Miyakogusa Predicted Gene
- Lj1g3v1537650.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1537650.1 tr|G7JSZ3|G7JSZ3_MEDTR F-box/FBD/LRR-repeat
protein OS=Medicago truncatula GN=MTR_4g092510 PE=4
SV=1,47.66,1e-17,no description,NULL; F-box domain,F-box domain,
cyclin-like; RNI-like,NULL; FAMILY NOT NAMED,NULL; F,CUFF.27478.1
(437 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G22720.2 | Symbols: | F-box/RNI-like superfamily protein | c... 76 4e-14
AT5G22720.1 | Symbols: | F-box/RNI-like superfamily protein | c... 76 4e-14
AT5G44950.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 71 2e-12
AT1G78760.1 | Symbols: | F-box/RNI-like superfamily protein | c... 70 4e-12
AT4G14096.1 | Symbols: | F-box/RNI-like superfamily protein | c... 69 5e-12
AT1G80470.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 69 6e-12
AT1G60400.1 | Symbols: | F-box/RNI-like superfamily protein | c... 68 1e-11
AT1G78840.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 67 2e-11
AT1G69630.1 | Symbols: | F-box/RNI-like superfamily protein | c... 66 5e-11
AT4G14103.2 | Symbols: | F-box/RNI-like superfamily protein | c... 66 5e-11
AT5G18780.2 | Symbols: | F-box/RNI-like superfamily protein | c... 66 5e-11
AT5G18780.1 | Symbols: | F-box/RNI-like superfamily protein | c... 66 5e-11
AT1G16930.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 66 6e-11
AT4G14103.1 | Symbols: | F-box/RNI-like superfamily protein | c... 66 6e-11
AT1G66310.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 64 2e-10
AT3G26922.1 | Symbols: | F-box/RNI-like superfamily protein | c... 63 5e-10
AT1G78750.1 | Symbols: | F-box/RNI-like superfamily protein | c... 62 7e-10
AT5G22660.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 62 1e-09
AT5G02930.1 | Symbols: | F-box/RNI-like superfamily protein | c... 62 1e-09
AT5G22660.2 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 62 1e-09
AT2G04230.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 61 1e-09
AT1G66300.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 61 2e-09
AT3G49040.1 | Symbols: | F-box/RNI-like superfamily protein | c... 60 2e-09
AT4G22280.1 | Symbols: | F-box/RNI-like superfamily protein | c... 60 2e-09
AT5G38390.1 | Symbols: | F-box/RNI-like superfamily protein | c... 60 2e-09
AT2G26030.3 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 60 3e-09
AT2G26030.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 60 3e-09
AT5G53640.1 | Symbols: | CONTAINS InterPro DOMAIN/s: F-box doma... 60 3e-09
AT3G49150.1 | Symbols: | F-box/RNI-like superfamily protein | c... 60 3e-09
AT5G15620.1 | Symbols: | F-box/RNI-like superfamily protein | c... 60 4e-09
AT4G22280.2 | Symbols: | F-box/RNI-like superfamily protein | c... 60 4e-09
AT5G53635.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 60 4e-09
AT1G13780.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 59 5e-09
AT5G44940.1 | Symbols: | F-box/RNI-like superfamily protein | c... 59 5e-09
AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 59 9e-09
AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 59 9e-09
AT5G27750.1 | Symbols: | F-box/FBD-like domains containing prot... 58 1e-08
AT1G60410.1 | Symbols: | F-box family protein | chr1:22259129-2... 57 2e-08
AT5G22700.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 57 2e-08
AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein | c... 57 2e-08
AT1G55030.1 | Symbols: | RNI-like superfamily protein | chr1:20... 57 3e-08
AT4G26350.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 57 4e-08
AT3G59190.1 | Symbols: | F-box/RNI-like superfamily protein | c... 56 4e-08
AT1G56610.2 | Symbols: | Protein with RNI-like/FBD-like domains... 55 8e-08
AT5G25850.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 55 1e-07
AT1G56610.1 | Symbols: | Protein with RNI-like/FBD-like domains... 55 1e-07
AT5G53840.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 55 1e-07
AT4G13960.1 | Symbols: | F-box/RNI-like superfamily protein | c... 55 1e-07
AT5G38590.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 55 1e-07
AT5G38590.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 55 1e-07
AT5G44980.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 55 1e-07
AT3G58930.1 | Symbols: | F-box/RNI-like superfamily protein | c... 55 1e-07
AT3G42770.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 2e-07
AT1G55660.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 54 2e-07
AT3G58860.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 3e-07
AT1G55660.2 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 54 3e-07
AT1G51370.3 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 53 3e-07
AT5G41840.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 3e-07
AT5G02920.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 4e-07
AT1G51370.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 53 4e-07
AT1G32375.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 53 4e-07
AT3G59200.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 4e-07
AT1G51370.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 53 4e-07
AT3G58880.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 4e-07
AT3G18150.1 | Symbols: | RNI-like superfamily protein | chr3:62... 53 5e-07
AT1G66320.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 5e-07
AT3G03040.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 6e-07
AT5G56690.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 52 6e-07
AT5G56820.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 7e-07
AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 7e-07
AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 7e-07
AT5G18770.1 | Symbols: | F-box/FBD-like domains containing prot... 52 8e-07
AT5G22730.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 8e-07
AT1G67390.1 | Symbols: | F-box family protein | chr1:25244690-2... 52 1e-06
AT4G13985.1 | Symbols: FBD1 | FBD-associated F-box protein | chr... 52 1e-06
AT5G56810.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 1e-06
AT3G58980.1 | Symbols: | F-box family protein | chr3:21794445-2... 51 1e-06
AT3G49030.2 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 51 1e-06
AT3G49030.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 51 1e-06
AT1G66290.1 | Symbols: | F-box/RNI-like superfamily protein | c... 51 1e-06
AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 51 2e-06
AT3G58920.1 | Symbols: | F-box/RNI-like superfamily protein | c... 51 2e-06
AT3G59230.1 | Symbols: | RNI-like superfamily protein | chr3:21... 51 2e-06
AT5G56440.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 51 2e-06
AT3G58960.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 2e-06
AT5G60610.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 2e-06
AT4G15060.1 | Symbols: | CONTAINS InterPro DOMAIN/s: FBD (Inter... 50 2e-06
AT4G09920.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 50 3e-06
AT1G49610.1 | Symbols: | F-box family protein | chr1:18361679-1... 50 3e-06
AT3G50710.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-06
AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-06
AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-06
AT4G00315.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-06
AT5G56370.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-06
AT5G56370.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-06
AT1G78730.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 50 3e-06
AT5G38565.1 | Symbols: | F-box/FBD-like domains containing prot... 50 4e-06
AT2G42730.1 | Symbols: | F-box family protein | chr2:17787454-1... 50 4e-06
AT5G22610.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 4e-06
AT5G44960.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 5e-06
AT3G59160.1 | Symbols: | F-box/RNI-like superfamily protein | c... 49 5e-06
AT3G59150.1 | Symbols: | F-box/RNI-like superfamily protein | c... 49 5e-06
AT2G42730.2 | Symbols: | F-box family protein | chr2:17789606-1... 49 7e-06
AT3G03030.1 | Symbols: | F-box/RNI-like superfamily protein | c... 49 8e-06
AT5G02910.1 | Symbols: | F-box/RNI-like superfamily protein | c... 49 9e-06
AT5G02910.2 | Symbols: | F-box/RNI-like superfamily protein | c... 49 9e-06
AT3G44060.1 | Symbols: | F-box/RNI-like superfamily protein | c... 49 1e-05
>AT5G22720.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:7547797-7551174 REVERSE LENGTH=675
Length = 675
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 7/159 (4%)
Query: 32 VEKAKRGRHXXXXXXXXXKVNNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWK 91
+E+ K R K D +S LPD ++ IL +++ + AV T +LS RW+ LW
Sbjct: 1 MEETKVKRTCLERTVCSSKAKEDLISQLPDSLITQILFYLQTKKAVTTSVLSKRWRSLWL 60
Query: 92 SLPSLILLSPDFSTLKIFTKFVSKLLEL-RDGSLPLHSFDFE-RHGSIEYIVHRRVVDYA 149
S P L+L+S DF+ F FV K L R+ L LH R G + R +D+
Sbjct: 61 STPGLVLISNDFTDYNAFVSFVDKFLGFSREQKLCLHKLKLSIRKGENDQDCVTRWIDFV 120
Query: 150 LSHNVQRLAMTVEYDYCHVARI-----FSCQSLTSLKLS 183
+ ++ L + + C + +SC+SL L+L+
Sbjct: 121 ATPKLKHLDVEIGPTRCECFEVIPLSLYSCESLLYLRLN 159
>AT5G22720.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:7547797-7551174 REVERSE LENGTH=642
Length = 642
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 7/159 (4%)
Query: 32 VEKAKRGRHXXXXXXXXXKVNNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWK 91
+E+ K R K D +S LPD ++ IL +++ + AV T +LS RW+ LW
Sbjct: 1 MEETKVKRTCLERTVCSSKAKEDLISQLPDSLITQILFYLQTKKAVTTSVLSKRWRSLWL 60
Query: 92 SLPSLILLSPDFSTLKIFTKFVSKLLEL-RDGSLPLHSFDFE-RHGSIEYIVHRRVVDYA 149
S P L+L+S DF+ F FV K L R+ L LH R G + R +D+
Sbjct: 61 STPGLVLISNDFTDYNAFVSFVDKFLGFSREQKLCLHKLKLSIRKGENDQDCVTRWIDFV 120
Query: 150 LSHNVQRLAMTVEYDYCHVARI-----FSCQSLTSLKLS 183
+ ++ L + + C + +SC+SL L+L+
Sbjct: 121 ATPKLKHLDVEIGPTRCECFEVIPLSLYSCESLLYLRLN 159
>AT5G44950.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:18151665-18153164
FORWARD LENGTH=438
Length = 438
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 142/322 (44%), Gaps = 46/322 (14%)
Query: 51 VNNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDF-STLKIF 109
+ DR+S+LPD +L HIL ++ +++T +LS+RW+ LW +P L + DF + +F
Sbjct: 1 MGRDRISELPDGLLNHILMYLHIEESIRTSVLSSRWRKLWLKVPGLDVNVHDFPADGNLF 60
Query: 110 TKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRV--VDYALSHNVQRLAMTV------ 161
+ K LE+ G L +F ++ Y++ R V + + +Q L +T
Sbjct: 61 ESLMDKFLEVNRGR--LQNFKLNYESNLYYLMDRFVPWIATVVDRGIQHLDVTATDCPPW 118
Query: 162 EYDYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSN 221
D+ A I ++L SLKL F S P ++L + L+
Sbjct: 119 TIDFMP-ANICKSKTLVSLKLVNVGLDTPKFVVSLPCLKIMHLEDIFYSPLIAENL---- 173
Query: 222 NGQVEPFSAFKKLHSLIIRNCTVKNAQTFC----ISSTTLVDVTMRTPFG----DFHKIE 273
S L L I V+N + F + S TL + + +G DF +E
Sbjct: 174 ------ISGCPVLEDLTI----VRNHEDFLNFLRVMSQTLKNFRLTFDWGMGSNDF-SVE 222
Query: 274 LSAPSLQRFDFTGSSPYKRLCGSSLSSVKELSIDAY----MGSYSPEPPL------VLLS 323
+ AP L+ F S R+ +LSS+ ++ +D G SP P ++
Sbjct: 223 IDAPGLKYMSFRDSQS-DRIVVKNLSSLVKIDLDTEFNLKFGLGSPLEPEDLTKRDIIRD 281
Query: 324 WLEELTNIKSLTVSTNTLQVLF 345
+L ++++K + +S TL+VL+
Sbjct: 282 FLTGISSVKHMIISHPTLEVLY 303
>AT1G78760.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:29615174-29616738 REVERSE LENGTH=452
Length = 452
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 154/335 (45%), Gaps = 38/335 (11%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
DRLS+LP+ ++ I+ + ++ V++ +LS RW++LW+ +P L + F F FV
Sbjct: 16 DRLSNLPESLICQIMLNIPTKDVVKSSVLSKRWRNLWRYVPGLNVEYNQFLDYNAFVSFV 75
Query: 114 SKLLELRDGSLPLHSFDF-----ERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYDYCHV 168
+ L L D SF E +I + +R ++ + ++ L + ++Y + +
Sbjct: 76 DRFLAL-DRESCFQSFRLRYDCDEEERTISNV--KRWINIVVDQKLKVLDV-LDYTWGNE 131
Query: 169 A-----RIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNG 223
+++C+SL SLKL + P ++LP + + L F SN
Sbjct: 132 EVQIPPSVYTCESLVSLKLC---------NVILPNPKVISLPLVKVIELDIVKF--SNAL 180
Query: 224 QVEP-FSAFKKLHSLIIRNCTVKNAQTFCISSTTLVD---VTMRTPFGDFHKIELSAPSL 279
+E S+ L SLII +V + +SS +L+ + + D ++ + AP L
Sbjct: 181 VLEKIISSCSALESLIISRSSVDDINVLRVSSRSLLSFKHIGNCSDGWDELEVAIDAPKL 240
Query: 280 QRFDFTGSSPYKRLCGSSLSSVKELSIDAYMGSYSPEPP-----LVLLSWLEELTNIKSL 334
+ + + S K +S S V+ + P P ++ +L E++++K L
Sbjct: 241 EYLNISDHSTAKFKMKNSGSLVEAKINIIFNMEELPHPNDRPKRKMIQDFLAEISSVKKL 300
Query: 335 TVSTNTLQVLFLIPDLVNRKLPFLSNLKSLKVKVQ 369
+S++TL+V I DL +LP NL SL + +
Sbjct: 301 FISSHTLEV---IHDL-GCELPLFRNLSSLHIDFE 331
>AT4G14096.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8124606-8126202 FORWARD LENGTH=468
Length = 468
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 150/335 (44%), Gaps = 41/335 (12%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSL-----ILLSPDFSTL-- 106
D +S LP+ + HILSF+ + A T +LS +W+ L+ +P+L + L+P+ T
Sbjct: 8 DIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVYLNPENETEVS 67
Query: 107 KIFTKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTV--EYD 164
F FV ++L L+ G+ PLH F + +E ++ L V L + V E +
Sbjct: 68 SSFMDFVDRVLALQ-GNSPLHKFSLKIGDGVEPDRIIPWINNVLERGVSDLDLHVYMETE 126
Query: 165 YCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQ 224
+ + +F ++L LKL ++P F + LP L +L++ F G
Sbjct: 127 FVFPSEMFLSKTLVRLKLMLYPLL--EFEDVY-------LPKLKTLYIDSCYFEKYGIGL 177
Query: 225 VEPFSAFKKLHSLIIRN---CTVKNAQTFCISSTTLVDVTMRTPFGD-FHK-IELSAPSL 279
+ S L L++ + CT A +S TL +T T D F K + + P+L
Sbjct: 178 TKLLSGCPILEDLVLDDIPWCTWDFAS---VSVPTLKRLTFSTQVRDEFPKSVSIDTPNL 234
Query: 280 QRFDFTG--SSPYKRLCGSSLSSVKELSID-----AYMGSYSPEPPLVLLSWLEELTNIK 332
FT + Y ++ + S+ E ID + G + ++ + N+K
Sbjct: 235 VYLKFTDTVAGKYPKV---NFDSLVEAHIDLRLLQGHQGYGENDMVGNATDFIMRICNVK 291
Query: 333 SLTVSTNTLQVLFLIPDLVNRKLPFLSNLKSLKVK 367
+L +S+NTLQVL D + P +NL L ++
Sbjct: 292 TLYLSSNTLQVLTYSCDAI----PIFNNLTHLTIE 322
>AT1G80470.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:30256185-30257916
FORWARD LENGTH=481
Length = 481
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 152/358 (42%), Gaps = 55/358 (15%)
Query: 52 NNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTK 111
+D +S L D +LL ILS V R +V T +S RW++LW+ +P+L L S F
Sbjct: 30 ESDWISGLADDLLLQILSKVPTRESVFTSRMSKRWRNLWRHVPALDLDSSKFPHESDLED 89
Query: 112 FVSKLLELRDGSLPLHSFDF----ERHGSIEYIVHRRVVDYALSHNVQRLAM----TVEY 163
F L+ DG+L + F + E H E++ +D+ + ++ L + +E
Sbjct: 90 FFDSFLQF-DGNLKIERFKWIYNVEEHCDPEFVSR---IDHVVKRGLKDLTILSKVNIED 145
Query: 164 DYCHV-ARIFSCQSLTSLKLSVHPKQYNTFSTSF--PISSCLNLPALTSLHLVGFTFHGS 220
