CYCA1;1 | Cyclin A1;1 | chr1:16775035-167... 64 1e-10
AT4G37490.1 | Symbols: CYC1, CYCB1;1, CYCB1 | CYCLIN B1;1 | chr4... 62 4e-10
AT3G11520.1 | Symbols: CYCB1;3, CYC2 | CYCLIN B1;3 | chr3:362547... 62 8e-10
AT1G77390.1 | Symbols: TAM, CYCA1;2, DYP, CYCA1 | CYCLIN A1;2 | ... 61 1e-09
AT1G76310.1 | Symbols: CYCB2;4 | CYCLIN B2;4 | chr1:28628046-286... 61 1e-09
AT5G11300.1 | Symbols: CYC3B, CYC2BAT, CYCA2;2 | mitotic-like cy... 61 1e-09
AT5G06150.1 | Symbols: CYC1BAT, CYCB1;2 | Cyclin family protein ... 57 1e-08
AT5G25380.1 | Symbols: CYCA2;1 | cyclin a2;1 | chr5:8815230-8817... 57 2e-08
AT1G16330.1 | Symbols: CYCB3;1 | cyclin b3;1 | chr1:5582387-5587... 54 1e-07
AT2G26760.1 | Symbols: CYCB1;4 | Cyclin B1;4 | chr2:11401551-114... 54 1e-07
AT5G43080.1 | Symbols: CYCA3;1 | Cyclin A3;1 | chr5:17293227-172... 53 4e-07
AT1G47210.2 | Symbols: CYCA3;2 | cyclin-dependent protein kinase... 51 1e-06
AT1G47230.1 | Symbols: CYCA3;4 | CYCLIN A3;4 | chr1:17306752-173... 50 3e-06
>AT2G22490.1 | Symbols: CYCD2;1, ATCYCD2;1 | Cyclin D2;1 |
chr2:9554157-9555873 REVERSE LENGTH=361
Length = 361
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 189/302 (62%), Gaps = 25/302 (8%)
Query: 48 YHHQ---RSQGFGDPDELPLLS-------DECLAVMVEKECQFWPGADYLNKFRTRDLDF 97
Y+HQ + FG +P++ ++ + M+ +E +F PG DY+ + + DLD
Sbjct: 35 YNHQLFAKDDNFGGNGSIPMMGSSSSSLSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDL 94
Query: 98 GARKEAIDWIQKVRMHFGFGPLCAYLSINFFDRFLAVYEFPKGRAWTMQLLAVACLSLAA 157
R +A+DWI KV H+ FG LC LS+N+ DRFL YE PK + W QLLAV+CLSLA+
Sbjct: 95 SVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLAS 154
Query: 158 KIEETDVPLPLDLQVAESKFLFEAKTIQRMELLVLSTLKWKMQAITPFSFIDYYLRRVDD 217
K+EETDVP +DLQV + KF+FEAKTI+RMELLV++TL W++QA+TPFSFIDY++ ++
Sbjct: 155 KMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI-- 212
Query: 218 DGXXXXXXXXXXXXXXXXXXRGLDFLAFKPSE--IAAAVAMYVVGETQSVDTDKTISILI 275
G + ++FL F+PSE AAAV++ + GET+ +D +K +S LI
Sbjct: 213 SGHVSENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGETECIDEEKALSSLI 272
Query: 276 QHVEKERLMKCVEMIHELS----------SNKDSSASAPCVPQSPIGVLEAGCFSYKSDV 325
+V++ER+ +C+ ++ L+ S + + + VP SP+GVLEA C SY+S+
Sbjct: 273 -YVKQERVKRCLNLMRSLTGEENVRGTSLSQEQARVAVRAVPASPVGVLEATCLSYRSEE 331
Query: 326 DT 327
T
Sbjct: 332 RT 333
>AT2G22490.2 | Symbols: CYCD2;1 | Cyclin D2;1 | chr2:9554157-9555873
REVERSE LENGTH=362
Length = 362
Score = 235 bits (600), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 126/302 (41%), Positives = 187/302 (61%), Gaps = 24/302 (7%)
Query: 48 YHHQ---RSQGFGDPDELPLLS-------DECLAVMVEKECQFWPGADYLNKFRTRDLDF 97
Y+HQ + FG +P++ ++ + M+ +E +F PG DY+ + + DLD
Sbjct: 35 YNHQLFAKDDNFGGNGSIPMMGSSSSSLSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDL 94
Query: 98 GARKEAIDWIQKVRMHFGFGPLCAYLSINFFDRFLAVYEFPKGRAWTMQLLAVACLSLAA 157
R +A+DWI KV H+ FG LC LS+N+ DRFL YE PK + W QLLAV+CLSLA+
Sbjct: 95 SVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLAS 154
Query: 158 KIEETDVPLPLDLQVAESKFLFEAKTIQRMELLVLSTLKWKMQAITPFSFIDYYLRRVDD 217
K+EETDVP +DLQV + KF+FEAKTI+RMELLV++TL W++QA+TPFSFIDY++ ++
