Miyakogusa Predicted Gene

Lj1g3v1486260.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1486260.3 Non Chatacterized Hit- tr|C4J6K4|C4J6K4_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,73.77,2e-18,DEK
C-terminal domain,NULL; DEK_C,DEK, C-terminal; SUBFAMILY NOT
NAMED,NULL; DEK PROTEIN,NULL; seg,N,CUFF.27410.3
         (477 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G48710.1 | Symbols:  | DEK domain-containing chromatin associ...   299   3e-81
AT5G63550.2 | Symbols:  | DEK domain-containing chromatin associ...   267   1e-71
AT5G63550.1 | Symbols:  | DEK domain-containing chromatin associ...   266   2e-71
AT5G55660.1 | Symbols:  | DEK domain-containing chromatin associ...   156   3e-38
AT4G26630.2 | Symbols:  | DEK domain-containing chromatin associ...   135   9e-32
AT4G26630.1 | Symbols:  | DEK domain-containing chromatin associ...   135   9e-32

>AT3G48710.1 | Symbols:  | DEK domain-containing chromatin
           associated protein | chr3:18041024-18043995 FORWARD
           LENGTH=462
          Length = 462

 Score =  299 bits (766), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 194/430 (45%), Positives = 239/430 (55%), Gaps = 50/430 (11%)

Query: 34  KDPATPASERPTRERKTVERYXXXXXXXXXXXXXXXXLVIEKGRGEQLKDIPNVAFKLSK 93
           K P TP SERP RERK   RY                L I +GRG +LK+IPNVA+KLSK
Sbjct: 51  KSPVTPVSERPIRERKRTGRYVIDTPPRSSGNKP---LSITQGRGTRLKEIPNVAYKLSK 107

Query: 94  RKPDDNLHALHSILFGKRTKAYNLKRNIGQFSGFVWTEN-EEKQRAKVKERIDKYVKEKL 152
           RKPDDNL  LH+IL+GK+ KA  LK+NIGQFSGFVW+E  EEKQRAK KE++DK +KEKL
Sbjct: 108 RKPDDNLFLLHTILYGKKAKAQMLKKNIGQFSGFVWSEQEEEKQRAKAKEKLDKCIKEKL 167

Query: 153 VDFCDVLNIPVSKGNIKKEELSVKLLEFLENPQATTDVLLADNEXXXXXXXXXXXPSKSP 212
           +DFCDVL+IPV+K  +KKEEL+V++LEFL  P+AT D+LLAD+E            + + 
Sbjct: 168 IDFCDVLDIPVNKSTVKKEELAVRVLEFLVCPKATRDILLADSEKETKKRKKSTSKNVTS 227

Query: 213 GEASTETPAXXXXXXXXXXXXXXXXXDVEEDEKAELSDAKDESQENVAAPHXXXXXXXXX 272
           GE+S   PA                 + E D  +E ++  D + E+  AP          
Sbjct: 228 GESS-HVPAKRRRQAKKQEQPTETEGNGESDVGSEGTN--DSNGEDDVAPE--------- 275

Query: 273 XXXXXXXXXXXXXXXXXXXXEGSGSKAGERTKSAKKTPVKSSKNVDKTPKKSTPKQTAAE 332
                               E    KA E+TKS  K      K + K  KK  P   AAE
Sbjct: 276 ---------EENNKSEDTETEDEKDKAKEKTKSTDK------KRLSKRTKKEKP---AAE 317

Query: 333 HD-----SASAS------LSKSKQPASKKRKTENEKPDTKGKASSKKQTDKSSKALVKDQ 381
            +     SA +S      + KS   +SKK+K +    D   K   K QT K      KDQ
Sbjct: 318 EEKSIKGSAKSSRKSFRQVDKSTTSSSKKQKVDK---DDSSKEKGKTQTSKPQAKGSKDQ 374