D + ++SC +L +L L +S F P + ++LP L ++HL F G
Sbjct: 146 DSVRMPVSLYSCATLVNLTL---------YSVVFDAPRAQLVSLPCLKTMHLEAVKFDG- 195
Query: 221 NNGQVEPFSAFKKLHSLIIRNCTVKNAQTFCI-SSTTLVDVTMRTPF----------GDF 269
+ + +I +C+ + T L DV++R+P D+
Sbjct: 196 -----------ETILGTLISSCSFLDELTIITHDHDELGDVSVRSPSLRRFKLESMREDY 244
Query: 270 HK-----IELSAPSLQRFDFTGSSPYKRLCGSSLSSVKELSIDAYMGSYSPEPPLVLLSW 324
+ +E+ P L+ T + ++S +++ID + + V+ +
Sbjct: 245 DECEDPNVEVDTPGLEYMSITDYQS-ESFIIHNISPCAKVNIDVVFDAEDEDS--VIHDF 301
Query: 325 LEELTNIKSLTVSTNTLQVLFLIPDLVNRKLPFLSNLKSLKVKVQRLSYILRMTMIAA 382
+ ++ ++ LT+S TL+++ + +P SNL L S+ + T +
Sbjct: 302 ITAISTVRELTISARTLEMIHDYVESETELVPQFSNLFCLHASFSESSWEMFPTFLGC 359
>AT1G60400.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:22254405-22255798 FORWARD LENGTH=403
Length = 403
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 157/354 (44%), Gaps = 87/354 (24%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
DRLS LP+ +L ILS + +++V+T +LS W++LW +P L L + DF +F +F+
Sbjct: 14 DRLSALPEHLLCRILSELSTKDSVRTSVLSKHWRNLWLHVPVLELETSDFPDNLVFREFI 73
Query: 114 SKLLELRDGSLPLHSFDF----------ERHGSIEYIVHRRVVDYALSHN-----VQRLA 158
+ + D + L SFD + I+ +V RRV D +++N + +
Sbjct: 74 DRFVGF-DKEIDLKSFDIFYDVNVLWYDDFLWMIDDVVKRRVCDLMVTNNPYVVNEKLVK 132
Query: 159 MTVEYDYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFH 218
M + ++SC +L +L LS + P S + LP + +L+L G
Sbjct: 133 MPIS--------LYSCATLVNLNLSF------VAMNNLP-SESVCLPRVKTLYLHGVKLD 177
Query: 219 GSNNGQVEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGDFHKIE-LSAP 277
G + + ++ +C+V L D+T+ T GD+ K+ +
Sbjct: 178 GDS------------ILGTLVSSCSV------------LEDLTVVTHPGDYEKVVCFRSQ 213
Query: 278 SLQRFDFTGSSPYK---------RLCGSSLSSVKELSIDAY----MGSYSP--------- 315
S++ F YK RL ++E +++ +G Y+
Sbjct: 214 SVKSFTIESQCEYKDPNVEIDCPRL---EYMCIREYQSESFVVHSIGPYAKVDVDIFFEV 270
Query: 316 --EPPL---VLLSWLEELTNIKSLTVSTNTLQVLFLIPDLVNRKLPFLSNLKSL 364
E PL ++ ++L ++ ++ +T+S+ TL+V+ +V + LP SNL SL
Sbjct: 271 EYEDPLAISMIRNFLTGISKVREMTISSRTLEVIRGYHSMV-KALPQFSNLSSL 323
>AT1G78840.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:29639290-29640817
REVERSE LENGTH=439
Length = 439
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 153/338 (45%), Gaps = 49/338 (14%)
Query: 52 NNDRLSDL-PDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFT 110
N D +S L PD VL IL + +++V+T ILSTRW+ +W+ +P L L +F K
Sbjct: 3 NKDLISQLLPDHVLHEILLKLATKDSVKTSILSTRWRYIWQRVPGLDLNQTNFR-YKGLK 61
Query: 111 KFVSKLLELRDGSLPLH---SFD---FERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYD 164
FV++ L+L SL FD +E GS+ + VD ++ VQ L +
Sbjct: 62 GFVNRFLDLDKKSLIYQLKLEFDGRKYETEGSL----FNKWVDSVVTRGVQHLV----NN 113
Query: 165 YCHV---ARIFSCQSLTSLKL-SVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGS 220
YC + I C++L LKL V +++ S LP L ++HL+ F S
Sbjct: 114 YCPIKLPGSISMCETLVHLKLVEVGIDSFDSVS----------LPRLETMHLLSVWF--S 161
Query: 221 NNGQVEPF-SAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGDFH------KIE 273
+ +E S+ L L I V N + + S TL + MR D KI
Sbjct: 162 SEAALERLISSSPVLQVLYIEK--VWNVEVIRVRSQTLYSLRMRIWKRDLDWNKDLTKIG 219
Query: 274 L--SAPSLQRFDFTGSSPYKRLCGSSLSSVKELSIDAYMGSYSPEPPL---VLLSWLEEL 328
L AP L+ + +K L +S+ S ++ I G ++P L L +++ +
Sbjct: 220 LVIDAPRLKSLNLQIHR-FKDLVLNSVCSPLKVDISISKGEFNPINSLTMKTLRTFIAWI 278
Query: 329 TNIKSLTVSTNTLQVLFLIPDLVNRKLPFLSNLKSLKV 366
+N+ +L ++ L+ ++ + LP SNL L+V
Sbjct: 279 SNVTNLALNYCCLEAMYAYSS--SEPLPQFSNLTHLEV 314
>AT1G69630.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:26191640-26193174 REVERSE LENGTH=451
Length = 451
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 9/137 (6%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
D +S LPDC+L +L + ++ V+T +LS RW++LWK +P L L + DF F FV
Sbjct: 18 DWISKLPDCLLCEVLLNLPTKDVVKTSVLSRRWRNLWKHVPGLDLDNTDFQEFNTFLSFV 77
Query: 114 SKLLELRDGSLPLHSFDFERHGSIEY----IVHRRVVDYALSHNVQRL-AMTVEYDYCHV 168
L+ S L F + EY + R ++ ++ VQ + + Y V
Sbjct: 78 DSFLDFNSESF-LQKFILKYDCDDEYDPDIFLIGRWINTIVTRKVQHIDVLDDSYGSWEV 136
Query: 169 ---ARIFSCQSLTSLKL 182
+ I++C+SL SLKL
Sbjct: 137 QLPSSIYTCESLVSLKL 153
>AT4G14103.2 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8126948-8128590 FORWARD LENGTH=443
Length = 443
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 148/334 (44%), Gaps = 32/334 (9%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSL-----ILLSPDFSTL-- 106
D +S LPD + HILSF+ + A T +LS +W+ L+ +P+L + L+P+ T
Sbjct: 8 DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEIS 67
Query: 107 KIFTKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLA--MTVEYD 164
F FV ++L L+ G+ PLH F + I+ + ++ L V L + +E +
Sbjct: 68 TSFMDFVDRVLALQ-GNSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHLNLESE 126
Query: 165 YCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQ 224
+ ++++ C++L LKL Y T ++LP L +L++ F G
Sbjct: 127 FLLPSQVYLCKTLVWLKLRF--GLYPTIDV-----EDVHLPKLKTLYIEATHFEEHGVGL 179
Query: 225 VEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGD-FHK-IELSAPSLQRF 282
+ S L L++ + + +S TL + D F K + L P+L
Sbjct: 180 TKLLSGCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQERDEFPKSVLLDTPNLVYL 239
Query: 283 DFTG--SSPYKRLCGSSLSS-------VKELSIDAYMGSYSPEPPLVLLSWLEELTNIKS 333
FT + Y ++ SL +K L I+ + G + ++ + N+K+
Sbjct: 240 KFTDTVAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGNATDFIMRICNVKT 299
Query: 334 LTVSTNTLQVLFLIPDLVNRKLPFLSNLKSLKVK 367
L +S NTLQVL D + P +NL L ++
Sbjct: 300 LYLSANTLQVLTYSCDAI----PIFNNLTHLTIE 329
>AT5G18780.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:6264610-6266097 FORWARD LENGTH=441
Length = 441
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 30/309 (9%)
Query: 52 NNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTK 111
DR+S LP+ +L HILSF++ +++V+T +LS+RW+DLW +P L L DFS
Sbjct: 9 GEDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRLDLDKSDFSDDNPSAS 68
Query: 112 FVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSH----NVQRLAMTVEYDYCH 167
FV K L R G L F + I +D L +Q + + +C
Sbjct: 69 FVDKFLNFR-GESYLRGFKLNTDHDVYDI---STLDACLMRLDKCKIQHFEIENCFGFCI 124
Query: 168 VAR---IFSCQSLTSLKLS-VHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNG 223
+ I C +L SLKLS V ++ + L+LP L +H F +
Sbjct: 125 LLMPLIIPMCHTLVSLKLSFVILSKFGS----------LSLPCLEIMHFEKVIFPSDKSA 174
Query: 224 QVEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGDF-----HKIELSAPS 278
+V + L L I + + S +L T++ D+ + + + P
Sbjct: 175 EV-LIACSPVLRDLRISQSGDDAVEVLRVCSASLKSFTLKRTDHDYVGNGEYTVVIDTPR 233
Query: 279 LQRFDFTG--SSPYKRLCGSSLSSVKELSIDAYMGSYSPEPPLVLLSWLEELTNIKSLTV 336
L+ + +K + S V + +G ++ +L ++N++ +T+
Sbjct: 234 LEYLNLKDYQCQGFKIVSMSEYVRVHVDVVFEVIGGTVLSKRNIICDFLSCVSNVRYMTI 293
Query: 337 STNTLQVLF 345
S +L+ ++
Sbjct: 294 SRRSLEFIY 302
>AT5G18780.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:6264610-6266097 FORWARD LENGTH=441
Length = 441
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 130/309 (42%), Gaps = 30/309 (9%)
Query: 52 NNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTK 111
DR+S LP+ +L HILSF++ +++V+T +LS+RW+DLW +P L L DFS
Sbjct: 9 GEDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRLDLDKSDFSDDNPSAS 68
Query: 112 FVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSH----NVQRLAMTVEYDYCH 167
FV K L R G L F + I +D L +Q + + +C
Sbjct: 69 FVDKFLNFR-GESYLRGFKLNTDHDVYDI---STLDACLMRLDKCKIQHFEIENCFGFCI 124
Query: 168 VAR---IFSCQSLTSLKLS-VHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNG 223
+ I C +L SLKLS V ++ + L+LP L +H F +
Sbjct: 125 LLMPLIIPMCHTLVSLKLSFVILSKFGS----------LSLPCLEIMHFEKVIFPSDKSA 174
Query: 224 QVEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGDF-----HKIELSAPS 278
+V + L L I + + S +L T++ D+ + + + P
Sbjct: 175 EV-LIACSPVLRDLRISQSGDDAVEVLRVCSASLKSFTLKRTDHDYVGNGEYTVVIDTPR 233
Query: 279 LQRFDFTG--SSPYKRLCGSSLSSVKELSIDAYMGSYSPEPPLVLLSWLEELTNIKSLTV 336
L+ + +K + S V + +G ++ +L ++N++ +T+
Sbjct: 234 LEYLNLKDYQCQGFKIVSMSEYVRVHVDVVFEVIGGTVLSKRNIICDFLSCVSNVRYMTI 293
Query: 337 STNTLQVLF 345
S +L+ ++
Sbjct: 294 SRRSLEFIY 302
>AT1G16930.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:5789987-5791534
FORWARD LENGTH=449
Length = 449
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 142/340 (41%), Gaps = 52/340 (15%)
Query: 52 NNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTK 111
N+DR+S+LPD +L ILS + + +V T +LS RW++LW +P L L S +F +F
Sbjct: 13 NSDRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLDSNNFPDDDVFVS 72
Query: 112 FVSKLLELRDGS--------LPLHSFDFERHGS-IEYIVHRRVVDYALSHNVQRLAMTVE 162
FV++ L + ++ D R S I ++ RRV + + + V V+
Sbjct: 73 FVNRFLGSENEQHLERFKLIYEVNEHDASRFKSWINAVIKRRVCHFNVHNEVDDDDELVK 132
Query: 163 YDYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNN 222
++SC+ L +L+L + + ++LP + +HL + +
Sbjct: 133 MPL----SLYSCERLVNLQL---------YRVALDHPESVSLPCVKIMHLDMVKYDADST 179
Query: 223 GQVEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPF--GDFHKIELSAPSLQ 280
++ S L L I + + C+ S +L + + H + + AP L+
Sbjct: 180 LEI-LISGCPVLEELTIVRDPNDSLEVVCVRSQSLKSFKIDSERYESQNHVVTIDAPRLE 238
Query: 281 RFDFTGSSPYKRLCG--------SSLSSVKELSIDA-----YMGSYSPEPP---LVLLSW 324
Y LC ++ ++ ID Y P+ +L +
Sbjct: 239 ---------YMNLCDHRSDSFIIHNIGPFAKVDIDVIFNVEYNDPLEPDDSSKIAMLGKF 289
Query: 325 LEELTNIKSLTVSTNTLQVLFLIPDLVNRKLPFLSNLKSL 364
L L+ + + +S++TLQV+ + +LP SNL L
Sbjct: 290 LTGLSTVSEMVISSDTLQVIHDYCKM--EQLPQFSNLSRL 327
>AT4G14103.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8126948-8128305 FORWARD LENGTH=381
Length = 381
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 148/334 (44%), Gaps = 32/334 (9%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSL-----ILLSPDFSTL-- 106
D +S LPD + HILSF+ + A T +LS +W+ L+ +P+L + L+P+ T
Sbjct: 8 DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEIS 67
Query: 107 KIFTKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLA--MTVEYD 164
F FV ++L L+ G+ PLH F + I+ + ++ L V L + +E +
Sbjct: 68 TSFMDFVDRVLALQ-GNSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHLNLESE 126
Query: 165 YCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQ 224
+ ++++ C++L LKL Y T ++LP L +L++ F G
Sbjct: 127 FLLPSQVYLCKTLVWLKLRF--GLYPTIDV-----EDVHLPKLKTLYIEATHFEEHGVGL 179
Query: 225 VEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGD-FHK-IELSAPSLQRF 282
+ S L L++ + + +S TL + D F K + L P+L
Sbjct: 180 TKLLSGCPMLEDLVLDDISWFIWDFASVSVPTLKRLRFSWQERDEFPKSVLLDTPNLVYL 239
Query: 283 DFTG--SSPYKRLCGSSLSS-------VKELSIDAYMGSYSPEPPLVLLSWLEELTNIKS 333
FT + Y ++ SL +K L I+ + G + ++ + N+K+
Sbjct: 240 KFTDTVAGKYPKVNLDSLVEAHIDLRLLKPLLINYHQGYGENDMVGNATDFIMRICNVKT 299
Query: 334 LTVSTNTLQVLFLIPDLVNRKLPFLSNLKSLKVK 367
L +S NTLQVL D + P +NL L ++
Sbjct: 300 LYLSANTLQVLTYSCDAI----PIFNNLTHLTIE 329
>AT1G66310.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:24722971-24724475
REVERSE LENGTH=442
Length = 442
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 106/246 (43%), Gaps = 41/246 (16%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
D L DLP+ +L HIL + ++ V+T +LS++W++LW+ +P L L S DF+ F F+
Sbjct: 19 DWLRDLPESLLCHILLNLPTKDVVKTSVLSSKWRNLWRLVPGLDLDSSDFTENNTFVSFI 78
Query: 114 SKLL----ELRDGSLPLHSFDFERHGSIEYIVH-RRVVDYALSHNVQRLAMTVEYDYCHV 168
+ + +L L F + H R ++ + V L +T + +
Sbjct: 79 DRFMSFHSDLYLKKFKLRFFCNLNGDEVSENAHIARWINDVVKRKVHNLDLT--WGAVEI 136
Query: 169 ARI-FSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQVEP 227
I + C SL SLKL + P +LP + + L F +N+ +E
Sbjct: 137 PPILYLCNSLVSLKLC---------GVTLPNLELTSLPCVKVIVLEWVKF--ANDLALE- 184
Query: 228 FSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGDFHKIELSAPSLQRFDFTGS 287
++I C V + T C R P + + +S+ SL RF + GS
Sbjct: 185 ---------MLISGCLVLESLTLC-----------RRPNDNVKILRVSSQSLLRFSYNGS 224
Query: 288 SPYKRL 293
S YK L
Sbjct: 225 S-YKGL 229
>AT3G26922.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:9922858-9923891 FORWARD LENGTH=306
Length = 306
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 144/302 (47%), Gaps = 24/302 (7%)
Query: 51 VNNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLIL-LSPDFSTLKIF 109
VN DR+SDLP+ +LL ILS + ++ V T +LS W+ LWK +P+L + S + +
Sbjct: 11 VNEDRISDLPEALLLQILSMLPVKDVVTTSVLSKPWRSLWKLVPTLKFDYENNQSEDETY 70
Query: 110 TKFVSKLLELRDGSLPLHSFDFE-RHGSIEYIVHRRVVDYALSHNVQRLAMTVEY---DY 165
++ V +LL L + + L S R G + + A + +V+ L + VE +
Sbjct: 71 SEIVCRLL-LSNKAPFLESLHLGFRFGECRSVEVGMWIGIAYARHVRDLVLHVESVKGSF 129
Query: 166 CHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQV 225
+++C++L SL L + P +CL +L +L L + ++
Sbjct: 130 IFPTGLYNCETLESLTLR------SWVLVDVPSPACLK--SLRTLRLENVDYK-YDDSVY 180
Query: 226 EPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPF-GDF-HKIELSAPSLQRFD 283
S L +L++ + +TF I+ +L +T+ G++ ++APSL+
Sbjct: 181 NLLSGCPNLENLVVYRGNLLEVETFTIAVPSLQRLTIYDDNDGEYCTGYVINAPSLKYLK 240
Query: 284 FTGSSPYKRLCGSSLSSVKELSIDAYMGSYSPEPPLVLLSWLEELTNIKSLTVSTNTLQV 343
G +K L + + EL ++A + + S ++ LE LT++K L+++ + L++
Sbjct: 241 IDG---FKALESCLIENAPEL-VEATIMNVS---KIINEKLLETLTSVKRLSLALSPLEL 293
Query: 344 LF 345
F
Sbjct: 294 KF 295
>AT1G78750.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:29613122-29614695 REVERSE LENGTH=458
Length = 458
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 152/342 (44%), Gaps = 45/342 (13%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFT--- 110
D +S+LP+ +L +L ++ ++ V++ +LS+RW++LWK +P L DF F+
Sbjct: 18 DWISNLPETLLCQVLFYLPTKDVVKSSVLSSRWRNLWKYVPGFNLSYCDFHVRNTFSYDH 77
Query: 111 ----KFVSKLLELRDGSLPLHSFDFER----HGSIEYIVHRRVVDYALSHNVQRLAMTVE 162
+FV + S L SF E +G + + RR ++ +S V+ L + +
Sbjct: 78 NTFLRFVDSFMGFNSQSC-LQSFRLEYDSSGYGEPKLALIRRWINSVVSRKVKYLGVLDD 136
Query: 163 ----YDYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHL--VGFT 216
Y++ +++C++L L L + S + P ++LP+L LHL V F
Sbjct: 137 SCDNYEFEMPPTLYTCETLVYLTL-------DGLSLASP--KFVSLPSLKELHLSIVKFA 187
Query: 217 FHGSNNGQVEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGDFHK----I 272
H + + S L +L I + + C+ S +L+ T + +
Sbjct: 188 DHMALETLI---SQCPVLENLNINRSFCDDFEFTCVRSQSLLSFTHVADTDEMLNEDLVV 244
Query: 273 ELSAPSLQRFDFTGSSPYKRLCGSSLSSVKELSIDAYMG-----SYSP---EPPLVLLSW 324
+ AP L+ + + L+S+ E ID ++P ++ +
Sbjct: 245 AIDAPKLKYLRLSDHR-IASFILNDLASLVEADIDTVFNLICKKMFNPNDLNKRNMIRDF 303
Query: 325 LEELTNIKSLTVSTNTLQVLFLIPDLVNRKLPFLSNLKSLKV 366
L +++IK+L ++++TL+V++ LP NL SL+V
Sbjct: 304 LVGISSIKTLIIASSTLEVIYDYSRC--EPLPLFRNLSSLRV 343
>AT5G22660.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein | chr5:7536906-7537853
REVERSE LENGTH=315
Length = 315
