Miyakogusa Predicted Gene

Lj1g3v1500510.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1500510.1 Non Chatacterized Hit- tr|I3T886|I3T886_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,68.06,0.000000000000004,seg,NULL,CUFF.27411.1
         (148 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G63480.1 | Symbols:  | unknown protein; Has 30201 Blast hits ...    61   2e-10

>AT5G63480.1 | Symbols:  | unknown protein; Has 30201 Blast hits
          to 17322 proteins in 780 species: Archae - 12; Bacteria
          - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
          Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
          BLink). | chr5:25417317-25418473 FORWARD LENGTH=189
          Length = 189

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/35 (71%), Positives = 32/35 (91%)

Query: 17 QELSMEGQRFLEETIQHAYQILSSMNDELCNPVLW 51
          QEL+MEG++ LEETI+ A+QI+S+MNDELCNP LW
Sbjct: 15 QELAMEGEKQLEETIEAAFQIISAMNDELCNPSLW 49