Miyakogusa Predicted Gene
- Lj1g3v1525930.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1525930.2 Non Chatacterized Hit- tr|I1MAX1|I1MAX1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,61.1,0,HLH,Helix-loop-helix domain; no
description,Helix-loop-helix domain; helix loop helix
domain,Helix-l,CUFF.27462.2
(305 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G72210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 254 6e-68
AT1G22490.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 239 2e-63
AT4G01460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 181 6e-46
AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 174 5e-44
AT5G65320.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 172 2e-43
AT5G46690.1 | Symbols: bHLH071 | beta HLH protein 71 | chr5:1894... 172 2e-43
AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 172 3e-43
AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 172 3e-43
AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH) DNA-b... 171 8e-43
AT3G06120.1 | Symbols: MUTE | basic helix-loop-helix (bHLH) DNA-... 135 4e-32
AT5G53210.1 | Symbols: SPCH | basic helix-loop-helix (bHLH) DNA-... 99 4e-21
AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 64 2e-10
AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 63 3e-10
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 61 9e-10
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 61 9e-10
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 61 9e-10
AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 60 2e-09
AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHL... 59 4e-09
AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 58 7e-09
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |... 58 8e-09
AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 57 2e-08
AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 56 2e-08
AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 55 4e-08
AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 55 4e-08
AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 55 5e-08
AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 55 5e-08
AT1G49770.1 | Symbols: RGE1, ZOU | basic helix-loop-helix (bHLH)... 54 9e-08
AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type tran... 54 1e-07
AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHL... 54 1e-07
AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-b... 54 1e-07
AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 2e-07
AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 2e-07
AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 2e-07
AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 2e-07
AT4G21330.1 | Symbols: DYT1 | basic helix-loop-helix (bHLH) DNA-... 51 9e-07
>AT1G72210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:27180066-27182268 FORWARD
LENGTH=320
Length = 320
Score = 254 bits (648), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 154/332 (46%), Positives = 189/332 (56%), Gaps = 39/332 (11%)
Query: 1 MAFEAVVFPQDPAFTY-GCKN----DYFFSATTAVGAWGTNNNNYGLLQAAXXXXXXXXX 55
MA EAVV+PQDP F+Y CK+ D +F T NN L Q
Sbjct: 1 MALEAVVYPQDP-FSYISCKDFPFYDLYFQEEEDQDPQDTKNN-IKLGQGQGHGFASNNY 58
Query: 56 XXXXXXXXMDQEQNLHSNNW----------DSSSHTSPEACTFDQXXXXXXXXXXXXXXX 105
D N W D+ S P
Sbjct: 59 NGRTGDYSDDYNYNEEDLQWPRDLPYGSAVDTESQPPPSDVA--------AGGGRRKRRR 110
Query: 106 XXXAKNMEEIENQRMTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFV 165
+KN EEIENQRMTHIAVERNRRKQMNEYL+ LRSLMP Y QRGDQASI+GGAIN++
Sbjct: 111 TRSSKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYL 170
Query: 166 KELEQLLQSME------------GQKKTDQPGSSPLPPFAEFFVFPQYTTRAATHSNDTN 213
KELE LQSME G +T +S PF++FF FPQY+ R + +
Sbjct: 171 KELEHHLQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAA--AA 228
