Miyakogusa Predicted Gene
- Lj1g3v1548830.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1548830.1 Non Chatacterized Hit- tr|I1K9S0|I1K9S0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53820
PE,78.99,0,PFTA,Protein prenyltransferase, alpha subunit;
LRR,Leucine-rich repeat; PPTA,Protein prenyltransfera,CUFF.27497.1
(693 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G24490.2 | Symbols: | RAB geranylgeranyl transferase alpha s... 643 0.0
AT4G24490.1 | Symbols: RGTA1, ATRGTA1 | RAB geranylgeranyl trans... 643 0.0
AT5G41820.1 | Symbols: RGTA2, ATRGTA2 | RAB geranylgeranyl trans... 528 e-150
AT3G59380.1 | Symbols: FTA, PLP, ATFTA, PFT/PGGT-IALPHA | farnes... 81 2e-15
>AT4G24490.2 | Symbols: | RAB geranylgeranyl transferase alpha
subunit 1 | chr4:12655330-12658103 REVERSE LENGTH=678
Length = 678
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/694 (51%), Positives = 455/694 (65%), Gaps = 27/694 (3%)
Query: 1 MHGRPRHPSKPEDATALAAKAEKLRSLQSQFLSNHHNRIYSKEALDLSAKLLEANPECYT 60
MHGRPR+ SKPE+ A AAKA +LRSLQSQF++NHH++IY+ EA++LS KLLE NPE YT
Sbjct: 1 MHGRPRNASKPEEEAASAAKAVQLRSLQSQFMTNHHDKIYTNEAIELSTKLLEINPEAYT 60
Query: 61 AWNYRKLAVXXXXXXXX---XXXXXXFDEELRVVESALRKNFKSYGAWHHRKWVLSKGHS 117
AWNYRKLAV DEELRVVESALR+NFKSYGAWHHRKWVLSKGHS
Sbjct: 61 AWNYRKLAVEDRLARIEPDPNLVSAILDEELRVVESALRQNFKSYGAWHHRKWVLSKGHS 120
Query: 118 SVDNELRLLNGFQKADPRNFHAWNYRRFVAGLMKRSDEDELKYTEEVIGANFSNYSAWHN 177
SV NELRLL FQK D RNFHAWNYRRFV L RS++DEL+YT+++I NFSNYSAWHN
Sbjct: 121 SVGNELRLLEKFQKLDSRNFHAWNYRRFVVELTNRSEQDELQYTDDMINNNFSNYSAWHN 180
Query: 178 RSALLSDLLKRKAEGYFPKEKVLEEEYEHVHNAIFTDPDDQSGWFYHLWLIDQTVKTDAP 237
RS LLS LL + A+G+ P K+ EEY+ VH+AIFT+PDDQSGWFYHLWL+DQT+ + P
Sbjct: 181 RSVLLSSLLAQNADGFMPNIKI-PEEYDFVHSAIFTEPDDQSGWFYHLWLLDQTLNVETP 239
Query: 238 LLVSSWPSDGSNITLNGNNCLHDCGLSLLNSTLSDTGTLPVILYFNQAVEGLNSSSVSVK 297
LL SSWPS GS+I L+G CL S+ + S++G+ P+ILYF+QAV G++SS+V++
Sbjct: 240 LLTSSWPSHGSSIILSGAGCLSGSS-SMFTTFCSESGSFPLILYFDQAVGGVSSSTVTID 298
Query: 298 SELI-KEDLVWKPLSTINSNTAKVWVAYLKLGNIELQSSKTYXXXXXXXXXXXXXXXXXX 356
SEL E LVW+P+ NS + VWVA LK + + K
Sbjct: 299 SELKGNEGLVWEPIPNKNSQVSCVWVARLKYVSSDPCEYKV-KIRVGNSPGIVSSRGYNF 357
Query: 357 XNPSQVAFKVCAQTAYTDPADQQCGKRTSWKDEDFQKID-HSEEPDSTLCADQIITENHH 415
P + F D + SW D F D S++ +S + D++ E
Sbjct: 358 NAPYEFVFTAHVHDTVEDSQE----GIVSWTD-GFDIWDAKSKDLNSLVTLDRLNAE--- 409
Query: 416 IPTKSIWSMEKIDEEITNFRDLLSEYDCKIGKLTLARLLTAFDLLSSQHDKRKCNTEEVL 475