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
DR+S LPD +L ILS + NAV T ILSTRWKDLW S P L + F F F
Sbjct: 13 DRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLWLSTPVLDIDIDAFDDATTFISFA 72
Query: 114 SKLLE-LRDGSLPLHSFDFERHGS--------IEYIVHRRV----VDYALSHNVQRLAMT 160
++ L+ +D L F+ IE V RR+ VD + H + L +T
Sbjct: 73 TRFLDSFKDSCLHKLQISFQMEAVDMWTIIPWIEDAVKRRIQHLEVDSRIDHMIDTLPLT 132
Query: 161 VEYDYCHVARIFSCQSLTSLKL 182
V + +SL SL+L
Sbjct: 133 V----------YLSESLVSLRL 144
>AT5G02930.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:682577-684480 FORWARD LENGTH=469
Length = 469
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 51 VNNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFT 110
V D +SDLPD VL HI S++ A++T +LS RW+ +W P L F LK+
Sbjct: 25 VGVDSISDLPDAVLQHIFSYIPTELAIRTSVLSKRWRHVWSETPHL-----SFEWLKVSP 79
Query: 111 KFVSKLLELRDGSLPLHSFDFERHGSIEYIVHR--RVVDYALSHNVQRLAM 159
K ++K L S + SF S E H +++A+SHNV L++
Sbjct: 80 KLINKTLASYTAS-KIKSFHLCTRYSYEADTHHVNSSIEFAMSHNVDDLSL 129
>AT5G22660.2 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein | chr5:7536328-7537853
REVERSE LENGTH=450
Length = 450
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
DR+S LPD +L ILS + NAV T ILSTRWKDLW S P L + F F F
Sbjct: 13 DRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLWLSTPVLDIDIDAFDDATTFISFA 72
Query: 114 SKLLE-LRDGSLPLHSFDFERHGS--------IEYIVHRRV----VDYALSHNVQRLAMT 160
++ L+ +D L F+ IE V RR+ VD + H + L +T
Sbjct: 73 TRFLDSFKDSCLHKLQISFQMEAVDMWTIIPWIEDAVKRRIQHLEVDSRIDHMIDTLPLT 132
Query: 161 VEYDYCHVARIFSCQSLTSLKL 182
V + +SL SL+L
Sbjct: 133 V----------YLSESLVSLRL 144
>AT2G04230.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr2:1447025-1448678
REVERSE LENGTH=448
Length = 448
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 102/253 (40%), Gaps = 28/253 (11%)
Query: 51 VNNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLIL---LSPDFSTLK 107
+N DR+SDLPD +LL ILS + NA+ T +LS RW+ LW LP L +P F
Sbjct: 10 MNEDRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDSNFNPVFDDDN 69
Query: 108 I----FTKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEY 163
I F++ V K L L + L S G + + + A + V++L + Y
Sbjct: 70 IDPTMFSENVYKTLSLHKAPV-LESLHLSFEGRTDCLHVGIWIATAFARGVRKLVLDSFY 128
Query: 164 DYCHVARIFSC-----QSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFH 218
+ S SL LKL FP CL +L L+L F
Sbjct: 129 QEDQTVTLPSVLFSYNDSLEILKLKC------AIDLDFPSRVCLK--SLRKLYLDQVHFK 180
Query: 219 GSNNGQVEPFSAFKKLHSLIIRNCTVKNAQTFCISS-----TTLVDVTMRTPFGDFHKIE 273
L L++ + + TF I+S T+ D+ +G+ +
Sbjct: 181 -DEESVCNLLCGCPSLQDLVVHRYSNADVATFTIASPSLQRLTIEDLRQEGGYGNGSYV- 238
Query: 274 LSAPSLQRFDFTG 286
++AP L+ + G
Sbjct: 239 INAPGLKYLNING 251
>AT1G66300.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:24716497-24718050
REVERSE LENGTH=456
Length = 456
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 40/239 (16%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
D + DLP+ ++ H+L + ++ ++ C+LST+W+ LW+ +P L L DF+ F FV
Sbjct: 29 DWVRDLPESLICHVLLNLSTKDVIKNCVLSTKWRYLWRYVPGLDLDCSDFTEYNTFVSFV 88
Query: 114 SKLLELRDGSLPLH---SFDFERHGSIEY--IVHRRVVDYALSHNVQRLAMTVEYDYCHV 168
+ L S FD + G E R ++ + VQ L + E+ +
Sbjct: 89 DRFLSTNTESYLNKFKLGFDCDLVGDEETGNAQMARWINDVVKRKVQHLDL--EWGALEI 146
Query: 169 ARI-FSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQVEP 227
I + C+SL SLKL PI + LP++ + L F +N+ +E
Sbjct: 147 PPIVYVCKSLVSLKLC---------GVILPIPEFVCLPSVKVIVLDWVKF--ANDLALE- 194
Query: 228 FSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGDFHKIELSAPSLQRFDFTG 286
++I C V + T C S+ V V + + + SL F++ G
Sbjct: 195 ---------MLISGCLVLKSLTLCRSNNDNVKV-----------LRVRSQSLLSFNYNG 233
>AT3G49040.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:18177676-18179339 FORWARD LENGTH=415
Length = 415
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 117/251 (46%), Gaps = 27/251 (10%)
Query: 52 NNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTK 111
N DR+S+L + +L+HI+S + + V T +LS RW+ +WK++ +L +S T F++
Sbjct: 9 NEDRISELHEALLVHIMSSLPTKTVVATSVLSKRWRHVWKTVQNLKFVSKYHQT---FSE 65
Query: 112 FVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYDYCHVARI 171
V + L L S D E ++ +V A + +V+ L + ++Y Y + +++
Sbjct: 66 DVYRFFMLHKAPF-LESLDLEFSNQLDASDLGILVGIAFARHVRNLVLDLDY-YSNFSQL 123
Query: 172 FSCQSLTSLKLSVHPKQYNTFSTS------FPISSCLNLPALTSLHLVGFTFHGSNNGQV 225
+ + + L + + K T + FP CL +L LHL F+G ++
Sbjct: 124 CAARFPSGLCIYDNNKTLETLTLKHSILLYFPYRVCLK--SLRKLHLYKVHFYGKDS-VY 180
Query: 226 EPFSAFKKLHSLII---RNCTVKNAQTFCISSTTLVDVTMR-TPFGDFHKIELSAPSLQ- 280
L LI+ R C +TF I+ +L +T+ + FG ++APSL+
Sbjct: 181 NLLCGCPSLRDLIVHRYRECM----ETFTIAVPSLERLTIEDSGFGYGCCYVINAPSLKY 236
Query: 281 ----RFDFTGS 287
RF + S
Sbjct: 237 LNIRRFKYLNS 247
>AT4G22280.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:11776054-11777517 REVERSE LENGTH=415
Length = 415
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 150/325 (46%), Gaps = 34/325 (10%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
DR++ L D ++ HILS + + A T +LS RW+ L+ P+L L + F FV
Sbjct: 2 DRINGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNLCLDDQEVGGGDSFIDFV 61
Query: 114 SKLLELRDGSLPLHSFDFERHGSIEYI-VHRRVVDYALSHNVQRLAMTVEYDYCHV---A 169
++L + G+ P+ + SI+ V R +VD L H V L + + +
Sbjct: 62 DRVL-VVTGNFPIRRISIKCRMSIDTGHVTRWMVD-VLEHGVSYLDIDIISEDDIGFVPL 119
Query: 170 RIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNN---GQVE 226
IF+C++L LKL+ F P ++LP+L +L L F + G++
Sbjct: 120 EIFTCKTLVELKLA------RGFYAMVP--DYVSLPSLKTLFLSSIWFCNRDCCPLGRL- 170
Query: 227 PFSAFKKLHSLIIRNCTVKNAQTFC--ISSTTLVDVTMRTPFG-DFHKIELSAPSLQRFD 283
SA L L I ++ + FC +SS+TL +T+ + F ++ I + PSL +
Sbjct: 171 -LSACPVLEELTIIGGCWQHIE-FCRTVSSSTLKKLTITSSFHYEYWGITIDTPSLAYLE 228
Query: 284 FTGSSPYKRLCGSSLSSVKELSIDAYMGSYSPEPPLVLLSWLEELTNIKSLTVSTN-TLQ 342
++ P + +L S+ E + + S S L+ + L N++ L +S+ T Q
Sbjct: 229 YSDLVP-RHFPFVNLESLVEAKLALDLCSDSNPTNLI-----KGLRNVEVLELSSGYTSQ 282
Query: 343 VLFLIPDLVNRKLPFLSNLKSLKVK 367
+L+ + + P LS L L +K
Sbjct: 283 ILYDFREAI----PVLSKLFRLSIK 303
>AT5G38390.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:15366432-15368053 FORWARD LENGTH=456
Length = 456
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 145/347 (41%), Gaps = 61/347 (17%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
D LS+LP +L HILSF+ + A T +LS RW++L +P++ ++ D L F FV
Sbjct: 2 DLLSNLPYELLCHILSFLTTKEAALTSVLSKRWRNLIAFVPNVDIVDHDIREL--FMDFV 59
Query: 114 SKLLELRDGSLPLHSFDFERHGS--------IEYIVHRRVVDYALSHNVQRLAMTVEYDY 165
++L L+ G+ P++ F + G I+ ++ R V + LS V + E DY
Sbjct: 60 DRVLALQ-GNSPINKFSLDCSGVDSDRVDCWIQNVMVRGVSELNLSIFVDSV---FEDDY 115
Query: 166 CHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQV 225
++F + L L LS Y ++ + + LP L +L L V
Sbjct: 116 NLFPKVFENKKLVKLGLS-----YISW-----LDGSIFLPMLKTLVLESVLL------SV 159
Query: 226 EPFS----AFKKLHSLIIRNCTVK--NAQTFCISSTTLVDVTMRTPFGDFHKIELSAPSL 279
E F A L L++ N K + +SS +L +T+ H + P L
Sbjct: 160 EKFEILLHALPALEELVMNNIYWKERDVVDLIVSSESLKTLTINFIVCT-HTLSFDTPIL 218
Query: 280 QRFDFTG--SSPYKRLCGSSLSSVKELSIDAYMGSYSPEPPLVLLSWLEE---------- 327
++G Y +L + +S+ G S L+ LE+
Sbjct: 219 AYLSYSGYVVDDYAEAKMENLFEAR-ISLLVVEGDISRVRALINNDLLEDDEYDVLQFEN 277
Query: 328 -------LTNIKSLTVSTNTLQVLFLIPDLVNRKLPFLSNLKSLKVK 367
+ NI+ L +S NTL+VL L +P NLKSL +K
Sbjct: 278 VWKLMNGIRNIRCLYLSPNTLEVL----SLCCESMPVFKNLKSLSIK 320
>AT2G26030.3 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr2:11091505-11093000
REVERSE LENGTH=442
Length = 442
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 141/346 (40%), Gaps = 43/346 (12%)
Query: 51 VNNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFT 110
+N DR+ +LPD +L +LS++ ++V+T +LS RW+ LW +P L L DF + +
Sbjct: 1 MNCDRICELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDLKVSDFPD-ENYA 59
Query: 111 KFVSKLLE------LRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYD 164
F+ LE +R L + ++ ++V VD + H A E +
Sbjct: 60 SFIDNFLEFNRKSRMRKFKLKYDEYTYDDDRLAGWVVT--TVDRGIQH---LDAKGFETN 114
Query: 165 YC----HVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGS 220
C I+ C +L SL L + F S LP+L +HL ++
Sbjct: 115 MCVREFMPQNIYKCNTLVSLMLVTVGIENPEFVVS--------LPSLKIMHLEDVWYYDD 166
Query: 221 NNGQVEPFSAFKKLHSLI----IRNCTVKNAQTFCISSTTLVDVTMRTPFG---DFHKIE 273
+ S L + I C + Q + S +L + + + +E
Sbjct: 167 PLIMEKIISGCPVLEDFVLIRPIDFCNLDVLQFLRVRSLSLRSFRLTFEYSVSCTYFSVE 226
Query: 274 LSAPSLQRFDFTGSSPYKRLCGSSLSSVKELSIDAY----MGSYSPEPP-----LVLLSW 324
+ AP L+ +F + +++S+ + ID+ G EP ++ +
Sbjct: 227 IDAPRLEYLNFNDDQS-DTIVVKNMTSLSMIDIDSEFNVKFGGSRLEPGDLRKRDIIRDF 285
Query: 325 LEELTNIKSLTVSTNTLQVLFLIPDLVNRKLPFLSNLKSLKVKVQR 370
L ++ ++ + +S TL+VL LV +P NL L+ V R
Sbjct: 286 LTAISCVRHMIISRRTLEVLDRYSKLV--PIPKFDNLYRLQAAVSR 329
>AT2G26030.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr2:11091505-11093000
REVERSE LENGTH=442
Length = 442
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 141/346 (40%), Gaps = 43/346 (12%)
Query: 51 VNNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFT 110
+N DR+ +LPD +L +LS++ ++V+T +LS RW+ LW +P L L DF + +
Sbjct: 1 MNCDRICELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDLKVSDFPD-ENYA 59
Query: 111 KFVSKLLE------LRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYD 164
F+ LE +R L + ++ ++V VD + H A E +
Sbjct: 60 SFIDNFLEFNRKSRMRKFKLKYDEYTYDDDRLAGWVVT--TVDRGIQH---LDAKGFETN 114
Query: 165 YC----HVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGS 220
C I+ C +L SL L + F S LP+L +HL ++
Sbjct: 115 MCVREFMPQNIYKCNTLVSLMLVTVGIENPEFVVS--------LPSLKIMHLEDVWYYDD 166
Query: 221 NNGQVEPFSAFKKLHSLI----IRNCTVKNAQTFCISSTTLVDVTMRTPFG---DFHKIE 273
+ S L + I C + Q + S +L + + + +E
Sbjct: 167 PLIMEKIISGCPVLEDFVLIRPIDFCNLDVLQFLRVRSLSLRSFRLTFEYSVSCTYFSVE 226
Query: 274 LSAPSLQRFDFTGSSPYKRLCGSSLSSVKELSIDAY----MGSYSPEPP-----LVLLSW 324
+ AP L+ +F + +++S+ + ID+ G EP ++ +
Sbjct: 227 IDAPRLEYLNFNDDQS-DTIVVKNMTSLSMIDIDSEFNVKFGGSRLEPGDLRKRDIIRDF 285
Query: 325 LEELTNIKSLTVSTNTLQVLFLIPDLVNRKLPFLSNLKSLKVKVQR 370
L ++ ++ + +S TL+VL LV +P NL L+ V R
Sbjct: 286 LTAISCVRHMIISRRTLEVLDRYSKLV--PIPKFDNLYRLQAAVSR 329
>AT5G53640.1 | Symbols: | CONTAINS InterPro DOMAIN/s: F-box domain,
cyclin-like (InterPro:IPR001810), FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566),
F-box domain, Skp2-like (InterPro:IPR022364),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is:
F-box/RNI-like/FBD-like domains-containing protein
(TAIR:AT5G53635.1); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
- 339 (source: NCBI BLink). | chr5:21788311-21790690
REVERSE LENGTH=517
Length = 517
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 50 KVNNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIF 109
++ DR+S + +L IL+++ ++ V+T +LSTRW+ LW +PSL L S DFS F
Sbjct: 18 RLKEDRISQFYESLLCQILNYLPTKDVVKTSVLSTRWRSLWLLVPSLELDSRDFSDFNTF 77
Query: 110 TKFVSKLLE----LRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTV--EY 163
F + + L L L + E G + +D A +Q L + ++
Sbjct: 78 VSFCDRYFDSNRVLCINKLKLTISENEEDG----FYLKSWIDAAAKRKIQHLDVQFLPQF 133
Query: 164 DYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHL 212
H ++ C++L SL+L F S + P + ++HL
Sbjct: 134 HKIHF-NLYKCEALVSLRL---------FEVSLDKGRIFSFPCMKTMHL 172
>AT3G49150.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:18218858-18221877 FORWARD LENGTH=630
Length = 630
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 143/337 (42%), Gaps = 34/337 (10%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSL------ILLSPDFSTLK 107
D +SDLP+ ++ HILSF+ ++ T +LS +W+ L+ P+L + L+PD +
Sbjct: 16 DIISDLPEALICHILSFLPIEDSALTSVLSKKWQHLFAFRPNLEFDDAVVYLNPDGERNE 75
Query: 108 -IFTKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAM--TVEYD 164
IF FV ++L L+ G P++ F + R + + V L + V +D
Sbjct: 76 TIFENFVDRVLSLQ-GDYPINKFSLTCRDFTDPTCVSRWISNVMERGVSDLDLRCIVYWD 134
Query: 165 YCHV-ARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNG 223
+ IF ++L L++ + F LP L +L+L S+NG
Sbjct: 135 NGTMPPDIFVSKALVHLRIETGNGAFIDVEDVF-------LPNLKTLYLNKVLLRHSDNG 187
Query: 224 QVEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGDFHKIE-----LSAPS 278
V+ ++ L L I N +SS TL +T D H + P+
Sbjct: 188 FVKLITSCHVLEDLFIMNICWDGYLKRSLSSKTLKRLTFFCE--DVHAVNPESVSFDTPN 245
Query: 279 LQRFDFTG--SSPYKRLCGSSLSSVK-ELSIDAYMGSYSPEPPLV--LLSWLEELTNIKS 333
L F + + YK + SL L + ++ +++ LV +L ++N++
Sbjct: 246 LVYFVYHDCVADKYKNMNFDSLVYASICLQMTSHQRTHASYEHLVGNATDFLLGISNVQI 305
Query: 334 LTVSTNTLQVLFLIPDLVNRKLPFLSNLKSLKVKVQR 370
L + NT++VL ++P NL L +K +
Sbjct: 306 LELFANTIEVL----TFCCEQIPVFKNLVCLIIKTDQ 338
>AT5G15620.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:5082465-5083991 FORWARD LENGTH=440
Length = 440
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 142/322 (44%), Gaps = 56/322 (17%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPD--FSTLKIFTK 111
DR S+LPD V+ HI+SF+ A+ A TC+ K + K+ +L+ + + F + F
Sbjct: 2 DRFSNLPDDVIYHIVSFLSAKEA--TCL-----KFVSKNFQNLVTIKRNVVFHHWESFKN 54
Query: 112 FVSKLL------ELRDGSLPLHSFDFERHGSIE----YIVHRRVVDYALSHNVQRLAMTV 161
FV LL ++ SL L S DF ++ + ++ R V+D L NV+
Sbjct: 55 FVDGLLAEPASYRIKRFSLKLVSMDFAQYNIVNDCLCNVLKRGVLDLELDINVKE----- 109
Query: 162 EYDYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSN 221
DY + +F+C+++ LKL F + L LPAL +L L F+ S+
Sbjct: 110 --DYILPSDVFTCKTVVRLKLGC------GFVIDILPKNAL-LPALKTLILDSVRFYASD 160
Query: 222 N-GQVEPFSAFKKLHSLIIRNCTVKNAQ-TFCISSTTLVDVTMR--------TPFGDFHK 271
SA L L+I ++ + + +SS TL +T+R + DF
Sbjct: 161 GCAFTRLLSASPVLEELVIDRLNWEHWKGSRFVSSPTLKRLTLRRKEWEPEPETWTDFES 220
Query: 272 IELSAPSLQRFDFTGSSPY-------KRLCGSSLSSVKELSIDAYMGSYSPEPPLVLLSW 324
+ PSL + PY + + L+ +E+ D ++ S +P +
Sbjct: 221 VSFDTPSLAYLKYKDVIPYGYPIVNLNSIVEARLTLPREVEYDYWLNR-SADPS----NL 275
Query: 325 LEELTNIKSLTVST-NTLQVLF 345
+ L N++ L++ +T+ +LF
Sbjct: 276 IRGLKNVEILSIKVLHTMDLLF 297
>AT4G22280.2 | Symbols: | F-box/RNI-like superfamily protein |
chr4:11776368-11777517 REVERSE LENGTH=332
Length = 332
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 148/323 (45%), Gaps = 30/323 (9%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
DR++ L D ++ HILS + + A T +LS RW+ L+ P+L L + F FV
Sbjct: 2 DRINGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNLCLDDQEVGGGDSFIDFV 61
Query: 114 SKLLELRDGSLPLHSFDFERHGSIEYI-VHRRVVDYALSHNVQRLAMTVEYDYCHV---A 169
++L + G+ P+ + SI+ V R +VD L H V L + + +
Sbjct: 62 DRVLVV-TGNFPIRRISIKCRMSIDTGHVTRWMVD-VLEHGVSYLDIDIISEDDIGFVPL 119
Query: 170 RIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQV-EPF 228