Query: 214 MGVADIEVTLVDSHANLKILSKKRRGNLMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSL 273
G+A+IEVT+V+SHA+LKIL+KKR L+K++ IQSL LT+LHLNVTT DD VLYS+S+
Sbjct: 229 EGMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISV 288
Query: 274 KVEEECQLSTVDEIAAAVNQLLSMVGEEVTFS 305
KVEE QL+TV++IAAAVNQ+L + EE +FS
Sbjct: 289 KVEEGSQLNTVEDIAAAVNQILRRIEEESSFS 320
>AT1G22490.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:7938448-7940489 REVERSE
LENGTH=304
Length = 304
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/317 (44%), Positives = 188/317 (59%), Gaps = 30/317 (9%)
Query: 1 MAFEAVVFPQDP-AFTYGCKNDYF---FSATTAVGAWGTNN-----NNYGLLQAAXXXXX 51
M EAVV+PQDP + CK+ F +S V NN + ++
Sbjct: 1 MPLEAVVYPQDPFGYLSNCKDFMFHDLYSQEEFVAQDTKNNIDKLGHEQSFVEQGKEDDH 60
Query: 52 XXXXXXXXXXXXMDQEQNLHSNNWDSSSHTSPEACTFDQXXXXXXXXXXXXXXXXXXAKN 111
+ L D SH P+ KN
Sbjct: 61 QWRDYHQYPLLIPSLGEELGLTAIDVESHPPPQHRR--------------KRRRTRNCKN 106
Query: 112 MEEIENQRMTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQL 171
EEIENQRMTHIAVERNRRKQMNEYL+ LRSLMPSSY QRGDQASI+GGAIN+VKELE +
Sbjct: 107 KEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHI 166
Query: 172 LQSMEGQK-KTDQPG------SSPLPPFAEFFVFPQYTTRAATHSNDTNMGVADIEVTLV 224
LQSME ++ +T P SS + PF +FF FPQY+T++++ +++ A+IEVT+
Sbjct: 167 LQSMEPKRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPESSSSPAEIEVTVA 226
Query: 225 DSHANLKILSKKRRGNLMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSLKVEEECQLSTV 284
+SHAN+KI++KK+ L+K+I +QSL LT+LHLNVTT+ + +LYS+S++VEE QL+TV
Sbjct: 227 ESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEGSQLNTV 286
Query: 285 DEIAAAVNQLLSMVGEE 301
D+IA A+NQ + + EE
Sbjct: 287 DDIATALNQTIRRIQEE 303
>AT4G01460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:621334-622697 FORWARD
LENGTH=315
Length = 315
Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 135/206 (65%), Gaps = 10/206 (4%)
Query: 110 KNMEEIENQRMTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELE 169
KN +E+ENQRMTHIAVERNRR+QMNE+L++LRSLMP S++QRGDQASI+GGAI+F+KELE
Sbjct: 105 KNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELE 164
Query: 170 QLLQSMEGQKKTDQPGSSP-------LPPFAEFFVFPQYTTRAATHSNDTNMGVAD---I 219
QLLQS+E +K+ D +P A + + + G D +
Sbjct: 165 QLLQSLEAEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFGGGDTTEV 224
Query: 220 EVTLVDSHANLKILSKKRRGNLMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSLKVEEEC 279
E T++ +H +LK+ K+ + ++K I I+ L L ILHL +++ D V+YS +LK+E+ C
Sbjct: 225 EATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKMEDGC 284
Query: 280 QLSTVDEIAAAVNQLLSMVGEEVTFS 305
+L + DEIA AV+Q+ + EV +S
Sbjct: 285 KLGSADEIATAVHQIFEQINGEVMWS 310
>AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:19239694-19242373 FORWARD
LENGTH=371
Length = 371
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 129/188 (68%), Gaps = 5/188 (2%)
Query: 111 NMEEIENQRMTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQ 170
N+EEIE+QRMTHIAVERNRR+QMN +L++LRS++PSSY+QRGDQASI+GGAI+FVK LEQ
Sbjct: 184 NIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQ 243
Query: 171 LLQSMEGQKKTDQPGSSP--LPPFAEFFVFPQYTTRAATHSNDTNMGVADIEVTLVDSHA 228
LQS+E QK++ Q + +P RA+ + IE T+++SH
Sbjct: 244 QLQSLEAQKRSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQS--SKLKIEATVIESHV 301
Query: 229 NLKILSKKRRGNLMKIIGGIQSLSLTILHLNVTT-VDDLVLYSVSLKVEEECQLSTVDEI 287
NLKI +++G L++ I ++ L T+LHLN+T+ + V YS +LK+E+EC L + DEI
Sbjct: 302 NLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMEDECNLGSADEI 361
Query: 288 AAAVNQLL 295
AA+ Q+
Sbjct: 362 TAAIRQIF 369
>AT5G65320.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:26107368-26108640 REVERSE
LENGTH=296
Length = 296
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 138/205 (67%), Gaps = 14/205 (6%)
Query: 110 KNMEEIENQRMTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELE 169
