Miyakogusa Predicted Gene
- Lj1g3v1526020.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1526020.1 Non Chatacterized Hit- tr|K3YI09|K3YI09_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si013878,42.86,0.0006,seg,NULL; zf-RING_2,Zinc finger, RING-type;
no description,Zinc finger, RING/FYVE/PHD-type; PUTATIVE,CUFF.27447.1
(368 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G72200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 189 2e-48
AT4G09120.1 | Symbols: | RING/U-box superfamily protein | chr4:... 173 2e-43
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 171 6e-43
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 166 3e-41
AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive... 164 1e-40
AT2G35000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 161 6e-40
AT1G22500.1 | Symbols: | RING/U-box superfamily protein | chr1:... 160 1e-39
AT4G09130.1 | Symbols: | RING/U-box superfamily protein | chr4:... 158 7e-39
AT2G34990.1 | Symbols: | RING/U-box superfamily protein | chr2:... 147 9e-36
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 143 1e-34
AT4G09110.1 | Symbols: | RING/U-box superfamily protein | chr4:... 139 3e-33
AT4G09100.1 | Symbols: | RING/U-box superfamily protein | chr4:... 112 3e-25
AT5G46650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 109 4e-24
AT4G17920.1 | Symbols: | RING/U-box superfamily protein | chr4:... 108 4e-24
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 104 1e-22
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 97 2e-20
AT1G23980.1 | Symbols: | RING/U-box superfamily protein | chr1:... 94 2e-19
AT4G15975.1 | Symbols: | RING/U-box superfamily protein | chr4:... 93 4e-19
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 92 5e-19
AT4G30400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 92 7e-19
AT4G28890.1 | Symbols: | RING/U-box superfamily protein | chr4:... 89 3e-18
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 88 9e-18
AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein | ... 87 1e-17
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 87 2e-17
AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zi... 87 2e-17
AT5G43420.1 | Symbols: | RING/U-box superfamily protein | chr5:... 87 2e-17
AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 | chr3:... 86 3e-17
AT2G42360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 84 1e-16
AT4G33565.1 | Symbols: | RING/U-box superfamily protein | chr4:... 84 2e-16
AT2G35420.1 | Symbols: | RING/U-box superfamily protein | chr2:... 84 2e-16
AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily p... 82 8e-16
AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 | chr3:... 81 1e-15
AT5G40250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 81 1e-15
AT3G03550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 80 2e-15
AT1G72220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 80 2e-15
AT2G47560.1 | Symbols: | RING/U-box superfamily protein | chr2:... 80 2e-15
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 80 3e-15
AT5G17600.1 | Symbols: | RING/U-box superfamily protein | chr5:... 80 3e-15
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 79 5e-15
AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVE... 79 7e-15
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 78 1e-14
AT2G35910.1 | Symbols: | RING/U-box superfamily protein | chr2:... 78 1e-14
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 77 2e-14
AT3G18930.2 | Symbols: | RING/U-box superfamily protein | chr3:... 77 3e-14
AT3G18930.1 | Symbols: | RING/U-box superfamily protein | chr3:... 77 3e-14
AT2G25410.1 | Symbols: | RING/U-box superfamily protein | chr2:... 76 4e-14
AT5G01880.1 | Symbols: | RING/U-box superfamily protein | chr5:... 75 9e-14
AT3G10910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 74 2e-13
AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein | ... 74 2e-13
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 73 3e-13
AT5G05280.1 | Symbols: | RING/U-box superfamily protein | chr5:... 71 9e-13
AT1G53820.1 | Symbols: | RING/U-box superfamily protein | chr1:... 71 1e-12
AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 70 2e-12
AT2G46160.1 | Symbols: | RING/U-box superfamily protein | chr2:... 70 2e-12
AT3G61550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 70 2e-12
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 70 3e-12
AT1G49230.1 | Symbols: | RING/U-box superfamily protein | chr1:... 70 3e-12
AT5G47610.1 | Symbols: | RING/U-box superfamily protein | chr5:... 70 3e-12
AT1G49200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 69 5e-12
AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein | c... 69 6e-12
AT2G46493.1 | Symbols: | RING/U-box superfamily protein | chr2:... 69 6e-12
AT2G46495.1 | Symbols: | RING/U-box superfamily protein | chr2:... 68 8e-12
AT1G49210.1 | Symbols: | RING/U-box superfamily protein | chr1:... 68 8e-12
AT5G06490.1 | Symbols: | RING/U-box superfamily protein | chr5:... 68 1e-11
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:... 67 2e-11
AT1G49220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 67 2e-11
AT4G30370.1 | Symbols: | RING/U-box superfamily protein | chr4:... 67 2e-11
AT1G35625.1 | Symbols: | RING/U-box superfamily protein | chr1:... 67 2e-11
AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B | chr4:1685223... 67 2e-11
AT4G17245.1 | Symbols: | RING/U-box superfamily protein | chr4:... 66 3e-11
AT1G20823.1 | Symbols: | RING/U-box superfamily protein | chr1:... 66 4e-11
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 66 4e-11
AT1G28040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 66 5e-11
AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 65 6e-11
AT2G18670.1 | Symbols: | RING/U-box superfamily protein | chr2:... 65 6e-11
AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 | ch... 65 7e-11
AT2G46494.1 | Symbols: | RING/U-box superfamily protein | chr2:... 65 7e-11
AT1G74410.1 | Symbols: | RING/U-box superfamily protein | chr1:... 65 9e-11
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 65 1e-10
AT5G07040.1 | Symbols: | RING/U-box superfamily protein | chr5:... 64 1e-10
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 64 1e-10
AT5G66160.2 | Symbols: RMR1 | receptor homology region transmemb... 64 2e-10
AT5G42200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 64 2e-10
AT1G53010.1 | Symbols: | RING/U-box superfamily protein | chr1:... 63 3e-10
AT3G18773.1 | Symbols: | RING/U-box superfamily protein | chr3:... 63 3e-10
AT2G34000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 62 5e-10
AT5G36001.1 | Symbols: | RING/U-box superfamily protein | chr5:... 62 5e-10
AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B | chr4:6906066... 62 9e-10
AT3G19140.1 | Symbols: DNF | RING/U-box superfamily protein | ch... 62 9e-10
AT2G44578.1 | Symbols: | RING/U-box superfamily protein | chr2:... 61 1e-09
AT3G11110.1 | Symbols: | RING/U-box superfamily protein | chr3:... 61 1e-09
AT5G41400.1 | Symbols: | RING/U-box superfamily protein | chr5:... 61 2e-09
AT5G66070.1 | Symbols: | RING/U-box superfamily protein | chr5:... 60 2e-09
AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 60 2e-09
AT5G66070.2 | Symbols: | RING/U-box superfamily protein | chr5:... 60 2e-09
AT3G20395.1 | Symbols: | RING/U-box superfamily protein | chr3:... 59 4e-09
AT2G28920.1 | Symbols: | RING/U-box superfamily protein | chr2:... 59 4e-09
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 59 5e-09
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 59 5e-09
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 59 5e-09
AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 59 5e-09
AT3G60966.1 | Symbols: | RING/U-box superfamily protein | chr3:... 59 6e-09
AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A | chr4:6907777... 59 7e-09
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 59 7e-09
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 59 7e-09
AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 58 8e-09
AT2G37580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 58 9e-09
AT4G24015.1 | Symbols: | RING/U-box superfamily protein | chr4:... 58 1e-08
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 58 1e-08
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 58 1e-08
AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 58 1e-08
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 57 1e-08
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 57 2e-08
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 57 2e-08
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 57 2e-08
AT5G41450.1 | Symbols: | RING/U-box superfamily protein | chr5:... 57 2e-08
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 2e-08
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 2e-08
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 57 2e-08
AT2G44581.1 | Symbols: | RING/U-box superfamily protein | chr2:... 56 3e-08
AT3G02340.1 | Symbols: | RING/U-box superfamily protein | chr3:... 56 4e-08
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 56 4e-08
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 56 4e-08
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 55 5e-08
AT1G63840.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 6e-08
AT3G13430.3 | Symbols: | RING/U-box superfamily protein | chr3:... 55 7e-08
AT3G13430.2 | Symbols: | RING/U-box superfamily protein | chr3:... 55 7e-08
AT3G13430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 7e-08
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 55 7e-08
AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 8e-08
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 9e-08
AT1G04790.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 1e-07
AT3G56580.3 | Symbols: | RING/U-box superfamily protein | chr3:... 55 1e-07
AT3G56580.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 1e-07
AT3G56580.2 | Symbols: | RING/U-box superfamily protein | chr3:... 55 1e-07
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 55 1e-07
AT3G30460.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 1e-07
AT5G41430.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 1e-07
AT2G17730.2 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 54 1e-07
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 2e-07
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 54 2e-07
AT3G61460.1 | Symbols: BRH1 | brassinosteroid-responsive RING-H2... 54 2e-07
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 54 2e-07
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 54 2e-07
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 54 2e-07
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 2e-07
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 54 3e-07
AT1G53190.2 | Symbols: | RING/U-box superfamily protein | chr1:... 53 3e-07
AT1G53190.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 3e-07
AT3G43430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 53 3e-07
AT3G10815.1 | Symbols: | RING/U-box superfamily protein | chr3:... 53 3e-07
AT3G60080.1 | Symbols: | RING/U-box superfamily protein | chr3:... 53 4e-07
AT1G51930.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 4e-07
AT3G47180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 53 4e-07