Sbjct: 155 KMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI-- 212
Query: 218 DGXXXXXXXXXXXXXXXXXXRGLDFLAFKPSE--IAAAVAMYVVGETQSVDTDKTISILI 275
G + ++FL F+PSE AAAV++ + GET+ +D +K +S LI
Sbjct: 213 SGHVSENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGETECIDEEKALSSLI 272
Query: 276 QHVEKERLMKCVEMIHELS----------SNKDSSASAPCVPQSPIGVLEAGCFSYKSDV 325
++ER+ +C+ ++ L+ S + + + VP SP+GVLEA C SY+S+
Sbjct: 273 YVKQQERVKRCLNLMRSLTGEENVRGTSLSQEQARVAVRAVPASPVGVLEATCLSYRSEE 332
Query: 326 DT 327
T
Sbjct: 333 RT 334
>AT5G65420.1 | Symbols: CYCD4;1 | CYCLIN D4;1 |
chr5:26141592-26143750 REVERSE LENGTH=308
Length = 308
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/263 (47%), Positives = 172/263 (65%), Gaps = 13/263 (4%)
Query: 66 SDECLAVMVEKECQFWPGADYLNKFRTRDLDFG-ARKEAIDWIQKVRMHFGFGPLCAYLS 124
S+E + MVEKE Q P DY+ + R+ DLD R++A++WI K FGPLC L+
Sbjct: 43 SEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLA 102
Query: 125 INFFDRFLAVYEFPKGRAWTMQLLAVACLSLAAKIEETDVPLPLDLQVAESKFLFEAKTI 184
+N+ DRFL+V++ P G+ W +QLLAVACLSLAAKIEET+VP+ +DLQV + +F+FEAK++
Sbjct: 103 MNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSV 162
Query: 185 QRMELLVLSTLKWKMQAITPFSFIDYYLRRVDD-DGXXXXXXXXXXXXXXXXXXRGLDFL 243
QRMELLVL+ LKW+++AITP S+I Y+LR++ D +G+DFL
Sbjct: 163 QRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFL 222
Query: 244 AFKPSEIAAAVAMYVVGETQSVDTDK-TISILIQHVEKERLMKCVEMIHELSSNKDSSAS 302
F+PSE+AAAVA+ V GE Q V D + S L ++KER+ K EMI +S S
Sbjct: 223 EFRPSEVAAAVALSVSGELQRVHFDNSSFSPLFSLLQKERVKKIGEMI-------ESDGS 275
Query: 303 APCVPQSPIGVLE--AGCFSYKS 323
C Q+P GVLE A CFS+K+
Sbjct: 276 DLC-SQTPNGVLEVSACCFSFKT 297
>AT5G65420.3 | Symbols: CYCD4;1 | CYCLIN D4;1 |
chr5:26141592-26143750 REVERSE LENGTH=318
Length = 318
Score = 228 bits (580), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 128/274 (46%), Positives = 176/274 (64%), Gaps = 25/274 (9%)
Query: 66 SDECLAVMVEKECQFWPGADYLNKFRTRDLDFG-ARKEAIDWIQKVR-----------MH 113
S+E + MVEKE Q P DY+ + R+ DLD R++A++WI K+R +H
Sbjct: 43 SEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKIRGLCRTDREACEVH 102
Query: 114 FGFGPLCAYLSINFFDRFLAVYEFPKGRAWTMQLLAVACLSLAAKIEETDVPLPLDLQVA 173
FGPLC L++N+ DRFL+V++ P G+ W +QLLAVACLSLAAKIEET+VP+ +DLQV
Sbjct: 103 -QFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVG 161
Query: 174 ESKFLFEAKTIQRMELLVLSTLKWKMQAITPFSFIDYYLRRVDD-DGXXXXXXXXXXXXX 232
+ +F+FEAK++QRMELLVL+ LKW+++AITP S+I Y+LR++ D
Sbjct: 162 DPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQV 221
Query: 233 XXXXXRGLDFLAFKPSEIAAAVAMYVVGETQSVDTDK-TISILIQHVEKERLMKCVEMIH 291
+G+DFL F+PSE+AAAVA+ V GE Q V D + S L ++KER+ K EMI
Sbjct: 222 IASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSSFSPLFSLLQKERVKKIGEMI- 280
Query: 292 ELSSNKDSSASAPCVPQSPIGVLE--AGCFSYKS 323
+S S C Q+P GVLE A CFS+K+
Sbjct: 281 ------ESDGSDLC-SQTPNGVLEVSACCFSFKT 307
>AT5G10440.1 | Symbols: CYCD4;2 | cyclin d4;2 | chr5:3280611-3282342
REVERSE LENGTH=298
Length = 298
Score = 211 bits (538), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/262 (44%), Positives = 163/262 (62%), Gaps = 11/262 (4%)