K + + ENQRM HIAVERNRRKQMN +LS L+S+MP SY Q DQASII G I+++K+LE
Sbjct: 92 KTIVDKENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKLE 151
Query: 170 QLLQSMEGQKKTDQPGSSPLPPFAEFFVFPQYTTRAATHSNDTNMG------------VA 217
Q LQS+E Q K + SP F++FF+FPQY+T AT + + VA
Sbjct: 152 QRLQSLEAQLKATKLNQSP-NIFSDFFMFPQYSTATATATATASSSSSSHHHHKRLEVVA 210
Query: 218 DIEVTLVDSHANLKILSKKRRGNLMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSLKVEE 277
D+EVT+V+ HAN+K+L+K + L KII SL L+ LHLN+TT D+ L++ S+KVE
Sbjct: 211 DVEVTMVERHANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLFTFSVKVEA 270
Query: 278 ECQLS-TVDEIAAAVNQLLSMVGEE 301
+CQL+ + +E+A V++++ V +E
Sbjct: 271 DCQLTPSGNEVANTVHEVVRRVHKE 295
>AT5G46690.1 | Symbols: bHLH071 | beta HLH protein 71 |
chr5:18945639-18947434 FORWARD LENGTH=327
Length = 327
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/229 (49%), Positives = 150/229 (65%), Gaps = 39/229 (17%)
Query: 109 AKNMEEIENQRMTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKEL 168
KN EE ENQRMTHIAVERNRR+QMN++LS LRSLMP + +GDQASI+GGAI+F+KEL
Sbjct: 77 CKNEEEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKEL 136
Query: 169 EQLLQSMEGQK----KTDQPGSS------------PLPP----FAEFFVF---PQYTTR- 204
E L S+E QK K +Q +S P P ++FF+ P R
Sbjct: 137 EHKLLSLEAQKHHNAKLNQSVTSSTSQDSNGEQENPHQPSSLSLSQFFLHSYDPSQENRN 196
Query: 205 AATHSNDTNMGVADIEVTLVDSHANLKILSKKRRG------------NLMKIIGGIQSLS 252
+T S T M D+EVTL+++HAN++ILS +RRG L K++ +QSLS
Sbjct: 197 GSTSSVKTPM--EDLEVTLIETHANIRILS-RRRGFRWSTLATTKPPQLSKLVASLQSLS 253
Query: 253 LTILHLNVTTVDDLVLYSVSLKVEEECQLSTVDEIAAAVNQLLSMVGEE 301
L+ILHL+VTT+D+ +YS+S KVEE CQLS+VD+IA AV+ +LS++ EE
Sbjct: 254 LSILHLSVTTLDNYAIYSISAKVEESCQLSSVDDIAGAVHHMLSIIEEE 302
>AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22939661-22941332 FORWARD
LENGTH=358
Length = 358
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/196 (47%), Positives = 135/196 (68%), Gaps = 14/196 (7%)
Query: 109 AKNMEEIENQRMTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKEL 168
+KN EEIENQR+ HIAVERNRR+QMNE++++LR+L+P SY+QRGDQASI+GGAIN+VK L
Sbjct: 167 SKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVL 226
Query: 169 EQLLQSMEGQKKTDQPGSSPLPPFAEFFVFPQYTTRAATHSNDTNMGVAD------IEVT 222
EQ++QS+E QK+T Q +S + A + SND + D IE T
Sbjct: 227 EQIIQSLESQKRTQQQSNSEVVENA-------LNHLSGISSNDLWTTLEDQTCIPKIEAT 279
Query: 223 LVDSHANLKILSKKRRGNLMKIIGGIQSLSLTILHLNVTT-VDDLVLYSVSLKVEEECQL 281
++ +H +LK+ +K++G L+K I ++ L LT+LHLN+TT V YS +LK+E+EC L
Sbjct: 280 VIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKMEDECDL 339
Query: 282 STVDEIAAAVNQLLSM 297
+ DEI AAV+++ +
Sbjct: 340 ESADEITAAVHRIFDI 355
>AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22940231-22941332 FORWARD
LENGTH=307
Length = 307
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/196 (47%), Positives = 135/196 (68%), Gaps = 14/196 (7%)
Query: 109 AKNMEEIENQRMTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKEL 168
+KN EEIENQR+ HIAVERNRR+QMNE++++LR+L+P SY+QRGDQASI+GGAIN+VK L
Sbjct: 116 SKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVL 175
Query: 169 EQLLQSMEGQKKTDQPGSSPLPPFAEFFVFPQYTTRAATHSNDTNMGVAD------IEVT 222
EQ++QS+E QK+T Q +S + A + SND + D IE T
Sbjct: 176 EQIIQSLESQKRTQQQSNSEVVENA-------LNHLSGISSNDLWTTLEDQTCIPKIEAT 228
Query: 223 LVDSHANLKILSKKRRGNLMKIIGGIQSLSLTILHLNVTT-VDDLVLYSVSLKVEEECQL 281
++ +H +LK+ +K++G L+K I ++ L LT+LHLN+TT V YS +LK+E+EC L
Sbjct: 229 VIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKMEDECDL 288
Query: 282 STVDEIAAAVNQLLSM 297
+ DEI AAV+++ +
Sbjct: 289 ESADEITAAVHRIFDI 304
>AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr3:8715525-8717772
REVERSE LENGTH=414
Length = 414
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 133/214 (62%), Gaps = 27/214 (12%)
Query: 109 AKNMEEIENQRMTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKEL 168