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 52 6e-07
AT2G15580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 51 1e-06
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 51 1e-06
AT5G20885.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 1e-06
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 1e-06
AT5G15820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 2e-06
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 51 2e-06
AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein | c... 50 2e-06
AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 50 2e-06
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 50 3e-06
AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 | chr5:... 50 3e-06
AT4G38140.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 3e-06
AT3G16090.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 4e-06
AT5G37200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 4e-06
AT1G65040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 4e-06
AT5G41350.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 4e-06
AT5G37270.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 6e-06
AT1G65040.3 | Symbols: | RING/U-box superfamily protein | chr1:... 49 6e-06
AT1G70910.1 | Symbols: DEP | RING/U-box superfamily protein | ch... 49 6e-06
AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A | chr1:5193703... 49 7e-06
AT5G37250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 7e-06
AT5G37230.1 | Symbols: | RING/U-box superfamily protein | chr5:... 48 9e-06
>AT1G72200.1 | Symbols: | RING/U-box superfamily protein |
chr1:27169935-27171149 REVERSE LENGTH=404
Length = 404
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/306 (40%), Positives = 168/306 (54%), Gaps = 30/306 (9%)
Query: 57 KFDKSMAXXXXXXXXXXXMLGFLSIYTRQCTERGIRGRFDLAFPIGGSNW------RHRG 110
+FD +MA LGF S+Y R+C ER + G D P NW + RG
Sbjct: 58 RFDPTMAILMIVLVSVFFFLGFFSVYIRRCLER-VMG-MDYGNPNDAGNWLATNRQQARG 115
Query: 111 LDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAW 170
LD II++FPTF YS VK L+IG+ LEC+VCLNEF D ETLRLIPKC HVFH C+DAW
Sbjct: 116 LDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAW 175
Query: 171 LVNQSTCPVCRANLLQGDAATTFVAVQIPDPEGHGSTTPVPGSGDPSPNRVDNSSNNQSP 230
L + +TCP+CRA+L+ + V++QIP G PGS DP+ +R+ + + +
Sbjct: 176 LRSHTTCPLCRADLIPV-PGESIVSIQIP-----GLVNDPPGS-DPNGDRIRSLGSPDAR 228
Query: 231 KVGSDLV--NQNRPVRSRSTGFR--SWFPRSHSTGHSLGEDWERFTLRLPEEVRNRLVNS 286
+ S + NQ+ P RS STG+ F S TG E+ +RFTLRLP+++ N+LVN
Sbjct: 229 LIESVALTCNQSMPRRSMSTGWNLAGMFTNSDRTGQH-SENLDRFTLRLPQDIHNKLVNP 287
Query: 287 TLNRTTSCGATFMRVSSGRSGYRARSVGRSPIGGSNERSD-------RRFFWTPPFVSRA 339
L++ +V S GYR S+G ER D R F TPP+ + +
Sbjct: 288 NLSKVH---VALPQVMSSTRGYRTGSLGSERNYFYYERFDQDGRLDRRPFSITPPYRTSS 344
Query: 340 GSTRSP 345
+ SP
Sbjct: 345 INHMSP 350
>AT4G09120.1 | Symbols: | RING/U-box superfamily protein |
chr4:5813998-5815035 FORWARD LENGTH=345
Length = 345
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/274 (41%), Positives = 143/274 (52%), Gaps = 45/274 (16%)
Query: 109 RGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVD 168
RGL+ E+I+SFPTF+YS VKGLKIG+ +ECA+CL+EF D ETLR +P CSH FHA C+D
Sbjct: 93 RGLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCID 152
Query: 169 AWLVNQSTCPVCRANLLQGDAATTFVAVQIPDPEGHGSTTPVPGSGDPSPNRVDNSSNNQ 228
WL + STCPVCRANL + PG P N + Q
Sbjct: 153 VWLSSWSTCPVCRANL-----------------------SLKPGESYPYLNMDVETGGVQ 189
Query: 229 SPKVGSDLVNQNRPVRSRSTGFRS-------WFPRSHSTGHS----LGEDWERFTLRLPE 277
L + RSRSTG S + PRSHSTGHS LGE+ +RFTL+LPE
Sbjct: 190 KLPNERSLTGNSVTTRSRSTGLLSSWRMAEIFVPRSHSTGHSLVQQLGENLDRFTLQLPE 249
Query: 278 EVRNRLVNSTLNRTTSCGATFMRVSSGRSGYRARSVGRSPIGGSNERSDRRFFWTPPFVS 337
EV+ +LV+ L R + + S R GYR+ SVG G S R R + F S
Sbjct: 250 EVQRQLVSLNLIRRSH--IVLPQAVSSRQGYRSGSVGSERGGFSQGRQTHRRALSMSF-S 306
Query: 338 RAGSTRSPKPNKAMDD--------MGERSSDRLF 363
+ T S + M+D GERS +RL
Sbjct: 307 FSFQTASVRSIHDMNDQAQAKDKYFGERSFERLM 340
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/299 (39%), Positives = 151/299 (50%), Gaps = 42/299 (14%)
Query: 57 KFDKSMAXXXXXXXXXXXMLGFLSIYTRQCTERGIRGRFDLAFPIGGS------NWRHRG 110
+ +MA +GF SIY R C+ G P GG+ N RG
Sbjct: 44 RLSPAMAVIVVILIAALFFMGFFSIYFRHCSGVPDAG----VSPAGGARSRATVNAAARG 99
Query: 111 LDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAW 170
LD ++++FPTF+YS VK K+G+ LECA+CLNEF D ETLRL+PKC HVFH C+DAW
Sbjct: 100 LDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAW 159
Query: 171 LVNQSTCPVCRANLLQGDAATTFVAVQIPDPE---GHGSTTPVPGSGDPSPNRVDNSS-- 225
L TCPVCRANL + A V +P+ P P P P ++ S
Sbjct: 160 LEAHVTCPVCRANLAEQVAEGESVEPGGTEPDLELQQVVVNPEPVVTAPVPEQLVTSEVD 219
Query: 226 NNQSPKVGSDLVNQNRPVRSRSTGFRSWFPRSHSTGHSL---GEDWERFTLRLPEEVRNR 282
+ + P V DL R F RSH+TGHS+ GE ERFTLRLPE+VR R
Sbjct: 220 SRRLPGVPVDLK-------------RVKFSRSHTTGHSVVQPGECTERFTLRLPEDVRKR 266
Query: 283 LVNS-TLNRTTSCGATFMRVSSGRSGYRARSVGRSPIGGSNERSDRRFF-WTPPFVSRA 339
++ LNRT S + + G S R + PI S RSDR F TP F+ R+
Sbjct: 267 IMKDWKLNRTNS----LLVLPRGGSSRRGK-----PIDRSRARSDRWLFRKTPSFLWRS 316
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/237 (44%), Positives = 131/237 (55%), Gaps = 43/237 (18%)
Query: 109 RGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVD 168
RGL ++I+SFP+F+YS VKGLKIG+ +ECA+CLNEF D ETLRL+P CSH FHA C+D
Sbjct: 98 RGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCID 157
Query: 169 AWLVNQSTCPVCRANLLQGDAATTFVAVQIPDP-EGHGSTTPVPGSGDPSPNRVDNSSNN 227
WL ++STCPVCRA+L P P S P D ++N +
Sbjct: 158 VWLSSRSTCPVCRASL-------------PPKPGSDQNSLYPFIRPHDNQDMDLENVTAR 204
Query: 228 ----QSPKV-------GSDLVNQNRPVRSRSTGFRSW------FPRSHSTGHSL---GED 267
+SP V S+ N P RSRSTG +W FPRSHSTGHSL E+
Sbjct: 205 RSVLESPDVRLLDRLSWSNNTGANTPPRSRSTGLSNWRITELLFPRSHSTGHSLVPRVEN 264
Query: 268 WERFTLRLPEEVRNRLVNSTLNRTTSCGATFMRVSSGRSGYRARSVGRSPIGGSNER 324
+RFTL+LPEEVR +L S T + S R GYR+ SVG G E+
Sbjct: 265 LDRFTLQLPEEVRRQL---------SHMKTLPQARSSREGYRSGSVGSERRGKGKEK 312
>AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive 1
| chr5:9684119-9685225 FORWARD LENGTH=368
Length = 368
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 145/290 (50%), Gaps = 61/290 (21%)
Query: 61 SMAXXXXXXXXXXXMLGFLSIYTRQCTERGIRGRFDLAF-PIGGSNWR------HRGLDP 113
+MA +GF ++Y R CT G D + P GG+ R RGLD
Sbjct: 44 AMAVVVVVVIAALFFMGFFTVYIRHCT-----GAVDGSVTPAGGARRRVTNATVARGLDA 98
Query: 114 EIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVN 173
E I++FPTFVYS VK KIG+ LECA+CLNEF D ETLRL+PKC HVFH C+ AWL
Sbjct: 99 ETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQG 158
Query: 174 QSTCPVCRANLLQGDAATTFVAVQIPDPEGHGSTTPVPGSGDPSPNRVDNSSNNQSPKVG 233
TCPVCR NL A Q P+PE T D + QS V
Sbjct: 159 HVTCPVCRTNL----------AEQTPEPEVVVET--------------DLEAQQQS-AVP 193
Query: 234 SDLVNQNRPVRSRSTGFRSWFPRSHSTGHSL---GEDWERFTLRLPEEVRNRLV-NSTLN 289
+V R FPRSH+TGHS+ GE +RFTLR+PEE+R +++ N LN
Sbjct: 194 VPVVELP----------RVKFPRSHTTGHSVVLPGESTDRFTLRVPEELRKKIMANWKLN 243
Query: 290 RTTSCGATFMRVSSGRSGYRARSVGRSPIGGSNERSDRRFF-WTPPFVSR 338
R+ S R S RSG + + S +SDR F TP F+ R
Sbjct: 244 RSNSV-FVLPRGGSSRSGKQ--------VDRSRAKSDRWLFRKTPSFLWR 284
>AT2G35000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14751809-14752945 REVERSE LENGTH=378
Length = 378
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/193 (47%), Positives = 119/193 (61%), Gaps = 23/193 (11%)
Query: 109 RGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVD 168
RGLD E I++FPTF+YS VK ++IG+ +ECAVCL EF D ETLRL+P C HVFHA+CVD
Sbjct: 105 RGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVD 164
Query: 169 AWLVNQSTCPVCRANLL---QGDAATTFVAVQIPDPEGHGSTTP--VPGSGDPSPNRVDN 223
WL STCP+CRA+L+ QGD + E + T P + S DP V
Sbjct: 165 VWLSEHSTCPLCRADLVLNQQGDDDDS--------TESYSGTDPGTISSSTDPERGMVLE 216
Query: 224 SSNNQSPKVGSDLVNQNRPVRSRSTGFRSW------FPRSHSTGHSLGE---DWERFTLR 274
SS+ + N N RS+STG SW FPRSHSTGHSL + + +RFTLR
Sbjct: 217 SSDAHLLDAVT-WSNSNITPRSKSTGLSSWQITGILFPRSHSTGHSLIQPAGNLDRFTLR 275
Query: 275 LPEEVRNRLVNST 287
LP++VR +L+ ++
Sbjct: 276 LPDDVRRQLMKTS 288
>AT1G22500.1 | Symbols: | RING/U-box superfamily protein |
chr1:7949581-7950726 FORWARD LENGTH=381
Length = 381
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 160/291 (54%), Gaps = 35/291 (12%)
Query: 76 LGFLSIYTRQCTERGIRGRFDLAFPIGGS--NWRHR------GLDPEIIDSFPTFVYSAV 127
LG +S+Y R+C + L GG NW + GLD +I++FPTF YS V
Sbjct: 53 LGCISVYMRRCLQHA------LGMDSGGGPGNWLNVRQTTEPGLDASVIETFPTFPYSTV 106
Query: 128 KGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANL--L 185
K L+IG+ LEC VCLNEF D ETLRLIP+C HVFH C+DAWL +Q+TCP+CRANL +
Sbjct: 107 KTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVPV 166
Query: 186 QGDAATTFVAVQIPDPEGHGSTTPVPGSGDPSPNRVDNSSNNQSPKVGSDLVNQNRPVRS 245
G++ ++ + + + TP+ D + RV S + + + NQ+ P +S
Sbjct: 167 PGESVSSEIPGLARETGQNSLRTPI----DDNRKRVLTSPDERLIDSVAWTGNQSMPRKS 222
Query: 246 RSTGFRSWFPRSHSTGHSLG---EDWERFTLRLPEEVRNRLVNSTLNRTTSCGATFM-RV 301
STG++ +S S G E+ +R+TLRLP+E+ ++LVNS+L + S G + +
Sbjct: 223 MSTGWK--LAELYSPASSPGQPEENLDRYTLRLPQEIHDQLVNSSLGKQGSKGQLALPQE 280
Query: 302 SSGRSGYRARSVGRSPIGGSNERSD-------RRFFWTPPFVSRAGSTRSP 345
S G+R S+G ER D R F TPP+ +R S +SP
Sbjct: 281 RSSVRGFRTGSLGTEKNYFYFERFDQDGRLDRRPFSITPPYHTR--SIQSP 329
>AT4G09130.1 | Symbols: | RING/U-box superfamily protein |
chr4:5815849-5816922 FORWARD LENGTH=357
Length = 357
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/278 (41%), Positives = 143/278 (51%), Gaps = 37/278 (13%)
Query: 109 RGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVD 168
RG+D ++I+SFP F+YS VK KIG +ECA+CL EF D E LR +P CSH FHA C+D
Sbjct: 90 RGIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCID 149
Query: 169 AWLVNQSTCPVCRAN--LLQGDAATTFVAVQIPDPEGHGSTTPVPGSGDPSPNRVDNSSN 226
WL ++STCPVCRAN L GD+ P P T SP D S
Sbjct: 150 EWLSSRSTCPVCRANLSLKSGDS--------FPHPSMDVETGNAQRGVQESP---DERSL 198
Query: 227 NQSPKVGSDLVNQNRPVRSRSTGFRS-------WFPRSHSTGHSL---GEDWERFTLRLP 276
S ++ N P RSRSTG S + PRSHSTGHSL ++ +RFTL+LP
Sbjct: 199 TGSSVTCNNNANYTTP-RSRSTGLLSSWHVPELFLPRSHSTGHSLVQPCQNIDRFTLQLP 257
Query: 277 EEVRNRLVNSTLNRTTSCGATFMRVSSGRSGYRARSVGRSPIGGSNERSD-RRFFWTP-P 334
EEV+ +LV +LN R S R GYR+ SVG G S R RR T
Sbjct: 258 EEVQRQLV--SLNLIKRSHIALPRARSSRQGYRSGSVGNERTGFSQGRQTLRRAISTSLS 315
Query: 335 FVSRAGSTRSP--------KPNKAMD-DMGERSSDRLF 363
F + RS + ++A D D GERS RL
Sbjct: 316 FSFQPAPVRSTLDRDNLMRETSQANDKDFGERSFQRLM 353
>AT2G34990.1 | Symbols: | RING/U-box superfamily protein |
chr2:14750260-14751168 REVERSE LENGTH=302
Length = 302
Score = 147 bits (372), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 110/190 (57%), Gaps = 31/190 (16%)
Query: 109 RGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVD 168
RGLD II+SFPTF+YS VK +IG +ECAVC+ EF DHETLRL+P+C HVFHA+CV
Sbjct: 66 RGLDEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVS 125
Query: 169 AWLVNQSTCPVCRANLLQGDAATTFVAVQIPDPEGHGSTTPVPGSGDPSPNRVDNSSNNQ 228
WL + STCP+CR +L +++ +P P+ V+ S N
Sbjct: 126 VWLSDHSTCPLCRVDLCLQPGERSYL--------------------NPEPDLVE--STNS 163
Query: 229 SPKVGSDLVNQNRPVRSRSTGF------RSWFPRSHSTGHSLGE---DWERFTLRLPEEV 279
G N+NRP RS ST + RSHSTGHS+ + + +RFTLRLPEEV
Sbjct: 164 HLFDGVTWTNRNRPSRSWSTRLSQCRVSQILISRSHSTGHSVVQPLDNLDRFTLRLPEEV 223
Query: 280 RNRLVNSTLN 289
R +L T++
Sbjct: 224 RRQLTKKTVD 233
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/290 (36%), Positives = 145/290 (50%), Gaps = 46/290 (15%)
Query: 75 MLGFLSIYTRQC-------TERGIRGRFDLAFPIGGSNWRHRGLDPEIIDSFPTFVYSAV 127