IF+C++L LKL+ F P ++LP+L +L L F + +
Sbjct: 120 EIFTCKTLVELKLA------RGFYAMVP--DYVSLPSLKTLFLSSIWFCNRDCCPLGRLL 171
Query: 229 SAFKKLHSLIIRNCTVKNAQTFC--ISSTTLVDVTMRTPFG-DFHKIELSAPSLQRFDFT 285
SA L L I ++ + FC +SS+TL +T+ + F ++ I + PSL +++
Sbjct: 172 SACPVLEELTIIGGCWQHIE-FCRTVSSSTLKKLTITSSFHYEYWGITIDTPSLAYLEYS 230
Query: 286 GSSPYKRLCGSSLSSVKELSIDAYMGSYSPEPPLVLLSWLEELTNIKSLTVSTN-TLQVL 344
P + +L S+ E + + S S L+ + L N++ L +S+ T Q+L
Sbjct: 231 DLVP-RHFPFVNLESLVEAKLALDLCSDSNPTNLI-----KGLRNVEVLELSSGYTSQIL 284
Query: 345 FLIPDLVNRKLPFLSNLKSLKVK 367
+ D +P LS L L +K
Sbjct: 285 Y---DF-REAIPVLSKLFRLSIK 303
>AT5G53635.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:21785999-21787444
REVERSE LENGTH=426
Length = 426
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 27/237 (11%)
Query: 56 LSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFVSK 115
+S LPD ++ HILS + ++ V T +LSTRW+ LW LP L L S F F F K
Sbjct: 2 ISQLPDPLICHILSHLPIKDLVTTRVLSTRWRSLWLWLPCLELNSLYFPDFNAFVSFGDK 61
Query: 116 LLE------LRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRL---AMTVEYDYC 166
+ + L ++ +D G + +D A+ +Q L + +Y Y
Sbjct: 62 FFDSNRVSCINKFKLYIYGYDV---GVDDPSYLTSWIDAAVKCKIQHLHVQCLPAKYIYE 118
Query: 167 HVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQVE 226
++ C++L LKL + ++LP L ++HL F N +E
Sbjct: 119 MPLSLYICETLVYLKLC---------RVMLDDAEFVSLPCLKTIHLEYVWF--PNEANLE 167
Query: 227 PF-SAFKKLHSLIIRNCTVKNAQTFCISSTTL--VDVTMRTPFGDFH-KIELSAPSL 279
F S L L I C +NA T + S +L + + + DFH ++ + AP L
Sbjct: 168 RFVSCCPVLEELKIYGCGNENAITLRLLSRSLKKLSINILKSMCDFHSEVVIDAPLL 224
>AT1G13780.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:4724681-4726314
FORWARD LENGTH=456
Length = 456
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 140/326 (42%), Gaps = 52/326 (15%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDF----STLKIF 109
DR+S+LP+ ++ IL + + +V+T +LSTRWK+LW ++P L L DF + K+
Sbjct: 10 DRISELPESLISQILLHLPTKASVKTSVLSTRWKNLWLNVPGLDLNCRDFPFQNNNEKLL 69
Query: 110 TKFVSKLLELRDGS-LPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVE------ 162
F+ + L+ + S L D+ R I++ R+ D A+S ++ L +
Sbjct: 70 IDFIDRFLQFNNESRLQKFKVDYSRDKIIKF--SDRIGD-AISRGIRVLDVESNTYYRDA 126
Query: 163 ---YDYCHVA----RIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGF 215
DY + ++SC++L SLKLS + F + LP L +HL
Sbjct: 127 DDCIDYPCIEFMPLNLYSCKTLVSLKLSYSGLEDPGF---------VYLPCLKFMHLREV 177
Query: 216 TFHGSNNGQVEP-------FSAFKKLHS--LIIRNCTVKNAQTFCISSTTLVDVTMRTPF 266
+ S +E LH L++ ++ + F I + + R
Sbjct: 178 RWDSSGTMNLEKLVSGCPVLEELIYLHDDKLVVTRVRSRSLKRFSIPFRHKLSLFRRVT- 236
Query: 267 GDFHKIELSAPSLQRFDFTGSSPYKRLCGSSLSSVKELSID-----AYMGSYSPE---PP 318
E+ AP L+ + R+ +L+S+ + +D + + PE
Sbjct: 237 ---QTFEIDAPGLEYMSLKADH-FDRIVVKNLTSLFMIDLDIKFIVGFGWMFDPEDLPKR 292
Query: 319 LVLLSWLEELTNIKSLTVSTNTLQVL 344
+ +L +++++ + +S NT++ L
Sbjct: 293 NEIRDFLTGISSVRHMVISHNTVKAL 318
>AT5G44940.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:18149369-18150892 FORWARD LENGTH=377
Length = 377
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 21/179 (11%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTL-----KI 108
D +S+ PDC+L IL + +++V+T +LS RW++LW ++P L L + DF +
Sbjct: 5 DYISEFPDCLLTQILLNLPTKDSVKTSVLSKRWRNLWLNVPGLRLRTFDFPVFPYPYEEG 64
Query: 109 FTKFVSKLLELRDGSLPLHSF---DFERHGSIEYIVH--RRVVDYALSHNVQRLAMTVEY 163
F +F+ + +E + S L F FE +G + ++ +VD + H +
Sbjct: 65 FVRFMDRFMEFKCRS-RLQKFMITYFEHNGYRDRLMELIGTLVDRGIQHLYVYMHTCNRV 123
Query: 164 DYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNN 222
D+ I+ ++L SLKL + F S P CL + L ++ FHG +
Sbjct: 124 DFIR-QNIYKSKTLVSLKLYNVELKNPEFVVSLP---CLKILKLENI------FHGEDG 172
>AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 109/247 (44%), Gaps = 30/247 (12%)
Query: 53 NDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLIL-LSPDFSTLKIFTK 111
DRLS LPD LL ILS++ ++ + T +LS RW+ LW +P L L +T F++
Sbjct: 5 RDRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYDLRLHDNTCPRFSQ 64
Query: 112 FVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYDYCHVAR- 170
FV + L L L S + + GSI + + V + + V R + YC
Sbjct: 65 FVDRSLLLHKAP-TLESLNI-KIGSICFTAEKDVGVW-VRIGVDRFVRELSVSYCSGEEP 121
Query: 171 ------IFSCQSLTSLKLSVHPKQYNTFSTSFPISSC-LNLPALTSLHLVGFTFHGSNNG 223
+F+C +L LKL + + +SC + +L +LHL+ + +
Sbjct: 122 IRLPKCLFTCSTLAVLKLE---------NITLEDASCYVCFQSLKTLHLLDVKYL---DD 169
Query: 224 QVEP--FSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPF----GDFHKIELSAP 277
Q P S+ L L+++ C N + +++ +L +++ GD + P
Sbjct: 170 QSLPRIISSCSSLEDLVVQRCPGDNVKVVTVTAPSLKTLSLHKSSQAFEGDDDGFLIDTP 229
Query: 278 SLQRFDF 284
L+R D
Sbjct: 230 KLKRVDI 236
>AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 109/247 (44%), Gaps = 30/247 (12%)
Query: 53 NDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLIL-LSPDFSTLKIFTK 111
DRLS LPD LL ILS++ ++ + T +LS RW+ LW +P L L +T F++
Sbjct: 5 RDRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYDLRLHDNTCPRFSQ 64
Query: 112 FVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYDYCHVAR- 170
FV + L L L S + + GSI + + V + + V R + YC
Sbjct: 65 FVDRSLLLHKAP-TLESLNI-KIGSICFTAEKDVGVW-VRIGVDRFVRELSVSYCSGEEP 121
Query: 171 ------IFSCQSLTSLKLSVHPKQYNTFSTSFPISSC-LNLPALTSLHLVGFTFHGSNNG 223
+F+C +L LKL + + +SC + +L +LHL+ + +
Sbjct: 122 IRLPKCLFTCSTLAVLKLE---------NITLEDASCYVCFQSLKTLHLLDVKYL---DD 169
Query: 224 QVEP--FSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPF----GDFHKIELSAP 277
Q P S+ L L+++ C N + +++ +L +++ GD + P
Sbjct: 170 QSLPRIISSCSSLEDLVVQRCPGDNVKVVTVTAPSLKTLSLHKSSQAFEGDDDGFLIDTP 229
Query: 278 SLQRFDF 284
L+R D
Sbjct: 230 KLKRVDI 236
>AT5G27750.1 | Symbols: | F-box/FBD-like domains containing protein
| chr5:9828430-9829981 FORWARD LENGTH=459
Length = 459
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 32/178 (17%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDF-----STLKI 108
DR+S+LP+ ++ IL + +++V+T +LSTRWK+LW ++P L L DF ++
Sbjct: 5 DRISELPESLITQILLCLPTKDSVKTSVLSTRWKNLWLNVPGLDLTCSDFPFEDEEYEQV 64
Query: 109 FTKFVSKLLELR-DGSLPLHSFDFERH------GSIEYIVHR--RVVDYALSHNVQRLAM 159
F F+ + LE + L D++R I ++R R++D A+S +
Sbjct: 65 FINFIDRFLEFNPESRLQTFEVDYKRREIRGFKDRIGTAINRGIRLLD-AVSSTMYWEEE 123
Query: 160 TVEYDYCHVA--RIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGF 215
+ Y Y +F+ ++L +LKL S LN P L S+ + F
Sbjct: 124 CIMYPYLEFMPLNLFTSKTLVTLKLR---------------DSALNDPGLLSMPCLKF 166
>AT1G60410.1 | Symbols: | F-box family protein |
chr1:22259129-22260526 FORWARD LENGTH=406
Length = 406
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 109/263 (41%), Gaps = 49/263 (18%)
Query: 52 NNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTK 111
DRLSDLP +L ILS + + +V+T +LS RW +LW + L L DF +
Sbjct: 8 GKDRLSDLPCHLLCRILSNLSTKESVRTSVLSPRWSNLWSLVSVLDLDFQDFKGEHDMGE 67
Query: 112 FVSKLLELRDG-SLPLHSF----DFERH------GSIEYIVHRRVVDYALSHNVQRLAMT 160
F+ +E + L L SF D H + +V R V D N+Q +
Sbjct: 68 FIDSFMEYHEELGLKLKSFNMFYDANEHLHEPFVRRLNKVVRRGVCDL----NIQNM--- 120
Query: 161 VEYDYCHV---ARIFSCQSLTSLKLSVHPKQYNTFSTSF--PISSCLNLPALTSLHLVGF 215
V+ D V ++SC +L +L L + F P S ++LP++ ++ G
Sbjct: 121 VDVDVALVRMPPSLYSCATLVNLIL---------YCVVFDHPRSKSVSLPSVKKMYFEGV 171
Query: 216 TFHGSNNGQVEPFSAFKKL--HSLIIRNCTV-----KNAQTFCISSTTLVDVTMRTPF-- 266
F G S + L HS ++ TV + C+ S +L + +
Sbjct: 172 KFDGD--------SVLETLISHSPVLEELTVIPHPEDYLEVICVRSQSLESFRLESKRFE 223
Query: 267 GDFHKIELSAPSLQRFDFTGSSP 289
D K+E+ +PSL+ P
Sbjct: 224 CDNPKVEIDSPSLEFMSICDKKP 246
>AT5G22700.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:7545653-7547307
REVERSE LENGTH=437
Length = 437
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 53 NDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKF 112
DR+S LPD +L ILS + +NAV T ILSTRW+ +W S P L + F F F
Sbjct: 5 GDRISSLPDELLCQILSNLPTKNAVTTSILSTRWRSIWLSTPVLDIDIDAFDDATTFVSF 64
Query: 113 VSKLLELRDGSLPLHSFDFE-RHGSIEYIVHRRVVDYALSHNVQRLAMTVEYDYCHVA-- 169
S+ LE S LH F ++ + A++ +Q L + + + A
Sbjct: 65 ASRFLEFSKDSC-LHKFKLSVERDDVDMCTIMPWIQDAVNRRIQHLEVDCRFSFHFEAVY 123
Query: 170 -RIFSCQSLTSLKL---SVHPKQYNTFSTSFPISSCLNLPALTSLHL 212
++ ++L SL+L ++H ++ ++LP L +HL
Sbjct: 124 LTLYLSETLVSLRLHFVTLHRYEF------------VSLPNLKVMHL 158
>AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:15449279-15450601 REVERSE LENGTH=379
Length = 379
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 8/110 (7%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
D ++ LPD +L+ ILSFV AV TC+LS RW+ LW LP+L +SP + + F+
Sbjct: 2 DNINGLPDDLLVKILSFVPTYVAVSTCVLSKRWEFLWMWLPNLEFVSP-WDSRPGIVDFI 60
Query: 114 SKLLELRDG----SLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAM 159
+K L + L +H + H EYI +R ++ A+SH V+ L +
Sbjct: 61 NKKLPIHRAPVIERLCIH-INSNPHIKPEYI--KRWIEIAVSHYVRELQI 107
>AT1G55030.1 | Symbols: | RNI-like superfamily protein |
chr1:20530417-20531768 REVERSE LENGTH=422
Length = 422
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 117/267 (43%), Gaps = 34/267 (12%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
D +S LP+ ++L IL + + A+ T +LS +W+ WK +P L F F+
Sbjct: 9 DMISQLPEPLILQILGSLPTKVAITTSVLSKQWQSHWKMMPKL-----------EFDSFL 57
Query: 114 SKL-LELRDGSLPLHSFDFERHGSIEYIVHRR--------VVDYALSHNVQRLAMTVEYD 164
+L LE L H + S++ + RR ++ A++ NV++L + V +
Sbjct: 58 RRLDLENVTKCLLSHKAPVLQTFSLKVRLDRRNNAVDIGCLIGIAMTRNVRKLVLEVYFH 117
Query: 165 ---YCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSN 221
+ ++ C++L +L+L + + + L +L +L+L+ F +
Sbjct: 118 RGTFTFPRSLYHCETLETLEL--------ILNVVMDVPPSVYLKSLKTLYLLAVDFK-DD 168
Query: 222 NGQVEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFG--DFHKIELSAPSL 279
+ S L L++R + N +TF I+ +L + + G ++ PSL
Sbjct: 169 ESVINLLSGCPNLQDLVMRRNSSSNVKTFTIAVPSLQRLAIHNGSGTPQHCGYTINTPSL 228
Query: 280 QRFDFTGSSPYKRLCGSSLSSVKELSI 306
+ GS ++ ++S + E++I
Sbjct: 229 KYLKLEGSKAFESFMVENVSELIEVNI 255
>AT4G26350.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:13326853-13328315
FORWARD LENGTH=431
Length = 431
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 23/178 (12%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKI-FTKF 112
D +S PD +LL ILSF+ ++ + T +LS RW LW+ +P L DF+ + F KF
Sbjct: 2 DIISQCPDHLLLRILSFIPTKDVIVTSLLSKRWGSLWRWVPK---LEYDFTRQNMRFVKF 58
Query: 113 VSKLLELRDGSLPLHSFDFERHGSIEYIVHRRV-----VDYALSHNVQRLAMTV---EYD 164
V + L L++ + L S + I Y R V +D A+S V+ L +++ +
Sbjct: 59 VYRSL-LQNNAPVLESLHLK--NIILYAECRTVDIGGWIDIAVSRRVRELEISINCSDEK 115
Query: 165 YCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHL--VGFTFHGS 220
+ + +++C +L S L++ + P++ C LP+L LHL +G+ ++ +
Sbjct: 116 FRLPSSLYTCGTLESFILTIK----HCHLVDVPLAVC--LPSLKKLHLRCIGWAYNAT 167
>AT3G59190.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21884740-21886101 FORWARD LENGTH=388
Length = 388
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 117/259 (45%), Gaps = 34/259 (13%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKI----- 108
D +S+LPD +L H+LSF+ A T +L+ RW+ L +P+L L + + K+
Sbjct: 12 DIISNLPDALLCHVLSFLPTTEAASTSVLAKRWRFLLAFVPNLDLDNMIYDRPKMGRRKR 71
Query: 109 ------FTKFVSKLLELRDGSLPLHSFDFE-RHGSIEYIVHRRVVDYALSHNVQRLAMTV 161
F FV +++ L+ G+ PL F + GS V+ V+ L V+ L + +
Sbjct: 72 LELRKSFKLFVDRVMALQ-GNAPLKKFSLRCKIGSDPSRVNGWVLK-VLDRGVEELDLYI 129
Query: 162 --EYDYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHG 219
EY+Y ++ ++L SLK+S + F LP L +LHL +F G
Sbjct: 130 ASEYEYPLPPKVLMTKTLVSLKVSGTDEFTIDVGEFF-------LPKLKTLHLSAISF-G 181
Query: 220 SNNGQVEPF----SAFKKLHSLIIRNCTVKNAQTFC-ISSTTLVDVTMRTPFGDFH--KI 272
G PF SA L L++ + + FC +SS +L V++ D + +
Sbjct: 182 DEGGP--PFAKLISACHALEELVMIK-MMWDYWEFCSVSSPSLKRVSIDCENIDENPKSV 238
Query: 273 ELSAPSLQRFDFTGSSPYK 291
P+L +FT + K
Sbjct: 239 SFDTPNLVYLEFTDTVAVK 257
>AT1G56610.2 | Symbols: | Protein with RNI-like/FBD-like domains |
chr1:21212378-21213960 FORWARD LENGTH=472
Length = 472
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 55 RLSDLPDCVLLHILSFVKARNAVQTCILSTR--WKDLWKSLPSLILLSPDFSTLKIFTKF 112
L DLP C+ HILS++ + AV +L + W+ K+L SL D + F +F
Sbjct: 11 ELCDLPKCLAPHILSWLPTKTAVTVSLLFMKGWWRSEMKNLSSLKFSFSDDQEEEHFVRF 70
Query: 113 VSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYD----YCHV 168
V ++L R G+ L SF + I+ +VDY L + V++L +++ YD +
Sbjct: 71 VDQVLRQR-GNRKLDSFSLTLNDEIDGGFVTHLVDYPLDNGVEKLKLSI-YDIKGNFQLS 128
Query: 169 ARIFSCQSLTSLKLS 183
+R+FS +L +LKL+
Sbjct: 129 SRVFSQATLVTLKLA 143
>AT5G25850.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:9014082-9015917
FORWARD LENGTH=481
Length = 481
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 18/164 (10%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
+RLS L D ++ ILS + + V T +LSTRWK++W S+PSL L+ F F F
Sbjct: 20 NRLSQLSDPLICQILSHLPIKEVVTTSVLSTRWKNIWLSVPSLELIYSIFPNFNTFRSFG 79
Query: 114 SKLLELRDGSLPLHSFD--FERHGSIEYIVHRRVVDYALSHNVQRLAM-TVEYDYCHV-- 168
+ + S +H+ F+ H + Y+ ++ ++ N++RL + V +Y H
Sbjct: 80 DRFFDSTRVSC-IHNLKLYFDEHDAC-YLTSW--INAFVTRNIRRLYVRRVRGNYFHELP 135
Query: 169 ARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHL 212
++ C++L SLKL F + ++LP L +HL
Sbjct: 136 LSLYVCETLVSLKL---------FHLTLVDPEFVSLPCLKIMHL 170
>AT1G56610.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr1:21212189-21213960 FORWARD LENGTH=535
Length = 535
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 50 KVNNDRLSDLPDCVLLHILSFVKARNAVQTCILSTR--WKDLWKSLPSLILLSPDFSTLK 107
K L DLP C+ HILS++ + AV +L + W+ K+L SL D +
Sbjct: 69 KKKKTELCDLPKCLAPHILSWLPTKTAVTVSLLFMKGWWRSEMKNLSSLKFSFSDDQEEE 128
Query: 108 IFTKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYD--- 164
F +FV ++L R G+ L SF + I+ +VDY L + V++L +++ YD
Sbjct: 129 HFVRFVDQVLRQR-GNRKLDSFSLTLNDEIDGGFVTHLVDYPLDNGVEKLKLSI-YDIKG 186
Query: 165 -YCHVARIFSCQSLTSLKLS 183
+ +R+FS +L +LKL+
Sbjct: 187 NFQLSSRVFSQATLVTLKLA 206
>AT5G53840.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:21859148-21860672
REVERSE LENGTH=444
Length = 444
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 100/233 (42%), Gaps = 20/233 (8%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
+RLS LPD ++ ILS + ++AV+T ILSTRW++LW+ +P L S + + F F
Sbjct: 18 ERLSQLPDHLICVILSHLSTKDAVRTSILSTRWRNLWQLVPVLDFDSRELRSFSEFVSFA 77
Query: 114 SKLLELRDGSL--PLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYDYCHVARI 171
L S L ++ G+ Y+ +D H +Q + ++V + I
Sbjct: 78 GSFFYLHKDSYIQKLRVCIYDLAGNY-YLTSW--IDLVTRHRIQHIDISV-FTCSGFGVI 133
Query: 172 ----FSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQVEP 227
++C +L LKLS N S P CL + L V FT + + +
Sbjct: 134 PLSLYTCDTLVHLKLS-RVTMVNVEFVSLP---CLK---ILDLDFVNFTNETTLDKII-- 184
