Miyakogusa Predicted Gene

Lj1g3v1559010.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1559010.2 tr|B9GN43|B9GN43_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_551661 PE=3
SV=1,33.22,4e-16,KINESIN-II HOMOLOGUE, PUTATIVE,NULL; FAMILY NOT
NAMED,NULL; coiled-coil,NULL; seg,NULL,CUFF.27511.2
         (498 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G60930.1 | Symbols:  | P-loop containing nucleoside triphosph...   136   3e-32
AT5G47820.2 | Symbols: FRA1 | P-loop containing nucleoside triph...   102   5e-22
AT5G47820.1 | Symbols: FRA1 | P-loop containing nucleoside triph...   102   5e-22
AT3G50240.1 | Symbols: KICP-02 | ATP binding microtubule motor f...    96   7e-20
AT5G33300.1 | Symbols:  | chromosome-associated kinesin-related ...    80   5e-15

>AT5G60930.1 | Symbols:  | P-loop containing nucleoside triphosphate
           hydrolases superfamily protein | chr5:24515398-24522511
           REVERSE LENGTH=1294
          Length = 1294

 Score =  136 bits (343), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/224 (40%), Positives = 136/224 (60%), Gaps = 9/224 (4%)

Query: 49  QMEIAELRKQKENGTSASDKGVEKLKKDYLQKLNLLEEQVTVLKNKLGSQSQFSTHRKKV 108
           Q EI  LR    +  S    G +KLK++Y+QKLN LE QV+VLK K  +Q+Q    ++K 
Sbjct: 602 QREIEGLRHNLASIPSGPGDGAQKLKEEYVQKLNTLETQVSVLKKKQDAQAQLMRQKQKS 661

Query: 109 DESTKQLQFEIQSLKAQKVQLQCKMKLQSVQSRLCXXXXXXXXXXXXXXGRRNDIKTQSL 168
           D++  +LQ EI  +K+QKVQLQ K+K +S Q R                GRRN+ +   L
Sbjct: 662 DDAAIKLQDEIHRIKSQKVQLQQKIKQESEQFRAWKASREKEVMQLKKEGRRNEYEMHKL 721

Query: 169 LASNEMLKIVLQRKTEEASAVTKRLRDLIEARKV----ILNRSNGARNRNGQVIQDAELE 224
           +A N+  K+VLQRKTEEAS VTKRL++L++ RK      L+ +NG   +   ++Q  E E
Sbjct: 722 MALNQKQKLVLQRKTEEASQVTKRLKELLDNRKASSRETLSGANGPGTQ--ALMQAIEHE 779

Query: 225 LEVTTQLHKLCYQYESKME---KMTEEIAQLKEEIEMHRQEKFS 265
           +EVT ++H++  +YE + E   +M +E+A+L+EE E+ +  K S
Sbjct: 780 IEVTVRVHEVRSEYERQTEERARMAKEVARLREENELLKNAKIS 823


>AT5G47820.2 | Symbols: FRA1 | P-loop containing nucleoside
           triphosphate hydrolases superfamily protein |
           chr5:19366505-19372229 FORWARD LENGTH=1035
          Length = 1035

 Score =  102 bits (255), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/205 (38%), Positives = 114/205 (55%), Gaps = 12/205 (5%)

Query: 65  ASDKGVEKLKKDYLQKLNLLEEQVTVLKNKLGSQSQFSTHRKKVDESTKQLQFEIQSLKA 124
           ASD   +KL+  + Q L  LE Q+  LK K  SQ Q    ++K D++ ++LQ EIQS+KA
Sbjct: 569 ASDGQAQKLQDVHAQNLKALEAQILDLKKKQESQVQLLKQKQKSDDAARRLQDEIQSIKA 628

Query: 125 QKVQLQCKMKLQSVQSRLCXXXXXXXXXXXXXXGRRNDIKTQSLLASNEMLKIVLQRKTE 184
           QKVQLQ +MK ++ Q R                GR+++ +   L A N+  K+VLQRKTE
Sbjct: 629 QKVQLQHRMKQEAEQFRQWKASREKELLQLRKEGRKSEYERHKLQALNQRQKMVLQRKTE 688

Query: 185 EASAVTKRLRDLIEARKVILNRSNGARN---RNGQVIQDA-----ELELEVTTQLHKLCY 236
           EA+  TKRL++L+EARK      +   N    NGQ  + +     + ELEV   +H++ +
Sbjct: 689 EAAMATKRLKELLEARKSSPREHSAGTNGFGTNGQTNEKSLQRWLDHELEVMVNVHEVRH 748

Query: 237 QYESKMEKMTEEIAQLKEEIEMHRQ 261
           +Y    EK +   A L EE+ + RQ
Sbjct: 749 EY----EKQSHVRAALAEELAVLRQ 769


>AT5G47820.1 | Symbols: FRA1 | P-loop containing nucleoside
           triphosphate hydrolases superfamily protein |
           chr5:19366505-19372229 FORWARD LENGTH=1035
          Length = 1035

 Score =  102 bits (255), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/205 (38%), Positives = 114/205 (55%), Gaps = 12/205 (5%)