+ G LS+Y R C + R R R + GS+ R GLD +++SFP F YS+V
Sbjct: 59 LTGLLSVYIRHCARSNPDSSTRYFRNRAN-----DGSS-RRGGLDNAVVESFPVFAYSSV 112
Query: 128 KGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQG 187
K KIG LECA+CLNE DHET+RL+P C+H+FH +C+D WL + +TCPVCR+NL
Sbjct: 113 KESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTAK 172
Query: 188 DAATTFVAVQIPDPEGHGSTTPVPGSGDPSPNRVDNSSNNQSPKVGSDLVNQNRPVRSRS 247
P E G P+ D ++ +S +R + S
Sbjct: 173 SNK--------PGDEDDG--VPLAAMRDHVVVDIETVEVAKS---------HHRRLSSEI 213
Query: 248 TGFRSWFPRSHSTGHSL---GEDWERFTLRLPEEVRNRLVNST---LNRTTSCGATFMRV 301
+G FPRS+STGHS+ + ERFTLRLP++V+ RL+ L RT S
Sbjct: 214 SG---KFPRSNSTGHSMDRFSDGTERFTLRLPDDVKMRLMAVKGRRLKRTRSFDVDLTAE 270
Query: 302 SSGRSGYR-ARSVGRSPIGGSNERSDRRFFWTPPFVSR--AGSTRSPKPN 348
RSG + ++G G DR + FVS+ +GS RS K N
Sbjct: 271 HYCRSGEESSNTIGSGAKSGRVNWPDR--WGLTLFVSKSNSGSVRSQKSN 318
>AT4G09110.1 | Symbols: | RING/U-box superfamily protein |
chr4:5812488-5813396 FORWARD LENGTH=302
Length = 302
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 103/202 (50%), Gaps = 52/202 (25%)
Query: 109 RGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVD 168
RGL+ E+++SFP F+YS VKGLKIG+ +ECA+CL+EF D ETLR +P CSH FHA C+D
Sbjct: 93 RGLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCID 152
Query: 169 AWLVNQSTCPVCRANLLQGDAATTFVAVQIPDPEGHGSTTPVPGSGDPSPNRVDNSSNNQ 228
WL +QSTCP CRANL + PG P P + N Q
Sbjct: 153 VWLSSQSTCPACRANL-----------------------SLKPGESYPYPITDLETGNEQ 189
Query: 229 SPKVGSDLVNQNRPVRSRSTGFRSWFPRSHSTGHSLGEDWERFTLRLPEEVRNRLVNSTL 288
R + LG + +RFTL+LPEE++ +LV+ L
Sbjct: 190 ---------------------------RDEHSLLQLGTNLDRFTLQLPEEMQRQLVSLNL 222
Query: 289 NRTTSCGATFMRVSSGRSGYRA 310
RT+ T R S R GYR+
Sbjct: 223 IRTS--NMTLPRAMSSRQGYRS 242
>AT4G09100.1 | Symbols: | RING/U-box superfamily protein |
chr4:5811256-5811654 FORWARD LENGTH=132
Length = 132
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 60/77 (77%)
Query: 109 RGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVD 168
RGLD E I SFP+FVY+ +G++ G LEC VCLNEF+D ETLRL+P C HVFHA+CVD
Sbjct: 55 RGLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVD 114
Query: 169 AWLVNQSTCPVCRANLL 185
WL + STCP+CRA ++
Sbjct: 115 IWLSHSSTCPICRAKVV 131
>AT5G46650.1 | Symbols: | RING/U-box superfamily protein |
chr5:18930443-18931312 FORWARD LENGTH=289
Length = 289
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 102/218 (46%), Gaps = 21/218 (9%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRD-HETLRLIPKCSHVFHAECVD 168
GL+P II S+P F +S+VK L+ + LECA+CL EF + H LRL+ C HVFH EC+D
Sbjct: 85 GLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQECID 144
Query: 169 AWLVNQSTCPVCRANL-LQGDAATTFVAVQIPDPEGHGSTTPVPGSGDPSPNRVDNSSNN 227
WL + TCPVCR NL + +++ H + S SS N
Sbjct: 145 QWLESNKTCPVCRRNLDPNAPENIKELIIEVIQENAHENRDQEQTSTSNEVMLSRQSSGN 204
Query: 228 QSPKVGSDLVNQNRPVRSRSTGFRSWFPRSHSTGHSLG----EDWERFTLRLPEEVRNRL 283
K+ + F RS +TGHS+ E+ +R+TLRLP+ V+ ++
Sbjct: 205 NERKIET---------------LPDKFSRSKTTGHSIVRNKPEEEDRYTLRLPDHVKIKV 249
Query: 284 VNSTLNRTTSCGATFMRVSSGRSGYRARSVGRSPIGGS 321
N T +F + R G G+S + S
Sbjct: 250 TRRHNNNQTESCISFGELVRNREGRFGEVSGQSLVPES 287
>AT4G17920.1 | Symbols: | RING/U-box superfamily protein |
chr4:9963221-9964090 REVERSE LENGTH=289
Length = 289
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 108/215 (50%), Gaps = 24/215 (11%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
GL+ II+SFPTF YS+VK L+ + LECA+CL EF LRL+ C HVFH EC+D
Sbjct: 81 GLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQECIDL 140
Query: 170 WLVNQSTCPVCRANL----LQGDAATTFVAVQIPDPEGHGSTTPVPGSGDPSPNRVDN-S 224
W + TCPVCR +L + T + I + + ++D
Sbjct: 141 WFESHRTCPVCRRDLDPPPPPENTKPTVDEMIIDVIQETSDDEEDDHHRQQTTTQIDTWP 200
Query: 225 SNNQSPKVGSDLVNQNRPVRSRSTGFRSWFPRSHSTGHSLG----EDWERFTLRLPEEVR 280
S+ Q+ + + QN P + F RSHSTGHS+ E+ +++TLRLPE V+
Sbjct: 201 SSGQTSSIKKE---QNLPEK---------FSRSHSTGHSIVRNKPEEEDKYTLRLPEHVK 248
Query: 281 NRLVNSTLNRTTSCGATFMRVSSGRSGYRARSVGR 315
+ V ++T SC TF + R GY R G
Sbjct: 249 IK-VTRGHSQTESC-VTFAELIRNR-GYDHRRFGE 280
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 62/98 (63%), Gaps = 7/98 (7%)
Query: 90 GIRGRFDLAFPIGGSNWRHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDH 149
++G+ F N G+D +ID+ P F Y ++ GLKI + +C VCL EF
Sbjct: 84 ALQGQLQQLF-----NLHDSGVDQSLIDTLPVFHYKSIVGLKI--SPFDCPVCLCEFETE 136
Query: 150 ETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQG 187
+ LRL+PKCSH FH EC+D WL++ STCP+CR+NLL G
Sbjct: 137 DKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSG 174
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 107 RHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAEC 166
R GLD + I+S P F +SA+KGLK G LEC+VCL++F D E LRL+PKC H FH C
Sbjct: 95 RFSGLDKKAIESLPFFRFSALKGLKQG---LECSVCLSKFEDVEILRLLPKCRHAFHIGC 151
Query: 167 VDAWLVNQSTCPVCR 181
+D WL +TCP+CR
Sbjct: 152 IDQWLEQHATCPLCR 166
>AT1G23980.1 | Symbols: | RING/U-box superfamily protein |
chr1:8484879-8485988 REVERSE LENGTH=369
Length = 369
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
GLD +ID+ P F+Y +KG K +CAVCL EF + + LRL+P CSH FH +C+D
Sbjct: 118 GLDQALIDALPVFLYKEIKGTK---EPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDT 174
Query: 170 WLVNQSTCPVCRANLL 185
WL++ STCP+CR L
Sbjct: 175 WLLSNSTCPLCRGTLF 190
>AT4G15975.1 | Symbols: | RING/U-box superfamily protein |
chr4:9052313-9053020 FORWARD LENGTH=235
Length = 235
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 83/156 (53%), Gaps = 26/156 (16%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
GL+P II S P F +SAV L +EC+VCL+EF+D+E+ R++P C H FH +C+D
Sbjct: 51 GLNPSIIKSLPIFTFSAVTAL----FAMECSVCLSEFKDNESGRVMPNCKHTFHVDCIDM 106
Query: 170 WLVNQSTCPVCRANL--LQGDAATTF--VAVQIPDP--------EGHGST-TPVPGSGDP 216
W + S+CP+CR+ + G +T VA+ I DP EG +T VP
Sbjct: 107 WFHSHSSCPLCRSLIEPFAGGVKSTMDEVAISISDPVYGDTNHHEGTETTGDSVPEDSQR 166
Query: 217 SPNRVDNSSNNQSPKVGSDLVNQNRPVRSRSTGFRS 252
P ++ S N ++ +DL SRS FRS
Sbjct: 167 KPAAIEISQRNLG-EIENDL--------SRSHSFRS 193
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 61/112 (54%), Gaps = 10/112 (8%)
Query: 107 RHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAEC 166
++ G+D +I+S P F + A+ G K G LECAVCL F E LRL+PKC H FH EC
Sbjct: 63 KNSGIDRSVIESLPVFRFGALSGHKDG---LECAVCLARFEPTEVLRLLPKCKHAFHVEC 119
Query: 167 VDAWLVNQSTCPVCRAN------LLQGDAATTFVAVQIPDPEGHGSTTPVPG 212
VD WL STCP+CR LL GD + F +Q E + PG
Sbjct: 120 VDTWLDAHSTCPLCRYRVDPEDILLIGDCNSWF-ELQFSKDESNSVNNNPPG 170
>AT4G30400.1 | Symbols: | RING/U-box superfamily protein |
chr4:14867068-14868486 FORWARD LENGTH=472
Length = 472
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 7/92 (7%)
Query: 90 GIRGRFDLAFPIGGSNWRHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDH 149
++G+ F + S G+D ID+ P F Y ++ GLK +CAVCL EF
Sbjct: 92 ALQGQLQQLFHLHDS-----GVDQSFIDTLPVFHYKSIIGLK--NYPFDCAVCLCEFETE 144
Query: 150 ETLRLIPKCSHVFHAECVDAWLVNQSTCPVCR 181
+ LRL+PKCSH FH +C+D WL++ STCP+CR
Sbjct: 145 DKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 176
>AT4G28890.1 | Symbols: | RING/U-box superfamily protein |
chr4:14256437-14257735 REVERSE LENGTH=432
Length = 432
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 103 GSNWRHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVF 162
S+ R GLD I+S P F +SA+KG K G L+C+VCL++F E LRL+PKC H F
Sbjct: 90 ASSDRFSGLDKTAIESLPLFRFSALKGSKQG---LDCSVCLSKFESVEILRLLPKCRHAF 146
Query: 163 HAECVDAWLVNQSTCPVCR 181
H C+D WL +TCP+CR
Sbjct: 147 HIGCIDQWLEQHATCPLCR 165
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 90 GIRGRFDLAFPIGGSNWRHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDH 149
++GR+ F N +D ID+ P Y + GL+ + +CAVCL EF
Sbjct: 80 ALQGRYQTRF-----NLHDAEIDQSFIDALPLLHYKTMIGLRHDLS--DCAVCLREFTAE 132
Query: 150 ETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRAN 183
+ LRL+PKCSH FH EC+D WL+ STCP+CR N
Sbjct: 133 DELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDN 166
>AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein |
chr1:11675531-11676529 FORWARD LENGTH=332
Length = 332
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 80/158 (50%), Gaps = 11/158 (6%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
GLD +II+SFP + YS T +C++CL EF D +T+RLI C+H FH C+D
Sbjct: 130 GLDSKIIESFPEYPYSVK-----DHGTDQCSICLTEFMDDDTIRLISTCNHSFHTICIDL 184
Query: 170 WLVNQSTCPVCRANLLQGDAATTFVAVQIPDPEGHGSTT---PVPGSGDPSPNRVDNSSN 226
W TCPVCR L D + +++P+ + S P+P ++ S
Sbjct: 185 WFEGHKTCPVCRRELDVEDRTSLEKPLEVPEIDLVRSEIHDEPLPRDTVTIIVHEEHPST 244
Query: 227 NQSPKVGSDLVNQNRPVRSRSTGFRSWFPRSHSTGHSL 264
+D + ++ R +++ R W RSHSTGHS+
Sbjct: 245 TIGSLEHTDEI-ESYERRMKASNLRFW--RSHSTGHSI 279
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Query: 96 DLAFPIGGSNWRHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLI 155
DL+F + S RGLD +I S PTFV G+K A ECAVCL+ + + R++
Sbjct: 62 DLSFSVV-SQPPKRGLDSLVIASLPTFVV----GIKNDVAGTECAVCLSLLEEKDNARML 116
Query: 156 PKCSHVFHAECVDAWLVNQSTCPVCR 181
P C HVFH CVD WL QSTCPVCR
Sbjct: 117 PNCKHVFHVSCVDTWLTTQSTCPVCR 142
>AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein |
chr3:17725410-17727954 REVERSE LENGTH=349
Length = 349
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
GLD ID+ P F+Y V + + + +CAVCLNEF D + LRL+P CSH FH C+D
Sbjct: 180 GLDQTAIDALPVFLYGNVT-ISLEQP-FDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDT 237
Query: 170 WLVNQSTCPVCRANL 184
WL++ STCP+CR +L
Sbjct: 238 WLLSNSTCPLCRRSL 252
>AT5G43420.1 | Symbols: | RING/U-box superfamily protein |
chr5:17451790-17452917 FORWARD LENGTH=375
Length = 375
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 20/114 (17%)
Query: 91 IRGRFDLA---------FPIGGSNWRHRGLDPEIIDSFPTF-----------VYSAVKGL 130
I GRF L+ + R RGLD +I + P F V++
Sbjct: 70 ILGRFSLSRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEE 129
Query: 131 KIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANL 184
+ + + EC+VCL+EF+D E LR+IP CSH+FH +C+D WL N + CP+CR +
Sbjct: 130 EEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV 183
>AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 |
chr3:5692880-5693794 FORWARD LENGTH=304
Length = 304
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 109 RGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVD 168
RGLDP +I S P F +S + + +ECAVCL+EF + ET R++P C H FH +C+D
Sbjct: 93 RGLDPNVIKSLPVFTFSD----ETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCID 148
Query: 169 AWLVNQSTCPVCRA 182
W + STCP+CR+
Sbjct: 149 MWFHSHSTCPLCRS 162
>AT2G42360.1 | Symbols: | RING/U-box superfamily protein |
chr2:17640907-17641617 FORWARD LENGTH=236
Length = 236
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 109 RGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVD 168
RGL+P +I S PTF A G + + ECAVCL+ ++ + R +P C H+FH +CVD
Sbjct: 80 RGLNPTVIASLPTFTVGATDG--VAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVD 137
Query: 169 AWLVNQSTCPVCRANL 184
WL STCPVCR +
Sbjct: 138 TWLTTCSTCPVCRTEV 153
>AT4G33565.1 | Symbols: | RING/U-box superfamily protein |
chr4:16136821-16137924 FORWARD LENGTH=367
Length = 367
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 10/104 (9%)
Query: 107 RHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAEC 166
R GL+P +I S YS G+ G +C+VCL+EF + ETLRL+PKC H FH C
Sbjct: 188 RTIGLNPTVISSIKVCQYSKKDGVVEGT---DCSVCLSEFEEEETLRLLPKCKHAFHLYC 244
Query: 167 VDAWLVNQSTCPVCRANLLQGDAAT-------TFVAVQIPDPEG 203
+D WL + + CP+CRA +++ + ++V IP+ G
Sbjct: 245 IDTWLRSHTNCPLCRAPIVEANTMIDDHSEGLEEISVMIPEENG 288