Query: 382 XXXXXXXXXXXVPSREAMHAVVVDILKEVDFNTATLSDILRQLGTHFGVDLMHRKAEVKD 441
                       P+R+ +H VV  ILKEVDFNTATLSDILR+LG+HFG+DLMHRKAEVKD
Sbjct: 375 GQSRKKGKKE--PTRKELHVVVTKILKEVDFNTATLSDILRKLGSHFGIDLMHRKAEVKD 432

Query: 442 IITDVINNMS 451
           IITD IN MS
Sbjct: 433 IITDAINEMS 442


>AT5G63550.2 | Symbols:  | DEK domain-containing chromatin
           associated protein | chr5:25444805-25447934 FORWARD
           LENGTH=531
          Length = 531

 Score =  267 bits (682), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 186/433 (42%), Positives = 230/433 (53%), Gaps = 59/433 (13%)

Query: 37  ATPASERPTRERKTVERYXXXXXXXXXXXXXXXXLVIEKGRGEQLKDIPNVAFKLSKRKP 96
            TP SERPTRERK VER+                + IEKGRG  L++IPNVA KLSKRK 
Sbjct: 94  VTPTSERPTRERKKVERFSLSTPMRAPPSKS---VSIEKGRGTPLREIPNVAHKLSKRKA 150

Query: 97  DDNLHALHSILFGKRTKAYNLKRNIGQFSGFVWTE-NEEKQRAKVKERIDKYVKEKLVDF 155
           DDNL  LH+ILFGK+ KA  +KRNIGQFSGF W+E  EEKQRA++KE+IDK VKEKL+ F
Sbjct: 151 DDNLMLLHTILFGKKAKAQMVKRNIGQFSGFAWSEKEEEKQRARIKEKIDKCVKEKLIVF 210

Query: 156 CDVLNIPVSKGNIKKEELSVKLLEFLENPQATTDVLLADNEXXXXXXXXXXXPSKSPGEA 215
           CDVL+IP+S+ N+KKEEL+VK+LEFLE+P+ T DV++AD E             KS GE 
Sbjct: 211 CDVLDIPISRSNVKKEELAVKVLEFLESPKETRDVIIADQEKQAKKRKSTPKRGKS-GE- 268

Query: 216 STETPAXXXXXXXXXXXXXXXXXDVEEDEKAELSDAKDESQENVAAPHXXXXXXXXXXXX 275
           S++TPA                 D EE +     D  D   E    PH            
Sbjct: 269 SSDTPA----KRKRQTKKRDLPSDTEEGK-----DEGDADSEGTNDPHEEDDAAPEEESD 319

Query: 276 XXXXXXXXXXXX-------------XXXXXEGSGSKAGERTKSAK---KTPVKSSKNVDK 319
                                         E SGSK  ++  SAK   ++  KSSK + K
Sbjct: 320 HEKTDTDDEKDEVEVEKPSKKKSSSKKTVEESSGSKGKDKQPSAKGSARSGEKSSKQIAK 379

Query: 320 TPKKSTP-KQTAAEHDSASASLSKSKQPASKKRKTENEKPDTKGKASSKKQTDKSSKALV 378
           +   S+P K+   +H  +S   SK KQP+         KP  KG     K T K      
Sbjct: 380 S--TSSPAKKQKVDHVESSKEKSK-KQPS---------KPQAKGSKEKGKATKKGKAK-- 425

Query: 379 KDQXXXXXXXXXXXVPSREAMHAVVVDILKEVDFNTATLSDILRQLGTHFGVDLMHRKAE 438
                          P+R+ M  VV  ILKEVDFNTATLSDIL++L  HFGV+L HRK E
Sbjct: 426 -------------AEPTRKEMLEVVSKILKEVDFNTATLSDILQKLSDHFGVELSHRKPE 472

Query: 439 VKDIITDVINNMS 451
           VKD+IT+ IN M+
Sbjct: 473 VKDVITEAINAMT 485


>AT5G63550.1 | Symbols:  | DEK domain-containing chromatin
           associated protein | chr5:25444805-25447934 FORWARD
           LENGTH=530
          Length = 530