Query: 62 LPLLSDECLAVMVEKECQFWPGADYLNKFRTRDLDFGARKEAIDWIQKVRMHFGFGPLCA 121
PL S+E + M+EKE Q P DYL + R DLDF R +A+ WI K FGPLC
Sbjct: 31 FPLESEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLCI 90
Query: 122 YLSINFFDRFLAVYEFPKGRAWTMQLLAVACLSLAAKIEETDVPLPLDLQVAESKFLFEA 181
L++N+ DRFL+V++ P G+AWT+QLLAVACLSLAAKIEET+VP + LQV F+FEA
Sbjct: 91 CLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEA 150
Query: 182 KTIQRMELLVLSTLKWKMQAITPFSFIDYYLRRVDD-DGXXXXXXXXXXXXXXXXXXRGL 240
K++QRMELLVL+ L+W+++A+TP S++ Y+L +++ D +G+
Sbjct: 151 KSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKGI 210
Query: 241 DFLAFKPSEIAAAVAMYVVGETQSVDTDK-TISILIQHVEKERLMKCVEMIHELSSNKDS 299
DFL F+ SEIAAAVA+ V GE DK + S +EKER+ K EMI +D
Sbjct: 211 DFLEFRASEIAAAVALSVSGE----HFDKFSFSSSFSSLEKERVKKIGEMIE-----RDG 261
Query: 300 SASAPCVPQSPIGVLEAGCFSY 321
S+S+ P + + ++ +S+
Sbjct: 262 SSSSSQTPNNTVLQFKSRRYSH 283
>AT1G70210.1 | Symbols: CYCD1;1, ATCYCD1;1 | CYCLIN D1;1 |
chr1:26440015-26441980 FORWARD LENGTH=339
Length = 339
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 139/231 (60%), Gaps = 4/231 (1%)
Query: 68 ECLAVMVEKECQFWPGADYLNKFRTRDLDFGARKEAIDWIQKVRMHFGFGPLCAYLSINF 127
+ +A +E E F PG DYL++F+TR LD AR++++ WI KV+ ++ F PL AYL++N+
Sbjct: 50 DSIACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNY 109
Query: 128 FDRFLAVYEFPKGRAWTMQLLAVACLSLAAKIEETDVPLPLDLQVAESKFLFEAKTIQRM 187
DRFL P+ W MQLLAVACLSLAAK+EE VP D QVA K+LFEAKTI+RM
Sbjct: 110 MDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRM 169
Query: 188 ELLVLSTLKWKMQAITPFSFIDYYLRRVDDDGXXXXXXXXXXXXXXXXXXRGLDFLAFKP 247
ELLVLS L W+++++TPF FI ++ ++D G + FL + P
Sbjct: 170 ELLVLSVLDWRLRSVTPFDFISFFAYKIDPSGTFLGFFISHATEIILSNIKEASFLEYWP 229
Query: 248 SEIAAAVAMYVVGETQS----VDTDKTISILIQHVEKERLMKCVEMIHELS 294
S IAAA + V E S V+ ++ + KE++++C ++ ++
Sbjct: 230 SSIAAAAILCVANELPSLSSVVNPHESPETWCDGLSKEKIVRCYRLMKAMA 280
>AT5G65420.2 | Symbols: CYCD4;1 | CYCLIN D4;1 |
chr5:26142110-26143750 REVERSE LENGTH=242
Length = 242
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 116/151 (76%), Gaps = 1/151 (0%)
Query: 66 SDECLAVMVEKECQFWPGADYLNKFRTRDLDFG-ARKEAIDWIQKVRMHFGFGPLCAYLS 124
S+E + MVEKE Q P DY+ + R+ DLD R++A++WI K FGPLC L+
Sbjct: 43 SEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLA 102
Query: 125 INFFDRFLAVYEFPKGRAWTMQLLAVACLSLAAKIEETDVPLPLDLQVAESKFLFEAKTI 184
+N+ DRFL+V++ P G+ W +QLLAVACLSLAAKIEET+VP+ +DLQV + +F+FEAK++
Sbjct: 103 MNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSV 162
Query: 185 QRMELLVLSTLKWKMQAITPFSFIDYYLRRV 215
QRMELLVL+ LKW+++AITP S+I Y+LR++
Sbjct: 163 QRMELLVLNKLKWRLRAITPCSYIRYFLRKM 193
>AT3G50070.1 | Symbols: CYCD3;3 | CYCLIN D3;3 |
chr3:18565322-18566669 REVERSE LENGTH=361
Length = 361
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/216 (41%), Positives = 127/216 (58%), Gaps = 2/216 (0%)
Query: 100 RKEAIDWIQKVRMHFGFGPLCAYLSINFFDRFLAVYEFPKGRAWTMQLLAVACLSLAAKI 159
R++A+DWI KV+ H+GF L A L++N+FDRF+ +F + W QL A+ACLSLAAK+
Sbjct: 86 REKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKV 145
Query: 160 EETDVPLPLDLQVAESKFLFEAKTIQRMELLVLSTLKWKMQAITPFSFIDYYLRRVDDDG 219