>AT2G35420.1 | Symbols: | RING/U-box superfamily protein |
chr2:14899715-14900479 REVERSE LENGTH=254
Length = 254
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
GLDP II SFP F YS+ G ECA+CL+EF D +T+RLI C H FH+ C+D
Sbjct: 77 GLDPFIIRSFPVFHYSSATKKNHGT---ECAICLSEFSDEDTVRLITVCRHPFHSNCIDL 133
Query: 170 WLVNQSTCPVCRANL 184
W TCPVCR L
Sbjct: 134 WFELHKTCPVCRCEL 148
>AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily
protein | chr5:3267819-3268724 FORWARD LENGTH=301
Length = 301
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 16/120 (13%)
Query: 127 VKGLKIGRATL---ECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRAN 183
V G K G + EC+VCLNEF + E+LRL+PKCSH FH C+D WL++ CP+CRA
Sbjct: 120 VVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAP 179
Query: 184 LLQGDAATTFVAVQIPDPEGHGSTTPVPGSGDPSPNRVDNSSNNQS-----PKVGSDLVN 238
+L + + P E + P S + R D+S + ++ P+ SDL N
Sbjct: 180 VL--------LITEPPHQETETNHQPDSESSNDLRGRQDSSRSRRNHNIFLPRAQSDLAN 231
>AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 |
chr3:22254790-22255794 REVERSE LENGTH=334
Length = 334
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%)
Query: 115 IIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQ 174
++DS P F +S+V + +CAVCL++F + LRL+P C H FHA+C+D WLV+
Sbjct: 93 VLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSN 152
Query: 175 STCPVCRANLLQGDA 189
TCP+CR+ L ++
Sbjct: 153 QTCPLCRSPLFASES 167
>AT5G40250.1 | Symbols: | RING/U-box superfamily protein |
chr5:16086056-16087186 FORWARD LENGTH=376
Length = 376
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 78 FLSIYTRQCTERGIRGRFDLAFPIGGSNWRHRGLDPEIIDSFPTFVYSAV-------KGL 130
F I T +R ++ F L GLD ID+ P F Y + G
Sbjct: 84 FPEISTSDALQRQLQQLFHL---------NDSGLDQAFIDALPVFHYKEIVGSAGGGGGN 134
Query: 131 KIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLL 185
+ +CAVCL EF + + LRL+P CSH FH C+D WL + STCP+CR L
Sbjct: 135 GAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLF 189
>AT3G03550.1 | Symbols: | RING/U-box superfamily protein |
chr3:850391-851461 REVERSE LENGTH=356
Length = 356
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 111 LDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAW 170
LD +I S + Y + G + +C+VCL+EF+++E+LRL+PKC+H FH C+D W
Sbjct: 134 LDESLIKSITVYKYRKMDGFV---ESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTW 190
Query: 171 LVNQSTCPVCRANLLQGDAA 190
L + S CP+CRA ++ A
Sbjct: 191 LKSHSNCPLCRAFIVTSSAV 210
>AT1G72220.1 | Symbols: | RING/U-box superfamily protein |
chr1:27184388-27185629 REVERSE LENGTH=413
Length = 413
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 65/129 (50%), Gaps = 17/129 (13%)
Query: 88 ERGIRGRFDLAFPIGGSNW--RHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNE 145
E + R + PI W R GL II+S Y GL I R +C VCLNE
Sbjct: 131 EEEFQDREQVDHPI----WLIRTTGLQQSIINSITICNYKRGDGL-IERT--DCPVCLNE 183
Query: 146 FRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQGDAATTFVAVQIPDPEGHG 205
F + E+LRL+PKC+H FH C+D WL + + CP+CRA + ++V P G
Sbjct: 184 FEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGI-------AMISVTTPRYSGPV 236
Query: 206 STTPVPGSG 214
TP GSG
Sbjct: 237 EVTP-GGSG 244
>AT2G47560.1 | Symbols: | RING/U-box superfamily protein |
chr2:19511934-19512617 REVERSE LENGTH=227
Length = 227
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 107 RHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAEC 166
R + LD ++D P FVYS+ K EC+VCL+EF + + RL+PKC H FH +C
Sbjct: 77 RDQALDQAVLDKIPIFVYSS-KNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDC 135
Query: 167 VDAWLVNQSTCPVCRA 182
+D W ++STCP+CRA
Sbjct: 136 IDTWFRSRSTCPLCRA 151
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 108 HRGLDPEIIDSFPTFVYS---AVKGLK-IGRATLECAVCLNEFRDHETLRLIPKCSHVFH 163
+RGLD I + P F + V G + + + EC+VCLNEF++ E LR+IP C HVFH
Sbjct: 99 NRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFH 158
Query: 164 AECVDAWLVNQSTCPVCRANLLQGDAATTFVAVQIP 199
+C+D WL + CP+CR + + +A+ T + P
Sbjct: 159 IDCIDIWLQGNANCPLCRTS-VSCEASFTLDLISAP 193
>AT5G17600.1 | Symbols: | RING/U-box superfamily protein |
chr5:5800029-5801117 REVERSE LENGTH=362
Length = 362
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
GL+ +I S + Y + G G +C+VCL+EF ++E+LRL+PKC+H FH C+D
Sbjct: 116 GLNESMIKSITVYKYKSGDGFVDGS---DCSVCLSEFEENESLRLLPKCNHAFHLPCIDT 172
Query: 170 WLVNQSTCPVCRA 182
WL + S CP+CRA
Sbjct: 173 WLKSHSNCPLCRA 185
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query: 109 RGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVD 168
RGLD + + S P + Y+ K K + +C +CL++F + ET+++IP C HVFH +CVD
Sbjct: 114 RGLDSQAVRSLPVYRYT--KAAK--QRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVD 169
Query: 169 AWLVNQSTCPVCRANLLQGD 188
WL + TCP+CR+N L D
Sbjct: 170 TWLSSYVTCPLCRSNQLFSD 189
>AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVERSE
LENGTH=257
Length = 257
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 51/73 (69%), Gaps = 5/73 (6%)
Query: 111 LDPEIIDSFPTFVYSAVKGLKIGRATLE-CAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
LDP +++ P FVYS +K + LE C+VCL+EF + + R++PKC HVFH +C+D
Sbjct: 88 LDPTVLEKIPIFVYS----VKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDT 143
Query: 170 WLVNQSTCPVCRA 182
W ++S+CP+CRA
Sbjct: 144 WFRSRSSCPLCRA 156
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 110 GLDPEIIDSFPTFVYSAVKGL-KIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVD 168
GLD I+S+P V K L K+ AT CA+CL+E+ ETLR IP+C H FHA+C+D
Sbjct: 302 GLDGPTIESYPKIVLGESKRLPKVDDAT--CAICLSEYEPKETLRTIPQCQHCFHADCID 359
Query: 169 AWLVNQSTCPVCR 181
WL TCPVCR
Sbjct: 360 EWLKLNGTCPVCR 372
>AT2G35910.1 | Symbols: | RING/U-box superfamily protein |
chr2:15073225-15073878 REVERSE LENGTH=217
Length = 217
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
GLD + I S+P +YS KG CA+CL +++ LR +P C+H+FH +C+D
Sbjct: 121 GLDEDTIQSYPKILYSEAKGPTTASC---CAICLGDYKGKHLLRQLPDCNHLFHLKCIDT 177
Query: 170 WLVNQSTCPVCRANLLQGDAATTFVAV 196
WL TCPVCR + L +T V
Sbjct: 178 WLRLNPTCPVCRTSPLPTPLSTPLAEV 204
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 92 RGRFDLAFPIGGSNWRHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHET 151
R R F G + GL + S P V+ K G LEC++CL+E +
Sbjct: 84 RQRRRFIFVPGQDALSNTGLTSFELSSLP-IVFFRQDSCKDG---LECSICLSELVKGDK 139
Query: 152 LRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQGDAATTFVAVQIPDPEGHGSTT 208
RL+PKC+H FH EC+D W + STCP+CR +L + A++ Q+PD + TT
Sbjct: 140 ARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQASSKRVEQVPDNAENAGTT 196
>AT3G18930.2 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 104 SNWRHRGLDPEIIDSFPTFVYSAVKGL---KIGRATL----ECAVCLNEFRDHETLRLIP 156
S++ GLD +I + P F+YSA +G+ + +CAVCL EF + + +R +P
Sbjct: 114 SSYSPYGLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLP 173
Query: 157 KCSHVFHAECVDAWLVNQSTCPVCRANLLQGDAATTFVAVQIP 199
C H FH EC+D WL + CP+CR +L T ++ +P
Sbjct: 174 LCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVP 216
>AT3G18930.1 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 104 SNWRHRGLDPEIIDSFPTFVYSAVKGL---KIGRATL----ECAVCLNEFRDHETLRLIP 156
S++ GLD +I + P F+YSA +G+ + +CAVCL EF + + +R +P
Sbjct: 114 SSYSPYGLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLP 173
Query: 157 KCSHVFHAECVDAWLVNQSTCPVCRANLLQGDAATTFVAVQIP 199
C H FH EC+D WL + CP+CR +L T ++ +P
Sbjct: 174 LCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVP 216
>AT2G25410.1 | Symbols: | RING/U-box superfamily protein |
chr2:10814470-10815917 FORWARD LENGTH=377
Length = 377
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
GLD I+S+ + L G + C +CL+E+ ET+R +P+C H FH EC+DA
Sbjct: 298 GLDESTIESYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDA 357
Query: 170 WLVNQSTCPVCRAN 183
WL S+CPVCR+N
Sbjct: 358 WLKLHSSCPVCRSN 371
>AT5G01880.1 | Symbols: | RING/U-box superfamily protein |
chr5:339017-339496 FORWARD LENGTH=159
Length = 159
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
GL + FP Y + + +KI A ECA+CL EF D E +R++P C+H FH C+D
Sbjct: 79 GLKKRELKKFPVAEYGSGE-VKI--AATECAICLGEFADGERVRVLPPCNHSFHMSCIDT 135
Query: 170 WLVNQSTCPVCRANLLQ 186
WLV+ S+CP CR +L++
Sbjct: 136 WLVSHSSCPNCRHSLIE 152
>AT3G10910.1 | Symbols: | RING/U-box superfamily protein |
chr3:3413068-3413613 REVERSE LENGTH=181
Length = 181
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
GL + + P +Y + G+ +AT EC +CL +F D E +R++PKC+H FH C+D
Sbjct: 88 GLKKQALKQIPVGLYGS--GIIDMKAT-ECLICLGDFEDGEKVRVLPKCNHGFHVRCIDT 144
Query: 170 WLVNQSTCPVCRANLL 185
WL+++S+CP CR +LL
Sbjct: 145 WLLSRSSCPTCRQSLL 160
>AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein |
chr4:9948853-9949785 REVERSE LENGTH=310
Length = 310
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 92 RGRFDLAFPIGGSNWRHRGLDPEIIDSFPTF-VYSAVKGLKIGRATLECAVCLNEFRDHE 150
RG D F + S GLD +I F + G KI +C++CL EF + E
Sbjct: 112 RGDQDDPFALESST---AGLDDTLIKKIGFFKLKKHQNGFKINGT--DCSICLGEFNEDE 166
Query: 151 TLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLL 185
+LRL+PKC+H FH C+D WL + S CP+CRA ++
Sbjct: 167 SLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKII 201
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 102 GGSNWRHRGLDPEIIDSFPTFVYSAVKGLKIGRA----TLECAVCLNEFRDHETLRLIPK 157
G S ++GL + + S P ++A + A + ECA+CL +F D E +R++P
Sbjct: 61 GDSPSPNKGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPL 120
Query: 158 CSHVFHAECVDAWLVNQSTCPVCR 181
C H FH EC+D WLV++S+CP CR
Sbjct: 121 CGHSFHVECIDKWLVSRSSCPSCR 144
>AT5G05280.1 | Symbols: | RING/U-box superfamily protein |
chr5:1565509-1566039 REVERSE LENGTH=176
Length = 176
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 100 PIGGSNWRHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCS 159
P+ + +G+ + P YS +K EC +CL +F + ET+R++PKC+
Sbjct: 78 PVDTNANVAKGIKKRALKVIPVDSYSPELKMK----ATECLICLGDFVEGETVRVLPKCN 133
Query: 160 HVFHAECVDAWLVNQSTCPVCRANLLQ 186
H FH +C+D WL++ S+CP CR +LL+
Sbjct: 134 HGFHVKCIDTWLLSHSSCPTCRQSLLE 160
>AT1G53820.1 | Symbols: | RING/U-box superfamily protein |
chr1:20091491-20092423 FORWARD LENGTH=310
Length = 310
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
GLD +I+ S V+ K G LECAVCL++ D + R++P+C+H FH +C+D
Sbjct: 95 GLDSKILQSIHVVVFKCTD-FKDG---LECAVCLSDLVDGDKARVLPRCNHGFHVDCIDM 150
Query: 170 WLVNQSTCPVCR 181
W + STCP+CR
Sbjct: 151 WFQSHSTCPLCR 162
>AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr3:4777731-4778345 REVERSE LENGTH=204
Length = 204
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
G+ P ++ S P ++ K + LEC VCL+E D + R++P C H FH EC+D+
Sbjct: 63 GIKPYVLRSIPIVDFNT----KDFKYVLECVVCLSELADGDKARVLPSCDHWFHVECIDS 118
Query: 170 WLVNQSTCPVCR 181
WL + STCP+CR
Sbjct: 119 WLQSNSTCPICR 130
>AT2G46160.1 | Symbols: | RING/U-box superfamily protein |
chr2:18963109-18963753 FORWARD LENGTH=214
Length = 214
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 110 GLDPEIIDSFPTFVYS-----AVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHA 164
GLD +I+S+P F +S A G C++CL E+++ E LR++P+C H FH
Sbjct: 104 GLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMMPECKHYFHL 163
Query: 165 ECVDAWLVNQSTCPVCR 181
C+DAWL +CPVCR
Sbjct: 164 CCLDAWLKLNGSCPVCR 180
>AT3G61550.1 | Symbols: | RING/U-box superfamily protein |
chr3:22776444-22777082 FORWARD LENGTH=212
Length = 212
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 10/81 (12%)
Query: 110 GLDPEIIDSFPTF-----VYSAVKGLKI----GRATLECAVCLNEFRDHETLRLIPKCSH 160
GLD +I+S+P F + + V G GR T C++CL E+ + E LR++P+C H
Sbjct: 99 GLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRET-TCSICLCEYMEEEMLRMMPECKH 157