W E ID E+ F L D KIGKLTLARLL A + + S + + EE+L
Sbjct: 410 --MDFKWRQEAIDSEVECFGILP---DSKIGKLTLARLLMAREAMVSDDAVKGVHYEEIL 464
Query: 476 QLYDDLMKLDPTHSLYYKDERSLVLLQQITSTRRCLLPYCHHYKDATETITGYVCLRLQN 535
QLY+DLM LD +H YYKDE S L ++TS+ L + Y+D + VCLRL N
Sbjct: 465 QLYNDLMALDSSHYQYYKDEHSKAFLHKVTSSSESLSRHLLRYRD----MNNLVCLRLNN 520
Query: 536 LSLSRMGSIKNLLWVQMLDLSHNELRSIEGLEAMQLLSCLNLSHNKIGSFTALGPLRLIK 595
LSLSR+ S++ LL+VQMLDLSHNEL S EGLEAMQLLSCLNLSHN+I SF+AL LR +K
Sbjct: 521 LSLSRIASVEKLLFVQMLDLSHNELHSTEGLEAMQLLSCLNLSHNRIRSFSALDSLRHVK 580
Query: 596 SLKVLNISYNELGSHSIDTTRYLCSSPLAHTEEFAWDRFETLAGSTRATNFWEAFLIFES 655
LKVL++S+N +G HS+DTTRYLCSSPL+++E D + G T +W+A+ +
Sbjct: 581 QLKVLDVSHNHIGKHSVDTTRYLCSSPLSNSELGQDDVGKQNPG--LVTKYWDAYCVLTD 638
Query: 656 MNLTELNITGNAVSDENFRSFIVKVLPTPKWLDG 689
+NL +L+I GN ++ E F SF+++V+P WLDG
Sbjct: 639 LNLKQLDIAGNEIAGEEFSSFVLQVVPKLVWLDG 672
>AT4G24490.1 | Symbols: RGTA1, ATRGTA1 | RAB geranylgeranyl
transferase alpha subunit 1 | chr4:12655330-12658103
REVERSE LENGTH=678
Length = 678
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/694 (51%), Positives = 455/694 (65%), Gaps = 27/694 (3%)
Query: 1 MHGRPRHPSKPEDATALAAKAEKLRSLQSQFLSNHHNRIYSKEALDLSAKLLEANPECYT 60
MHGRPR+ SKPE+ A AAKA +LRSLQSQF++NHH++IY+ EA++LS KLLE NPE YT
Sbjct: 1 MHGRPRNASKPEEEAASAAKAVQLRSLQSQFMTNHHDKIYTNEAIELSTKLLEINPEAYT 60
Query: 61 AWNYRKLAVXXXXXXXX---XXXXXXFDEELRVVESALRKNFKSYGAWHHRKWVLSKGHS 117
AWNYRKLAV DEELRVVESALR+NFKSYGAWHHRKWVLSKGHS
Sbjct: 61 AWNYRKLAVEDRLARIEPDPNLVSAILDEELRVVESALRQNFKSYGAWHHRKWVLSKGHS 120
Query: 118 SVDNELRLLNGFQKADPRNFHAWNYRRFVAGLMKRSDEDELKYTEEVIGANFSNYSAWHN 177
SV NELRLL FQK D RNFHAWNYRRFV L RS++DEL+YT+++I NFSNYSAWHN
Sbjct: 121 SVGNELRLLEKFQKLDSRNFHAWNYRRFVVELTNRSEQDELQYTDDMINNNFSNYSAWHN 180
Query: 178 RSALLSDLLKRKAEGYFPKEKVLEEEYEHVHNAIFTDPDDQSGWFYHLWLIDQTVKTDAP 237
RS LLS LL + A+G+ P K+ EEY+ VH+AIFT+PDDQSGWFYHLWL+DQT+ + P
Sbjct: 181 RSVLLSSLLAQNADGFMPNIKI-PEEYDFVHSAIFTEPDDQSGWFYHLWLLDQTLNVETP 239
Query: 238 LLVSSWPSDGSNITLNGNNCLHDCGLSLLNSTLSDTGTLPVILYFNQAVEGLNSSSVSVK 297
LL SSWPS GS+I L+G CL S+ + S++G+ P+ILYF+QAV G++SS+V++
Sbjct: 240 LLTSSWPSHGSSIILSGAGCLSGSS-SMFTTFCSESGSFPLILYFDQAVGGVSSSTVTID 298
Query: 298 SELI-KEDLVWKPLSTINSNTAKVWVAYLKLGNIELQSSKTYXXXXXXXXXXXXXXXXXX 356
SEL E LVW+P+ NS + VWVA LK + + K
Sbjct: 299 SELKGNEGLVWEPIPNKNSQVSCVWVARLKYVSSDPCEYKV-KIRVGNSPGIVSSRGYNF 357
Query: 357 XNPSQVAFKVCAQTAYTDPADQQCGKRTSWKDEDFQKID-HSEEPDSTLCADQIITENHH 415