Query: 65  ASDKGVEKLKKDYLQKLNLLEEQVTVLKNKLGSQSQFSTHRKKVDESTKQLQFEIQSLKA 124
           ASD   +KL+  + Q L  LE Q+  LK K  SQ Q    ++K D++ ++LQ EIQS+KA
Sbjct: 569 ASDGQAQKLQDVHAQNLKALEAQILDLKKKQESQVQLLKQKQKSDDAARRLQDEIQSIKA 628

Query: 125 QKVQLQCKMKLQSVQSRLCXXXXXXXXXXXXXXGRRNDIKTQSLLASNEMLKIVLQRKTE 184
           QKVQLQ +MK ++ Q R                GR+++ +   L A N+  K+VLQRKTE
Sbjct: 629 QKVQLQHRMKQEAEQFRQWKASREKELLQLRKEGRKSEYERHKLQALNQRQKMVLQRKTE 688

Query: 185 EASAVTKRLRDLIEARKVILNRSNGARN---RNGQVIQDA-----ELELEVTTQLHKLCY 236
           EA+  TKRL++L+EARK      +   N    NGQ  + +     + ELEV   +H++ +
Sbjct: 689 EAAMATKRLKELLEARKSSPREHSAGTNGFGTNGQTNEKSLQRWLDHELEVMVNVHEVRH 748

Query: 237 QYESKMEKMTEEIAQLKEEIEMHRQ 261
           +Y    EK +   A L EE+ + RQ
Sbjct: 749 EY----EKQSHVRAALAEELAVLRQ 769


>AT3G50240.1 | Symbols: KICP-02 | ATP binding microtubule motor
           family protein | chr3:18623380-18628784 REVERSE
           LENGTH=1051
          Length = 1051

 Score = 95.5 bits (236), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 121/220 (55%), Gaps = 12/220 (5%)

Query: 63  TSASDKGVEKLKKDYLQKLNLLEEQVTVLKNKLGSQSQFSTHRKKVDESTKQLQFEIQSL 122
            ++SD+  +  + ++  KL  LE Q+  LK K  +Q +    ++K +++ K+L+ EIQ +
Sbjct: 572 AASSDRQAQVARDNHAHKLKALETQILNLKKKQENQVEVLKQKQKSEDAAKRLKTEIQCI 631

Query: 123 KAQKVQLQCKMKLQSVQSRLCXXXXXXXXXXXXXXGRRNDIKTQSLLASNEMLKIVLQRK 182
           KAQKVQLQ KMK ++ Q R                GR+ + +   L A N   K+VLQRK
Sbjct: 632 KAQKVQLQQKMKQEAEQFRQWKASQEKELLQLKKEGRKTEHERLKLEALNRRQKMVLQRK 691

Query: 183 TEEASAVTKRLRDLIEARK-------VILNRSNGARNRNGQVIQDA-ELELEVTTQLHKL 234
           TEEA+  TKRL++L+EARK       VI N    +R  N + ++   + ELEV  ++H++
Sbjct: 692 TEEAAMATKRLKELLEARKSSPHDISVIANGQPPSRQTNEKSLRKWLDNELEVMAKVHQV 751

Query: 235 CYQYESKMEKMTEEIAQLKEEIEMHRQEKFSPMSQSQEEN 274
            +QYE +++      A L  E+   RQE   P +  QE+N
Sbjct: 752 RFQYEKQIQVR----AALAVELTSLRQEMEFPSNSHQEKN 787


>AT5G33300.1 | Symbols:  | chromosome-associated kinesin-related |
           chr5:12562649-12565675 REVERSE LENGTH=439
          Length = 439

 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 5/200 (2%)

Query: 97  SQSQFSTHRKKVDESTKQLQFEIQSLKAQKVQLQCKMKLQSVQSRLCXXXXXXXXXXXXX 156
           S+S  ST + K + S KQ   E+Q LKAQKV+L CK+KL S+Q RL              
Sbjct: 81  SKSMCSTKKYKTESSVKQFDGEVQKLKAQKVKLHCKIKLDSMQFRLLKASLEKEVLQLKK 140

Query: 157 XGRRNDIKTQSLLASNEMLKIVLQRKTEEASAVTKRLRDLIEARKVILNRSNGARNRNGQ 216
             R+++ +   L A N   K++LQ K  +A    KRL+ L++++K+  N+  G       
Sbjct: 141 ELRKSEFEKHVLSALNNRQKLILQLKNTQALTALKRLKMLLQSKKISSNKKKGPSKGTSS 200

Query: 217 VIQDAELELEVTTQLHKLCYQYESKMEKMTEEIAQLKEEIEMHRQEKF----SPMSQSQE 272
            IQ++  E  +  +L+K+   YE +M++M EEI +   E  + + E F    S  S S +
Sbjct: 201 EIQESSNESGLLMKLNKIHSDYERQMKEMAEEIKRFSLEAGLLKAE-FEGEQSSCSASCD 259

Query: 273 ENFDIMEKDSDIQDLKEQVN 292
              +    DS++++LKE+ N
Sbjct: 260 NQINHTPMDSELKELKEEFN 279