Query: 161 VFHAECVDAWLVNQSTCPVCR 181
FH C+DAWL +CPVCR
Sbjct: 158 YFHVYCLDAWLKLNGSCPVCR 178
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
GL +I + P +Y +K + C+VCL +++ E L+ +P C H FH EC+D
Sbjct: 86 GLSKDIREMLPVVIYKESFIVKDSQ----CSVCLGDYQAEEKLQQMPSCGHTFHMECIDL 141
Query: 170 WLVNQSTCPVCRANLL 185
WL + +TCP+CR +L+
Sbjct: 142 WLTSHTTCPLCRLSLI 157
>AT1G49230.1 | Symbols: | RING/U-box superfamily protein |
chr1:18209320-18209979 FORWARD LENGTH=219
Length = 219
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 102 GGSNWRHR----GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPK 157
GG N+ R G+ + + SF T YS L + ECA+CL+EF E ++L+P
Sbjct: 92 GGDNYPVRLTNTGVKRKALKSFQTVSYST--ELNLPGLDTECAICLSEFVAEERVKLLPT 149
Query: 158 CSHVFHAECVDAWLVNQSTCPVCRANLLQ 186
C H FH C+D WL + S+CP CR L+Q
Sbjct: 150 CHHGFHVRCIDKWLSSHSSCPTCRHCLIQ 178
>AT5G47610.1 | Symbols: | RING/U-box superfamily protein |
chr5:19301399-19301899 REVERSE LENGTH=166
Length = 166
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
Query: 112 DPEIIDS----FPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECV 167
DPE S PT VYS+ L++ A ECA+CL+EF E+++++ KC H FH +C+
Sbjct: 78 DPEAAASSTPTTPTLVYSS--DLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCI 135
Query: 168 DAWLVNQSTCPVCRANLLQGDAAT 191
WL +S+CP CR ++ + T
Sbjct: 136 HKWLSTRSSCPTCRTSIFSQHSET 159
>AT1G49200.1 | Symbols: | RING/U-box superfamily protein |
chr1:18198298-18198978 FORWARD LENGTH=226
Length = 226
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 97 LAFPIGGSNWRHRGLDPEIIDSFPTFVYSAVKGLK-IGRATLECAVCLNEFRDHETLRLI 155
L+ P G SN +G++ + + FP YS L +G EC +CL++F E +R++
Sbjct: 99 LSTPCGSSN---KGINKKALRMFPVVSYSPEMNLPGLGE---ECVICLSDFVSGEQIRML 152
Query: 156 PKCSHVFHAECVDAWLVNQSTCPVCRANLLQ 186
PKC H FH C+D WL TCP CR L++
Sbjct: 153 PKCHHGFHVRCIDKWLQQHLTCPKCRHCLVE 183
>AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein |
chr1:28668915-28669472 FORWARD LENGTH=185
Length = 185
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 100 PIGGSNWRHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCS 159
P+ +N +GL +++ S P YS +ECA+CL EF + LR++P+C
Sbjct: 70 PVAAAN---KGLKKKVLRSLPKLTYS--PDSPPAEKLVECAICLTEFAAGDELRVLPQCG 124
Query: 160 HVFHAECVDAWLVNQSTCPVCRANLL 185
H FH C+D WL + S+CP CR L+
Sbjct: 125 HGFHVSCIDTWLGSHSSCPSCRQILV 150
>AT2G46493.1 | Symbols: | RING/U-box superfamily protein |
chr2:19080254-19081242 REVERSE LENGTH=184
Length = 184
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 109 RGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVD 168
RGLD I++F + L G + C +CL+E+ ET+R IP+C H FH EC+D
Sbjct: 109 RGLDQSTIETFKKMELGESRRLS-GTNGIVCPICLSEYASKETVRFIPECDHCFHVECID 167
Query: 169 AWLVNQSTCPVCR 181
WL +CP+CR
Sbjct: 168 VWLKIHGSCPLCR 180
>AT2G46495.1 | Symbols: | RING/U-box superfamily protein |
chr2:19084134-19085704 REVERSE LENGTH=372
Length = 372
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
GLD II+S+ + L + C +CL+E+ ET+R IP+C H FH+EC+D
Sbjct: 291 GLDESIIESYKKTELGESRRLPGNNDDIVCPICLSEYASKETVRCIPECDHCFHSECIDV 350
Query: 170 WLVNQSTCPVCR 181
WL +CP+CR
Sbjct: 351 WLKIHGSCPLCR 362
>AT1G49210.1 | Symbols: | RING/U-box superfamily protein |
chr1:18201994-18202671 FORWARD LENGTH=225
Length = 225
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 82 YTRQCTERGIRGRFDLAFPIGGSNWR----HRGLDPEIIDSFPTFVYSAVKGLK-IGRAT 136
Y +C R RF ++ PI + ++G+ + + FP YS L IG
Sbjct: 77 YIIRCAFRR-SSRFMISEPISSLSTPRSSSNKGIKKKALRMFPVVSYSREMNLPGIGE-- 133
Query: 137 LECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQ 186
EC +CL++F E LRL+PKC+H FH C+D WL + TCP CR L++
Sbjct: 134 -ECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVE 182
>AT5G06490.1 | Symbols: | RING/U-box superfamily protein |
chr5:1977996-1978589 REVERSE LENGTH=197
Length = 197
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 110 GLDPEIIDSFPTFVYSAVKG----LKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAE 165
GL E+I FP Y + K T C++CL +++ + +R++P C+H+FH
Sbjct: 96 GLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDN 155
Query: 166 CVDAWLVNQSTCPVCRANLLQGDAATTFVAV 196
CVD WL TCPVCR + L A T V
Sbjct: 156 CVDPWLRLHPTCPVCRTSPLPSPAMTPVADV 186
>AT4G10160.1 | Symbols: | RING/U-box superfamily protein |
chr4:6336023-6337301 FORWARD LENGTH=225
Length = 225
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
GL +I + P +Y + + +C+VCL +++ E L+ +P C H FH EC+D
Sbjct: 72 GLSKDIREMLPIVIYK--ESFTVNDT--QCSVCLGDYQAEEKLQQMPSCGHTFHMECIDL 127
Query: 170 WLVNQSTCPVCRANLL 185
WL + +TCP+CR +L+
Sbjct: 128 WLTSHTTCPLCRLSLI 143
>AT1G49220.1 | Symbols: | RING/U-box superfamily protein |
chr1:18205946-18206701 FORWARD LENGTH=251
Length = 251
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 13/112 (11%)
Query: 82 YTRQCTERGIRGRFDLAFPI-------GGSNWRHRGLDPEIIDSFPTFVYSAVKGLKIGR 134
Y +C R RF ++ P+ G SN +G+ + + FP YS + +
Sbjct: 77 YIIRCALRR-STRFMISEPVPSLSSTRGSSN---KGIKKKALRMFPVVSYS--PEMNLPG 130
Query: 135 ATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQ 186
EC +CL++F E LRL+PKC+H FH C+D WL TCP CR L++
Sbjct: 131 LDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVE 182
>AT4G30370.1 | Symbols: | RING/U-box superfamily protein |
chr4:14858743-14859273 REVERSE LENGTH=176
Length = 176
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
GL P + P F Y G +C VC++ FR + R +P+C HVFH +CVD
Sbjct: 89 GLSPRCVKRLPQFKYCEPSSEYGGD---DCVVCIDGFRQGQWCRKLPRCGHVFHRKCVDL 145
Query: 170 WLVNQSTCPVCR 181
WL+ STCP+CR
Sbjct: 146 WLIKVSTCPICR 157
>AT1G35625.1 | Symbols: | RING/U-box superfamily protein |
chr1:13158466-13159260 REVERSE LENGTH=201
Length = 201
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 108 HRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECV 167
H + +++ S PT VY+ V L+ G ++ CA+C++++R E LR++P C H +HA C+
Sbjct: 87 HSRMPKDLLQSMPTEVYTGV--LEEGSTSVTCAICIDDYRVGEILRILP-CKHKYHAVCI 143
Query: 168 DAWLVN-QSTCPVCRAN 183
D+WL +S CPVC+ N
Sbjct: 144 DSWLGRCRSFCPVCKQN 160
>AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B |
chr4:16852233-16852835 REVERSE LENGTH=200
Length = 200
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 133 GRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLL 185
G ++ ECA+C+ EF + E +R++P CSH FH C+D WL ++S+CP CR L+
Sbjct: 107 GDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRILV 159
>AT4G17245.1 | Symbols: | RING/U-box superfamily protein |
chr4:9669383-9669883 FORWARD LENGTH=166
Length = 166
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 117 DSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWL-VNQS 175
D+ PT VYS GL + EC +CL+EF+D +TLR++ +C H FH C+ WL + S
Sbjct: 82 DAPPTLVYS--PGLNLAGNEAECIICLSEFQDGDTLRVLERCKHGFHVYCIQKWLSSSHS 139
Query: 176 TCPVCRANLL 185
+CP CR N+
Sbjct: 140 SCPTCRTNIF 149
>AT1G20823.1 | Symbols: | RING/U-box superfamily protein |
chr1:7238880-7239473 FORWARD LENGTH=197
Length = 197
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 100 PIGGSNWRHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCS 159
P+ +N +GL +++ S P +S A ECA+CL EF + LR++P+C
Sbjct: 77 PVAAAN---KGLKKKVLQSLPKLTFSPESPESEKFA--ECAICLAEFSAGDELRVLPQCG 131
Query: 160 HVFHAECVDAWLVNQSTCPVCRANLL 185
H FH C+D WL + S+CP CR L+
Sbjct: 132 HGFHVACIDTWLGSHSSCPSCRQILV 157
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 99 FPIGGSNWRHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKC 158
F GGS +GL +++D P + L C+VCL +F+ ET+R +P C
Sbjct: 155 FDTGGS----KGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHC 210
Query: 159 SHVFHAECVDAWLVNQSTCPVCRANL 184
H+FH C+D WL +CP+CR +L
Sbjct: 211 HHMFHLPCIDNWLFRHGSCPMCRRDL 236
>AT1G28040.1 | Symbols: | RING/U-box superfamily protein |
chr1:9773580-9774910 REVERSE LENGTH=299
Length = 299
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
GLD I+S+ + L G + C +CL+E+ ET+R +P+C H FH +C+D
Sbjct: 225 GLDQSTIESYKKVELGESRRLP-GTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDE 283
Query: 170 WLVNQSTCPVCR 181
WL S+CPVCR
Sbjct: 284 WLKIHSSCPVCR 295
>AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705312 FORWARD LENGTH=241
Length = 241
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 99 FPIGGSNWRHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKC 158
F GGS +GL ++++ P + T C+VCL +F+ ET+R +P C
Sbjct: 160 FDTGGS----KGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHC 215
Query: 159 SHVFHAECVDAWLVNQSTCPVCRANL 184
H+FH C+D WL+ +CP+CR ++
Sbjct: 216 HHMFHLPCIDNWLLRHGSCPMCRRDI 241
>AT2G18670.1 | Symbols: | RING/U-box superfamily protein |
chr2:8093469-8094452 FORWARD LENGTH=181
Length = 181
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
GL + P F +S R +C VC + FR + R +P C HVFH +CVD
Sbjct: 83 GLSSRFVKKLPQFKFSEPSTYT--RYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDT 140
Query: 170 WLVNQSTCPVCRANL 184
WL+ STCP+CRA +
Sbjct: 141 WLLKASTCPICRARV 155
>AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 |
chr5:23676906-23677832 REVERSE LENGTH=308
Length = 308
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 93 GRFD--LAFPIGGSNWRHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHE 150
G FD ++ P + +GLD +I S P FVY + + EC +CL + +
Sbjct: 92 GGFDDGVSSPAATATRDDKGLDSSVISSIPLFVYEENEEEE--DEEEECVICLGLWEAGD 149
Query: 151 TLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQG--DAATTFVAVQIPDPEGH 204
R + C H FH EC+D WL + STCP+CR+ +L D +AV + E
Sbjct: 150 FGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPVLAAVSDEENLKLAVNAVEEEAE 205
>AT2G46494.1 | Symbols: | RING/U-box superfamily protein |
chr2:19082344-19083811 REVERSE LENGTH=362
Length = 362
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 109 RGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVD 168
RGLD I+ + T + G + C +CL+E+ ET+R IP+C H FHA+C+D
Sbjct: 287 RGLDQSTIEKYKTMELGESRR-PPGTNGIVCPICLSEYVSKETVRFIPECDHCFHAKCID 345
Query: 169 AWLVNQSTCPVCR 181
WL +CP+CR
Sbjct: 346 VWLKIHGSCPLCR 358
>AT1G74410.1 | Symbols: | RING/U-box superfamily protein |
chr1:27965723-27967681 FORWARD LENGTH=223
Length = 223
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 109 RGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVD 168
RGL + + P ++ S+ + R C +CL + + E R +PKC H FH CVD
Sbjct: 149 RGLSGDSLRKLPCYIMSSEM---VRRQVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVD 205
Query: 169 AWLVNQSTCPVCR 181
WL+ +CP+CR
Sbjct: 206 KWLIRHGSCPICR 218
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 104 SNWRHRG-----LDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKC 158
+ WR R LD +++ + P F ++ K G CA+CL ++R E+LRL+P C
Sbjct: 195 TQWRGRHTRTIRLDAKLVHTLPCFTFTDSAHHKAGET---CAICLEDYRFGESLRLLP-C 250
Query: 159 SHVFHAECVDAWLVNQST-CPVCRANL 184
H FH C+D+WL T CPVC+ ++
Sbjct: 251 QHAFHLNCIDSWLTKWGTSCPVCKHDI 277
>AT5G07040.1 | Symbols: | RING/U-box superfamily protein |
chr5:2190344-2190823 FORWARD LENGTH=159
Length = 159
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 12/115 (10%)
Query: 75 MLGFLSIYTRQCTERGIRGR--------FDLAFPIGGSNWRHRGLDPEIIDSFPTFVYSA 126
++ F+ + + C GR DL P GLD +I+S+P V
Sbjct: 26 LISFIMLASYICIRSKSTGRDEATSDVVLDLPSPAAEVKL---GLDRPVIESYPRIVLGD 82
Query: 127 VKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCR 181
+ L C++CL ++ E +R IP+C+H FH +CVD WL +TCP+CR
Sbjct: 83 SRRLPRPNNG-PCSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCR 136
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 14/100 (14%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
GL E+ + P V+ + + + +C+VCL +++ ++ L+ IP C H FH +C+D