+K EE+E+QRMTHIAVERNRRKQMNE+L LRSLMP SYVQRGDQASIIGGAI FV+EL
Sbjct: 186 SKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVREL 245
Query: 169 EQLLQSMEGQKKTDQPGSS----------------PLPPFAEFFVFPQYTT--------R 204
EQLLQ +E QK+ G + + A+ + T R
Sbjct: 246 EQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGGGGLR 305
Query: 205 AATHSNDTNMGVADIEVTLVDSHANLKILSKKRRGNLMKIIGGIQSLSLTILHLNVTTVD 264
T N + + AD+EV L+ A +KILS++R G L+K I ++ L L+ILH N+TT++
Sbjct: 306 EETAENKSCL--ADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTME 363
Query: 265 DLVLYSVSLKVEEECQLSTVDEIAAAVNQLLSMV 298
VLYS ++K+ E + T ++IA+++ Q+ S +
Sbjct: 364 QTVLYSFNVKITSETRF-TAEDIASSIQQIFSFI 396
>AT3G06120.1 | Symbols: MUTE | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr3:1846531-1848016
FORWARD LENGTH=202
Length = 202
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 123/204 (60%), Gaps = 22/204 (10%)
Query: 120 MTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEGQK 179
M+HIAVERNRR+QMNE+L +LRSL P Y++RGDQASIIGG I F+KEL+QL+Q +E K
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLES-K 59
Query: 180 KTDQPGSSPLPPFAEFFVFPQ----YTTRAA--------THSNDTNMGV------ADIEV 221
K + + P P+ + P TTR T S +G A++E
Sbjct: 60 KRRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEA 119
Query: 222 TLVDSHANLKILSKKRRGNLMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSLKVEEECQL 281
+ S+ L+++S++ G L+KII ++ LS +LHLN++++++ VLY +K+ EC L
Sbjct: 120 KISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKIGLECHL 179
Query: 282 STVDEIAAAVNQLLSMVGEEVTFS 305
S ++E+ V + S V +EV S
Sbjct: 180 S-LEELTLEVQK--SFVSDEVIVS 200
>AT5G53210.1 | Symbols: SPCH | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:21586606-21588941
REVERSE LENGTH=364
Length = 364
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 55/63 (87%)
Query: 118 QRMTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEG 177
Q+M+H+ VERNRRKQMNE+L+ LRSLMP YV+RGDQASIIGG + ++ EL+Q+LQS+E
Sbjct: 100 QKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEA 159
Query: 178 QKK 180
+K+
Sbjct: 160 KKQ 162
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 211 DTNMGVADIEVTLVDSHANLKILSKKRRGNLMKIIGGIQSLSLTILHLNVTTVDDLVLYS 270
++ +AD+EV ++ LK +S K G +MKII ++ L+L IL +N+ TVD+ +L S
Sbjct: 280 NSKSALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINTVDETMLNS 339
Query: 271 VSLKVEEECQLSTVDEIAAAVNQ 293
++K+ ECQLS +E+A + Q
Sbjct: 340 FTIKIGIECQLSA-EELAQQIQQ 361
>AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17796362-17797647 REVERSE
LENGTH=328
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 93/169 (55%), Gaps = 3/169 (1%)
Query: 122 HIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEGQKKT 181
HI ER RR+++ + AL +L+P +++ D+AS++G A+ +K L++ + +E QKK
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPG--LKKMDKASVLGDALKHIKYLQERVGELEEQKKE 210
Query: 182 DQPGSSPLPPFAEFFVFPQYTTRAATHSND-TNMGVADIEVTLVDSHANLKILSKKRRGN 240
+ S L ++ + + +++ + +++ + +IEV D +KIL +K++G+
Sbjct: 211 RRLESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILCEKQKGH 270
Query: 241 LMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSLKVEEECQLSTVDEIAA 289
L KI+ I+ L + I + +V + ++ K E + ++ +D + +
Sbjct: 271 LAKIMAEIEKLHILITNSSVLNFGPTLDITIIAKKESDFDMTLMDVVKS 319
>AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr4:9933702-9935471 REVERSE LENGTH=589
Length = 589
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 92/181 (50%), Gaps = 8/181 (4%)
Query: 120 MTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEGQK 179
+ H+ ER RR+++N+ +LR+++P+ V + D+AS++G AI+++ EL+ LQ E K
Sbjct: 415 LNHVEAERQRREKLNQRFYSLRAVVPN--VSKMDKASLLGDAISYISELKSKLQKAESDK 472
Query: 180 KTDQPGSSPLPPFAEFFVFPQYTTRAATHSNDTNMGVADIEVTLVDSHANLKILSKKRRG 239
+ Q + A R + + + +++V ++ A ++I KR
Sbjct: 473 EELQKQIDVMNKEA-GNAKSSVKDRKCLNQESSVLIEMEVDVKIIGWDAMIRIQCSKRNH 531