 Score =  266 bits (681), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 183/433 (42%), Positives = 228/433 (52%), Gaps = 60/433 (13%)

Query: 37  ATPASERPTRERKTVERYXXXXXXXXXXXXXXXXLVIEKGRGEQLKDIPNVAFKLSKRKP 96
            TP SERPTRERK VER+                + IEKGRG  L++IPNVA KLSKRK 
Sbjct: 94  VTPTSERPTRERKKVERFSLSTPMRAPPSKS---VSIEKGRGTPLREIPNVAHKLSKRKA 150

Query: 97  DDNLHALHSILFGKRTKAYNLKRNIGQFSGFVWTE-NEEKQRAKVKERIDKYVKEKLVDF 155
           DDNL  LH+ILFGK+ KA  +KRNIGQFSGF W+E  EEKQRA++KE+IDK VKEKL+ F
Sbjct: 151 DDNLMLLHTILFGKKAKAQMVKRNIGQFSGFAWSEKEEEKQRARIKEKIDKCVKEKLIVF 210

Query: 156 CDVLNIPVSKGNIKKEELSVKLLEFLENPQATTDVLLADNEXXXXXXXXXXXPSKSPGEA 215
           CDVL+IP+S+ N+KKEEL+VK+LEFLE+P+ T DV++AD E           P +     
Sbjct: 211 CDVLDIPISRSNVKKEELAVKVLEFLESPKETRDVIIADQE---KAKKRKSTPKRGKSGE 267

Query: 216 STETPAXXXXXXXXXXXXXXXXXDVEEDEKAELSDAKDESQENVAAPHXXXXXXXXXXXX 275
           S++TPA                 D EE +     D  D   E    PH            
Sbjct: 268 SSDTPA----KRKRQTKKRDLPSDTEEGK-----DEGDADSEGTNDPHEEDDAAPEEESD 318

Query: 276 XXXXXXXXXXXX-------------XXXXXEGSGSKAGERTKSAK---KTPVKSSKNVDK 319
                                         E SGSK  ++  SAK   ++  KSSK + K
Sbjct: 319 HEKTDTDDEKDEVEVEKPSKKKSSSKKTVEESSGSKGKDKQPSAKGSARSGEKSSKQIAK 378

Query: 320 TPKKSTP-KQTAAEHDSASASLSKSKQPASKKRKTENEKPDTKGKASSKKQTDKSSKALV 378
           +   S+P K+   +H  +S   SK KQP+         KP  KG     K T K      
Sbjct: 379 S--TSSPAKKQKVDHVESSKEKSK-KQPS---------KPQAKGSKEKGKATKKGKAK-- 424

Query: 379 KDQXXXXXXXXXXXVPSREAMHAVVVDILKEVDFNTATLSDILRQLGTHFGVDLMHRKAE 438
                          P+R+ M  VV  ILKEVDFNTATLSDIL++L  HFGV+L HRK E
Sbjct: 425 -------------AEPTRKEMLEVVSKILKEVDFNTATLSDILQKLSDHFGVELSHRKPE 471

Query: 439 VKDIITDVINNMS 451
           VKD+IT+ IN M+
Sbjct: 472 VKDVITEAINAMT 484


>AT5G55660.1 | Symbols:  | DEK domain-containing chromatin
           associated protein | chr5:22539375-22543142 FORWARD
           LENGTH=778
          Length = 778

 Score =  156 bits (394), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 85/169 (50%), Positives = 112/169 (66%), Gaps = 9/169 (5%)

Query: 32  EKKD--PATPA-SERPTRERKTVERYXXXXXXXXXXXXXXXXLVIEKGRGEQLKDIPNVA 88
           EKKD  P TP  S+RP RERK+VER                   +EKG+G  LKDIPNVA
Sbjct: 317 EKKDIEPKTPFFSDRPVRERKSVERLVAVVDKDSSRE-----FHVEKGKGTPLKDIPNVA 371