Sbjct: 75 GLSKELREMLPIVVFK--ESFTVMDS--QCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDL 130
Query: 170 WLVNQSTCPVCRANLL-------QGDAATTFVAVQIPDPE 202
WL + +TCP+CR L+ Q D + V+ PD E
Sbjct: 131 WLTSHTTCPLCRLALIPSRSRQSQDDPVPSLVS---PDEE 167
>AT5G66160.2 | Symbols: RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446722 FORWARD LENGTH=290
Length = 290
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 104 SNWRHRG-----LDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKC 158
+ WR R LD +++ + P F ++ K G CA+CL ++R E+LRL+P C
Sbjct: 195 TQWRGRHTRTIRLDAKLVHTLPCFTFTDSAHHKAGET---CAICLEDYRFGESLRLLP-C 250
Query: 159 SHVFHAECVDAWLVNQST-CPVCRANL 184
H FH C+D+WL T CPVC+ ++
Sbjct: 251 QHAFHLNCIDSWLTKWGTSCPVCKHDI 277
>AT5G42200.1 | Symbols: | RING/U-box superfamily protein |
chr5:16860523-16861014 FORWARD LENGTH=163
Length = 163
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 132 IGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANL 184
I R+T ECAVCL + ++ RL+P C+H FH C D WL N + CPVCRA L
Sbjct: 98 IARST-ECAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLSNHTVCPVCRAEL 149
>AT1G53010.1 | Symbols: | RING/U-box superfamily protein |
chr1:19747847-19748383 FORWARD LENGTH=178
Length = 178
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 138 ECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANL 184
ECA+CL+ + +E R+ P C H++HA C+DAWL N TCP CR +L
Sbjct: 129 ECAICLSGYVVNEECRVFPVCRHIYHALCIDAWLKNHLTCPTCRKDL 175
>AT3G18773.1 | Symbols: | RING/U-box superfamily protein |
chr3:6466304-6466966 FORWARD LENGTH=220
Length = 220
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 109 RGLDPEIIDSFPTFVYSAVKGLK-IGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECV 167
+G+ + + P YS L +G EC +CL++F E LR++PKC+H FH C+
Sbjct: 102 KGIKKKALKMLPVVNYSPEINLPGVGE---ECVICLSDFVAGEQLRVLPKCNHGFHLRCI 158
Query: 168 DAWLVNQSTCPVCRANLL 185
D WL TCP CR L+
Sbjct: 159 DKWLTQHMTCPKCRHCLV 176
>AT2G34000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14365177-14365632 FORWARD LENGTH=151
Length = 151
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 92 RGRFDLAFPIGGSNW-----RHRGLDPEIIDSFPTFVYSAVKG-LKIGRATLECAVCLNE 145
R RFD++ N R +GL +I +FPTF Y + +EC VCL
Sbjct: 38 RRRFDVSPETENENQGRREPRCQGLSASVIAAFPTFSYKPDNNDPESNNQEIECPVCLGL 97
Query: 146 FRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCR 181
+ ++++P C H+F EC+ WL + +TCPVCR
Sbjct: 98 IPKNVVIKVLPNCMHMFDEECIGKWLESHATCPVCR 133
>AT5G36001.1 | Symbols: | RING/U-box superfamily protein |
chr5:14142050-14143143 FORWARD LENGTH=322
Length = 322
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 139 CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCR--ANLLQGDAATTFVA 195
C +CL+E+ ET++ +P+C H FH EC+D WL ++CPVCR + L AATT V
Sbjct: 264 CPICLSEYTSEETVKCLPECEHCFHTECIDPWLKLHNSCPVCRNSPSSLPNKAATTNVV 322
>AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B |
chr4:6906066-6906539 FORWARD LENGTH=157
Length = 157
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 139 CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLV--NQSTCPVCRANLLQGDAATTF 193
C VCL++F + +R +PKC HVFH C+D W+V N+ TCP+CR L + +T F
Sbjct: 85 CTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWIVDCNKITCPICRNRFLPEEKSTPF 141
>AT3G19140.1 | Symbols: DNF | RING/U-box superfamily protein |
chr3:6614910-6615335 REVERSE LENGTH=141
Length = 141
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
G++P ++ S P ++A + +EC VCL++F D + R++P C+H FH + D
Sbjct: 54 GINPSVLLSIPVVSFNA----NAFKDNIECVVCLSKFIDEDKARVLPSCNHCFHFDFTDT 109
Query: 170 WLVNQSTCPVCRANL 184
WL + TCP CR N+
Sbjct: 110 WLHSDYTCPNCRKNV 124
>AT2G44578.1 | Symbols: | RING/U-box superfamily protein |
chr2:18400864-18401301 REVERSE LENGTH=145
Length = 145
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%)
Query: 139 CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQGDAATTFVAVQI 198
C +CL + + E +R I CSH FH +C+D WL+ +STCP+CRA + VA+ +
Sbjct: 70 CTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEIPPVPPGNPLVALFV 129
Query: 199 P 199
P
Sbjct: 130 P 130
>AT3G11110.1 | Symbols: | RING/U-box superfamily protein |
chr3:3479979-3480455 FORWARD LENGTH=158
Length = 158
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 107 RHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAEC 166
R GLDP I S P + + + +CL F + E ++++P CSH +H EC
Sbjct: 77 RSGGLDPAEIRSLPVVLCRRERAEEEEEKEC--CICLGGFEEGEKMKVLPPCSHCYHCEC 134
Query: 167 VDAWLVNQSTCPVCRANL 184
VD WL +S+CP+CR ++
Sbjct: 135 VDRWLKTESSCPLCRVSI 152
>AT5G41400.1 | Symbols: | RING/U-box superfamily protein |
chr5:16569584-16570114 REVERSE LENGTH=176
Length = 176
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 117 DSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLV--NQ 174
+ P +S + G + CAVCL+EF + + +R + C H+FH C+D W++ NQ
Sbjct: 83 EILPVIRFSELTRPGFGSGSDCCAVCLHEFENDDEIRRLTNCQHIFHRSCLDRWMMGYNQ 142
Query: 175 STCPVCRANLLQGDAATTF 193
TCP+CR + + F
Sbjct: 143 MTCPLCRTPFISDELQVAF 161
>AT5G66070.1 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=221
Length = 221
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 136 TLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANL 184
+ C+VCL +F+ ET+R +P C H+FH C+D WL ++CP+CR +L
Sbjct: 173 IVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 221
>AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:13163041-13164484 REVERSE
LENGTH=318
Length = 318
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 4/71 (5%)
Query: 114 EIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVN 173
+++ S PT VYS V L+ ++ CA+C++++ E LR++P C H +HA C+D+WL
Sbjct: 210 DLLQSMPTEVYSGV--LEESSTSVTCAICIDDYCVGEKLRILP-CKHKYHAVCIDSWLGR 266
Query: 174 -QSTCPVCRAN 183
+S CPVC+ N
Sbjct: 267 CRSFCPVCKQN 277
>AT5G66070.2 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=245
Length = 245
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 136 TLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANL 184
+ C+VCL +F+ ET+R +P C H+FH C+D WL ++CP+CR +L
Sbjct: 197 IVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 245
>AT3G20395.1 | Symbols: | RING/U-box superfamily protein |
chr3:7112020-7113792 REVERSE LENGTH=223
Length = 223
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 139 CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANL 184
C++CL ++ + E R + +C H FH C+D WL+ Q TCP+CR +L
Sbjct: 171 CSICLQDWEEGEVGRKLARCGHTFHMNCIDEWLLRQETCPICRDHL 216
>AT2G28920.1 | Symbols: | RING/U-box superfamily protein |
chr2:12418017-12418454 FORWARD LENGTH=145
Length = 145
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 33/44 (75%)
Query: 139 CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRA 182
C +CL +F+ ++ +R++ +C HVFH +C+D+W + TCP+CRA
Sbjct: 93 CVICLEDFKVNDVVRVLVRCKHVFHVDCIDSWCFYKLTCPICRA 136
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 138 ECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANL 184
EC +CL +++D E +R +P CSH FH++CVD WL S CP+C+ +L
Sbjct: 296 ECCICLAKYKDKEEVRKLP-CSHKFHSKCVDQWLRIISCCPLCKQDL 341
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 138 ECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANL 184
EC +CL +++D E +R +P CSH FH++CVD WL S CP+C+ +L
Sbjct: 296 ECCICLAKYKDKEEVRKLP-CSHKFHSKCVDQWLRIISCCPLCKQDL 341
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 126 AVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLL 185
A+ +KI TL+C+VCL++F +L+P C+H FH++C+ WL S+CPVCR L
Sbjct: 211 ALATVKI-EETLQCSVCLDDFEIGTEAKLMP-CTHKFHSDCLLPWLELHSSCPVCRYQLP 268
Query: 186 QGDAATTFV 194
+A T V
Sbjct: 269 ADEAKTDSV 277
>AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:8021854-8023516 REVERSE
LENGTH=422
Length = 422
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 101 IGGSNWRHRGLDPEIIDSFPTFVYSAVKGLKIGRAT-LECAVCLNEFRDHETLRLIPKCS 159
I S + G+ + + P+ ++ K I T CA+CL ++ + LR++P CS
Sbjct: 196 IRNSTSQFNGMCRRTVKAMPSVTFTCAK---IDNTTGFSCAICLEDYIVGDKLRVLP-CS 251
Query: 160 HVFHAECVDAWLVNQST-CPVCR------ANLLQGDAATTFVAVQIPDPEGHGSTTPVPG 212
H FH CVD+WL++ T CPVC+ A+ +T F++ I +P G
Sbjct: 252 HKFHVACVDSWLISWRTFCPVCKRDARTTADEPLATESTPFLSSSIATSSLVCIDSPPLG 311
Query: 213 SGDP-SPNRVDNSSNNQ----SPKVGS----DLVNQNRPVRSRSTGFRSWFPRSHSTGHS 263
S SP V +S +Q SP GS +L Q P++S S SHS G+S
Sbjct: 312 SSVSFSPAHVSSSFIHQFVRSSPMNGSRISENLRRQASPLQSSSQRSHLSMKSSHSLGYS 371
>AT3G60966.1 | Symbols: | RING/U-box superfamily protein |
chr3:22552718-22553137 FORWARD LENGTH=139
Length = 139
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 139 CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANL 184
CAVCL E + E +R + C H FHA+C+D WL S CP+CRA +
Sbjct: 62 CAVCLQEAEEGEKMRRLTICRHCFHADCIDTWLSEMSKCPLCRAQI 107
>AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A |
chr4:6907777-6908256 FORWARD LENGTH=159
Length = 159
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 139 CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLV--NQSTCPVCRANLLQGDAAT 191
C VCL++F + +R +PKC HVFH C+D W+V N+ CPVCR L + T
Sbjct: 86 CTVCLSDFESDDKVRQLPKCGHVFHHYCLDRWIVDYNKMKCPVCRHRFLPKEKYT 140
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 139 CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQGDAATT 192
C +CL + D E +R +P CSHVFH +CVD WL +TCP+C+ + + +A++
Sbjct: 355 CCICLTRYGDDEQVRELP-CSHVFHVDCVDKWLKINATCPLCKNEVGESSSASS 407
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 116 IDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQS 175
ID+ PT V + +CAVC++EF D ++ +P C HVFH +C+ WL +
Sbjct: 196 IDALPTV---KVTKDMLKSEMNQCAVCMDEFEDGSDVKQMP-CKHVFHQDCLLPWLELHN 251
Query: 176 TCPVCRANLLQGD 188
+CPVCR L D
Sbjct: 252 SCPVCRFELPTDD 264
>AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:27098250-27099881 FORWARD
LENGTH=448
Length = 448
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 110 GLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDA 169
G+ ++ + P+ ++S+ + CA+CL ++ + LRL+P C H FHA CVD+
Sbjct: 205 GMSRRLVKAMPSLIFSSFH--EDNTTAFTCAICLEDYTVGDKLRLLP-CCHKFHAACVDS 261
Query: 170 WLVNQST-CPVCR 181
WL + T CPVC+
Sbjct: 262 WLTSWRTFCPVCK 274
>AT2G37580.1 | Symbols: | RING/U-box superfamily protein |
chr2:15764745-15765452 FORWARD LENGTH=235
Length = 235
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 138 ECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANL 184
EC+VCL F D + LR + +C H FH C++ WL + CP+CR ++
Sbjct: 141 ECSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICRTDV 187
>AT4G24015.1 | Symbols: | RING/U-box superfamily protein |
chr4:12469887-12471197 REVERSE LENGTH=174
Length = 174
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 139 CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANL 184
C VCL EF E L +P C H+FH +C+ WL + +TCP+CR+++
Sbjct: 105 CCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCRSSV 150
>AT3G19910.1 | Symbols: | RING/U-box superfamily protein |
chr3:6926497-6929324 FORWARD LENGTH=340
Length = 340
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 109 RGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVD 168
RGL + I S P+ Y +G C +C ++ D E L L+P C H +H+EC++
Sbjct: 260 RGLSADTIASLPSKRYK--EGDNQNGTNESCVICRLDYEDDEDLILLP-CKHSYHSECIN 316
Query: 169 AWLVNQSTCPVCRANL 184
WL CPVC A +
Sbjct: 317 NWLKINKVCPVCSAEV 332
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 139 CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQ 186
C+VCL +F ET+ L P C H+FH EC+ WL + CPVCR +L+
Sbjct: 172 CSVCLEDFEPKETVMLTP-CKHMFHEECIVPWLKTKGQCPVCRFVILK 218
>AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:23425574-23427073 FORWARD
LENGTH=381
