Miyakogusa Predicted Gene

Lj1g3v1562450.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1562450.1 tr|D7MPH6|D7MPH6_ARALL Transcription factor/
transcription regulator (Fragment) OS=Arabidopsis
lyrat,29.1,9e-17,seg,NULL,CUFF.27536.1
         (359 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G64340.1 | Symbols: SAC51 | sequence-specific DNA binding tra...    79   4e-15
AT5G09460.1 | Symbols:  | sequence-specific DNA binding transcri...    77   2e-14
AT5G50010.1 | Symbols:  | sequence-specific DNA binding transcri...    72   5e-13

>AT5G64340.1 | Symbols: SAC51 | sequence-specific DNA binding
           transcription factors;transcription regulators |
           chr5:25730890-25731936 REVERSE LENGTH=348
          Length = 348

 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 115/253 (45%), Gaps = 40/253 (15%)

Query: 107 PCDESSSPQKQFLVVDQTCGRTTVV---YSSRFGSPNECLDSWHSKLYGTNYWSGNEPSF 163
           P     S QK+ L+ DQ+  +T ++   +  RF S         S+L G       E +F
Sbjct: 89  PLGALESSQKRLLIFDQSGDQTRLLQCPFPLRFPSHAAAEPVKLSELQGI------EKAF 142

Query: 164 RRDLNLNLNQMTGPTLADQVDENQGTDNESEMHEDTEEINALLXXXXXXXXXXXXXXXXX 223
           + D              ++  ++ GT  ESEMHEDTEEINALL                 
Sbjct: 143 KED-------------GEEFHKSDGT--ESEMHEDTEEINALLYSDDDYDDDCESDDE-- 185

Query: 224 VTSTGHSPSTMTTHDNHKTLRGTAEEVASSAGKAKKRKLVDGYN---DDIQVMDTANSLQ 280
           V STGHSP       N + L    EE+    G  K++KL+D  N   D   ++ T +S Q
Sbjct: 186 VMSTGHSPYPNEGVCNKREL----EEID---GPCKRQKLLDKVNNISDLSSLVGTESSTQ 238

Query: 281 HKKSPAVGDNDAESRCSYGNIEGSG----NKKMKKEKIRDVLSVLESIIPGGKDKNPVML 336
              S  + D       +    E +G    N++ KK+KIR  L +LES++PG K    ++L
Sbjct: 239 LNGSSFLKDKKLPESKTISTKEDTGSGLSNEQSKKDKIRTALKILESVVPGAKGNEALLL 298

Query: 337 LEDAISCLKSLKH 349
           L++AI  LK LK 
Sbjct: 299 LDEAIDYLKLLKR 311


>AT5G09460.1 | Symbols:  | sequence-specific DNA binding
           transcription factors;transcription regulators |
           chr5:2944437-2945417 REVERSE LENGTH=326
          Length = 326

 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 119/249 (47%), Gaps = 22/249 (8%)

Query: 106 APCDESSSPQKQFLVVDQTCGRTTVV---YSSRFGSPNECLDSWHSKLYGTNYWSGNEPS 162
           AP     S +K+F+V DQ+  +T ++   +  RF S    +D+    + G  +    E  
Sbjct: 83  APEGALKSSRKRFIVFDQSGEQTRLLQCGFPLRFPS---SMDAERGNILGALH---PEKG 136

Query: 163 FRRDLNLNLNQMTGPTLADQVDENQGTDNESEMHEDTEEINALLXXXXXXXXXXXXXXXX 222
           F +D  +    +       Q ++++  + +SEMHEDTEEINALL                
Sbjct: 137 FSKDHAIQEKIL-------QHEDHENGEEDSEMHEDTEEINALLYSDDDDNDDWESDDE- 188

Query: 223 XVTSTGHSPSTMTTHDNHKTLRGTAEEVASSAGKAKKR-KLVD-GYNDDIQVMDTANSLQ 280
            V STGHSP T+     + T     E  ++  G   KR KL+D  Y D    +     ++
Sbjct: 189 -VMSTGHSPFTVEQQACNITTEELDETESTVDGPLLKRQKLLDHSYRDSSPSLVGTTKVK 247

Query: 281 HKKSPAVGDNDAESRCSYGNIEGSGNKKMKKEKIRDVLSVLESIIPGGKDKNPVMLLEDA 340
                 + +++  S+   G+  G  +++ +K+KI   L +LES++PG K K  ++LL++A
Sbjct: 248 GLSDENLPESNISSKQETGS--GLSDEQSRKDKIHTALRILESVVPGAKGKEALLLLDEA 305

Query: 341 ISCLKSLKH 349
           I  LK LK 
Sbjct: 306 IDYLKLLKQ 314


>AT5G50010.1 | Symbols:  | sequence-specific DNA binding
           transcription factors;transcription regulators |
           chr5:20349556-20350491 FORWARD LENGTH=311
          Length = 311

 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 130/285 (45%), Gaps = 44/285 (15%)

Query: 69  GWFYCLPRFRQGFIPAPSFAAEEKPSADHVKGFRDKIAPCDESSSPQKQFLVVDQTCGRT 128
           GW +     +Q F+P  +   ++ P    V G    I+  +E  S QK+FLV DQ+  +T
Sbjct: 66  GWVHGSSHLQQQFLPPQNQCMKQVPL--QVDGV---ISKAEEQCS-QKRFLVFDQSGDQT 119

Query: 129 TVVYSSRFGSPNECLDSWHSKLYGTNYWSGNEPSFRRDLNLNLNQMTGPTLADQVDENQG 188
           T++ +S      E L                 P  + +L     Q +   L   V     
Sbjct: 120 TLLLASDIRKSFETLKQHAC------------PDMKEEL-----QRSNKDLF--VCHGMQ 160

Query: 189 TDNESEMHEDTEEINALLXXXXXXXXXXXXXXXXXVTSTGHSPSTMTT-HDNHKTLRGTA 247
            ++E ++ ED+EE+NALL                 VTS  HSPS + +  ++ KT  G+ 
Sbjct: 161 GNSEPDLKEDSEELNALLYSEDESGYCSEEDE---VTSADHSPSIVVSGREDQKTFLGSY 217

Query: 248 EEVASSAGKAKKRKLVDGYNDDIQVMDTANSLQHKKSPAVGDNDAESRCSYGNIEGSGNK 307
            +  +    AKKRK          +++T+N        + G  D  +R S+       + 
Sbjct: 218 GQPLN----AKKRK----------ILETSNESMRDAESSCGSCD-NTRISFLKRSKLSSN 262

Query: 308 KMKKEKIRDVLSVLESIIPGGKDKNPVMLLEDAISCLKSLKHKAK 352
           K+ +EKI + +S+L S++PG +  +P+++++ AI  LKSLK +AK
Sbjct: 263 KIGEEKIFETVSLLRSVVPGEELVDPILVIDRAIDYLKSLKMEAK 307