Query: 228 FSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGDFHKIELSAPSLQ 280
S L L I + N + + S TL V + F + + + P LQ
Sbjct: 185 -SCSPVLEELTIVKSSEDNVKIIQVRSQTLKRVEIHRRFDRHNGLVIDTPLLQ 236
>AT4G13960.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8060681-8062231 REVERSE LENGTH=434
Length = 434
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 141/346 (40%), Gaps = 78/346 (22%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSL-----ILLSPD------ 102
D +S LPD VL HILSF+ + A T ILS RW++L+ +P+L + L P
Sbjct: 2 DHVSSLPDEVLYHILSFLTTKEAALTSILSKRWRNLFTFVPNLDIDDSVFLHPQEGKEDR 61
Query: 103 FSTLKIFTKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVE 162
+ K F KFV ++L L+ G+ P+ + + HR VD +S+ + R ++
Sbjct: 62 YEIQKSFMKFVDRVLALQ-GNSPIKKLSLKLRTGFDS--HR--VDGWISNALARGVTELD 116
Query: 163 YDYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTS--LHLVGFTFHGS 220
+ +L +LKL N+ + + + LP L + LH V
Sbjct: 117 --------LLIILNLVTLKL-------NSVRVDWLAAGDIFLPMLKTLVLHSVRLCVDNV 161
Query: 221 NNGQVEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGDFHKIELSAPSLQ 280
N G ++ V NA S ++ V G F + PSL
Sbjct: 162 NWGG---------------KDVNVSNA------SLKILTVNYNICLGTF---SVDTPSLV 197
Query: 281 RFDFTG--SSPYKRLCGSSLSSVK---ELSIDAYMGSYSPEPPLVLLSWLEE-----LTN 330
F FT + Y + +L + ++ D + +P + W+E+ L N
Sbjct: 198 YFCFTEYVAIDYPVVIMQNLFEARISLLVTQDQIERARAPN-----IDWVEDDVVLRLVN 252
Query: 331 IKSLTVSTNTLQVLFLIPD------LVNRKLPFLSNLKSLKVKVQR 370
++ L +Q ++L P+ L +P +NLKSL +K +
Sbjct: 253 MEKLIKGIRNVQYMYLSPNTLEVLSLCCESMPVFNNLKSLTLKSHK 298
>AT5G38590.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:15452586-15453455
REVERSE LENGTH=289
Length = 289
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 141/319 (44%), Gaps = 52/319 (16%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
D+++ LPD +L+ ILS+V AV T ILS RW+ LW LP+L D+++
Sbjct: 2 DKINGLPDDLLVKILSYVPTDIAVSTSILSKRWEFLWMWLPNL-----DYTSRWCRKPGD 56
Query: 114 SKLLELRDGSLPLH------SFDFERHG-SIEYIVHRRVVDYALSHNVQRLAMT--VEYD 164
L + +LPLH S F + I+ RR ++ A+S +V L + E +
Sbjct: 57 VGLRDFIHKNLPLHRAPVIESLRFHSNSPDIKPEDIRRWIEIAVSRHVHDLDIDHFSENE 116
Query: 165 YCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQ 224
++ F+C+SL +LKL T I S + LP+L +L L +F + Q
Sbjct: 117 NIFLSSFFACKSLVTLKLRS--------VTLRDIPSMVCLPSLKTLLLDNVSFVEGKSLQ 168
Query: 225 VEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTP---FGDFHKIELSAPSLQR 281
E S L L + +N + I +L+ +++ P D + I+ PSL+
Sbjct: 169 -ELLSICPVLEDLSVYCDDYENTKELTIVVPSLLSLSLYIPDEWLLDGYWID--TPSLEY 225
Query: 282 FDFTGSSPYKRLC-GSSLSSVKELSIDAYMGSYSPEPPLVLLSWLEELTNIKSLTVSTNT 340
+ L ++ ++E +DA + P+ S +E +T++K LT+ +
Sbjct: 226 LKLEDWNSCDHLSLIKNMPKLREAYVDA--KCFLPK------SVIESITSVKHLTICS-- 275
Query: 341 LQVLFLIPDLVNRKLPFLS 359
K+PFLS
Sbjct: 276 -------------KVPFLS 281
>AT5G38590.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:15452066-15453455
REVERSE LENGTH=410
Length = 410
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 135/298 (45%), Gaps = 37/298 (12%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
D+++ LPD +L+ ILS+V AV T ILS RW+ LW LP+L D+++
Sbjct: 2 DKINGLPDDLLVKILSYVPTDIAVSTSILSKRWEFLWMWLPNL-----DYTSRWCRKPGD 56
Query: 114 SKLLELRDGSLPLH------SFDFERHG-SIEYIVHRRVVDYALSHNVQRLAMT--VEYD 164
L + +LPLH S F + I+ RR ++ A+S +V L + E +
Sbjct: 57 VGLRDFIHKNLPLHRAPVIESLRFHSNSPDIKPEDIRRWIEIAVSRHVHDLDIDHFSENE 116
Query: 165 YCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQ 224
++ F+C+SL +LKL T I S + LP+L +L L +F + Q
Sbjct: 117 NIFLSSFFACKSLVTLKLRS--------VTLRDIPSMVCLPSLKTLLLDNVSFVEGKSLQ 168
Query: 225 VEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTP---FGDFHKIELSAPSLQR 281
E S L L + +N + I +L+ +++ P D + I+ PSL+
Sbjct: 169 -ELLSICPVLEDLSVYCDDYENTKELTIVVPSLLSLSLYIPDEWLLDGYWID--TPSLEY 225
Query: 282 FDFTGSSPYKRLC-GSSLSSVKELSIDAYMGSYSPEPPLVLLSWLEELTNIKSLTVST 338
+ L ++ ++E +DA + P+ S +E +T++K LT+ +
Sbjct: 226 LKLEDWNSCDHLSLIKNMPKLREAYVDA--KCFLPK------SVIESITSVKHLTICS 275
>AT5G44980.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:18160600-18162058
FORWARD LENGTH=435
Length = 435
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 118/256 (46%), Gaps = 46/256 (17%)
Query: 51 VNNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFS---TLK 107
++ D +S+LPD +L IL ++ +++V+T +LS RW++LW ++P L L + F+ +
Sbjct: 1 MDRDYISELPDSLLTQILLELRTKDSVKTSVLSKRWRNLWLNVPGLELFTLQFTYPDREE 60
Query: 108 IFTKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHR-------RVVDYALSHNVQRLAMT 160
IF +F+ + +E + S L F I Y+ + ++ + H +Q L +
Sbjct: 61 IFVRFMDRFMEFKCRS-RLKKF------MITYVDCKGYRDRLMELIGTLVDHGLQHLYVF 113
Query: 161 VE-YDYCHVAR--IFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTF 217
+ +D R I+ ++L SLKL + + F S P CL + L ++
Sbjct: 114 MHTFDRVDFKRQNIYKSKTLVSLKLHNVELKNSDFVVSLP---CLKILKLENI------C 164
Query: 218 HGSNNGQV--EPFSAFKKLHSL-IIRNCTVKNAQTFC---ISSTTLVDVTM-------RT 264
HG + V + S L L +IR ++ + +SS TL T+ RT
Sbjct: 165 HGEDGPLVVEKLISGCSVLEDLELIRPFDIRTHKVLLLLRVSSQTLKSFTLHFAIYKDRT 224
Query: 265 PFGDFHKIELSAPSLQ 280
F +E+ AP L+
Sbjct: 225 DFS----VEIDAPRLK 236
>AT3G58930.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21778381-21780014 REVERSE LENGTH=482
Length = 482
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDF--------ST 105
DR+S+LPD V HILSF+ A++ T +LS W +LWK +P L + +F
Sbjct: 2 DRVSNLPDGVRGHILSFLPAKHIALTSVLSKSWLNLWKLIPILDIDDSEFLHPEEGKAER 61
Query: 106 LKI---FTKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVE 162
L+I F FV ++L L+D S P+ F + I R + L V L + ++
Sbjct: 62 LEIRQSFVDFVDRVLALQDDS-PIDRFSLKCITGIHPDHVNRWICNVLQRGVSDLDLFID 120
Query: 163 YDY 165
+ Y
Sbjct: 121 FSY 123
>AT3G42770.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:14867122-14870083
FORWARD LENGTH=532
Length = 532
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 150/336 (44%), Gaps = 55/336 (16%)
Query: 59 LPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLP------SLILLSPD-----FSTLK 107
LPD +L+ ILSF+ + A T +LS RW+ L+ P SL+L S + K
Sbjct: 4 LPDELLVQILSFLPTKEATSTSLLSKRWRTLFTLSPNLDFDNSLLLQSKKRKWNMRNIQK 63
Query: 108 IFTKFVSKLLELRDGSLPLHSFDF---ERHGSI--EYIVHRRVVDYALSHNVQRLAMTVE 162
F FV L L+ G + SF E G + E V+R + + AL H V L + ++
Sbjct: 64 SFVGFVDSTLALQGGK-GIKSFSLKFKETLGDVNGEVDVNRWICN-ALEHGVSELHLRID 121
Query: 163 Y-DYCHV-ARIFSCQSLTSLKLSVHPKQYNTFSTSFP-ISSCLNLPALTSLHLVGFTFHG 219
Y CH+ + IF+ L L L + FP + +C++LP+L L L F
Sbjct: 122 YTKRCHLPSEIFTSTKLVKLSLVTQ--------SCFPVVPNCISLPSLKVLFLDSIWFEV 173
Query: 220 -------SNNGQVEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGDFHKI 272
+ +E + ++K HS+ + ISS T+ +++ G F
Sbjct: 174 PQFLIFLTACPALEDLTIYQKPHSV---------GMPYHISSKTIKRLSVTYTCGYFVDY 224
Query: 273 EL---SAPSLQRFDFTGSSPYKRLCGSSLSSVKELSIDAYMGSYSPEPPLVLLSWLEELT 329
L + PS+ ++ +K +L S+ + ++D + + LLS +
Sbjct: 225 GLKLFNTPSVVDLYYSDYVRHKY-PHMNLDSLPKATLDIHFLDDNAANVTELLSGIR--- 280
Query: 330 NIKSLTVSTNTLQVLFLIPDLVNRKLPFLSNLKSLK 365
N+K+L ++++T++V+ L ++P NL +LK
Sbjct: 281 NVKTLHLTSSTVKVILLC---CKGEIPMFENLINLK 313
>AT1G55660.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr1:20800694-20802340
FORWARD LENGTH=492
Length = 492
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 47/249 (18%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTL--KIFTK 111
D++S LPD +L+ +LSF+ ++AV T ILS RWK LW LP L +S + +
Sbjct: 53 DKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLEYNFRHYSVSEGQGLAR 112
Query: 112 FVSKLLELRDG-SLPLHSFDFERHGSIEYIVHRRV---VDYALS-HNVQRLAMTVEYDYC 166
F++ L + ++ S F R+G+I I + + V A+ NV+ L++ + +++
Sbjct: 113 FITSSLRVHKAPAIESLSLKF-RYGAIGSIKPKDIYLWVSLAVHVSNVRELSLKL-FNFA 170
Query: 167 HV-----ARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSN 221
+ + C+S+ LKL + P C LP+L +L L T+ +N
Sbjct: 171 ELPTKLPKSLCKCKSIVILKLK------DEILVDVPRKVC--LPSLKTLFLGRVTYSDAN 222
Query: 222 NGQVEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTM-RTPFGDFHKIELSAPSLQ 280
+ LH L + NC V L D+ M R + K+ + SLQ
Sbjct: 223 S-----------LHRL-LSNCPV------------LEDLVMERDKIDNLGKLSVIVKSLQ 258
Query: 281 RFDFTGSSP 289
R S P
Sbjct: 259 RLTLKMSRP 267
>AT3G58860.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21763742-21765306 REVERSE LENGTH=457
Length = 457
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 100/245 (40%), Gaps = 26/245 (10%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDF---------- 103
D S LPD V+ HILS + + A T +L+ +W+ L+ +PSL DF
Sbjct: 7 DLFSKLPDEVISHILSSLPTKEAASTSVLAKKWRYLFAFVPSLDFNDSDFLHPQEGKREK 66
Query: 104 -STLKIFTKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLA--MT 160
L+ F FV ++L L+ G+ P+ F ++ R + L V LA M
Sbjct: 67 DGILRSFMDFVDRVLALQ-GASPIKKFSLNVKTGVDPDRVDRWICNVLQRGVSHLALFMD 125
Query: 161 VEYDYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGS 220
E +Y I ++L LK Y F LP L +L L F
Sbjct: 126 FEEEYSLPYEISVSKTLVELKTGYGVDLYLWDDDMF-------LPMLKTLVLESVEF--- 175
Query: 221 NNGQVEP-FSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGDFHKIELSAPSL 279
GQ + A L L++ N K+ + +SS++L ++ + + G + P+L
Sbjct: 176 GRGQFQTLLPACPVLEELMLLNMEWKD-RNVILSSSSLKNLKITSEDGCLGTLSFDTPNL 234
Query: 280 QRFDF 284
D+
Sbjct: 235 VFLDY 239
>AT1G55660.2 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr1:20800694-20801788
FORWARD LENGTH=364
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 111/252 (44%), Gaps = 53/252 (21%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKI----- 108
D++S LPD +L+ +LSF+ ++AV T ILS RWK LW LP L +F +
Sbjct: 53 DKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPK---LEYNFRHYSVSEGQG 109
Query: 109 FTKFVSKLLELRDG-SLPLHSFDFERHGSIEYIVHRRV---VDYALS-HNVQRLAMTVEY 163
+F++ L + ++ S F R+G+I I + + V A+ NV+ L++ + +
Sbjct: 110 LARFITSSLRVHKAPAIESLSLKF-RYGAIGSIKPKDIYLWVSLAVHVSNVRELSLKL-F 167
Query: 164 DYCHV-----ARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFH 218
++ + + C+S+ LKL + P C LP+L +L L T+
Sbjct: 168 NFAELPTKLPKSLCKCKSIVILKLK------DEILVDVPRKVC--LPSLKTLFLGRVTYS 219
Query: 219 GSNNGQVEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTM-RTPFGDFHKIELSAP 277
+N+ LH L + NC V L D+ M R + K+ +
Sbjct: 220 DANS-----------LHRL-LSNCPV------------LEDLVMERDKIDNLGKLSVIVK 255
Query: 278 SLQRFDFTGSSP 289
SLQR S P
Sbjct: 256 SLQRLTLKMSRP 267
>AT1G51370.3 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:19045615-19047141
FORWARD LENGTH=413
Length = 413
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 122/298 (40%), Gaps = 22/298 (7%)
Query: 52 NNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTK 111
DR+S LP+ ++ IL + +++V+T LST+W+ LW+S+P L L S
Sbjct: 17 EEDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSVPGLDLDPYASSNTNTIVS 76
Query: 112 FVSKLLE-LRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYDYCHVAR 170
FV + RD + D H ++ +D A + +Q L + +D
Sbjct: 77 FVESFFDSHRDSWIRKLRLDLGYHHDKYDLMSW--IDAATTRRIQHLDVHCFHDNKIPLS 134
Query: 171 IFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQVEPFSA 230
I++C +L L+L F ++LP L +H ++ Q + S
Sbjct: 135 IYTCTTLVHLRLRWAVLTNPEF---------VSLPCLKIMHFENVSYPNETTLQ-KLISG 184
Query: 231 FKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGDFHKIELSAPSLQ--RFDFTGSS 288
L LI+ + + S TL R +F + + AP LQ R +
Sbjct: 185 SPVLEELILFSTMYPKGNVLQLRSDTL----KRLDINEFIDVVIYAPLLQCLRAKMYSTK 240
Query: 289 PYKRLCGSSLSSVKELSIDAYMGSYSPEPPLVLLSWLEELTNIKSLTVSTNTLQVLFL 346
++ + S + ++ G Y + V+ L +++ ++ L +S+NT + FL
Sbjct: 241 NFQ-IISSGFPAKLDIDFVNTGGRYQKKK--VIEDILIDISRVRDLVISSNTWKEFFL 295
>AT5G41840.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:16754436-16756263 REVERSE LENGTH=540
Length = 540
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 91/216 (42%), Gaps = 37/216 (17%)
Query: 51 VNNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSL-----ILLSPDFST 105
V+ DR+S LPD ++ HILSF+ + A T +L+ RWK L +P+L I P
Sbjct: 11 VSGDRISGLPDALICHILSFLPTKEAASTTVLAKRWKPLLAFVPNLNFDDSIYFHPRARR 70
Query: 106 LKI------FTKFVSKLLELRDGS-LPLHSFDFERHGSIEYIVHRRVVDYALSHNVQR-- 156
K F FV +L L+ + PL F H E +V + V + ++R
Sbjct: 71 NKYSKSYESFMSFVDSVLALQAKTKTPLKRF----HVKCEDVVDQSWVLEWIPKVLKRGV 126
Query: 157 ----LAMTVEYDYCHV-------ARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLP 205
L +T +YC ++IF ++L LK+ + ++LP
Sbjct: 127 LDIDLHITSSRNYCENSSFYSLPSKIFVSKTLVRLKIQFQD------GVHIDVEGGVSLP 180
Query: 206 ALTSLHLVGFTFHGSNNGQVEPFSAFKKLHSLIIRN 241
L +LHL F S ++ S L L++ N
Sbjct: 181 KLKTLHLDYFKIETSMLNKL--LSGCHALEELVLAN 214
>AT5G02920.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:680541-681317 FORWARD LENGTH=258
Length = 258
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 50 KVNNDRLSDLPDCVLLHILSFVKARN-AVQTCILSTRWKDLWKSLPSLILLSPDFSTLKI 108
+ ++D +S+LPD +L HILSF+ N ++T +LS RW+ +W P L F L +
Sbjct: 24 RRSSDSISNLPDEILHHILSFIPETNLVIRTSVLSKRWRHVWSKTPHL-----SFEWLMV 78
Query: 109 FTKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMT 160
K ++K L S + SF S E +++A+SHNV L++
Sbjct: 79 SPKLINKTLASYTAS-KITSFHLCTSYSYEAGHVHSSIEFAMSHNVDNLSLA 129
>AT1G51370.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:19045615-19047141
FORWARD LENGTH=435
Length = 435
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 124/298 (41%), Gaps = 22/298 (7%)
Query: 52 NNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTK 111
DR+S LP+ ++ IL + +++V+T LST+W+ LW+S+P L L S
Sbjct: 17 EEDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSVPGLDLDPYASSNTNTIVS 76
Query: 112 FVSKLLE-LRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYDYCHVAR 170
FV + RD + D H ++ +D A + +Q L + +D
Sbjct: 77 FVESFFDSHRDSWIRKLRLDLGYHHDKYDLMS--WIDAATTRRIQHLDVHCFHDNKIPLS 134
Query: 171 IFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQVEPFSA 230
I++C +L L+L ++ + +S LP L +H ++ Q + S
Sbjct: 135 IYTCTTLVHLRL-----RWAVLTNPEFVS----LPCLKIMHFENVSYPNETTLQ-KLISG 184
Query: 231 FKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGDFHKIELSAPSLQ--RFDFTGSS 288
L LI+ + + S TL R +F + + AP LQ R +
Sbjct: 185 SPVLEELILFSTMYPKGNVLQLRSDTL----KRLDINEFIDVVIYAPLLQCLRAKMYSTK 240
Query: 289 PYKRLCGSSLSSVKELSIDAYMGSYSPEPPLVLLSWLEELTNIKSLTVSTNTLQVLFL 346
++ + S + ++ G Y + V+ L +++ ++ L +S+NT + FL
Sbjct: 241 NFQ-IISSGFPAKLDIDFVNTGGRYQKKK--VIEDILIDISRVRDLVISSNTWKEFFL 295
>AT1G32375.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:11679230-11680679
FORWARD LENGTH=422
Length = 422
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKI--FTK 111
D+LS LP+ +L+ ILS + A++ V T +LS RW+ LW +P LI + ++ F++
Sbjct: 2 DKLSQLPEALLVRILSLLSAKDVVSTMVLSKRWQFLWMLVPKLI-YDDSYQAIEYGSFSR 60
Query: 112 FVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRV-VDYALSHNVQRLAMTVEYDYCHVAR 170