Length = 381
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 138 ECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQ 186
EC +CL+ + D LR +P C H FH CVD WL +TCP+C+ N+L+
Sbjct: 324 ECCICLSAYEDETELRELP-CGHHFHCGCVDKWLYINATCPLCKYNILK 371
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 138 ECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQ 186
EC +CL+ + D LR +P C H FH CVD WL +TCP+C+ N+L+
Sbjct: 352 ECCICLSAYEDGTELRELP-CGHHFHCSCVDKWLYINATCPLCKYNILK 399
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 109 RGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVD 168
RGL E+I++ PT Y RA C +C +++ E +P C HV+H+EC+
Sbjct: 167 RGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLP-CKHVYHSECIS 225
Query: 169 AWLVNQSTCPVCRANLL 185
WL CPVC + +
Sbjct: 226 KWLSINKVCPVCNSEVF 242
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 109 RGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVD 168
RGL E+I++ PT Y RA C +C +++ E +P C HV+H+EC+
Sbjct: 167 RGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLP-CKHVYHSECIS 225
Query: 169 AWLVNQSTCPVCRANLL 185
WL CPVC + +
Sbjct: 226 KWLSINKVCPVCNSEVF 242
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 139 CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQ 186
C+VCL +F ET+ L P C H+FH EC+ WL + CPVCR +L+
Sbjct: 144 CSVCLEDFEPKETVMLTP-CKHMFHEECIVPWLKTKGQCPVCRFVILK 190
>AT5G41450.1 | Symbols: | RING/U-box superfamily protein |
chr5:16588600-16589094 REVERSE LENGTH=164
Length = 164
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 128 KGLKIGRATLECAVCLNEFRD-HETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANL 184
K +K G + C +CL EF D HE +R I C HVFH C+D WL TCP CR +L
Sbjct: 99 KDIKEGSNKIFCPICLEEFEDGHEIIR-INMCRHVFHRFCIDPWLNQNLTCPNCRCSL 155
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 116 IDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQS 175
ID+ P +G EC +CL E++ ET++ +P C H FH C++ WL
Sbjct: 98 IDAMPIVEIDGCEG--------ECVICLEEWKSEETVKEMP-CKHRFHGGCIEKWLGFHG 148
Query: 176 TCPVCRANL-LQGD 188
+CPVCR + + GD
Sbjct: 149 SCPVCRYEMPVDGD 162
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 25/108 (23%)
Query: 109 RGLDPEIIDSFPTFVYSAVK----GLKIGRATLE--------------------CAVCLN 144
RG PE I++ PT + K G G +T E C +CL
Sbjct: 309 RGATPESINALPTHKFKLKKSRSNGDDNGSSTSEGGVVAAGTDNERAISGEDAVCCICLA 368
Query: 145 EFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQGDAATT 192
++ ++E LR +P CSH FH ECVD WL ++CP+C++ + + ++ T
Sbjct: 369 KYANNEELRELP-CSHFFHKECVDKWLKINASCPLCKSEVGEKNSDLT 415
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 138 ECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQ 186
EC +CL+ + D LR +P C H FH CVD WL +TCP+C+ N+L+
Sbjct: 281 ECCICLSAYEDGTELRELP-CGHHFHCSCVDKWLYINATCPLCKYNILK 328
>AT2G44581.1 | Symbols: | RING/U-box superfamily protein |
chr2:18397996-18398433 REVERSE LENGTH=145
Length = 145
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 139 CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANL 184
C +CL + E +R I CSH FH +C+D WL +S CP+CRA +
Sbjct: 70 CTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEI 115
>AT3G02340.1 | Symbols: | RING/U-box superfamily protein |
chr3:477032-478261 FORWARD LENGTH=409
Length = 409
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 115 IIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQ 174
+I P V AV+ L G CAVC +E E +R +P CSH +H EC+ WL +
Sbjct: 314 VIQDLPV-VELAVEELDKGNNV--CAVCKDEMLVEEKVRRLP-CSHFYHGECIIPWLGIR 369
Query: 175 STCPVCRANL 184
+TCPVCR L
Sbjct: 370 NTCPVCRYEL 379
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 138 ECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANL 184
EC +CL ++++ E +R +P CSH FH +CVD WL S CP+C+ +L
Sbjct: 288 ECCICLAKYKEKEEVRKLP-CSHRFHLKCVDQWLRIISCCPLCKQDL 333
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 138 ECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANL 184
EC +CL ++++ E +R +P CSH FH +CVD WL S CP+C+ +L
Sbjct: 288 ECCICLAKYKEKEEVRKLP-CSHRFHLKCVDQWLRIISCCPLCKQDL 333
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 138 ECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQ 186
EC +CL E+ D LR +P C+H FH C+D WL S CP+C+ N+L+
Sbjct: 337 ECCICLCEYEDGVELRELP-CNHHFHCTCIDKWLHINSRCPLCKFNILK 384
>AT1G63840.1 | Symbols: | RING/U-box superfamily protein |
chr1:23689991-23690491 REVERSE LENGTH=166
Length = 166
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 139 CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLV--NQSTCPVCRANLLQGDAATTF 193
CAVCL +F + + +R + C H+FH C+D W++ NQ TCP+CR + F
Sbjct: 89 CAVCLYDFENDDEIRRLTNCRHIFHRGCLDRWMMGYNQMTCPLCRTQFIPDHLQLEF 145
>AT3G13430.3 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 126 AVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLL 185
A+ +KI + L+C+VCL++F + +P C H FH++C+ WL S+CPVCR L
Sbjct: 212 ALAMVKIEDSLLQCSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCRYLLP 270
Query: 186 QGD 188
GD
Sbjct: 271 TGD 273
>AT3G13430.2 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 126 AVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLL 185
A+ +KI + L+C+VCL++F + +P C H FH++C+ WL S+CPVCR L
Sbjct: 212 ALAMVKIEDSLLQCSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCRYLLP 270
Query: 186 QGD 188
GD
Sbjct: 271 TGD 273
>AT3G13430.1 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 126 AVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLL 185
A+ +KI + L+C+VCL++F + +P C H FH++C+ WL S+CPVCR L
Sbjct: 212 ALAMVKIEDSLLQCSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCRYLLP 270
Query: 186 QGD 188
GD
Sbjct: 271 TGD 273
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 114 EIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWL-- 171
+++D P +Y+ + +C +CL E+ + +++R +P C H FH CVD WL
Sbjct: 469 DVVDLLPIKLYTKSQSEDPS----QCYICLVEYEEADSIRTLP-CHHEFHKTCVDKWLKE 523
Query: 172 VNQSTCPVCRANLLQGD 188
++ CP+CR ++ + D
Sbjct: 524 IHSRVCPLCRGDICRHD 540
>AT3G61180.1 | Symbols: | RING/U-box superfamily protein |
chr3:22645680-22647290 FORWARD LENGTH=379
Length = 379
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 138 ECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQ 186
EC++CL + D LR +P C H FH+ CVD WL +TCP+C+ N+L+
Sbjct: 322 ECSICLCAYEDGVELRELP-CRHHFHSLCVDKWLRINATCPLCKFNILK 369
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 90 GIRGRFDLAFPIGGSNWRHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDH 149
G R D F GG R L E+ ++ P V K G CA+CL+E+
Sbjct: 65 GSRSGLDDFFSDGGKQGRSPALKSEV-ENMPRVVIGEDKEKYGG----SCAICLDEWSKG 119
Query: 150 ETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANL 184
+ +P C H FH++CV+ WL +TCP+CR +
Sbjct: 120 DVAAEMP-CKHKFHSKCVEEWLGRHATCPMCRYEM 153
>AT1G04790.1 | Symbols: | RING/U-box superfamily protein |
chr1:1345469-1348143 FORWARD LENGTH=634
Length = 634
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 95 FDLAFPIGGSNWRHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRL 154
++L + +N RH G I++ P ++ C +CL + +T+R
Sbjct: 551 YELLLALDENNHRHGGASANRINNLPEST------VQTDNFQETCVICLETPKIGDTIRH 604
Query: 155 IPKCSHVFHAECVDAWLVNQSTCPVCRANL 184
+P C H FH +C+D WL +CPVC++++
Sbjct: 605 LP-CLHKFHKDCIDPWLGRSKSCPVCKSSV 633
>AT3G56580.3 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 108 HRGLDP---EIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHA 164
HRG P ID+ PT + K LK + C VC +EF + +P C H++H+
Sbjct: 155 HRGPPPAPKSSIDALPTIKITQ-KHLK--SSDSHCPVCKDEFELKSEAKQMP-CHHIYHS 210
Query: 165 ECVDAWLVNQSTCPVCRANL 184
+C+ WLV ++CPVCR L
Sbjct: 211 DCIVPWLVQHNSCPVCRKEL 230
>AT3G56580.1 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 108 HRGLDP---EIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHA 164
HRG P ID+ PT + K LK + C VC +EF + +P C H++H+
Sbjct: 155 HRGPPPAPKSSIDALPTIKITQ-KHLK--SSDSHCPVCKDEFELKSEAKQMP-CHHIYHS 210
Query: 165 ECVDAWLVNQSTCPVCRANL 184
+C+ WLV ++CPVCR L
Sbjct: 211 DCIVPWLVQHNSCPVCRKEL 230
>AT3G56580.2 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 108 HRGLDP---EIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHA 164
HRG P ID+ PT + K LK + C VC +EF + +P C H++H+
Sbjct: 155 HRGPPPAPKSSIDALPTIKITQ-KHLK--SSDSHCPVCKDEFELKSEAKQMP-CHHIYHS 210
Query: 165 ECVDAWLVNQSTCPVCRANL 184
+C+ WLV ++CPVCR L
Sbjct: 211 DCIVPWLVQHNSCPVCRKEL 230
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 137 LECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCR 181
L C+VCL + E +R +P C H FHA C+D WL Q TCPVC+
Sbjct: 209 LTCSVCLEQVTVGEIVRTLP-CLHQFHAGCIDPWLRQQGTCPVCK 252
>AT3G30460.1 | Symbols: | RING/U-box superfamily protein |
chr3:12104433-12104876 FORWARD LENGTH=147
Length = 147
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 117 DSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQST 176
+ P ++A + ++ R + CA+C E +E L +P C H +H EC+ WL N++T
Sbjct: 77 EELPVVEFTAEEMME--RGLVVCAICREELAANERLSELP-CRHYYHKECISNWLSNRNT 133
Query: 177 CPVCRANL 184
CP+CR N+
Sbjct: 134 CPLCRHNV 141
>AT5G41430.1 | Symbols: | RING/U-box superfamily protein |
chr5:16586119-16586604 REVERSE LENGTH=161
Length = 161
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 131 KIGRATLECAVCLNEFRD-HETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRA 182
K G + C++CL E D HE +R I KC HVFH C+D+WL +CP CR
Sbjct: 109 KEGFDEIGCSICLEELEDGHEIIR-IKKCRHVFHRSCIDSWLKQNRSCPNCRC 160
>AT2G17730.2 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705436 FORWARD LENGTH=253
Length = 253
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 99 FPIGGSNWRHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKC 158
F GGS +GL ++++ P + T C+VCL +F+ ET+R +P C
Sbjct: 160 FDTGGS----KGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHC 215
Query: 159 SHVFHAECVDAWLVNQS-----TCPVCRANL 184
H+FH C+D WL+ T VC A L
Sbjct: 216 HHMFHLPCIDNWLLRHDISTARTSRVCSALL 246
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 114 EIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVN 173
E++D+ PT S +L+C++CL++F + +P C H FH C+ WL
Sbjct: 225 EVVDNLPTVKISE---------SLQCSICLDDFDKGSEAKEMP-CKHKFHIRCIVPWLEL 274
Query: 174 QSTCPVCRANL 184
S+CPVCR L
Sbjct: 275 HSSCPVCRYEL 285
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 114 EIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVN 173
E++D+ PT S +L+C++CL++F + +P C H FH C+ WL
Sbjct: 225 EVVDNLPTVKISE---------SLQCSICLDDFDKGSEAKEMP-CKHKFHIRCIVPWLEL 274
Query: 174 QSTCPVCRANL 184
S+CPVCR L
Sbjct: 275 HSSCPVCRYEL 285
>AT3G61460.1 | Symbols: BRH1 | brassinosteroid-responsive RING-H2 |
chr3:22741701-22742213 REVERSE LENGTH=170
Length = 170
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 139 CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLV-NQSTCPVCRANLLQGDAATTF 193
CAVCL EF + +R + C H+FH C+D W+ +Q TCP+CR + + F
Sbjct: 94 CAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHDQKTCPLCRTPFVPDEMQEEF 149
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 116 IDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQS 175
ID+ PT + + + C VC +EF + +P C+H++H++C+ WLV +
Sbjct: 170 IDALPTI---KIAQRHLRSSDSNCPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQHN 225
Query: 176 TCPVCRANL 184
+CPVCR L
Sbjct: 226 SCPVCRQEL 234
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 116 IDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQS 175
ID+ PT + + + C VC +EF + +P C+H++H++C+ WLV +
Sbjct: 170 IDALPTI---KIAQRHLRSSDSNCPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQHN 225
Query: 176 TCPVCRANL 184
+CPVCR L
Sbjct: 226 SCPVCRQEL 234
