Miyakogusa Predicted Gene

Lj1g3v1486260.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1486260.1 Non Chatacterized Hit- tr|C4J6K4|C4J6K4_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,73.77,2e-18,DEK
C-terminal domain,NULL; DEK_C,DEK, C-terminal; SUBFAMILY NOT
NAMED,NULL; DEK PROTEIN,NULL; seg,N,CUFF.27410.1
         (569 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G48710.1 | Symbols:  | DEK domain-containing chromatin associ...   303   3e-82
AT5G63550.2 | Symbols:  | DEK domain-containing chromatin associ...   280   1e-75
AT5G63550.1 | Symbols:  | DEK domain-containing chromatin associ...   280   2e-75
AT5G55660.1 | Symbols:  | DEK domain-containing chromatin associ...   158   1e-38
AT4G26630.2 | Symbols:  | DEK domain-containing chromatin associ...   137   2e-32
AT4G26630.1 | Symbols:  | DEK domain-containing chromatin associ...   137   2e-32

>AT3G48710.1 | Symbols:  | DEK domain-containing chromatin
           associated protein | chr3:18041024-18043995 FORWARD
           LENGTH=462
          Length = 462

 Score =  303 bits (775), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 195/431 (45%), Positives = 248/431 (57%), Gaps = 53/431 (12%)

Query: 127 KDPATPASERPTRERKTVERYXXXXXXXXXXXXXXXXLVIEKGRGEQLKDIPNVAFKLSK 186
           K P TP SERP RERK   RY                L I +GRG +LK+IPNVA+KLSK
Sbjct: 51  KSPVTPVSERPIRERKRTGRYVIDTPPRSSGNKP---LSITQGRGTRLKEIPNVAYKLSK 107

Query: 187 RKPDDNLHALHSILFGKRTKAYNLKRNIGQFSGFVWTENEE-KQRAKVKERIDKYVKEKL 245
           RKPDDNL  LH+IL+GK+ KA  LK+NIGQFSGFVW+E EE KQRAK KE++DK +KEKL
Sbjct: 108 RKPDDNLFLLHTILYGKKAKAQMLKKNIGQFSGFVWSEQEEEKQRAKAKEKLDKCIKEKL 167

Query: 246 VDFCDVLNIPVSKGNIKKEELSVKLLEFLENPQATTDVLLADNEXXXXXXXXXXXPSKSP 305
           +DFCDVL+IPV+K  +KKEEL+V++LEFL  P+AT D+LLAD+E            + + 
Sbjct: 168 IDFCDVLDIPVNKSTVKKEELAVRVLEFLVCPKATRDILLADSEKETKKRKKSTSKNVTS 227

Query: 306 GEASTETPAKQKKTSESGKKRKGSSDVEEDEKAELSD--AKDESQENVAAPHXXXXXXXX 363
           GE+S   PAK+++     KK++  ++ E + ++++      D + E+  AP         
Sbjct: 228 GESS-HVPAKRRR---QAKKQEQPTETEGNGESDVGSEGTNDSNGEDDVAPE-------- 275

Query: 364 XXXXXXXXXXXXXXXXXXXXXEGSGSKAGERTKSAKKTPVKSSKNVDKTPKKSTPKQTAA 423
                                E    KA E+TKS  K      K + K  KK  P   AA
Sbjct: 276 ----------EENNKSEDTETEDEKDKAKEKTKSTDK------KRLSKRTKKEKP---AA 316

Query: 424 EHD-----SASAS------LSKSKQPASKKRKTENEKPDTKGKASSKKQTDKSSKALVKD 472
           E +     SA +S      + KS   +SKK+K +    D   K   K QT K      KD
Sbjct: 317 EEEKSIKGSAKSSRKSFRQVDKSTTSSSKKQKVDK---DDSSKEKGKTQTSKPQAKGSKD 373

Query: 473 QXXXXXXXXXXXVPSREAMHAVVVDILKEVDFNTATLSDILRQLGTHFGVDLMHRKAEVK 532
           Q            P+R+ +H VV  ILKEVDFNTATLSDILR+LG+HFG+DLMHRKAEVK
Sbjct: 374 QGQSRKKGKKE--PTRKELHVVVTKILKEVDFNTATLSDILRKLGSHFGIDLMHRKAEVK 431

Query: 533 DIITDVINNMS 543
           DIITD IN MS
Sbjct: 432 DIITDAINEMS 442


>AT5G63550.2 | Symbols:  | DEK domain-containing chromatin
           associated protein | chr5:25444805-25447934 FORWARD
           LENGTH=531
          Length = 531

 Score =  280 bits (717), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 192/432 (44%), Positives = 239/432 (55%), Gaps = 58/432 (13%)

Query: 130 ATPASERPTRERKTVERYXXXXXXXXXXXXXXXXLVIEKGRGEQLKDIPNVAFKLSKRKP 189
            TP SERPTRERK VER+                + IEKGRG  L++IPNVA KLSKRK 
Sbjct: 94  VTPTSERPTRERKKVERFSLSTPMRAPPSKS---VSIEKGRGTPLREIPNVAHKLSKRKA 150