FV + L D + L + F+ + RV + A ++ L + ++ +
Sbjct: 61 FVDRSFTLHDAQV-LDTLHFKLGKTSCGTGDIRVWIKTAEKSCLRELIIEIDKSNSDNSS 119
Query: 171 IF-------SCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNG 223
+ C+ L +LKL+ T S SF P+L +L LV F G
Sbjct: 120 VVLPRSLYTCCRMLVTLKLNNAVLVDATSSFSF--------PSLKTLSLVSMKFPGDELI 171
Query: 224 QVEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTL 257
++ S L L+++ C N TF + ++L
Sbjct: 172 KM-LLSNCPVLEDLVVKRCPYDNVTTFTVRVSSL 204
>AT3G59200.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21887484-21889214 FORWARD LENGTH=520
Length = 520
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 121/280 (43%), Gaps = 38/280 (13%)
Query: 51 VNNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLK--- 107
V+ DR+S LP+ V+ HILSF+ + A T +LS +W+ L+ + +L D+ K
Sbjct: 4 VSRDRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFDDSDYQDGKPKS 63
Query: 108 ------IFTKFVSKLLELRDG------SLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQ 155
F +FV ++L L+ SL ++D + +I++ L V
Sbjct: 64 DVELSRSFMEFVDRVLALQGNGSVNKFSLECSNYDVDLARVTGWILN------VLGRGVS 117
Query: 156 RLAMTVEYDYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGF 215
L +++ +Y + IF ++L LKL N + + LP L +L++
Sbjct: 118 ELDLSI-LEYPLPSEIFVSKTLVRLKLGPA----NDLTLTLDRKDVF-LPKLKTLYIDCV 171
Query: 216 TFHGSNNGQVEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTM--RTPFGDFHKIE 273
G V+ S L L++ N +N + +S TL +T + + +
Sbjct: 172 DVQERGFGFVKLLSGCPVLEELVLMNIGWENWKFCSVSVKTLKRLTFFCEETYENPKSVS 231
Query: 274 LSAPSLQRFDFTG--SSPYKRLCGSSLSSVKELSIDAYMG 311
P+L +++ +S Y ++ +SL ++A++G
Sbjct: 232 FDTPNLVYLEYSDAIASKYPKVNFNSL-------VEAHIG 264
>AT1G51370.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:19045615-19046748
FORWARD LENGTH=346
Length = 346
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 122/296 (41%), Gaps = 22/296 (7%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
DR+S LP+ ++ IL + +++V+T LST+W+ LW+S+P L L S FV
Sbjct: 19 DRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSVPGLDLDPYASSNTNTIVSFV 78
Query: 114 SKLLE-LRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYDYCHVARIF 172
+ RD + D H ++ +D A + +Q L + +D I+
Sbjct: 79 ESFFDSHRDSWIRKLRLDLGYHHDKYDLM--SWIDAATTRRIQHLDVHCFHDNKIPLSIY 136
Query: 173 SCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQVEPFSAFK 232
+C +L L+L F ++LP L +H ++ Q + S
Sbjct: 137 TCTTLVHLRLRWAVLTNPEF---------VSLPCLKIMHFENVSYPNETTLQ-KLISGSP 186
Query: 233 KLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGDFHKIELSAPSLQ--RFDFTGSSPY 290
L LI+ + + S TL R +F + + AP LQ R + +
Sbjct: 187 VLEELILFSTMYPKGNVLQLRSDTL----KRLDINEFIDVVIYAPLLQCLRAKMYSTKNF 242
Query: 291 KRLCGSSLSSVKELSIDAYMGSYSPEPPLVLLSWLEELTNIKSLTVSTNTLQVLFL 346
+ + S + ++ G Y + V+ L +++ ++ L +S+NT + FL
Sbjct: 243 Q-IISSGFPAKLDIDFVNTGGRYQKKK--VIEDILIDISRVRDLVISSNTWKEFFL 295
>AT3G58880.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21768485-21770167 REVERSE LENGTH=454
Length = 454
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 149/338 (44%), Gaps = 38/338 (11%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSL-----ILLSPD------ 102
D +S LPD +L HILS + + A T ILS RW+ L +P L L+P+
Sbjct: 3 DLVSSLPDDLLGHILSLLTTKEAALTSILSKRWRYLIAFVPYLEFDDSAFLNPEEGKQTR 62
Query: 103 FSTLKIFTKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVE 162
T + F FV ++L L G P+ F + ++ + + + L V + ++++
Sbjct: 63 EGTRQSFIDFVDRVLALH-GDSPIRKFSLKCKTGVDLDLLNQWICNVLQRGVLLIDLSMD 121
Query: 163 YDY-CHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSN 221
+ C IF ++L LKL + +F LP L +L L ++ S+
Sbjct: 122 LGHRCMFIEIFMSRTLVELKLG------SGCRIAFGPEHISALPMLKTLTLDSVSW--SD 173
Query: 222 NGQVEP-FSAFKKLHSLIIRNC--TVKNAQTFCISSTTLVDVTMRTPFGDFHKIELSAPS 278
+GQ+E SA L +L + N + NA T I+S + + + G H P+
Sbjct: 174 SGQLERLLSACPALEALNLANVHGSYPNA-TVSIASLKTLTIKSVSLSGPAHVFSFDTPN 232
Query: 279 LQRFDFTG----SSPYKRLCGSSLSSVKELSIDAYMGSYSPEP-PLVLLSWLEEL----T 329
L ++T P L + +K + D + S L++LS +++L +
Sbjct: 233 LLCLNYTALFEDDYPLVNLEYLVEAQIKFVLTDRLIKLVSVRKNGLLMLSEVQKLIRGIS 292
Query: 330 NIKSLTVSTNTLQVLFLIPDLVNRKLPFLSNLKSLKVK 367
+++ L +S TLQVL ++ +P +NL L ++
Sbjct: 293 SVRKLYLSPGTLQVL----GQCSQAMPVFNNLTFLVIE 326
>AT3G18150.1 | Symbols: | RNI-like superfamily protein |
chr3:6217929-6219500 FORWARD LENGTH=456
Length = 456
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 145/337 (43%), Gaps = 44/337 (13%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
D +S LPD +L HILSF+ + A+ T +LS RW+ +W PSL F+ ++ F+
Sbjct: 31 DSISSLPDVILQHILSFIPTKLAITTSLLSKRWRHVWCDTPSL-----SFNDYRLEAPFI 85
Query: 114 SKLLELRDGSLPLHSFDFERHGS-IEYIVH-RRVVDYALSHNVQRLAMTVEYDYCHVARI 171
+ L S + F H S I + H + +A+S NV L++ + + VA
Sbjct: 86 DETLTRYTASKMMR---FHLHTSLINNVPHLESWIKFAMSRNVDHLSLDL---WNQVANK 139
Query: 172 FSCQSLTSLKLSVHPKQYNT---FSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQVEPF 228
F + S+ KQ FS + I+ CL L++ L S+
Sbjct: 140 FKFPDFFHINSSL--KQLTVVLDFSDTM-IAICLKKLYLSTCLL-------SDESMANIL 189
Query: 229 SAFKKLHSLIIRNCTVKNAQTFCIS---STTLVDVTMRTPFGDFHKIELSAPSLQRFDFT 285
L SL + +C S T ++ + P + +++ AP
Sbjct: 190 FGCPILESLTLDHCGGLRVLDLSKSLRLRTLEINCNIWVP--ELTAMQIVAPHTHCLRLR 247
Query: 286 GSSPYKRLCG-SSLSSVKELSIDAYMGSYSPEPP-----LVLLSWLEELTNIKSLTVSTN 339
S K C +SS+KE ++ + S+S + LL LE+L N++ LT+ N
Sbjct: 248 NS---KLPCSLVDVSSLKEAKLNICIDSFSKTIKADFLQVTLLKMLEKLHNVEKLTLGGN 304
Query: 340 TLQVLFLIPDLVNRKLPF-LSNLKSLKVKVQRLSYIL 375
LQ+L + +L R +PF + +K L ++ Y++
Sbjct: 305 FLQILS-VAEL--RGVPFPMFKVKDLTLETVIFQYVI 338
>AT1G66320.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:24727041-24728614 REVERSE LENGTH=457
Length = 457
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 131/312 (41%), Gaps = 42/312 (13%)
Query: 58 DLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFVSKLL 117
DLP+ +L +L + ++ V+T ++S W+ LW+ +P L L DF+ F+ L
Sbjct: 34 DLPESLLFQVLLNIPTKDLVKTSVVSPEWRHLWRCVPGLDLDEADFTQFDTLVSFIDSFL 93
Query: 118 ELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYDYCHVAR------- 170
+ S L+ F Y H R + +H + ++ VE + HV
Sbjct: 94 SINRES-SLNKFKLRI-----YCNHDRDKETNNAHMARWISAIVEQNVQHVDLTWLPVEV 147
Query: 171 ---IFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQVEP 227
++ C+SL +L+L + LP + L L F +N +E
Sbjct: 148 PPILYLCESLVTLRLC---------GVVLANLEFMYLPLVKVLALEWVIF--ANELALEK 196
Query: 228 F-SAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFG-DFH----KIELSAPSLQR 281
S L SL C++ N + S +L+ P D H + + AP L+
Sbjct: 197 LISGCLVLESLRFCKCSLDNVNVLRVRSQSLLSFNYYGPSSRDLHFKDLAVTIDAPKLEI 256
Query: 282 FDF----TGSSPYKRLCGSSLSSVKELSIDAYMG-SYSPE---PPLVLLSWLEELTNIKS 333
T S K+L +++K + + +G ++P ++L +L ++ +K+
Sbjct: 257 LKLSHQVTSSFIIKKLSSLVEANIK-VEFNFCVGKKFNPNDLSKRKMILHFLVAISRVKN 315
Query: 334 LTVSTNTLQVLF 345
+T++ +TL++++
Sbjct: 316 MTIAASTLEIIY 327
>AT3G03040.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:684685-686277 FORWARD LENGTH=472
Length = 472
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 137/337 (40%), Gaps = 35/337 (10%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDF---------- 103
D LS LPD V ILSF+ + + T +LS +W++L+ +P+L +F
Sbjct: 2 DLLSSLPDEVRCLILSFLTTKESASTSVLSKKWRNLFALVPNLDFDDSEFLHPEEGKRER 61
Query: 104 -STLKIFTKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVE 162
L+ F FV ++L L+ G+ + F + + R + L +V + +T++
Sbjct: 62 DGILQSFMDFVDRVLSLQ-GNSSIRKFSLKCETGVPPARVNRWLCEVLQRDVSDIDLTID 120
Query: 163 --YDYCHVARIFSCQSLTSLKLSVHPKQYNTFSTS-FPISSCLNLPALTSLHLVGFTFHG 219
Y Y +F ++L +LKL + F+ +P + +LP L SL + G
Sbjct: 121 LGYGYYLPEELFVSETLVNLKLK------SAFNIDWWPGAEGTSLPMLKSLCVYGVRVFC 174
Query: 220 SNNGQVEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGDFHK-IELSAPS 278
+ Q E F L L + N ++ +SS TL + + + K I P+
Sbjct: 175 DDELQ-ELLPCFPVLEELQMSNMQWLDSDE-TVSSATLTTLHITGIRSENPKSISFDTPN 232
Query: 279 LQRF---DFTGSS-PYKRLCGSSLSSVKELSIDAYMGSY-SPEPPLVLLSWLEELTNIKS 333
L F DF P + SL+ + + D + P L+ + N+
Sbjct: 233 LLSFVYTDFVAEDYPLVNMKNLSLARLALRANDDQIKRVRGPSNDLLEYDVVRHFGNVVK 292
Query: 334 LTVSTNTLQVLFLIPDLVN------RKLPFLSNLKSL 364
L +Q L L PD + +P +N+K L
Sbjct: 293 LMNGIQNVQELHLCPDTLELLSVCCESMPVFNNVKKL 329
>AT5G56690.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr5:22939723-22941099
FORWARD LENGTH=402
Length = 402
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 25/171 (14%)
Query: 56 LSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFVSK 115
+S LPD +L+ IL+F+ + A+ T +LS +W+ LW LP L D+ + VS
Sbjct: 4 ISGLPDDLLVKILAFLPTKVAISTSVLSKQWRFLWMWLPKLKY--DDYDDITDGFNSVSA 61
Query: 116 LLELRD---GSLPLH--------SFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYD 164
RD +LPLH S F R G+++ + V+ A+S +V+ L++ Y
Sbjct: 62 FQTYRDFIAKNLPLHRAPIIESLSLGF-RCGTLQPEDLKSWVEVAVSRSVRELSILAYYR 120
Query: 165 YCHV---ARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHL 212
+ + +++C+SL +L K +N P + CL LP+L +L L
Sbjct: 121 NNYALSSSSLYTCKSLVTL------KGFN-IRVDVPPTVCL-LPSLRTLEL 163
>AT5G56820.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22976334-22977838
FORWARD LENGTH=435
Length = 435
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 53 NDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLIL 98
+DR+S LPD +LL ILSF+ +A+ T +LS RWK +WK +P+L L
Sbjct: 14 SDRISYLPDDLLLRILSFIHTSDAISTSLLSKRWKFVWKMMPTLDL 59
>AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 83/184 (45%), Gaps = 28/184 (15%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
DR+S LPD VL+ ILSFV + AV T ILS RW+ LW L L S +S ++F
Sbjct: 2 DRISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSE----SEF- 56
Query: 114 SKLLELRDGSLPLH------SFDF---ERHGSIEYIVHRRVVDYALSHNVQRLAMTV--- 161
+L D +LPLH SF + H E I R V A+S ++ L +
Sbjct: 57 KRLQCFLDRNLPLHRAPVIESFRLVLSDSHFKPEDI--RMWVVVAVSRYIRELKIYSSHY 114
Query: 162 -EYDYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGS 220
E + +++C+SL LKL P C LP+L +L L G +
Sbjct: 115 GEKQNILPSSLYTCKSLVILKLD------GGVLLDVPRMVC--LPSLKTLELKGVRYFKQ 166
Query: 221 NNGQ 224
+ Q
Sbjct: 167 GSLQ 170
>AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 83/184 (45%), Gaps = 28/184 (15%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
DR+S LPD VL+ ILSFV + AV T ILS RW+ LW L L S +S ++F
Sbjct: 2 DRISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSE----SEF- 56
Query: 114 SKLLELRDGSLPLH------SFDF---ERHGSIEYIVHRRVVDYALSHNVQRLAMTV--- 161
+L D +LPLH SF + H E I R V A+S ++ L +
Sbjct: 57 KRLQCFLDRNLPLHRAPVIESFRLVLSDSHFKPEDI--RMWVVVAVSRYIRELKIYSSHY 114
Query: 162 -EYDYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGS 220
E + +++C+SL LKL P C LP+L +L L G +
Sbjct: 115 GEKQNILPSSLYTCKSLVILKLD------GGVLLDVPRMVC--LPSLKTLELKGVRYFKQ 166
Query: 221 NNGQ 224
+ Q
Sbjct: 167 GSLQ 170
>AT5G18770.1 | Symbols: | F-box/FBD-like domains containing protein
| chr5:6261426-6263172 FORWARD LENGTH=481
Length = 481
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 19/176 (10%)
Query: 52 NNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFT- 110
D +S LPD +L HIL F+ +V T +LS+RW++LWK +P L L + DF T
Sbjct: 22 GEDMISALPDHLLCHILIFLSTDESVLTSVLSSRWRNLWKWVPRLDLNTSDFPYPNDVTC 81
Query: 111 -KFVSKLLE------LRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEY 163
F+ K L LR+ L + +F + S+ V+ + Q + +E+
Sbjct: 82 AAFIDKFLNLYNESYLREFKLRIDQANFRSNVSLYEPCLGVVIKKPNVRHFQVESDLLEH 141
Query: 164 DYCHVARIF--SCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTF 217
R+ +CQ+L LKL H N F + L+LP L ++L F
Sbjct: 142 WCTSEIRLTLSACQALVCLKL--HLVWLNDFES-------LSLPCLKIMYLEDVVF 188
>AT5G22730.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:7551632-7553219
REVERSE LENGTH=466
Length = 466
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 99/229 (43%), Gaps = 28/229 (12%)
Query: 52 NNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTK 111
D +S LPD ++ IL ++ ++ V+T LS+RWK LW +P L L S +F F
Sbjct: 26 GEDLISKLPDSLITQILLYLPIKDIVRTSSLSSRWKSLWLLIPRLDLDSEEFQDYNAFVG 85
Query: 112 FVSKLLELR-DGSLPLHSFDFERHGSIEYI-VHRRVVDYALSHNVQRLAMTVEYDYCHVA 169
F++K ++ + + L ++ + R +D+ + ++ L + C V
Sbjct: 86 FMNKFIDFSGEEKICLDKLKLSSRKTVNDLPCVTRWIDFVVRRKLKHLDVE-----CLVN 140
Query: 170 R---------IFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGS 220
R ++ C +L +L+L H F ++LP L ++ L + +
Sbjct: 141 RKFLEEMPLSLYVCDTLVNLRL--HRVLLGKFEA-------VSLPCLKTMRLEENVY--A 189
Query: 221 NNGQVEPF-SAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGD 268
N+ +E S+ L LII N + + S TL + + FG+
Sbjct: 190 NDVVLESLISSCPVLKDLIILRMFEDNVKVLRVHSLTLTSLNIDFNFGE 238
>AT1G67390.1 | Symbols: | F-box family protein |
chr1:25244690-25247139 FORWARD LENGTH=479
Length = 479
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 34/44 (77%)
Query: 53 NDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSL 96
+DR+S LPD VL+ IL+ + +A++T +LSTRWK++WK +P L
Sbjct: 40 DDRISKLPDDVLVMILASLSTEDALKTSVLSTRWKNVWKQVPYL 83
>AT4G13985.1 | Symbols: FBD1 | FBD-associated F-box protein |
chr4:8080118-8081669 REVERSE LENGTH=459
Length = 459
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 147/343 (42%), Gaps = 47/343 (13%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDF--------ST 105
DRL +LPDC+L IL + ++ V+ +LS RW+++W+ +P L L DF S
Sbjct: 19 DRLRNLPDCLLFKILLNLPTKDVVKLSVLSRRWRNVWRYVPGLDLECGDFMVREYYDSSE 78
Query: 106 LKIFTKFVSKLLELRDGS------LPLHSFDFERHGSIEY------IVHRRVVDYALSHN 153
FV + L S L ++ +D + ++ + +V R+V +
Sbjct: 79 FNALLGFVYRFLGFNSESCLQKFKLTVNWYDDVQLETVHFTEWFNAVVKRKV------QH 132
Query: 154 VQRLAMTVEYDYCHV-ARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHL 212
+ L T D + +F+C SL SL N + P ++LP+L + L
Sbjct: 133 LHILDKTWGRDEVVIPPTVFTCGSLISL---------NLYDVYLPNREFVSLPSLKVIVL 183
Query: 213 VGFTFHGSNNGQVEPFSAFKKLHSLIIRNCTVKN-AQTFCISSTTLVDVTMRTPFGDFHK 271
F ++ S L SL + + + +++ +SS +L+ + D+ +
Sbjct: 184 DAVVFDEDFAFEM-LVSGCPVLESLSVNKINLNDISESVQVSSQSLLSFSYVADDDDYLE 242
Query: 272 IELSAPSLQRFDFTGSSPYKRLCGSSLSSVK-ELSIDAYMGS-YSPEPPL-----VLLSW 324
+ + AP L + + S +K ++ +GS Y +P ++ +
Sbjct: 243 VVIDAPRLHYLKLNDKRTASFIMKNHGSLLKADIDFVFNLGSEYMFDPNYLPTRHIIRDF 302
Query: 325 LEELTNIKSLTVSTNTLQVLFLIPDLVNRKLPFLSNLKSLKVK 367
L L+ +K + +S++TLQV++ +LP N+ L+V+
Sbjct: 303 LVGLSGVKDMIISSSTLQVIYDYSRC--EQLPLFRNVSFLRVE 343
>AT5G56810.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22974520-22975992
FORWARD LENGTH=435
Length = 435
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKI--FTK 111
DR+S LP+ +L ILS + +A+ T +LS RWK +WK LP+L+ S + F +
Sbjct: 15 DRISQLPNDLLFRILSLIPVSDAMSTSLLSKRWKSVWKMLPTLVYNENSCSNIGSLGFDQ 74
Query: 112 FVSKLLELRDGSL 124
F + L+L + L