Query: 240 NLMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSLKVEEECQLSTVDEIAAAVNQLLSMVG 299
K + ++ L L + H +++ V+DL++ ++K+ Q T D++ A L VG
Sbjct: 532 PGAKFMEALKELDLEVNHASLSVVNDLMIQQATVKMGN--QFFTQDQLKVA---LTEKVG 586
Query: 300 E 300
E
Sbjct: 587 E 587
>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 15/181 (8%)
Query: 122 HIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEGQKKT 181
++ ER RRK++N+ L LRS++P + + D+ASI+G AI+++KEL Q + + + ++
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDLHNELES 365
Query: 182 DQPGSSPLPP----FAEFFVFPQ-YTTRAATHSNDTNMGV-----ADIEVTLVDSHA-NL 230
PGS LPP F PQ + R +++ A +EV L + A N+
Sbjct: 366 TPPGS--LPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNI 423
Query: 231 KILSKKRRGNLMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSLKVEEECQLSTVDEIAAA 290
+ +R G L+ + + +L L + ++ + L + +E Q D+I A
Sbjct: 424 HMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIKAV 483
Query: 291 V 291
+
Sbjct: 484 L 484
>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 15/181 (8%)
Query: 122 HIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEGQKKT 181
++ ER RRK++N+ L LRS++P + + D+ASI+G AI+++KEL Q + + + ++
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDLHNELES 365
Query: 182 DQPGSSPLPP----FAEFFVFPQ-YTTRAATHSNDTNMGV-----ADIEVTLVDSHA-NL 230
PGS LPP F PQ + R +++ A +EV L + A N+
Sbjct: 366 TPPGS--LPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNI 423
Query: 231 KILSKKRRGNLMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSLKVEEECQLSTVDEIAAA 290
+ +R G L+ + + +L L + ++ + L + +E Q D+I A
Sbjct: 424 HMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIKAV 483
Query: 291 V 291
+
Sbjct: 484 L 484
>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 15/181 (8%)
Query: 122 HIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEGQKKT 181
++ ER RRK++N+ L LRS++P + + D+ASI+G AI+++KEL Q + + + ++
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDLHNELES 365
Query: 182 DQPGSSPLPP----FAEFFVFPQ-YTTRAATHSNDTNMGV-----ADIEVTLVDSHA-NL 230
PGS LPP F PQ + R +++ A +EV L + A N+
Sbjct: 366 TPPGS--LPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNI 423
Query: 231 KILSKKRRGNLMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSLKVEEECQLSTVDEIAAA 290
+ +R G L+ + + +L L + ++ + L + +E Q D+I A
Sbjct: 424 HMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIKAV 483
Query: 291 V 291
+
Sbjct: 484 L 484
>AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154872 FORWARD
LENGTH=247
Length = 247
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 90/167 (53%), Gaps = 10/167 (5%)
Query: 122 HIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFV-------KELEQLLQS 174
+I ERNRR+++N+ L ALRS++P+ + + D+ASII AI+++ K+LE ++
Sbjct: 55 NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 112
Query: 175 MEGQKKTDQPGSSPLPPFAEFFVFPQYTTRAATHSNDTNMGVADIEVTLVDSHANL-KIL 233
+E K+ S V + + + S+ + + V +++VT + + +
Sbjct: 113 LESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVT 172
Query: 234 SKKRRGNLMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSLKVEEECQ 280
KR ++K+ +SL+L IL N+T+ ++ ++V ++ +EE Q
Sbjct: 173 CNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEEEQ 219
>AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:4384758-4386392
FORWARD LENGTH=450
Length = 450
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 84/164 (51%), Gaps = 10/164 (6%)
Query: 122 HIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEGQKKT 181
++ ER RRK++N+ L LRS++P + + D+ASI+G AI+++KEL Q + + + ++
Sbjct: 268 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDLHTELES 325
Query: 182 DQPGSS---PLPPFAEFFVFPQYTTRAATHSNDTNMG-VADIEVTLVDSHA-NLKILSKK 236
P SS PL P + + + S + G +EV L + A N+ + +
Sbjct: 326 TPPSSSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVEVRLREGKAVNIHMFCGR 385
Query: 237 RRGNLMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSLKVEEECQ 280
R G L+ + + +L L + ++ + +++ + E+CQ
Sbjct: 386 RPGLLLSTMRALDNLGLDVQQAVISCFNG---FALDVFRAEQCQ 426
>AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr5:18974231-18976009 FORWARD
LENGTH=592
Length = 592
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 95/184 (51%), Gaps = 10/184 (5%)
Query: 120 MTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEGQK 179
+ H+ ER RR+++N+ +LR+++P+ V + D+AS++G AI+++ EL+ LQ E K
Sbjct: 414 LNHVEAERQRREKLNQRFYSLRAVVPN--VSKMDKASLLGDAISYINELKSKLQQAESDK 471
Query: 180 KTDQPGSSPLPPFAE--FFVFPQYTTRAATHSNDTNMGVA-DIEVTLVDSHANLKILSKK 236
+ Q + + R +++ + T + +I+V ++ +++ K
Sbjct: 472 EEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRVQCGK 531
Query: 237 RRGNLMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSLKVEEECQLSTVDEIAAAVNQLLS 296
+ + + ++ L L + H +++ V+DL++ ++K+ Q D++ A L++
Sbjct: 532 KDHPGARFMEALKELDLEVNHASLSVVNDLMIQQATVKM--GSQFFNHDQLKVA---LMT 586
Query: 297 MVGE 300
VGE
Sbjct: 587 KVGE 590
>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
Basic helix-loop-helix (bHLH) DNA-binding family protein
| chr1:11799042-11800913 REVERSE LENGTH=623
Length = 623
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 90/182 (49%), Gaps = 22/182 (12%)
Query: 120 MTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEGQK 179
+ H+ ER RR+++N+ ALR+++P+ V + D+AS++G AI ++ EL+ + E +K
Sbjct: 451 LNHVEAERQRREKLNQRFYALRAVVPN--VSKMDKASLLGDAIAYINELKSKVVKTESEK 508
Query: 180 KTDQPGSSPLPPFAEFFVFPQYTTRAATHSNDTNMGVA-------DIEVTLVDSHANLKI 232
+ E +A+ D + + +IEV ++ A +++
Sbjct: 509 LQ-------IKNQLEEVKLELAGRKASASGGDMSSSCSSIKPVGMEIEVKIIGWDAMIRV 561
Query: 233 LSKKRRGNLMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSLKV------EEECQLSTVDE 286
S KR +++ + L L + H +++ V+DL++ ++K+ +E+ + S + +
Sbjct: 562 ESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVKMGFRIYTQEQLRASLISK 621
Query: 287 IA 288
I
Sbjct: 622 IG 623
>AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23153293 FORWARD
LENGTH=226
Length = 226
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 87/162 (53%), Gaps = 10/162 (6%)
Query: 122 HIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFV-------KELEQLLQS 174
+I ERNRR+++N+ L ALRS++P+ + + D+ASII AI+++ K+LE ++
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 175 MEGQKKTDQPGSSPLPPFAEFFVFPQYTTRAATHSNDTNMGVADIEVTLVDSHAN-LKIL 233
+E K+ S V + + + S+ + + V +++VT + + +
Sbjct: 114 LESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVT 173
Query: 234 SKKRRGNLMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSLKV 275
KR ++K+ +SL+L IL N+T+ ++ ++V ++V
Sbjct: 174 CNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEV 215
>AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154556 FORWARD
LENGTH=219
Length = 219
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 87/162 (53%), Gaps = 10/162 (6%)
Query: 122 HIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFV-------KELEQLLQS 174
+I ERNRR+++N+ L ALRS++P+ + + D+ASII AI+++ K+LE ++
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 175 MEGQKKTDQPGSSPLPPFAEFFVFPQYTTRAATHSNDTNMGVADIEVTLVDSHAN-LKIL 233
+E K+ S V + + + S+ + + V +++VT + + +
Sbjct: 114 LESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVT 173
Query: 234 SKKRRGNLMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSLKV 275
KR ++K+ +SL+L IL N+T+ ++ ++V +++
Sbjct: 174 CNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEI 215
>AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=304
Length = 304
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 82/143 (57%), Gaps = 6/143 (4%)
Query: 122 HIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEGQKKT 181
HI ER RR+++ + AL +L+P +++ D+AS++G AI +K L++ ++ E QKK
Sbjct: 127 HILAERKRREKLTQRFVALSALIPG--LKKMDKASVLGDAIKHIKYLQESVKEYEEQKKE 184