P + F D + SW D F D S++ +S + D++ E
Sbjct: 358 NAPYEFVFTAHVHDTVEDSQE----GIVSWTD-GFDIWDAKSKDLNSLVTLDRLNAE--- 409
Query: 416 IPTKSIWSMEKIDEEITNFRDLLSEYDCKIGKLTLARLLTAFDLLSSQHDKRKCNTEEVL 475
W E ID E+ F L D KIGKLTLARLL A + + S + + EE+L
Sbjct: 410 --MDFKWRQEAIDSEVECFGILP---DSKIGKLTLARLLMAREAMVSDDAVKGVHYEEIL 464
Query: 476 QLYDDLMKLDPTHSLYYKDERSLVLLQQITSTRRCLLPYCHHYKDATETITGYVCLRLQN 535
QLY+DLM LD +H YYKDE S L ++TS+ L + Y+D + VCLRL N
Sbjct: 465 QLYNDLMALDSSHYQYYKDEHSKAFLHKVTSSSESLSRHLLRYRD----MNNLVCLRLNN 520
Query: 536 LSLSRMGSIKNLLWVQMLDLSHNELRSIEGLEAMQLLSCLNLSHNKIGSFTALGPLRLIK 595
LSLSR+ S++ LL+VQMLDLSHNEL S EGLEAMQLLSCLNLSHN+I SF+AL LR +K
Sbjct: 521 LSLSRIASVEKLLFVQMLDLSHNELHSTEGLEAMQLLSCLNLSHNRIRSFSALDSLRHVK 580
Query: 596 SLKVLNISYNELGSHSIDTTRYLCSSPLAHTEEFAWDRFETLAGSTRATNFWEAFLIFES 655
LKVL++S+N +G HS+DTTRYLCSSPL+++E D + G T +W+A+ +
Sbjct: 581 QLKVLDVSHNHIGKHSVDTTRYLCSSPLSNSELGQDDVGKQNPG--LVTKYWDAYCVLTD 638
Query: 656 MNLTELNITGNAVSDENFRSFIVKVLPTPKWLDG 689
+NL +L+I GN ++ E F SF+++V+P WLDG
Sbjct: 639 LNLKQLDIAGNEIAGEEFSSFVLQVVPKLVWLDG 672
>AT5G41820.1 | Symbols: RGTA2, ATRGTA2 | RAB geranylgeranyl
transferase alpha subunit 2 | chr5:16740804-16743433
FORWARD LENGTH=687
Length = 687
Score = 528 bits (1359), Expect = e-150, Method: Compositional matrix adjust.
Identities = 327/719 (45%), Positives = 434/719 (60%), Gaps = 59/719 (8%)
Query: 1 MHGRPRHPS-KPEDATALAAKAEKLRSLQSQFLSNHHNRIYSKEALDLSAKLLEANPECY 59
MHGR R PE+ AAKA +LRSLQSQF+SNHH +IY+KEA+ LSAKLL NPE Y
Sbjct: 1 MHGRKREEDPNPEET---AAKALELRSLQSQFMSNHHQKIYTKEAIQLSAKLLITNPEFY 57
Query: 60 TAWNYRKLAVXXXXXXXX--XXXXXXFDEELRVVESALRKNFKSYGAWHHRKWVLSK-GH 116
TAWNY KLA DEEL VV++AL +N KSYGAW+HRKWVLSK GH
Sbjct: 58 TAWNYPKLAFESRLDEDSDPSLVNSIIDEELGVVQNALERNVKSYGAWYHRKWVLSKKGH 117
Query: 117 --SSVDNELRLLNGFQKA-----------DP-RNFHAWNYRRFVAGLMKRSDEDELKYTE 162
S++NEL+LLN +QK DP RNFHAWNYRRFV L K S+EDEL+YT
Sbjct: 118 YYPSLENELQLLNDYQKQAHQKQDDEKQDDPSRNFHAWNYRRFVVELTKTSEEDELQYTT 177
Query: 163 EVIG-ANFSNYSAWHNRSALLSDLLKRKAEGYFPKEKVLEEEYEHVHNAIFTDPDDQSGW 221
++I +F+ YSAWH RS L+S L+ +KA+G+ PKE + E ++VH+AIFT + QSGW
Sbjct: 178 DMISDISFTIYSAWHYRSVLVSSLVAKKADGFMPKETI-RRELDYVHSAIFTLEEKQSGW 236
Query: 222 FYHLWLIDQTVKTDAPLLVSSWPSDGSNITLNGNNCLH-DCGLSLLNSTLSDTGTLPVIL 280
FY+LWL+DQTVK + PL SSWPSDGS I L+G +C + + L + S++G+ P+IL
Sbjct: 237 FYYLWLLDQTVKMEIPLRFSSWPSDGSIIILSGPDCFNASSSTTKLTTFCSESGSFPLIL 296
Query: 281 YFNQAVEGLNSSSVSVKSELIKEDLVWKPLSTINSNTAK--VWVAYLKLGNIELQSSKTY 338