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 116 IDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQS 175
ID+ PT + + + C VC +EF + +P C+H++H++C+ WLV +
Sbjct: 170 IDALPTI---KIAQRHLRSSDSNCPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQHN 225
Query: 176 TCPVCRANL 184
+CPVCR L
Sbjct: 226 SCPVCRQEL 234
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 114 EIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVN 173
+++D P +Y+ + +C +CL E+ + +++R +P C H FH CVD WL
Sbjct: 469 DVVDLLPIKLYTKSQSEDPS----QCYICLVEYEEADSIRTLP-CHHEFHKTCVDKWLKE 523
Query: 174 -QSTCPVCRANLLQGD 188
CP+CR ++ + D
Sbjct: 524 IHRVCPLCRGDICRHD 539
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 138 ECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQG 187
+C +CL+ + D L +P C+H FH+ C+ WL ++TCP+C+ N+L+G
Sbjct: 306 DCCICLSSYEDGAELHALP-CNHHFHSTCIVKWLKMRATCPLCKYNILKG 354
>AT1G53190.2 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 136 TLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLL 185
T C +C F++ E + + C H +HAEC++ WL+ ++ CP+C++ L
Sbjct: 439 TEPCTICQESFKNEEKIATL-DCGHEYHAECLEKWLIVKNVCPICKSEAL 487
>AT1G53190.1 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 136 TLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLL 185
T C +C F++ E + + C H +HAEC++ WL+ ++ CP+C++ L
Sbjct: 439 TEPCTICQESFKNEEKIATL-DCGHEYHAECLEKWLIVKNVCPICKSEAL 487
>AT3G43430.1 | Symbols: | RING/U-box superfamily protein |
chr3:15354758-15355261 REVERSE LENGTH=167
Length = 167
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 9/56 (16%)
Query: 139 CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWL---------VNQSTCPVCRANLL 185
CAVCL + D + +R + C+HVFH +C+D WL N TCP+CR LL
Sbjct: 83 CAVCLGDLEDEDEIRELRNCTHVFHRDCIDRWLDYECCGGDDDNHRTCPLCRTPLL 138
>AT3G10815.1 | Symbols: | RING/U-box superfamily protein |
chr3:3385009-3385608 REVERSE LENGTH=199
Length = 199
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 125 SAVKGLKIGRATL----ECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVC 180
++++ +KI + L C VC ++F R +P C H++H+EC+ WLV ++TCPVC
Sbjct: 103 NSLQKIKIRQKHLGLDPYCPVCQDQFEIGSDARKMP-CKHIYHSECILPWLVQRNTCPVC 161
Query: 181 RANLLQ 186
R L Q
Sbjct: 162 RKELPQ 167
>AT3G60080.1 | Symbols: | RING/U-box superfamily protein |
chr3:22187635-22188555 FORWARD LENGTH=306
Length = 306
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 116 IDSFPTFVYSAVKGLKIGRA----TLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWL 171
IDS PT S+ + L CAVC +F E+ R +P CSH++H++C+ WL
Sbjct: 142 IDSIPTIQISSSLLCSTDDSDPDSVLLCAVCKEDFIIGESARRLP-CSHIYHSDCIVPWL 200
Query: 172 VNQSTCPVCRANL 184
+ ++CP+CR L
Sbjct: 201 SDHNSCPLCRFEL 213
>AT1G51930.1 | Symbols: | RING/U-box superfamily protein |
chr1:19294838-19295236 REVERSE LENGTH=132
Length = 132
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 139 CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCR 181
C +CL E+ D +R + C HVFH C+D+WL + CP CR
Sbjct: 80 CPICLEEYEDDHQIRRLRNCGHVFHLLCIDSWLTQKQNCPSCR 122
>AT3G47180.1 | Symbols: | RING/U-box superfamily protein |
chr3:17372821-17373453 REVERSE LENGTH=210
Length = 210
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 107 RHRGLDPEIIDSF---PTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFH 163
+RGL P I + T+V+S K +I R C VC EF + E+L ++ C H +H
Sbjct: 132 ENRGLTPIEISTCLNASTYVFSHNKN-EIDR----CVVCQMEFEERESLVVLRPCDHPYH 186
Query: 164 AECVDAWLVNQSTCPVC 180
+EC+ WL + CP+C
Sbjct: 187 SECITKWLETKKICPIC 203
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 138 ECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQGD 188
+C +CL+ + D L +P C+H FH+ C+ WL +TCP+C+ N+L+G+
Sbjct: 291 DCCICLSSYEDGAELVSLP-CNHHFHSTCIVKWLKMNATCPLCKFNILKGN 340
>AT2G15580.1 | Symbols: | RING/U-box superfamily protein |
chr2:6797687-6798815 FORWARD LENGTH=196
Length = 196
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 134 RATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANL 184
R +CA+CL+ F+ ETL +P C+H FH+ C+ WL CP CR ++
Sbjct: 145 REQQDCAICLDRFKKGETLVHLP-CAHKFHSICLLPWLDTNVYCPYCRTDI 194
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 137 LECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCR 181
++C++C E+ D + L IP C H++H CV WL ++ CP+C+
Sbjct: 473 IKCSICQEEYVDGDELGTIP-CQHMYHVSCVQQWLRMKNWCPICK 516
>AT5G20885.1 | Symbols: | RING/U-box superfamily protein |
chr5:7084133-7084663 REVERSE LENGTH=176
Length = 176
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 15/68 (22%)
Query: 139 CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWL---------------VNQSTCPVCRAN 183
CAVCL + D + +R + CSH+FH EC+D WL N TCP+CR
Sbjct: 82 CAVCLGDLEDGDEVRELRNCSHMFHRECIDRWLDYECCGGDENNEGEEDNHRTCPLCRTP 141
Query: 184 LLQGDAAT 191
LL + +
Sbjct: 142 LLAANTTS 149
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 137 LECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCR 181
++C++C E+ D + L IP C H++H CV WL ++ CP+C+
Sbjct: 473 IKCSICQEEYVDGDELGTIP-CQHMYHVSCVQQWLRMKNWCPICK 516
>AT5G15820.1 | Symbols: | RING/U-box superfamily protein |
chr5:5161787-5162833 FORWARD LENGTH=348
Length = 348
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 125 SAVKGLKIGRATLE--------CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQST 176
S V GL T+E CA+C +E E ++ +P C H +H EC+ WL ++T
Sbjct: 269 SVVDGLPDVELTIEELSSVSIVCAICKDEVVFKEKVKRLP-CKHYYHGECIIPWLGIRNT 327
Query: 177 CPVCRANL 184
CPVCR L
Sbjct: 328 CPVCRHEL 335
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 137 LECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANL 184
L+C+VCL++F + +P C H FH C+ WL S+CPVCR L
Sbjct: 257 LQCSVCLDDFEKGTEAKEMP-CKHKFHVRCIVPWLELHSSCPVCRFEL 303
>AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein |
chr5:7092663-7094310 REVERSE LENGTH=310
Length = 310
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 114 EIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVN 173
E+++ P +++ K G A EC +C + ++ +P C H FH C+ WL
Sbjct: 206 EVVEKLPVIIFTEELLKKFG-AEAECCICKENLVIGDKMQELP-CKHTFHPPCLKPWLDE 263
Query: 174 QSTCPVCRANL 184
++CP+CR L
Sbjct: 264 HNSCPICRHEL 274
>AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr4:6041652-6043681 REVERSE
LENGTH=448
Length = 448
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 115 IIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWL-VN 173
+I PT +++ + ++ C +CL + + LR++P C H FH CVD WL
Sbjct: 212 MIIRMPTTIFNGI--CDEATTSILCCICLENYEKGDKLRILP-CHHKFHVACVDLWLGQR 268
Query: 174 QSTCPVCR 181
+S CPVC+
Sbjct: 269 KSFCPVCK 276
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 138 ECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLL 185
EC +CL EF +R +P C+H FH EC+D WL CP CR ++
Sbjct: 234 ECLICLEEFHIGHEVRGLP-CAHNFHVECIDQWLRLNVKCPRCRCSVF 280
>AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 |
chr5:25944338-25945342 REVERSE LENGTH=334
Length = 334
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 116 IDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQS 175
I++ TF S+ +G + + CAVC + ET + +P C H +H +C+ WL ++
Sbjct: 238 IEALETFEVSSSEGEMV----MVCAVCKDGMVMGETGKKLP-CGHCYHGDCIVPWLGTRN 292
Query: 176 TCPVCRANLLQGDA 189
+CPVCR L DA
Sbjct: 293 SCPVCRFQLETDDA 306
>AT4G38140.1 | Symbols: | RING/U-box superfamily protein |
chr4:17899868-17900305 REVERSE LENGTH=145
Length = 145
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 139 CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLV-NQSTCPVCRANLL 185
C +CL EF + + +P+C+H+FH C++ WL+ TCP+CR+ +L
Sbjct: 62 CPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLCRSFVL 109
>AT3G16090.1 | Symbols: | RING/U-box superfamily protein |
chr3:5456513-5458694 FORWARD LENGTH=492
Length = 492
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 99 FPIGGSNW-RHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPK 157
F I S++ R+R + + D FP + + L AT C +C E + + L
Sbjct: 256 FQIRVSDYLRYRKITSNMNDRFPD---ATPEELTASDAT--CIICREEMTNAKKL----I 306
Query: 158 CSHVFHAECVDAWLVNQSTCPVCRANLLQGDAATT 192
C H+FH C+ +WL Q TCP CRA ++ + AT+
Sbjct: 307 CGHLFHVHCLRSWLERQQTCPTCRALVVPPENATS 341
>AT5G37200.1 | Symbols: | RING/U-box superfamily protein |
chr5:14727832-14728485 FORWARD LENGTH=217
Length = 217
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Query: 127 VKGLKIGRATLE-----CAVCLNEFRD-HETLRLIPKCSHVFHAECVDAWLVNQSTCPVC 180
V+ ++ A LE C++C+ +F + HE + +P C H+FH C+ WL Q++CP+C
Sbjct: 142 VEEQRVESADLEEEDETCSICIEKFSESHEDIIRVPDCLHLFHQGCLFEWLGLQNSCPLC 201
Query: 181 R 181
R
Sbjct: 202 R 202
>AT1G65040.1 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24161992 REVERSE LENGTH=281
Length = 281
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 99 FPIGGSNW-RHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPK 157
F I +++ R+R + + D FP + + L AT C +C E + L
Sbjct: 77 FKIRVTDYLRYRKITSNMNDRFPD---ATPEELSSNDAT--CIICREEMTSAKKL----V 127
Query: 158 CSHVFHAECVDAWLVNQSTCPVCRANLLQGDAATT 192
C H+FH C+ +WL Q+TCP CRA ++ + AT+
Sbjct: 128 CGHLFHVHCLRSWLERQNTCPTCRALVVPAENATS 162
>AT5G41350.1 | Symbols: | RING/U-box superfamily protein |
chr5:16542026-16543092 REVERSE LENGTH=212
Length = 212
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 138 ECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLL 185
+C +CL E+ D E +L+ KC H FH C+ W+ TCPVC ++
Sbjct: 160 DCPICLEEY-DIENPKLVAKCDHHFHLACILEWMERSETCPVCNKEMV 206
>AT5G37270.1 | Symbols: | RING/U-box superfamily protein |
chr5:14757933-14758559 REVERSE LENGTH=208
Length = 208
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 139 CAVCLNEFRD--HETLRLIPKCSHVFHAECVDAWLVNQSTCPVCR 181
C++CL +F + + + L+P C H+FH C+ WL Q +CP+CR
Sbjct: 153 CSICLEDFSESHDDNIILLPDCFHLFHQSCIFEWLKRQRSCPLCR 197
>AT1G65040.3 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=389
Length = 389
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 99 FPIGGSNW-RHRGLDPEIIDSFPTFVYSAVKGLKIGRATLECAVCLNEFRDHETLRLIPK 157
F I +++ R+R + + D FP + + L AT C +C E + L
Sbjct: 185 FKIRVTDYLRYRKITSNMNDRFPD---ATPEELSSNDAT--CIICREEMTSAKKL----V 235
Query: 158 CSHVFHAECVDAWLVNQSTCPVCRANLLQGDAATT 192
C H+FH C+ +WL Q+TCP CRA ++ + AT+
Sbjct: 236 CGHLFHVHCLRSWLERQNTCPTCRALVVPAENATS 270
>AT1G70910.1 | Symbols: DEP | RING/U-box superfamily protein |
chr1:26734155-26734640 FORWARD LENGTH=161
Length = 161
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 139 CAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQGD 188
C +CL E + L +P C+HVFH +C+D WL + CP+C ++ D
Sbjct: 114 CGLCLLE---EQHLFDMPNCAHVFHGDCIDKWLSTSNNCPLCGVEIMDDD 160
>AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A |
chr1:5193703-5194170 REVERSE LENGTH=155
Length = 155
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 138 ECAVCLNEFRDHETLRLIPKCSHVFHAECVDAWLVN-QSTCPVCRANLLQGDAAT 191
+C VCL++ ++ E +R + +C HVFH +C++ WL TCP+CR+ L+ D +
Sbjct: 85 DCVVCLSKLKEGEEVRKL-ECRHVFHKKCLEGWLHQFNFTCPLCRSALVSDDCVS 138
>AT5G37250.1 | Symbols: | RING/U-box superfamily protein |
chr5:14750393-14750971 FORWARD LENGTH=192
Length = 192
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 139 CAVCLNEFRD--HETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQGDAAT 191
C++CL +F + + + L+P C H+FH C+ WL Q +CP+CR + D T
Sbjct: 137 CSICLEDFSESHDDNIILLPDCFHLFHQNCIFEWLKRQRSCPLCRRVPYEEDLET 191
>AT5G37230.1 | Symbols: | RING/U-box superfamily protein |
chr5:14735154-14735780 FORWARD LENGTH=208
Length = 208
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 139 CAVCLNEFRD--HETLRLIPKCSHVFHAECVDAWLVNQSTCPVCRANLLQGDAAT 191
C++C+ +F + + + L+P C H+FH C+ WL Q +CP+CR + D T
Sbjct: 153 CSICMEDFSESHDDNIILLPDCFHLFHQSCIFKWLKRQRSCPLCRRVPYEEDLET 207