Query: 182 DQPGSSPLPPFAEFFVF----PQYTTRAATHSNDTNMGVADIEVTLVDSHANLKILSKKR 237
S L + + P ++ + + N ++ + +IEV + +KIL +K+
Sbjct: 185 KTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGKDVLIKILCEKQ 244
Query: 238 RGNLMKIIGGIQSLSLTILHLNV 260
+GN++KI+G I+ L L+I + NV
Sbjct: 245 KGNVIKIMGEIEKLGLSITNSNV 267
>AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154801 FORWARD
LENGTH=264
Length = 264
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 89/165 (53%), Gaps = 16/165 (9%)
Query: 122 HIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFV-------KELEQLLQS 174
+I ERNRR+++N+ L ALRS++P+ + + D+ASII AI+++ K+LE ++
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPN--ITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 175 MEGQKKTDQPGSSPLPPFAEFFVFPQYTTRAA---THSNDTNMGVADIEVTLVDSHAN-L 230
+E K+ S F + P + + + S+ + + V +++VT + +
Sbjct: 114 LESTPKSSLSFSK---DFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVV 170
Query: 231 KILSKKRRGNLMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSLKV 275
+ KR ++K+ +SL+L IL N+T+ ++ ++V +++
Sbjct: 171 SVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEL 215
>AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=305
Length = 305
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 82/143 (57%), Gaps = 6/143 (4%)
Query: 122 HIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEGQKKT 181
HI ER RR+++ + AL +L+P +++ D+AS++G AI +K L++ ++ E QKK
Sbjct: 127 HILAERKRREKLTQRFVALSALIPG--LKKMDKASVLGDAIKHIKYLQESVKEYEEQKKE 184
Query: 182 DQPGSSPLPPFAEFFVF----PQYTTRAATHSNDTNMGVADIEVTLVDSHANLKILSKKR 237
S L + + P ++ + + N ++ + +IEV + +KIL +K+
Sbjct: 185 KTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGKDVLIKILCEKQ 244
Query: 238 RGNLMKIIGGIQSLSLTILHLNV 260
+GN++KI+G I+ L L+I + NV
Sbjct: 245 KGNVIKIMGEIEKLGLSITNSNV 267
>AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=225
Length = 225
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 90/159 (56%), Gaps = 15/159 (9%)
Query: 122 HIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEGQKKT 181
++ ERNRR+++N+ L ALRS++P+ + + D+AS+I +I++++EL +++E + +
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPN--ISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 182 DQPGSSPLP-PFAEFFVFPQYTTRAATHSNDTNMGVADIEVTLV-DSHANLKILSKKRRG 239
+ S+ L P Y+TR + + V +++VT + + + I K+R
Sbjct: 113 LESRSTLLENPM-------DYSTRVQHYP----IEVLEMKVTWMGEKTVVVCITCSKKRE 161
Query: 240 NLMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSLKVEEE 278
++++ ++SL+L IL N ++ + ++ L+ +EE
Sbjct: 162 TMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQADEE 200
>AT1G49770.1 | Symbols: RGE1, ZOU | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:18424578-18426531
FORWARD LENGTH=308
Length = 308
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 110 KNMEEIENQRMTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELE 169
KN EE HI ER RRK+M + S L +L+P + D+++I+ A++ +K LE
Sbjct: 62 KNHEEESPDHEIHIWTERERRKKMRDMFSKLHALLP-QLPPKADKSTIVDEAVSSIKSLE 120
Query: 170 QLLQSMEGQK 179
Q LQ +E QK
Sbjct: 121 QTLQKLEMQK 130
>AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type
transcription factor | chr2:19091187-19092887 REVERSE
LENGTH=566
Length = 566
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Query: 120 MTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEGQK 179
+ H+ ER RR+++N+ ALRS++P+ + + D+AS++G AI+++KEL++ ++ ME ++
Sbjct: 394 LNHVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLGDAISYIKELQEKVKIMEDER 451
>AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:6182067-6186261
FORWARD LENGTH=518
Length = 518
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 85/178 (47%), Gaps = 29/178 (16%)
Query: 120 MTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEGQK 179
++H+ ER RR+++NE LRS++P +V + D+ SI+G I +V L + + +E
Sbjct: 362 LSHVVAERRRREKLNEKFITLRSMVP--FVTKMDKVSILGDTIAYVNHLRKRVHELENTH 419