YF+QAV G++SS+V++ SEL +DLVW+P+S ++ VWVA LK E S+
Sbjct: 297 YFDQAVSGVSSSTVTIGSEL--KDLVWEPVSDKKNSQVDSCVWVARLKFDCREPCFSRKE 354
Query: 339 XXXXXXXXXXXXXXXXXXXNPSQVAFKVCAQTAYTDPADQQCGKRTSWKDEDFQKIDHSE 398
P + F + QQ SW D F D
Sbjct: 355 TKVKVSLGGIVSSMGCNLTAPYEFVFTLRIHDTVEVELSQQ-ESIVSWTD-GFDNWD--- 409
Query: 399 EPDSTLCADQIITENHHIPTKSIWSMEKIDEEITNFRDLLSEYDCKIGKLTLARLLTAFD 458
D+ L D + T W + I EI FR L D KIGKL LARLL A +
Sbjct: 410 --DNALSNDLNSLTALNADTGFEWRKKAIKIEIELFRTLP---DSKIGKLILARLLMAEE 464
Query: 459 LLSSQHDKRKCNTEEVLQLYDDLMKLDPTHSLYYKDERSLVLLQQITSTRRCLLPYCHHY 518
+ S + +E+LQLY+DLM LD H+ YYKDE S+ L+ ++TS + + Y
Sbjct: 465 TMISN----GVHYKEILQLYNDLMALDSWHNQYYKDEHSVALIHKVTSRTESMSRHLFRY 520
Query: 519 KDATETITGYVCLRLQNLSLSRMGSIKNLLWVQMLDLSHNELRSIEGLEAMQLLSCLNLS 578
++ + +CLRL NL+LSR+ +++ LL+VQMLDLSHNEL S EGLEAMQLL CLNLS
Sbjct: 521 RN----MNNIICLRLNNLTLSRIAAVEKLLFVQMLDLSHNELHSAEGLEAMQLLCCLNLS 576
Query: 579 HNKIGSFTALGPLRLIKSLKVLNISYNEL-GSHSIDTTRYLCSSPLAHTEEFAWDRFETL 637
HN+I SF+AL LR +K L+VL++S+N + G +DTTRYLCSSPL+++ E
Sbjct: 577 HNRIRSFSALDSLRHLKQLRVLDVSHNHICGELPVDTTRYLCSSPLSNSGE--------- 627
Query: 638 AGSTRATNFWEAFLIFES-MNLTELNITGNAV--SDENFRSFIVKVLPTPKWLDGGELS 693
G + +A+L+ M L +L+I GN + + E F SF+ +V+P WLDG +L+
Sbjct: 628 TGREVPNKYQDAYLVLRDLMKLKQLDIRGNDLIFAGEEFSSFVRQVVPKLVWLDGHKLT 686
>AT3G59380.1 | Symbols: FTA, PLP, ATFTA, PFT/PGGT-IALPHA |
farnesyltransferase A | chr3:21944209-21945781 FORWARD
LENGTH=326
Length = 326
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 116/274 (42%), Gaps = 41/274 (14%)
Query: 11 PEDATALAAKAEKLRSLQSQFLSNHHNRIYSKEALDLSAKLLEANPECYTAWNYRKLAVX 70
P +A K E+ R F + + + S AL L+ + L N YT W++R+L +
Sbjct: 27 PNPVVPIAYK-EEFRETMDYFRAIYFSDERSPRALRLTEETLLLNSGNYTVWHFRRLVLE 85
Query: 71 XXXXXXXXXXXXXFDEELRVVESALRKNFKSYGAWHHRKWVLSK-GHSSVDNELRLLNGF 129
EEL +E N K+Y WHHR+WV K G EL
Sbjct: 86 ALNHDLF--------EELEFIERIAEDNSKNYQLWHHRRWVAEKLGPDVAGRELEFTRRV 137
Query: 130 QKADPRNFHAWNYRRFVAGLMKRSDEDELKYTEEVIGANFSNYSAWHNR------SALLS 183
D +++HAW++R++ + EDEL Y E++ A+ N SAW+ R S LL
Sbjct: 138 LSLDAKHYHAWSHRQWTLRALG-GWEDELDYCHELLEADVFNNSAWNQRYYVITQSPLLG 196
Query: 184 DLLKRKAEGYFPKEKVLEEEYEHVHNAIFTDPDDQSGWFYHLWLIDQTVKTDAPLLVSSW 243
L E + E E + AI T+P ++S W Y + K D SW
Sbjct: 197 GL-----------EAMRESEVSYTIKAILTNPANESSWRY----LKALYKDDK----ESW 237
Query: 244 PSDG--SNITLN---GNNCLHDCGLSLLNSTLSD 272
SD S++ LN +C H LS L L D
Sbjct: 238 ISDPSVSSVCLNVLSRTDCFHGFALSTLLDLLCD 271