EE VP LD QV E++++FEAKTIQRMELLVLSTL W+M +TP SF D+ +RR
Sbjct: 146 EEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTLDWRMHPVTPISFFDHIIRRYSFKS 205
Query: 220 XXXXXXXXXXXXXXXXXXRGLDFLAFKPSEIAAAVAMYVVGETQSVDTDKTISILIQ--H 277
FL+F PS +A A+ + V+ + + D S L+
Sbjct: 206 HHQLEFLSRCESLLLSIIPDSRFLSFSPSVLATAIMVSVIRDLKMCDEAVYQSQLMTLLK 265
Query: 278 VEKERLMKCVEMIHELSSNKDSSASAPCVPQSPIGV 313
V+ E++ KC E++ + S +K + P SPIGV
Sbjct: 266 VDSEKVNKCYELVLDHSPSKKRMMNWMQQPASPIGV 301
>AT4G34160.1 | Symbols: CYCD3;1, CYCD3 | CYCLIN D3;1 |
chr4:16357903-16359304 FORWARD LENGTH=376
Length = 376
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 123/200 (61%), Gaps = 2/200 (1%)
Query: 100 RKEAIDWIQKVRMHFGFGPLCAYLSINFFDRFLAVYEFPKGRAWTMQLLAVACLSLAAKI 159
RKEA+ WI +V H+GF L A L+I + D+F+ Y + + W +QL++VACLSLAAK+
Sbjct: 87 RKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAKV 146
Query: 160 EETDVPLPLDLQVAESKFLFEAKTIQRMELLVLSTLKWKMQAITPFSFIDYYLRRVDDDG 219
EET VPL LD QV E+K++FEAKTIQRMELL+LSTL+WKM ITP SF+D+ +RR+
Sbjct: 147 EETQVPLLLDFQVEETKYVFEAKTIQRMELLILSTLEWKMHLITPISFVDHIIRRLGLKN 206
Query: 220 XXXXXXXXXXXXXXXXXXRGLDFLAFKPSEIAAAVAMYVVGETQSVD--TDKTISILIQH 277
F+ + PS +AAA M ++ + D + +T + + +
Sbjct: 207 NAHWDFLNKCHRLLLSVISDSRFVGYLPSVVAAATMMRIIEQVDPFDPLSYQTNLLGVLN 266
Query: 278 VEKERLMKCVEMIHELSSNK 297
+ KE++ C ++I +L ++
Sbjct: 267 LTKEKVKTCYDLILQLPVDR 286
>AT5G67260.1 | Symbols: CYCD3;2 | CYCLIN D3;2 |
chr5:26836313-26837665 FORWARD LENGTH=367
Length = 367
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 147/266 (55%), Gaps = 21/266 (7%)
Query: 62 LPLLS------DECLAVMVEKECQFWP--GADYLNKFRTRDLDFGARKEAIDWIQKVRMH 113
LPLL DE L+ ++ KE + P G L+ F RKEA+DW+ +V+ H
Sbjct: 56 LPLLDMFLWDDDEILS-LISKENETNPCFGEQILDGFLV-----SCRKEALDWVLRVKSH 109
Query: 114 FGFGPLCAYLSINFFDRFLAVYEFPKGRAWTMQLLAVACLSLAAKIEETDVPLPLDLQVA 173
+GF L A L++N+FDRF+ + + W QL+AVA LSLAAK+EE VPL LDLQV
Sbjct: 110 YGFTSLTAILAVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVE 169
Query: 174 ESKFLFEAKTIQRMELLVLSTLKWKMQAITPFSFIDYYLRRVDDDGXXXXXXXXXXXXXX 233
E+++LFEAKTIQRMELL+LSTL+W+M +TP SF D+ +RR
Sbjct: 170 EARYLFEAKTIQRMELLILSTLQWRMHPVTPISFFDHIIRRFGSKWHQQLDFCRKCERLL 229
Query: 234 XXXXRGLDFLAFKPSEIAAAVAMYVVGETQ---SVDTDKTISILIQHVEKERLMKCVEMI 290
F+ + PS +A A+ + V E + V+ I+ L++ V +E++ +C E++
Sbjct: 230 ISVIADTRFMRYFPSVLATAIMILVFEELKPCDEVEYQSQITTLLK-VNQEKVNECYELL 288
Query: 291 HELSSNKDSSASAPCVPQ-SPIGVLE 315
L N V Q SP GVL+
Sbjct: 289 --LEHNPSKKRMMNLVDQDSPSGVLD 312
>AT4G03270.1 | Symbols: CYCD6;1 | Cyclin D6;1 | chr4:1432375-1433691
REVERSE LENGTH=302
Length = 302
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 145/306 (47%), Gaps = 25/306 (8%)
Query: 49 HHQRSQGFGDPDELPLLSDECLAVMVEKECQFWPGADYLNKFRTRDLDFGARKEAIDWIQ 108
H F D + L V E Q P + Y + ++ R +AI I
Sbjct: 11 HSSLHNNFNDDTDYETLPHSLFLV----EFQHMPSSHYFHSLKSSAFLLSNRNQAISSIT 66
Query: 109 KVRMHFGFGPLCAYLSINFFDRFLAVYEFPKGRAWTMQLLAVACLSLAAKIEETDVPLPL 168
+ F P YL++N+ DRFL+ + P+ + W ++L++++C+SL+AK+ + D+ +
Sbjct: 67 QYSRKFD-DPSLTYLAVNYLDRFLSSEDMPQSKPWILKLISLSCVSLSAKMRKPDMSVS- 124