Sbjct: 75 FCGRSLQLHEAPL 87
>AT3G58980.1 | Symbols: | F-box family protein |
chr3:21794445-21797006 REVERSE LENGTH=594
Length = 594
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 106/253 (41%), Gaps = 30/253 (11%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLS--PDFSTLKIFTK 111
DR+S+LP+ ++ HI+SF+ A+ A ILS RW++L+ + L + +LK F
Sbjct: 2 DRISNLPNEIICHIVSFLSAKEAAFASILSKRWRNLFTIVIKLQFDDSVKNEGSLKDFVD 61
Query: 112 FVSKL----------LELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTV 161
V L LE R P H DF R I ++ R ++D L R
Sbjct: 62 GVLALPTSSRVRSCSLECRREFDPTHYDDFNR--CICALLKRGILDLKLDICAGR----- 114
Query: 162 EYDYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSN 221
Y +F+C++L L+L + F LPAL +L L F
Sbjct: 115 --RYSLPLEVFTCKTLVKLELG---SDFGGFVVDLVPEDAF-LPALETLLLNYIRFKDLR 168
Query: 222 NGQVEP-FSAFKKLHSLIIRNCTVKNAQ-TFCISSTTLVDVTM---RTPFGDFHKIELSA 276
E SA L L+I N + + + ISS TL +T+ +F +I L
Sbjct: 169 RCAFEKLLSACLVLKELVIHNMEWERWKWSGNISSPTLERLTISHVDLYECEFTRINLDT 228
Query: 277 PSLQRFDFTGSSP 289
P+L + + + P
Sbjct: 229 PNLTYLELSDAVP 241
>AT3G49030.2 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr3:18173138-18174769
FORWARD LENGTH=417
Length = 417
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 51 VNNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSL 96
V DR+S+LP+ +LL ILS + N + T +LS RW+ LWK +P+L
Sbjct: 18 VKEDRISELPEDLLLQILSDIPTENVIATSVLSKRWRSLWKMVPNL 63
>AT3G49030.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr3:18173138-18174769
FORWARD LENGTH=443
Length = 443
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 51 VNNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSL 96
V DR+S+LP+ +LL ILS + N + T +LS RW+ LWK +P+L
Sbjct: 18 VKEDRISELPEDLLLQILSDIPTENVIATSVLSKRWRSLWKMVPNL 63
>AT1G66290.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:24713306-24714843 REVERSE LENGTH=453
Length = 453
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 138/314 (43%), Gaps = 42/314 (13%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
D +SDLP+ +++ +L + ++ ++T +LST+W+++W+ +P L L + F+ F+
Sbjct: 29 DWISDLPEALIVLVLLNLPTKDVIKTSVLSTKWRNIWRYVPRLDLDNRHFTEFDSLASFI 88
Query: 114 SKLL---------ELRDGSLPLHSFDFERHGSIEY-IVHRRVVDYALSHNVQRLAMTVEY 163
+ + +LR GS + G ++ + + A+ VQ + +T
Sbjct: 89 DRFMRSNRKVNKFKLRCGS--------DLDGDVDLATCSWKWIYMAIKRKVQHIDVTWPG 140
Query: 164 DYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNG 223
+ I++C+SL SLKLS + ++LP+L L L F+
Sbjct: 141 VRIY-PEIYNCESLVSLKLS---------EVTLTKPEFVSLPSLKVLVLDWVEFYNEFAF 190
Query: 224 QVEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTM----RTPFGDFHKIELSAPSL 279
+ S L S + + N + + S +L+ F D + L AP L
Sbjct: 191 DM-LMSGCPVLESFTLCRRYLDNVRVLRVISQSLLSFNYYGSSSKSFRDDLVVILDAPKL 249
Query: 280 QRFDFTGSSPYKRLCGSSLSSVKELSIDAYMG-----SYSPE--PPLVLL-SWLEELTNI 331
++ + + +LSS+ E ID + P+ P ++ ++L L+ +
Sbjct: 250 EKLKLSHQLTASFII-ENLSSLVEADIDIEFNFCRGKKFDPDDLPKREMIRNFLVGLSRV 308
Query: 332 KSLTVSTNTLQVLF 345
K++T++ TL+V++
Sbjct: 309 KTMTIAACTLEVIY 322
>AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:63465-65365 FORWARD
LENGTH=453
Length = 453
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 51 VNNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFT 110
+ DR+S+LPD +L+ ILSF+ + V T + S +W+ LWK +P+L S D+ + +T
Sbjct: 13 MGKDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFDSEDYDDKEQYT 72
>AT3G58920.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21776293-21777988 FORWARD LENGTH=470
Length = 470
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 142/353 (40%), Gaps = 57/353 (16%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
DR+S+LP+ ++ HI+SF+ A+ A +LS RW++L+ + L FV
Sbjct: 2 DRISNLPNEIICHIVSFLSAKEAAFASVLSKRWQNLFTIVQKL-EFDDSVKNQGSLMDFV 60
Query: 114 SKLLEL------RDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQR------LAMTV 161
+ +L L SL SF +R ++ VV+ L + ++R L +
Sbjct: 61 NGVLALPVTTRISKFSLRFDSF-LKRKLETGLVIGPHVVNRCLCNVLKRGVLDLKLEIYG 119
Query: 162 EYDYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLN---LPALTSLHLVGFTFH 218
E Y + +F+C+++ LKL+ F+ S+ I LP L SL L F
Sbjct: 120 EDGYLLPSEVFTCKTIVDLKLTS-----CIFAESYVIDVIPENAFLPGLESLFLKSIWFS 174
Query: 219 GSNNGQVEPFSAFKKLHSL--IIRNCTVKNAQ------TFCISSTTLVD-VTMRTPF--- 266
AF+ L S +++ T+ + Q + +SS TL + RT F
Sbjct: 175 DLRG------CAFQTLLSACPVLKTLTIYDVQWEKWKWSRTVSSATLERLIIQRTEFTYF 228
Query: 267 --GDFHKIELSAPSLQRFDFTGSSPYKRLCGSSLSSVKELSIDAYMGSYSPEPPLVL--- 321
DF I PSL + P + +L S+ E + + P L
Sbjct: 229 NGSDFKSITFDTPSLTYLKYIDFVP-EEYPVVNLDSIVEAKLHLILTGNQDYPVRYLGRE 287
Query: 322 --------LSWLEELTNIKSLTVSTNTLQVLFLIPDLVNRKLPFLSNLKSLKV 366
+ ++ L N++ L +ST T Q+L P LP NL L +
Sbjct: 288 DDPITSNPTNLIKGLRNVEILHLSTATAQMLCFFP---RETLPEFVNLHHLTI 337
>AT3G59230.1 | Symbols: | RNI-like superfamily protein |
chr3:21896052-21897787 REVERSE LENGTH=491
Length = 491
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 84/172 (48%), Gaps = 16/172 (9%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSL-----ILLSPDFSTLK- 107
D ++ LP+ ++ HILSF+ + A T +LS +W+ + +P+L + + PD +
Sbjct: 12 DIINSLPEALIYHILSFLSTKEAAITSLLSRKWRYFFAFVPNLDFDDPVRMQPDMGNQEE 71
Query: 108 -----IFTKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVE 162
F FV ++L LR G+ ++ F + ++ + R + L +V L +++
Sbjct: 72 TEIHTSFMDFVDRVLALR-GNSHVNKFSLKCGNGVDGVGVTRWILNTLELSVSELDLSIA 130
Query: 163 YD--YCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHL 212
D Y +++F +SL ++L + + F + ++LP L +L+L
Sbjct: 131 SDTTYLFPSKVFVSKSL--VRLRIEARNGLAFGSLVIDVGDVSLPKLKTLYL 180
>AT5G56440.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22855742-22857117
REVERSE LENGTH=430
Length = 430
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 108/253 (42%), Gaps = 32/253 (12%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIF--TK 111
DR+S LPD V+ ILSFV + V T +LS RW+ LWK +P L P + + ++
Sbjct: 2 DRISLLPDDVVFKILSFVPTKVVVSTNLLSKRWRYLWKHVPKLDYRDPSLVDTEHWRASR 61
Query: 112 FVSKLLELRDGSL--PLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYDY---- 165
FV K L L + + LH R+ I + A+S V+ L + Y Y
Sbjct: 62 FVDKFLLLHEAPVLETLH-LSLSRNCPPSDI--ETWISVAISRRVRNLHI---YRYIPST 115
Query: 166 --CHVAR-IFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNN 222
+ R +++C++L SL L + F + + SL ++ F ++
Sbjct: 116 GPIRLPRSLYTCETLVSLYLLL----------DFTVDDAPFMFCFRSLKVLVLLFAKFSS 165
Query: 223 GQV--EPFSAFKKLHSLII--RNCTVKNAQTFCISSTTLVDVTMRTPF-GDFHKIELSAP 277
++ S L LI+ RN VKN S L+ + R+ GD + AP
Sbjct: 166 DEIVNRLLSGCPVLEGLILIRRNDNVKNFTIAAPSLQRLIAIDCRSQVPGDDVGFVIKAP 225
Query: 278 SLQRFDFTGSSPY 290
SL+ SP+
Sbjct: 226 SLKSLTLLNFSPH 238
>AT3G58960.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:21787146-21788807
REVERSE LENGTH=475
Length = 475
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 150/356 (42%), Gaps = 67/356 (18%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
DR+S L + ++ +I+SF+ A++A +LS RW++++ +P+L T F+
Sbjct: 2 DRISSLSNDIISNIVSFLSAKDAAVASVLSKRWQNIYTIVPNL-EFDNTLENQGSLTDFL 60
Query: 114 SKLLEL---------------RDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLA 158
+ LL L RDG P D R + ++ R V+ L +
Sbjct: 61 NGLLALPASTRIKNVSIKRRGRDG--PNRDADLNRF--LCNVLKRGVLKLKLD-----IW 111
Query: 159 MTVEYDYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFH 218
+T++ Y +F+C++L L+L + + L LPAL +L + F
Sbjct: 112 VTLDGRYSLPVEVFTCKTLVELELG------SILQIDLVPENAL-LPALKTLIIDAVQFS 164
Query: 219 GSNNGQVEPFSAFKKLHS-------LIIRNCTVKNAQ-TFCISSTTLVDVTM--RTPFG- 267
+ AF+KL S L + N ++ Q + +SS TL +TM R FG
Sbjct: 165 DQSG------CAFQKLLSSCPVLVELRMLNVQWEHWQWSRRVSSPTLEKLTMNHRYHFGN 218
Query: 268 ---DFHKIELSAPSLQRFDFTGSSPYKRLCGSSLSSVKELSID-------AYMGSYSPEP 317
D I PSL + P K +L S+ E +I A+ G ++
Sbjct: 219 TYYDMEGITFDTPSLTSLKYYDLPP-KSYPTVNLDSLVEATISLTLPLHHAWTGKHARRG 277
Query: 318 PLV--LLSWLEELTNIKSLTV-STNTLQVLFLIPDLVNRKLPFLSNLKSLKVKVQR 370
V + + ++ L N+++L + ST+T+ + N +P NL L + +R
Sbjct: 278 DTVPSVTNLIKGLRNVETLNLSSTDTVAAFY----FSNEAIPVFENLHRLSIATER 329
>AT5G60610.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:24364049-24365386 FORWARD LENGTH=388
Length = 388
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSL 96
DR+S LPD +L+ I+SFV + AV T ILS RW+ LWK +P L
Sbjct: 2 DRISGLPDELLVKIISFVPTKVAVSTSILSKRWESLWKWVPKL 44
>AT4G15060.1 | Symbols: | CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), F-box domain, Skp2-like
(InterPro:IPR022364), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: FBD, F-box and
Leucine Rich Repeat domains containing protein
(TAIR:AT1G55660.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
0; Other Eukaryotes - 2996 (source: NCBI BLink). |
chr4:8599035-8601761 FORWARD LENGTH=539
Length = 539
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 28/276 (10%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFST--LKIFTK 111
D++S LPD +L+ +L F+ + AV T ILS RW+ LW LP L + ++S +
Sbjct: 172 DKISRLPDDLLVKVLLFLPTKIAVSTSILSKRWEFLWMWLPKLEYHNTNYSASEEQRLRS 231
Query: 112 FVSKLLEL-RDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYDYCHV-- 168
F++ L+L R + F SI+ ++ + A+ V+ L++ + YC
Sbjct: 232 FINLNLQLHRAPIIESLRLKFSLGRSIKPQNIKQWIIIAVFRCVRELSINLFPLYCIENP 291
Query: 169 ----ARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQ 224
+ ++ +SL LKL + P + LP+L L L T+ SN+
Sbjct: 292 AKLPSSLYISKSLVILKLK------DQILVDVPRMA--YLPSLKYLLLKRVTYKDSNSLH 343
Query: 225 VEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMR-TPFGDFHKIELSAPSLQRFD 283
+ S+ L +L++ + +T I+ ++L +T++ + G F ++ ++ PSL+ F
Sbjct: 344 -QLLSSCPVLKNLVVERDEYNHDETLSITVSSLQRLTLKISRGGSFDELVINTPSLKYFK 402
Query: 284 FTGSSPYKRLCGSSLSSVKELSIDAYMGSYSPEPPL 319
T Y C + EL D+Y + P L
Sbjct: 403 LTD---YLGECET------ELDDDSYSYVFKDMPKL 429
>AT4G09920.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr4:6224691-6225905
FORWARD LENGTH=316
Length = 316
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
DR+ LPD VL+ ILSFV + AV T ILS RW+ LW L L S +S ++F
Sbjct: 2 DRIIGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSE----SEF- 56
Query: 114 SKLLELRDGSLPLH------SFDF---ERHGSIEYIVHRRVVDYALSHNVQRLAMTV--- 161
+L D +LPLH SF + H E I R V A+S ++ L +
Sbjct: 57 KRLQCFLDRNLPLHRAPVIESFRLVLSDSHFKPEDI--RMWVVVAVSRYIRELKIYSSHY 114
Query: 162 -EYDYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGS 220
E + +++C+SL LKL P C LP+L +L L G +
Sbjct: 115 GEKQNILPSSLYTCKSLVILKLD------GGVLLDVPRMVC--LPSLKTLELKGVRYFKQ 166
Query: 221 NNGQ 224
+ Q
Sbjct: 167 GSLQ 170
>AT1G49610.1 | Symbols: | F-box family protein |
chr1:18361679-18363192 REVERSE LENGTH=354
Length = 354
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 13/122 (10%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDF-STLKIFTKF 112
D +S LPD +L LS + + A++T +LS RW+ +W PSL DF K+ F
Sbjct: 26 DSISSLPDVILQENLSLIPTKFAIRTSVLSKRWRHVWSETPSL-----DFDDCYKLDVDF 80
Query: 113 VSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEY------DYC 166
+ K L L + +FD I + +A+S NV+ L ++ ++ DY
Sbjct: 81 IDKTLALYRAR-KIMTFDLWITNGINLPYIDGWIKFAMSRNVENLFLSFDFRLYDVPDYL 139
Query: 167 HV 168
++
Sbjct: 140 YI 141
>AT3G50710.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:18845199-18846673
REVERSE LENGTH=427
Length = 427
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 40/262 (15%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLIL-----LSPDFSTLKI 108
DR+S+L D +LL I+S + ++ V T +LS RWK LW +P L L P +
Sbjct: 2 DRISNLSDDLLLKIVSSLPTKDVVVTMLLSKRWKFLWMMVPKLRFDDEFELEPSYYGR-- 59
Query: 109 FTKFVSKLLEL-RDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYDYCH 167
F K+V K + L R L F+ S E I + + N++ L ++ Y
Sbjct: 60 FLKYVDKSMVLNRAQVLETVKFNVGPCCSSEDIA--TWIRIGMVRNMRELEISHCEGYFR 117
Query: 168 VAR-------IFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGS 220
R +++ + L LKL+ +T + PI C P+L SLHLV +
Sbjct: 118 EHRSIKLPKSLYTYEKLEVLKLA------STVVLNVPIDVC--FPSLKSLHLVCVEYKTK 169
Query: 221 NNGQ--------VEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGDFHKI 272
+ + +E K +S +R+ V+ + S +++D + +GDF +
Sbjct: 170 KSHRRLLSGCPVLEELVLDKSYNSFHVRSFYVEIPT---LQSLSILDTSGEL-YGDFTFV 225
Query: 273 ELSAPSLQRFDFTGSSPYKRLC 294
++AP+L+ F+F Y LC
Sbjct: 226 -VNAPALKYFNFVDF--YGDLC 244
>AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 39/286 (13%)
Query: 51 VNNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDF-STLKIF 109
+ DR+S+LPD +LL ILS + V T +LS +W+ LWK +P+L S D+ S F
Sbjct: 18 MGKDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDSDDYESEHYTF 77
Query: 110 TKFVSK---------LLELRDGSLPLHSFDFERHGSIEYIVHRR--VVDYALSHNVQRLA 158
++ V K L R + + D I + H R V+D+ + + +
Sbjct: 78 SEIVCKSFLSHKAPVLESFRLKFVNFNPVDIGLWVGIAFSRHLRELVLDFYPAELGKGVT 137
Query: 159 MTVEYDYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFH 218
T C +C +L +LKL I S + + +L +LHL F +
Sbjct: 138 FTFPSSLC------TCNTLETLKL--------VLCILVDIPSPVLMKSLRTLHL-EFVRY 182
Query: 219 GSNNGQVEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTM--RTPFGDFHKIELSA 276
+ S L L + + + F I +L +T+ +F ++A
Sbjct: 183 KDESSVRNLLSGCPGLEELRLYRGDDSDIKVFTIEVPSLQRLTIHDNNDGPEFWGYVINA 242
Query: 277 PSLQRF--------DFTGSSPYKRLCGSSLSSVKELSIDAYMGSYS 314
P L+ +F ++P L ++++ V ++I+ ++GS++
Sbjct: 243 PFLKYLLIEELRCPEFCLNAP--ELVEANIAEVTSITIEKFLGSFT 286
>AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 39/286 (13%)
Query: 51 VNNDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDF-STLKIF 109
+ DR+S+LPD +LL ILS + V T +LS +W+ LWK +P+L S D+ S F
Sbjct: 18 MGKDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDSDDYESEHYTF 77
Query: 110 TKFVSK---------LLELRDGSLPLHSFDFERHGSIEYIVHRR--VVDYALSHNVQRLA 158
++ V K L R + + D I + H R V+D+ + + +
Sbjct: 78 SEIVCKSFLSHKAPVLESFRLKFVNFNPVDIGLWVGIAFSRHLRELVLDFYPAELGKGVT 137
Query: 159 MTVEYDYCHVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFH 218
T C +C +L +LKL I S + + +L +LHL F +
Sbjct: 138 FTFPSSLC------TCNTLETLKL--------VLCILVDIPSPVLMKSLRTLHL-EFVRY 182
Query: 219 GSNNGQVEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTM--RTPFGDFHKIELSA 276
+ S L L + + + F I +L +T+ +F ++A
Sbjct: 183 KDESSVRNLLSGCPGLEELRLYRGDDSDIKVFTIEVPSLQRLTIHDNNDGPEFWGYVINA 242
Query: 277 PSLQRF--------DFTGSSPYKRLCGSSLSSVKELSIDAYMGSYS 314
P L+ +F ++P L ++++ V ++I+ ++GS++
Sbjct: 243 PFLKYLLIEELRCPEFCLNAP--ELVEANIAEVTSITIEKFLGSFT 286
>AT4G00315.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:137404-138888 FORWARD
LENGTH=441
Length = 441
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 106/256 (41%), Gaps = 61/256 (23%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKI----- 108