Query: 89  FKLSKRKPDDNLHALHSILFG-KRTKAYNLKRNIGQFSGFVWTENEEKQRAKVKERIDKY 147
           +K+S++K D+    LH+ILFG KR KA  LK +I +FSG+ W  +EEK + KVKE+ +K 
Sbjct: 372 YKVSRKKSDEVFKQLHTILFGGKRVKATQLKAHILRFSGYKWQGDEEKAKLKVKEKFEKI 431

Query: 148 VKEKLVDFCDVLNIPVSKGNIKKEELSVKLLEFLENPQATTDVLLADNE 196
            KEKL++FCD+ +I V+K   KKE++  KL+EFLE P ATTDVL+ + E
Sbjct: 432 NKEKLLEFCDLFDISVAKATTKKEDIVTKLVEFLEKPHATTDVLVNEKE 480


>AT4G26630.2 | Symbols:  | DEK domain-containing chromatin
           associated protein | chr4:13430873-13434877 REVERSE
           LENGTH=763
          Length = 763

 Score =  135 bits (339), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 78/157 (49%), Positives = 101/157 (64%), Gaps = 6/157 (3%)

Query: 35  DPATPASERPTRERKTVERYXXXXXXXXXXXXXXXXLVIEKGRGEQLKDIPNVAFKLSKR 94
           +P TP S+RP RERK+VER                   +EKGRG  LKDIPNVA K+ ++
Sbjct: 310 EPRTPFSDRPVRERKSVERLVALIDKDSSKE-----FRVEKGRGAYLKDIPNVANKVMRK 364

Query: 95  KPDDNLHALHSILFG-KRTKAYNLKRNIGQFSGFVWTENEEKQRAKVKERIDKYVKEKLV 153
           + D+ L  LH ILFG +R KA  +K NI  FSGFVW  +E+K + KVKE+++K  KEKL 
Sbjct: 365 RSDETLKLLHPILFGGRRGKAAQIKTNILGFSGFVWHGDEKKAKEKVKEKLEKCTKEKLW 424

Query: 154 DFCDVLNIPVSKGNIKKEELSVKLLEFLENPQATTDV 190
           +FCDVL+I ++K   KKE++  KL EFLE P  T DV
Sbjct: 425 EFCDVLDIHITKATTKKEDIITKLFEFLEKPHVTGDV 461


>AT4G26630.1 | Symbols:  | DEK domain-containing chromatin
           associated protein | chr4:13430873-13434877 REVERSE
           LENGTH=763
          Length = 763

 Score =  135 bits (339), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 78/157 (49%), Positives = 101/157 (64%), Gaps = 6/157 (3%)

Query: 35  DPATPASERPTRERKTVERYXXXXXXXXXXXXXXXXLVIEKGRGEQLKDIPNVAFKLSKR 94
           +P TP S+RP RERK+VER                   +EKGRG  LKDIPNVA K+ ++
Sbjct: 310 EPRTPFSDRPVRERKSVERLVALIDKDSSKE-----FRVEKGRGAYLKDIPNVANKVMRK 364

Query: 95  KPDDNLHALHSILFG-KRTKAYNLKRNIGQFSGFVWTENEEKQRAKVKERIDKYVKEKLV 153
           + D+ L  LH ILFG +R KA  +K NI  FSGFVW  +E+K + KVKE+++K  KEKL 
Sbjct: 365 RSDETLKLLHPILFGGRRGKAAQIKTNILGFSGFVWHGDEKKAKEKVKEKLEKCTKEKLW 424

Query: 154 DFCDVLNIPVSKGNIKKEELSVKLLEFLENPQATTDV 190
           +FCDVL+I ++K   KKE++  KL EFLE P  T DV
Sbjct: 425 EFCDVLDIHITKATTKKEDIITKLFEFLEKPHVTGDV 461