Query: 169 DLQVAESKFLFEAKTIQRMELLVLSTLKWKMQAITPFSFIDYYLR----RVDDDGXXXXX 224
DL V E +F F+A+ I+RME ++L LKW+M+++TPFSF+ +++ + +D
Sbjct: 125 DLPV-EGEF-FDAQMIERMENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPLLLKHS 182
Query: 225 XXXXXXXXXXXXXRGLDFLAFKPSEIAAAVAMYVVGETQSVDTDKTISILIQ--HVEKER 282
+ FL FKPS IA A ++ E + + + Q +V K+
Sbjct: 183 LKSQTSDLTFSLQHDISFLEFKPSVIAGAALLFASFELCPLQFPCFSNRINQCTYVNKDE 242
Query: 283 LMKCVEMIHE----LSSNKDSSASAPCVPQSPIGVLEAGCFSYKSDVDTNAGSSCSSDNS 338
LM+C + I E + N+ S+ +A + VL+ S +SD +S S
Sbjct: 243 LMECYKAIQERDIIVGENEGSTETA-------VNVLDQQFSSCESDKSITITASSSPKRR 295
Query: 339 PSAKRR 344
++ RR
Sbjct: 296 KTSTRR 301
>AT4G37630.2 | Symbols: CYCD5;1 | cyclin d5;1 |
chr4:17679497-17680788 FORWARD LENGTH=321
Length = 321
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 73/117 (62%), Gaps = 1/117 (0%)
Query: 103 AIDWIQKVRMHFGFGPLCAYLSINFFDRFLAVYEFPKGRAWTMQLLAVACLSLAAKIEET 162
AIDWI R FGF AY++I++FD FL K W M+LL+VACLSLAAK+EE
Sbjct: 75 AIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGKDETWAMRLLSVACLSLAAKMEER 134
Query: 163 DVPLPLDLQVAESKFLFEAKTIQRMELLVLSTLKWKMQAITPFSFIDYYLRRVDDDG 219
VP L + F+F+ I++ ELL+LSTL WKM ITPF + +Y+L ++ D
Sbjct: 135 IVP-GLSQYPQDHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFLAKISQDN 190
>AT4G37630.1 | Symbols: CYCD5;1 | cyclin d5;1 |
chr4:17679497-17680788 FORWARD LENGTH=323
Length = 323
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 73/119 (61%), Gaps = 3/119 (2%)
Query: 103 AIDWIQKVRMHFGFGPLCAYLSINFFDRFLA--VYEFPKGRAWTMQLLAVACLSLAAKIE 160
AIDWI R FGF AY++I++FD FL K W M+LL+VACLSLAAK+E
Sbjct: 75 AIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGLQKDETWAMRLLSVACLSLAAKME 134
Query: 161 ETDVPLPLDLQVAESKFLFEAKTIQRMELLVLSTLKWKMQAITPFSFIDYYLRRVDDDG 219
E VP L + F+F+ I++ ELL+LSTL WKM ITPF + +Y+L ++ D
Sbjct: 135 ERIVP-GLSQYPQDHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFLAKISQDN 192
>AT5G02110.1 | Symbols: CYCD7;1, CYCD7 | CYCLIN D7;1 |
chr5:417087-418553 FORWARD LENGTH=341
Length = 341
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 115/251 (45%), Gaps = 5/251 (1%)
Query: 67 DECLAVMVEKECQFWPGADYLNKFRTRDLDFGARKEAIDWIQKVRMHFGFGPLCAYLSIN 126
+E +A+ +EKE F D +F R A W+ + R + + N
Sbjct: 45 EEAIAMDLEKELCFNNHGDKFVEFFVSKKLTDYRFHAFQWLIQTRSRLNLSYETVFSAAN 104
Query: 127 FFDRFLAVYEFPKGRAWTMQLLAVACLSLAAKIEETDVPLPLDLQVAESKFLFEAKTIQR 186
FDRF+ + + W ++L+AV LS+A+K E PL +L++ +F T+ +
Sbjct: 105 CFDRFVYMTCCDEWTNWMVELVAVTSLSIASKFNEVTTPLLEELEMEGLTHMFHVNTVAQ 164
Query: 187 MELLVLSTLKWKMQAITPFSFIDYYLRRVDDDGXXXXXXXXXXXXXXXXXXRGLDFLAFK 246
MEL++L L+W++ A+T ++F + ++ G L L +
Sbjct: 165 MELIILKALEWRVNAVTSYTFSQTLVSKIGMVGDHMIMNRITNHLLDVIC--DLKMLQYP 222
Query: 247 PSEIAAAVAMYVVGETQSVDTDKTISILIQHVEKERLMKCVEMIHELSSNKDSSASAPCV 306
PS +A A A++++ E + ++I L + KE+++KCV+ + + SS
Sbjct: 223 PSVVATA-AIWILMEDKVC--RESIMNLFEQNHKEKIVKCVDGMKNRDIDHQSSRRRYSE 279
Query: 307 PQSPIGVLEAG 317
+S + +L+ G
Sbjct: 280 GRSILSLLQRG 290
>AT1G20610.1 | Symbols: CYCB2;3 | Cyclin B2;3 | chr1:7135073-7137273
REVERSE LENGTH=429
Length = 429
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 93 RDLDFGARKEAIDWIQKVRMHFGFGPLCAYLSINFFDRFLAVYEFPKGRAWTMQLLAVAC 152