D+ S LPD +L+ +LSF+ ++AV+T +LS RWK LW LP L DF +
Sbjct: 2 DKTSQLPDELLVKVLSFLPTKDAVRTSLLSMRWKSLWMWLPK---LEYDFRHYSVSEGQG 58
Query: 109 FTKFVSKLLELRDGSLP-LHSFDFE-RHGSIEYI----VHRRVVDYALSHNVQRLAMTVE 162
+F++ L L P + S + R+G+I I ++ V NV+ L++ +
Sbjct: 59 LARFIT--LSLLGHKAPAIESLSLKLRYGAIGSIKPEDIYLWVSLAVHDSNVRELSLKL- 115
Query: 163 YDYCHVAR--------IFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVG 214
C A ++ C+S+ LKL + P C LP+L +L L
Sbjct: 116 ---CTFAERPTKLPKSLYKCKSIVILKLK------DEILVDVPRKVC--LPSLKTLFLGR 164
Query: 215 FTFHGSNNGQVEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVD-VTMRTPFGDFHKIE 273
T+ ++ LH L + NC V L D V R + K+
Sbjct: 165 VTYSDEDS-----------LHRL-LSNCPV------------LEDLVVERDRIDNLGKLS 200
Query: 274 LSAPSLQRFDFTGSSP 289
+ SLQR S P
Sbjct: 201 VVVKSLQRLTLKMSCP 216
>AT5G56370.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22836200-22837619
REVERSE LENGTH=421
Length = 421
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 81/183 (44%), Gaps = 28/183 (15%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLP----SLILLSPDFSTLKIF 109
D +S LPD LL ILS + ++ + T +LS RW+ LWK +P SLI + D T F
Sbjct: 2 DSISLLPDDFLLRILSLLPTKDVLNTSVLSKRWRYLWKLVPKLQYSLIDKNADHGT---F 58
Query: 110 TKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYDYCHV- 168
+FV + L L + L S H + + + + V++ +++DY H
Sbjct: 59 VRFVDRSLLLSMAPV-LESL----HLKLGRQCSEVDIGFWVRIAVEKGLCELDFDYEHYK 113
Query: 169 -------ARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSN 221
+F+C +LT LKL K + FP+ C L L +LHL F
Sbjct: 114 TEPCRLPQSLFTCGTLTVLKL----KNVSLKDVQFPV--CFKL--LKTLHLEYVIFLDKE 165
Query: 222 NGQ 224
Q
Sbjct: 166 TPQ 168
>AT5G56370.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22836200-22837619
REVERSE LENGTH=421
Length = 421
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 81/183 (44%), Gaps = 28/183 (15%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLP----SLILLSPDFSTLKIF 109
D +S LPD LL ILS + ++ + T +LS RW+ LWK +P SLI + D T F
Sbjct: 2 DSISLLPDDFLLRILSLLPTKDVLNTSVLSKRWRYLWKLVPKLQYSLIDKNADHGT---F 58
Query: 110 TKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYDYCHV- 168
+FV + L L + L S H + + + + V++ +++DY H
Sbjct: 59 VRFVDRSLLLSMAPV-LESL----HLKLGRQCSEVDIGFWVRIAVEKGLCELDFDYEHYK 113
Query: 169 -------ARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSN 221
+F+C +LT LKL K + FP+ C L L +LHL F
Sbjct: 114 TEPCRLPQSLFTCGTLTVLKL----KNVSLKDVQFPV--CFKL--LKTLHLEYVIFLDKE 165
Query: 222 NGQ 224
Q
Sbjct: 166 TPQ 168
>AT1G78730.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr1:29607840-29609441 REVERSE LENGTH=420
Length = 420
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 131/328 (39%), Gaps = 49/328 (14%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
D L LPD +L + + ++ V+T +LS+ W ++W+S+P L L DF F FV
Sbjct: 22 DWLRKLPDSLLCQVFLNLPTKDVVKTSVLSSTWGNIWRSVPGLDLGYGDFPEYNAFVSFV 81
Query: 114 SKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMT---VEYDYCHVAR 170
L S R+ ++ L++ RL E D +V R
Sbjct: 82 DSFLGFNSES--------------------RLQNFKLNYQYLRLKYEWKWTELDNANVTR 121
Query: 171 IFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQVEPF-S 229
+ T +K V + + S P S ++LP + ++L F +N+ E S
Sbjct: 122 WIN----TVIKRKVEHLHLSDVTFSNPES--VSLPCVKVMYLDMVKF--ANDLAFEMLIS 173
Query: 230 AFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTM----RTPFGDFHKIELSAPSLQRFDFT 285
L SL I+ N + S +L+ T+ + + AP L+
Sbjct: 174 GCPVLESLTIKRSACDNVDYLRVCSQSLLSFTLVGHCNEDMVKEQVVAIDAPRLEDLKLY 233
Query: 286 GSSPYKRLCGSSLSSVKELSIDAYMGSYSPEPPL---------VLLSWLEELTNIKSLTV 336
+ + S VK + ID M + S E ++ ++L ++ +K + +
Sbjct: 234 CHETASFIIKNPASLVK-MDIDI-MFNLSSEQKFDPNDLPKRNMIRNFLLGISGVKEMEI 291
Query: 337 STNTLQVLFLIPDLVNRKLPFLSNLKSL 364
S++TL+V++ +LP NL SL
Sbjct: 292 SSHTLEVIYNYSRC--ERLPVFRNLSSL 317
>AT5G38565.1 | Symbols: | F-box/FBD-like domains containing protein
| chr5:15444571-15446009 REVERSE LENGTH=349
Length = 349
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPD------FSTLK 107
D + LPD VL+ ILSFV + AV T ILS RW+ LW LP L SP +T +
Sbjct: 2 DIFNGLPDDVLVKILSFVPTKVAVSTSILSKRWEFLWMWLPRLDFGSPKTDLLAFLNTCQ 61
Query: 108 IFTKFVSKLLELRDGSLPLHSFDF 131
+ L++ D LPLH F
Sbjct: 62 YDKEEEVGLVDFIDKKLPLHRAPF 85
>AT2G42730.1 | Symbols: | F-box family protein |
chr2:17787454-17791218 REVERSE LENGTH=737
Length = 737
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 149/343 (43%), Gaps = 51/343 (14%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLS----PDFSTLKI- 108
D +S LPD VL ILS + + AV T +LS RWK+++ + +L + P +I
Sbjct: 5 DVISRLPDEVLGRILSLISTKEAVSTSVLSKRWKNMFVLVSNLDIDDRQSVPKTKQNRIE 64
Query: 109 ----FTKFVSKLLELRDGS----LPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLA-- 158
+ FV KLL+ + GS L L S R G+ + + + L H V L
Sbjct: 65 IHRNYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSSRIQSWICN-VLDHGVMDLDVF 123
Query: 159 MTVEYDYCHV-ARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTF 217
+T++ V A IF ++L L++ + +S ++LP L +L L F
Sbjct: 124 ITLKGKSPPVPAMIFKSKTLVKLRVG--------RGFTIKLSQDVSLPLLRTLCLDSVNF 175
Query: 218 HGSNNGQVEPFSAFKKLHSLII--RNCTVKNAQTFCISSTTLVDVTMRTPFGDFHKIELS 275
G +N S L L++ R C T +SS +L + +R F I L
Sbjct: 176 VGGHNVVGTLISRCPVLEELVVEERRCV---DWTCSVSSPSLKRLHIRFDR-KFTSISLD 231
Query: 276 APSLQRFDFTGS--SPYKRLCGSSLSSVK-ELSID---------AYMGSYSPEPPLVLLS 323
AP+L + +G Y + SL + L +D +GS P + +
Sbjct: 232 APNLIYYKHSGYVLGKYPNVKLDSLIEARLNLRMDETRMVGVRNGSLGSI----PADMRN 287
Query: 324 WLEELTNIKSLTVSTNTLQVLFLIPDLVNRKLPFLSNLKSLKV 366
+ + N++ L +S++TL++L+ +++P +L SL +
Sbjct: 288 LINGIRNVRILHLSSHTLELLY----FSCKEMPLFDSLVSLSI 326
>AT5G22610.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:7515217-7516916
FORWARD LENGTH=472
Length = 472
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFSTLKIFTKFV 113
D +S LP+ +L ILS++ ++ V+T +LS RWK +W +P L L S +F F F+
Sbjct: 18 DLISKLPEVLLSQILSYLPTKDIVRTSVLSKRWKSVWLLIPGLDLDSSEFPHYDTFVDFM 77
Query: 114 SKLL 117
++ L
Sbjct: 78 NEFL 81
>AT5G44960.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:18153852-18155391
FORWARD LENGTH=416
Length = 416
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDFST-------L 106
D +++LPD +L IL ++ +++V+T + S RW++LW ++P L L S F+ +
Sbjct: 5 DYINELPDSLLTQILLDLRTKDSVKTSVSSKRWRNLWLNVPGLDLFSLQFTNPHHEEGLI 64
Query: 107 KIFTKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVEYDYC 166
K +F+ R + F+ + + VVD + H + D+
Sbjct: 65 KFMDRFMESNCRSRLQKFMIRYFECNGYRDRFMELIGTVVDCGIQHLYVYMHTCNRVDFI 124
Query: 167 HVARIFSCQSLTSLKLSVHPKQYNTF--STSFPISSCLNLPALTSLHLVGFTFHGSNNGQ 224
I+ ++L SLKL YN + F +S LP L L L+ + G+
Sbjct: 125 R-QNIYKSKTLVSLKL------YNVELKNPDFVVS----LPCLKILKLMKICY-----GE 168
Query: 225 VEPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGDFHK-----IELSAPSL 279
P K +I C V L D+ + PF + + + AP L
Sbjct: 169 DGPLVVEK-----LISGCPV------------LEDLELIKPFDILTQDVILFLRIDAPRL 211
Query: 280 QRFDFTGSSPYKRLCGSSLSSVKELSIDA-----YMGSYSPEPP---LVLLSWLEELTNI 331
+ F S + R+ ++SS+ + I A Y G E P ++ +L ++++
Sbjct: 212 KYMTFY-ESRFDRIMVKNMSSLFSIEIRAKSSFEYGGLLKAEDPRKRAIICDFLTVISSV 270
Query: 332 KSLTVSTNTLQVL 344
+ + +S + L+ L
Sbjct: 271 RHMIISGSILEEL 283
>AT3G59160.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21875023-21876641 FORWARD LENGTH=464
Length = 464
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 151/374 (40%), Gaps = 80/374 (21%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSL----------------- 96
D ++DLPD +L H+LS++ + A T +LS RW+ L +P+L
Sbjct: 13 DMINDLPDALLCHVLSYLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSAYLHRDKRVKNP 72
Query: 97 --------ILLSPDFSTLKI---FTKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRV 145
+L+ D K+ F FV ++L+L+ G+ PL F + + + V
Sbjct: 73 LHEKGLVGFVLTVDDKRKKLSTSFPDFVDRILDLQ-GNSPLDKFSLKMVDDHDPVDPDCV 131
Query: 146 VDY---ALSHNVQRLAMTVEYDYCHV--ARIFSCQSLTSLKLSVHPKQYNTFSTSFPIS- 199
+ L V L + ++ + A+IF ++L L L + PI
Sbjct: 132 APWIHKVLVRGVSDLHLVIDMNEWTSLPAKIFLTETLVKLTLKIRDGP--------PIDV 183
Query: 200 SCLNLPALTSLHLVGFTFHGSNNGQVEPFSAFKKLHSLIIRN--------CTVKNAQ--- 248
++LP L +LHL F + G + S +L L++ + C+V A
Sbjct: 184 KHVHLPKLKTLHLESVMFDEEDIGFSKLLSGCPELEELVLHHIWSCVWTSCSVSVATLKR 243
Query: 249 -TFCISSTTLVDVTMRTPFGDFHKIELSAPSLQRFDFTG--SSPYKRLCGSSLSSVKELS 305
TFC ++ + P + + P+L ++ ++ Y ++ + S+ E
Sbjct: 244 LTFCCNNMKFCGMHEENP----NNVSFDTPNLVYLEYAEVIANNYPKV---NFDSLVEAK 296
Query: 306 IDAYMGSYSPEPPLV------------LLSWLEELTNIKSLTVSTNTLQVLFLIPDLVNR 353
ID +M + + + + + N++ L +S +TL+VL +
Sbjct: 297 IDIWMTNDQLDEVRIRDIYEKNVMVGNATDLIVGIRNVRVLCLSADTLEVL----TYCCK 352
Query: 354 KLPFLSNLKSLKVK 367
++P +NL + ++
Sbjct: 353 QIPIFNNLTHVTIQ 366
>AT3G59150.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21872729-21874422 FORWARD LENGTH=509
Length = 509
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 141/334 (42%), Gaps = 33/334 (9%)
Query: 53 NDRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSL-----ILLSPDFSTLK 107
D +S+LP+ +L ILS++ + A T ILS RW +L S+P L +LL P K
Sbjct: 46 GDVISNLPNDLLCRILSYLSTKEAALTSILSKRWSNLLLSIPILDFDDSVLLKPQKGQRK 105
Query: 108 --IFTKFVSKLLELR-DGSLPLHSFDFE-RHGSIE-YIVHRRVVDYALSHNVQRLAMTVE 162
F FV +LL R + S + + R G +E V + ++ V L++ ++
Sbjct: 106 NVFFKAFVDRLLSQRVETSSHVQRVSLKCRQGGVEPDCVIKWILTTVRDLGVLDLSLCID 165
Query: 163 YDYCHVA-RIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSN 221
+ H+ +F ++L L++ + + FP S + P L SL L F +
Sbjct: 166 FGIFHLPFNVFRSKTLVKLRIGTMIRL-----SQFP--SDVVSPTLNSLVLDLVEFRDGD 218
Query: 222 NGQV-EPFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTPFGDFHK---IELSAP 277
+ + AF L SL + SS TL + R+ + P
Sbjct: 219 KVEFRQILLAFPSLQSLRVHESNKWKFWNGSASSRTLKSLVYRSDDDSSAPKPCVSFDTP 278
Query: 278 SLQRFDFTG--SSPYKRLCGSSLSSVK-ELSIDAYMGSYSPEPPLV----LLSWLEELTN 330
SL D++ + Y+ L SL + +L + A+ P + + + + + N
Sbjct: 279 SLVYLDYSDMVADKYENLKFDSLVEARLDLHLTAFQIMRKPNNIGIVSGDVTTLFKGIRN 338
Query: 331 IKSLTVSTNTLQVLFLIPDLVNRKLPFLSNLKSL 364
+K L +S + L+ L+ K+P +NL +L
Sbjct: 339 VKILCLSPDALEALY----YRGEKIPMFNNLITL 368
>AT2G42730.2 | Symbols: | F-box family protein |
chr2:17789606-17791218 REVERSE LENGTH=457
Length = 457
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 148/341 (43%), Gaps = 47/341 (13%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLS----PDFSTLKI- 108
D +S LPD VL ILS + + AV T +LS RWK+++ + +L + P +I
Sbjct: 5 DVISRLPDEVLGRILSLISTKEAVSTSVLSKRWKNMFVLVSNLDIDDRQSVPKTKQNRIE 64
Query: 109 ----FTKFVSKLLELRDGS----LPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLA-- 158
+ FV KLL+ + GS L L S R G+ + + + L H V L
Sbjct: 65 IHRNYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSSRIQSWICN-VLDHGVMDLDVF 123
Query: 159 MTVEYDYCHV-ARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTF 217
+T++ V A IF ++L L++ + +S ++LP L +L L F
Sbjct: 124 ITLKGKSPPVPAMIFKSKTLVKLRVG--------RGFTIKLSQDVSLPLLRTLCLDSVNF 175
Query: 218 HGSNNGQVEPFSAFKKLHSLII--RNCTVKNAQTFCISSTTLVDVTMRTPFGDFHKIELS 275
G +N S L L++ R C T +SS +L + +R F I L
Sbjct: 176 VGGHNVVGTLISRCPVLEELVVEERRCV---DWTCSVSSPSLKRLHIRFD-RKFTSISLD 231
Query: 276 APSLQRFDFTGSSPYKRLCGSSLSSVKELSIDAYM----------GSYSPEPPLVLLSWL 325
AP+L + +G + L S+ E ++ M GS P + + +
Sbjct: 232 APNLIYYKHSGYV-LGKYPNVKLDSLIEARLNLRMDETRMVGVRNGSLGSIPA-DMRNLI 289
Query: 326 EELTNIKSLTVSTNTLQVLFLIPDLVNRKLPFLSNLKSLKV 366
+ N++ L +S++TL++L+ +++P +L SL +
Sbjct: 290 NGIRNVRILHLSSHTLELLY----FSCKEMPLFDSLVSLSI 326
>AT3G03030.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:682252-683850 FORWARD LENGTH=474
Length = 474
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 36/203 (17%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSPDF---------- 103
D +S LPD V HILSF+ + + T +LS +W++L+ +P+L L ++
Sbjct: 2 DLVSSLPDDVRCHILSFLTTKESALTSVLSKKWRNLFTLVPNLDLDDSEYLHPEETKWER 61
Query: 104 -STLKIFTKFVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAMTVE 162
L F FV ++L L+ G+ P+ F + R + L V L + ++
Sbjct: 62 EEILDSFLDFVERVLSLQ-GNGPIRRFSLRCESGVPPARLNRWLCKVLQRGVADLELIID 120
Query: 163 YD--YCHVARIFSCQSLTSLKLS-----VH--PKQYNTF---STSFPISSCL-------- 202
++ Y +F ++L +L+L +H P TF S ISS +
Sbjct: 121 FEDGYLLPRELFVSETLVNLRLKSEFGCIHWWPGAEGTFLPRLQSLDISSAMVFCDDKLQ 180
Query: 203 ----NLPALTSLHLVGFTFHGSN 221
P + L LVG + S+
Sbjct: 181 KLLPCFPVIEELRLVGMEWIDSH 203
>AT5G02910.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:677120-678907 FORWARD LENGTH=458
Length = 458
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLIL--LSPDFSTLKIFTK 111
D +S LPD +L HILS V ++A++T +LS RW+ +W PSL + D +++
Sbjct: 11 DFISSLPDEILHHILSSVPTKSAIRTSLLSKRWRYVWSETPSLSIDCRRADPNSIDKTLS 70
Query: 112 FVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAM 159
F S + S LH+ R S+ +++A+SHN ++L++
Sbjct: 71 FFSA---PKITSFHLHTTLLNRIDSVN-----GCIEFAISHNAEKLSL 110
>AT5G02910.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:677120-678588 FORWARD LENGTH=353
Length = 353
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 54 DRLSDLPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLIL--LSPDFSTLKIFTK 111
D +S LPD +L HILS V ++A++T +LS RW+ +W PSL + D +++
Sbjct: 11 DFISSLPDEILHHILSSVPTKSAIRTSLLSKRWRYVWSETPSLSIDCRRADPNSIDKTLS 70
Query: 112 FVSKLLELRDGSLPLHSFDFERHGSIEYIVHRRVVDYALSHNVQRLAM 159
F S + S LH+ R S+ +++A+SHN ++L++
Sbjct: 71 FFS---APKITSFHLHTTLLNRIDSVN-----GCIEFAISHNAEKLSL 110
>AT3G44060.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:15824938-15826391 REVERSE LENGTH=427
Length = 427
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 138/324 (42%), Gaps = 37/324 (11%)
Query: 59 LPDCVLLHILSFVKARNAVQTCILSTRWKDLWKSLPSLILLSP----DFSTLKIFTKFVS 114
LPD +L+ IL + + AV T +LS RW+ L+ +L P LK F FV
Sbjct: 4 LPDDLLVQILYLLPTKEAVSTSVLSKRWRTLFTRSDNLDFHDPISGRPEDILKSFNDFVD 63
Query: 115 KLLELRDGSLPLHSFDFERHGSI---EYIVHRRVVDYALSHNVQRLAMTVEYD-----YC 166
L + G H F H I EY V R + AL H V L + + ++ +
Sbjct: 64 SSLAFQGGK---HIKKFSLHTKIKTFEYHVLDRWICNALEHGVSELHLHLMHESWPWLFS 120
Query: 167 HVARIFSCQSLTSLKLSVHPKQYNTFSTSFPISSCLNLPALTSLHLVGFTFHGSNNGQVE 226
+++F+ +L +KLS+ + Y SFP + +LPAL L L F V
Sbjct: 121 IPSKVFNSSTL--VKLSLGSRLY---CPSFPPDT--SLPALKVLLLDSILFRDDQLSNVF 173
Query: 227 PFSAFKKLHSLIIRNCTVKNAQTFCISSTTLVDVTMRTP---FGDFHKIELSAPSLQRFD 283
+A L L I + ISS ++ +++ +G + + L PS+
Sbjct: 174 -LAACPALEDLTIHH----TYHPCVISSKSIKKLSLSVNSGYYGAGYILTLDTPSVVDL- 227
Query: 284 FTGSSPYKRLCGSSLSSVKELSIDAYM---GSYSPEPPLVLLSWLEELTNIKSLTVSTNT 340
+ SP L S+ ++++D + + + + + + E+ N+K+L ++ +T
Sbjct: 228 YYSDSPRHNAPLFHLDSLAKVTLDLHFIENNNREVQNDADVKNLIREICNVKTLHLTCST 287
Query: 341 LQVLFLIPDLVNRKLPFLSNLKSL 364
++V I LP +NL L
Sbjct: 288 VEV---ISVYCKGGLPMFNNLVEL 308