Query: 180 KTDQPGSSPLPPFAEFFVFPQYTTRAATHSNDTNMGVADIEVTLVDSHANLKILSKKRRG 239
Q R T T+ ++EV+++++ L++ + R G
Sbjct: 420 HEQQ------------------HKRTRTCKRKTS---EEVEVSIIENDVLLEMRCEYRDG 458
Query: 240 NLMKIIGGIQSLSL--TILHLNVTTVDDLVLYSVSLKVEEECQLSTVDEIAAAVNQLL 295
L+ I+ + L + T +H +V D + ++ + + +++ E+ A++Q++
Sbjct: 459 LLLDILQVLHELGIETTAVHTSVNDHD----FEAEIRAKVRGKKASIAEVKRAIHQVI 512
>AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:7331721-7334077
FORWARD LENGTH=571
Length = 571
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 25/177 (14%)
Query: 122 HIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKEL--------EQLLQ 173
++ ER RRK++N+ L ALRSL+P + + D+ASI+G AIN+VKEL ++L +
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVPR--ITKLDRASILGDAINYVKELQNEAKELQDELEE 372
Query: 174 SMEGQKKTDQP-GSSPLPPFAEFFVFPQYTTRAAT----------HSNDTNMGV-ADIEV 221
+ E + +++P G L P + + +SND + ++V
Sbjct: 373 NSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVDV 432
Query: 222 TLVDSHA-NLKILSKKRRGNLMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSLKVEE 277
+D +K++ + + G +++ + SL L + + N T L L S KVE+
Sbjct: 433 AQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRY--LSLVSNVFKVEK 487
>AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 120 MTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEGQK 179
+ H+ ER RR+++N+ ALRS++P+ + + D+AS++G A++++ EL L+ ME ++
Sbjct: 432 LNHVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLGDAVSYINELHAKLKVMEAER 489
Query: 180 KTDQPGSSPLPPFA 193
++ G S PP +
Sbjct: 490 --ERLGYSSNPPIS 501
>AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 120 MTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEGQK 179
+ H+ ER RR+++N+ ALRS++P+ + + D+AS++G A++++ EL L+ ME ++
Sbjct: 432 LNHVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLGDAVSYINELHAKLKVMEAER 489
Query: 180 KTDQPGSSPLPPFA 193
++ G S PP +
Sbjct: 490 --ERLGYSSNPPIS 501
>AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 120 MTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEGQK 179
+ H+ ER RR+++N+ ALRS++P+ + + D+AS++G A++++ EL L+ ME ++
Sbjct: 432 LNHVEAERQRREKLNQRFYALRSVVPN--ISKMDKASLLGDAVSYINELHAKLKVMEAER 489
Query: 180 KTDQPGSSPLPPFA 193
++ G S PP +
Sbjct: 490 --ERLGYSSNPPIS 501
>AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9678012-9679165 FORWARD
LENGTH=295
Length = 295
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 78/137 (56%), Gaps = 6/137 (4%)
Query: 122 HIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMEGQKK- 180
H+ ER RR++++E AL +L+P +++ D+ +I+ AI+ +K+L++ L++++ +K+
Sbjct: 120 HVLAERKRREKLSEKFIALSALLPG--LKKADKVTILDDAISRMKQLQEQLRTLKEEKEA 177
Query: 181 TDQPGSSPLPPFAEFFV--FPQYTTRAATHSNDTNMGVADIEVTLVDSHANLKILSKKRR 238
T Q S L ++ F P + + H + + + +IE + + ++IL +K +
Sbjct: 178 TRQMESMILVKKSKVFFDEEPNLSCSPSVHI-EFDQALPEIEAKISQNDILIRILCEKSK 236
Query: 239 GNLMKIIGGIQSLSLTI 255
G ++ I+ I++ L I
Sbjct: 237 GCMINILNTIENFQLRI 253
>AT4G21330.1 | Symbols: DYT1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:11349922-11350694
FORWARD LENGTH=207
Length = 207
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 93/183 (50%), Gaps = 20/183 (10%)
Query: 109 AKNMEEIENQRMTHIAVERNRRKQMNEYLSALRSLMPSSYVQRGDQASIIGGAINFVKEL 168
K EE EN + ++ ER RR++++ L ALRS +P V +ASI+ AI ++ EL
Sbjct: 20 TKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVP--IVTNMTKASIVEDAITYIGEL 77
Query: 169 EQ----LLQSM----EGQKKTDQPGSSPLPPFAEFFVFPQYTTRAATHSNDTNMGVAD-I 219
+ LL++ E + D+ + P+ + P+ T + + +G+ + +
Sbjct: 78 QNNVKNLLETFHEMEEAPPEIDEEQTDPM-------IKPEVET-SDLNEEMKKLGIEENV 129
Query: 220 EVTLVDSHAN-LKILSKKRRGNLMKIIGGIQSLSLTILHLNVTTVDDLVLYSVSLKVEEE 278
++ + LKI+++KR G K + ++ L I+ +++TT + +L S S++ +E
Sbjct: 130 QLCKIGERKFWLKIITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNGAILISASVQTQEL 189
Query: 279 CQL 281
C +
Sbjct: 190 CDV 192