+DL+ R IDW+ +V F YL+IN DRFLAV++ + + +QL+ V
Sbjct: 203 QDLNERMRGILIDWLIEVHYKFELMEETLYLTINVIDRFLAVHQIVRKK---LQLVGVTA 259
Query: 153 LSLAAKIEETDVPLPLDLQVAESKFLFEAKTIQRMELLVLSTLKWKMQAITPFSFIDYYL 212
L LA K EE VP+ DL + K + + + ME L+ +TL++ TP+ F+ +L
Sbjct: 260 LLLACKYEEVSVPVVDDLILISDK-AYSRREVLDMEKLMANTLQFNFSLPTPYVFMKRFL 318
Query: 213 RRVDDD 218
+ D
Sbjct: 319 KAAQSD 324
>AT1G44110.1 | Symbols: CYCA1;1 | Cyclin A1;1 |
chr1:16775035-16777182 REVERSE LENGTH=460
Length = 460
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 57 GDPDELPLLSDECLAVMVEKECQFWPGADYLNKFRTRDLDFGARKEAIDWIQKVRMHFGF 116
GDP + + + E + P DY+ + + +D++ R +DW+ +V +
Sbjct: 186 GDPQLCATFACDIYKHLRASEAKKRPDVDYMERVQ-KDVNSSMRGILVDWLIEVSEEYRL 244
Query: 117 GPLCAYLSINFFDRFLAVYEFPKGRAWTMQLLAVACLSLAAKIEETDVPLPLDLQVAESK 176
P YL++N+ DR+L+ + + +QLL VAC+ +AAK EE P QV E
Sbjct: 245 VPETLYLTVNYIDRYLSGNVISRQK---LQLLGVACMMIAAKYEEICAP-----QVEEFC 296
Query: 177 FLFEAKTIQ----RMELLVLSTLKWKMQAITPFSFIDYYLR 213
++ + ++ ME VL+ LK++M A T F+ ++R
Sbjct: 297 YITDNTYLKDEVLDMESDVLNYLKFEMTAPTTKCFLRRFVR 337
>AT4G37490.1 | Symbols: CYC1, CYCB1;1, CYCB1 | CYCLIN B1;1 |
chr4:17622129-17624208 REVERSE LENGTH=428
Length = 428
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 81 WPGADYLNKFRTRDLDFGARKEAIDWIQKVRMHFGFGPLCAYLSINFFDRFLAVYEFPKG 140
W DY+ D++ R ++W+ V + F P YL++N DRFL+V P+
Sbjct: 180 WRPRDYMAS--QPDINEKMRLILVEWLIDVHVRFELNPETFYLTVNILDRFLSVKPVPRK 237
Query: 141 RAWTMQLLAVACLSLAAKIEETDVPLPLDLQVAESKFLFEAKTIQRMELLVLSTLKWKMQ 200
+QL+ ++ L ++AK EE P DL V + + K I ME +LSTL+W +
Sbjct: 238 E---LQLVGLSALLMSAKYEEIWPPQVEDL-VDIADHAYSHKQILVMEKTILSTLEWYLT 293
Query: 201 AITPFSFIDYYLR 213
T + F+ +++
Sbjct: 294 VPTHYVFLARFIK 306
>AT3G11520.1 | Symbols: CYCB1;3, CYC2 | CYCLIN B1;3 |
chr3:3625475-3627139 REVERSE LENGTH=414
Length = 414
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 94 DLDFGARKEAIDWIQKVRMHFGFGPLCAYLSINFFDRFLAVYEFPKGRAWTMQLLAVACL 153
++D R IDW+ +V + F P YL++N DRFL++ P+ +QL+ V+ L
Sbjct: 185 EIDEKMRSILIDWLVEVHVKFDLSPETLYLTVNIIDRFLSLKTVPRRE---LQLVGVSAL 241
Query: 154 SLAAKIEETDVPLPLDLQVAESKFLFEAKTIQRMELLVLSTLKWKMQAITPFSFIDYYLR 213
+A+K EE P DL V + + ++ I ME +L L+W + T + F+ +++
Sbjct: 242 LIASKYEEIWPPQVNDL-VYVTDNSYNSRQILVMEKTILGNLEWYLTVPTQYVFLVRFIK 300
Query: 214 RVDDD 218
D
Sbjct: 301 ASGSD 305
>AT1G77390.1 | Symbols: TAM, CYCA1;2, DYP, CYCA1 | CYCLIN A1;2 |
chr1:29081904-29084137 REVERSE LENGTH=442
Length = 442
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 77 ECQFWPGADYLNKFRTRDLDFGARKEAIDWIQKVRMHFGFGPLCAYLSINFFDRFLAVYE 136
E P DY+ + ++ ++ R IDW+ +V + P YL++N+ DR+L
Sbjct: 190 EVNKRPALDYMERTQS-SINASMRSILIDWLVEVAEEYRLSPETLYLAVNYVDRYLTGNA 248
Query: 137 FPKGRAWTMQLLAVACLSLAAKIEETDVPLPLDL-QVAESKFLFEAKTIQRMELLVLSTL 195
K +QLL V C+ +AAK EE VP D + ++ +L + ME VL+ L
Sbjct: 249 INKQ---NLQLLGVTCMMIAAKYEEVCVPQVEDFCYITDNTYL--RNELLEMESSVLNYL 303
Query: 196 KWKMQAITPFSFIDYYLR 213
K+++ T F+ +LR
Sbjct: 304 KFELTTPTAKCFLRRFLR 321
>AT1G76310.1 | Symbols: CYCB2;4 | CYCLIN B2;4 |
chr1:28628046-28630199 REVERSE LENGTH=431
Length = 431
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 75 EKECQFWPGADYLNKFRTRDLDFGARKEAIDWIQKVRMHFGFGPLCAYLSINFFDRFLAV 134
+ EC+ +Y+ D++ R DW+ +V F YL+IN DRFLAV
Sbjct: 187 KNECRSCVPPNYMEN--QHDINERMRGILFDWLIEVHYKFELMEETLYLTINLIDRFLAV 244
Query: 135 YEFPKGRAWTMQLLAVACLSLAAKIEETDVPLPLDLQVAESKFLFEAKTIQRMELLVLST 194
++ + +QL+ V + LA K EE VP+ DL + K + I ME L+ +T
Sbjct: 245 HQHIARKK--LQLVGVTAMLLACKYEEVSVPVVDDLILISDK-AYTRTEILDMEKLMANT 301
Query: 195 LKWKMQAITPFSFIDYYLRRVDDD 218
L++ TP+ F+ +L+ D
Sbjct: 302 LQFNFCLPTPYVFMRRFLKAAQSD 325
>AT5G11300.1 | Symbols: CYC3B, CYC2BAT, CYCA2;2 | mitotic-like
cyclin 3B from Arabidopsis | chr5:3601811-3604466
REVERSE LENGTH=436
Length = 436
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 15/142 (10%)
Query: 77 ECQFWPGADYLNKFRTRDLDFGARKEAIDWIQKVRMHFGFGPLCAYLSINFFDRFLAVYE 136
E Q P A+Y+ + RD+D RK IDW+ +V + P YL++N DRFL+
Sbjct: 184 ELQQRPLANYM-ELVQRDIDPDMRKILIDWLVEVSDDYKLVPDTLYLTVNLIDRFLSNSY 242
Query: 137 FPKGRAWTMQLLAVACLSLAAKIEETDVPLPLDLQVAESKFLFEAKTIQR-----MELLV 191
+ R +QLL V+C+ +A+K EE P V E F+ A T R ME+ +
Sbjct: 243 IERQR---LQLLGVSCMLIASKYEELSAP-----GVEEFCFI-TANTYTRPEVLSMEIQI 293
Query: 192 LSTLKWKMQAITPFSFIDYYLR 213
L+ + +++ T +F+ +++
Sbjct: 294 LNFVHFRLSVPTTKTFLRRFIK 315
>AT5G06150.1 | Symbols: CYC1BAT, CYCB1;2 | Cyclin family protein |
chr5:1859542-1861570 REVERSE LENGTH=445
Length = 445
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 94 DLDFGARKEAIDWIQKVRMHFGFGPLCAYLSINFFDRFLAVYEFPKGRAWTMQLLAVACL 153
+++ R IDW+ +V + F YL++N DRFL+V PK +QL+ ++ L
Sbjct: 208 EMNEKMRAILIDWLLEVHIKFELNLETLYLTVNIIDRFLSVKAVPKRE---LQLVGISAL 264
Query: 154 SLAAKIEETDVPLPLDLQVAESKFLFEAKTIQRMELLVLSTLKWKMQAITPFSFIDYYLR 213
+A+K EE P DL V + + ++ I ME +L L+W + T + F+ +++
Sbjct: 265 LIASKYEEIWPPQVNDL-VYVTDNAYSSRQILVMEKAILGNLEWYLTVPTQYVFLVRFIK 323
>AT5G25380.1 | Symbols: CYCA2;1 | cyclin a2;1 | chr5:8815230-8817566
FORWARD LENGTH=437
Length = 437
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 15/164 (9%)
Query: 55 GFGDPDELPLLSDECLAVMVEKECQFWPGADYLNKFRTRDLDFGARKEAIDWIQKVRMHF 114
G DP L + + E + P Y+ + + RD+D R IDW+ +V +
Sbjct: 163 GVQDPQFCSLYAASIYDSINVAELEQRPSTSYMVQVQ-RDIDPTMRGILIDWLVEVSEEY 221
Query: 115 GFGPLCAYLSINFFDRFLAVYEFPKGRAWTMQLLAVACLSLAAKIEETDVPLPLDLQVAE 174
YL++N DRF++ K + +QLL + C+ +A+K EE P ++ E
Sbjct: 222 KLVSDTLYLTVNLIDRFMSHNYIEKQK---LQLLGITCMLIASKYEEISAP-----RLEE 273
Query: 175 SKFLFEAKTIQRMELL-----VLSTLKWKMQAITPFSFIDYYLR 213
F+ + T R+E+L VL++L +++ T +F+ ++R
Sbjct: 274 FCFITD-NTYTRLEVLSMEIKVLNSLHFRLSVPTTKTFLRRFIR 316
>AT1G16330.1 | Symbols: CYCB3;1 | cyclin b3;1 | chr1:5582387-5587391
REVERSE LENGTH=648
Length = 648
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 58 DPDELPLLSDEC----LAVMVEKECQFWPGADYLNKFRTRDLDFGA------RKEAIDWI 107
+P++LP + DE +A V+ QF+ A+ LN L A R I+W+
Sbjct: 376 EPEKLPSIDDESNQLEVAEYVDDIYQFYWTAEALNPALGHYLSAHAEVSPVTRGILINWL 435
Query: 108 QKVRMHFGFGPLCAYLSINFFDRFLAVYEFPKGRAWTMQLLAVACLSLAAKIEETDVPLP 167
+V F YL+++ DR+L+ K MQL+ + L LA+K E+ P
Sbjct: 436 IEVHFKFDLMHETLYLTMDLLDRYLSQVPIHKNE---MQLIGLTALLLASKYEDYWHPRI 492
Query: 168 LDLQVAESKFLFEAKTIQRMELLVLSTLKWKMQAITPFSFIDYYLR 213
DL ++ S + + I ME +L LK+++ A TP+ F+ +L+
Sbjct: 493 KDL-ISISAESYTREQILGMERSMLKQLKFRLNAPTPYVFMLRFLK 537
>AT2G26760.1 | Symbols: CYCB1;4 | Cyclin B1;4 |
chr2:11401551-11403205 FORWARD LENGTH=387
Length = 387
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 104 IDWIQKVRMHFGFGPLCAYLSINFFDRFLAVYEFPKGRAWTMQLLAVACLSLAAKIEETD 163
IDW+ V F P YL+IN DRFL++ + +QLL + + +A K EE
Sbjct: 166 IDWLVDVHRKFELMPETLYLTINLVDRFLSLTMVHRRE---LQLLGLGAMLIACKYEEIW 222
Query: 164 VPLPLDLQVAESKFLFEAKTIQRMELLVLSTLKWKMQAITPFSFIDYYLR 213
P D V S + K + ME +L ++W + TP+ F+ Y++
Sbjct: 223 APEVNDF-VCISDNAYNRKQVLAMEKSILGQVEWYITVPTPYVFLARYVK 271
>AT5G43080.1 | Symbols: CYCA3;1 | Cyclin A3;1 |
chr5:17293227-17294789 FORWARD LENGTH=355
Length = 355
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 114/264 (43%), Gaps = 36/264 (13%)
Query: 77 ECQFWPGADYLNKFRTRDLDFGARKEAIDWIQKVRMHFGFGPLCAYLSINFFDRFLAVYE 136
E + P DY+ K + +D+ R +DW+ +V + YL++++ DRFL++
Sbjct: 99 EVKSRPLVDYIEKIQ-KDVTSNMRGVLVDWLVEVAEEYKLLSDTLYLAVSYIDRFLSLKT 157
Query: 137 FPKGRAWTMQLLAVACLSLAAKIEETDVPLPLDLQVAESKFLFEAKTIQRMELLVLSTLK 196
K R +QLL V + +A+K EE P +D + + + I +ME +L L+
Sbjct: 158 VNKQR---LQLLGVTSMLIASKYEEI-TPPNVDDFCYITDNTYTKQEIVKMEADILLALQ 213
Query: 197 WKMQAITPFSFIDYYLRRVDDDGXXXXXXXXXXXXXXXXXXRGLDF--LAFKPSEIAAA- 253
+++ T +F+ + R +D LD+ + F PS +AA+
Sbjct: 214 FELGNPTSNTFLRRFTRVAQEDFEMSHLQMEFLCSYLSELS-MLDYQSVKFLPSTVAASA 272
Query: 254 --VAMYVVGETQSVDTDKTISILIQHVEKER---LMKCVEMIHELSSNKDSS-------- 300
+A +++ Q +++++ + + L +CV MIH+L ++
Sbjct: 273 VFLARFIIRPKQH-----PWNVMLEEYTRYKAGDLKECVAMIHDLYLSRKCGALEAIREK 327
Query: 301 ---------ASAPCVPQSPIGVLE 315
A+ P P+ P+ V E
Sbjct: 328 YKQHKFKCVATMPVSPELPLTVFE 351
>AT1G47210.2 | Symbols: CYCA3;2 | cyclin-dependent protein kinase
3;2 | chr1:17301036-17302584 FORWARD LENGTH=372
Length = 372
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 5/137 (3%)
Query: 82 PGADYLNKFRTRDLDFGARKEAIDWIQKVRMHFGFGPLCAYLSINFFDRFLAVYEFPKGR 141
P DY+ K + +D+ R +DW+ +V + G YL+++ DRFL++ K +
Sbjct: 121 PLPDYIEKVQ-KDVTPSMRGVLVDWLVEVAEEYKLGSETLYLTVSHIDRFLSLKTVNKQK 179
Query: 142 AWTMQLLAVACLSLAAKIEETDVPLPLDLQVAESKFLFEAKTIQRMELLVLSTLKWKMQA 201
+QL+ V+ + +A+K EE P +D + F + + +ME +L L++++
Sbjct: 180 ---LQLVGVSAMLIASKYEEISPP-KVDDFCYITDNTFSKQDVVKMEADILLALQFELGR 235
Query: 202 ITPFSFIDYYLRRVDDD 218
T +F+ + R DD
Sbjct: 236 PTINTFMRRFTRVAQDD 252
>AT1G47230.1 | Symbols: CYCA3;4 | CYCLIN A3;4 |
chr1:17306752-17308587 FORWARD LENGTH=369
Length = 369
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 6/157 (3%)
Query: 63 PLLSDECLAVM-VEKECQFWPGADYLNKFRTRDLDFGARKEAIDWIQKVRMHFGFGPLCA 121
P SD C + +E + + P DY+ K ++ DL R +DW+ +V +
Sbjct: 94 PFASDICAYLREMEGKPKHRPLPDYIEKVQS-DLTPHMRAVLVDWLVEVAEEYKLVSDTL 152
Query: 122 YLSINFFDRFLAVYEFPKGRAWTMQLLAVACLSLAAKIEETDVPLPLDLQVAESKFLFEA 181
YL+I++ DRFL+V + + +QL+ V+ + +A+K EE P D F
Sbjct: 153 YLTISYVDRFLSVKPINRQK---LQLVGVSAMLIASKYEEIGPPKVEDFCYITDN-TFTK 208
Query: 182 KTIQRMELLVLSTLKWKMQAITPFSFIDYYLRRVDDD 218
+ + ME +L L++++ + T +F+ + R +D
Sbjct: 209 QEVVSMEADILLALQFELGSPTIKTFLRRFTRVAQED 245