Query: 190 DDNLHALHSILFGKRTKAYNLKRNIGQFSGFVWTE-NEEKQRAKVKERIDKYVKEKLVDF 248
           DDNL  LH+ILFGK+ KA  +KRNIGQFSGF W+E  EEKQRA++KE+IDK VKEKL+ F
Sbjct: 151 DDNLMLLHTILFGKKAKAQMVKRNIGQFSGFAWSEKEEEKQRARIKEKIDKCVKEKLIVF 210

Query: 249 CDVLNIPVSKGNIKKEELSVKLLEFLENPQATTDVLLADNEXXXXXXXXXXXPSKSPGEA 308
           CDVL+IP+S+ N+KKEEL+VK+LEFLE+P+ T DV++AD E             KS GE+
Sbjct: 211 CDVLDIPISRSNVKKEELAVKVLEFLESPKETRDVIIADQEKQAKKRKSTPKRGKS-GES 269

Query: 309 STETPAKQKKTSESGKKRKGSSDVEEDEKAELSDAKDESQENVAAPHXXXXXXXXXXXXX 368
           S +TPAK+K+ +   KKR   SD EE +     D  D   E    PH             
Sbjct: 270 S-DTPAKRKRQT---KKRDLPSDTEEGK-----DEGDADSEGTNDPHEEDDAAPEEESDH 320

Query: 369 XXXXXXXXX-------------XXXXXXXEGSGSKAGERTKSAK---KTPVKSSKNVDKT 412
                                        E SGSK  ++  SAK   ++  KSSK + K+
Sbjct: 321 EKTDTDDEKDEVEVEKPSKKKSSSKKTVEESSGSKGKDKQPSAKGSARSGEKSSKQIAKS 380

Query: 413 PKKSTP-KQTAAEHDSASASLSKSKQPASKKRKTENEKPDTKGKASSKKQTDKSSKALVK 471
              S+P K+   +H  +S   SK KQP+         KP  KG     K T K       
Sbjct: 381 --TSSPAKKQKVDHVESSKEKSK-KQPS---------KPQAKGSKEKGKATKKGKAK--- 425

Query: 472 DQXXXXXXXXXXXVPSREAMHAVVVDILKEVDFNTATLSDILRQLGTHFGVDLMHRKAEV 531
                         P+R+ M  VV  ILKEVDFNTATLSDIL++L  HFGV+L HRK EV
Sbjct: 426 ------------AEPTRKEMLEVVSKILKEVDFNTATLSDILQKLSDHFGVELSHRKPEV 473

Query: 532 KDIITDVINNMS 543
           KD+IT+ IN M+
Sbjct: 474 KDVITEAINAMT 485


>AT5G63550.1 | Symbols:  | DEK domain-containing chromatin
           associated protein | chr5:25444805-25447934 FORWARD
           LENGTH=530
          Length = 530

 Score =  280 bits (715), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 189/432 (43%), Positives = 237/432 (54%), Gaps = 59/432 (13%)

Query: 130 ATPASERPTRERKTVERYXXXXXXXXXXXXXXXXLVIEKGRGEQLKDIPNVAFKLSKRKP 189
            TP SERPTRERK VER+                + IEKGRG  L++IPNVA KLSKRK 
Sbjct: 94  VTPTSERPTRERKKVERFSLSTPMRAPPSKS---VSIEKGRGTPLREIPNVAHKLSKRKA 150

Query: 190 DDNLHALHSILFGKRTKAYNLKRNIGQFSGFVWTE-NEEKQRAKVKERIDKYVKEKLVDF 248
           DDNL  LH+ILFGK+ KA  +KRNIGQFSGF W+E  EEKQRA++KE+IDK VKEKL+ F
Sbjct: 151 DDNLMLLHTILFGKKAKAQMVKRNIGQFSGFAWSEKEEEKQRARIKEKIDKCVKEKLIVF 210

Query: 249 CDVLNIPVSKGNIKKEELSVKLLEFLENPQATTDVLLADNEXXXXXXXXXXXPSKSPGEA 308
           CDVL+IP+S+ N+KKEEL+VK+LEFLE+P+ T DV++AD E           P +     
Sbjct: 211 CDVLDIPISRSNVKKEELAVKVLEFLESPKETRDVIIADQE---KAKKRKSTPKRGKSGE 267

Query: 309 STETPAKQKKTSESGKKRKGSSDVEEDEKAELSDAKDESQENVAAPHXXXXXXXXXXXXX 368
           S++TPAK+K+ +   KKR   SD EE +     D  D   E    PH             
Sbjct: 268 SSDTPAKRKRQT---KKRDLPSDTEEGK-----DEGDADSEGTNDPHEEDDAAPEEESDH 319

Query: 369 XXXXXXXXX-------------XXXXXXXEGSGSKAGERTKSAK---KTPVKSSKNVDKT 412
                                        E SGSK  ++  SAK   ++  KSSK + K+
Sbjct: 320 EKTDTDDEKDEVEVEKPSKKKSSSKKTVEESSGSKGKDKQPSAKGSARSGEKSSKQIAKS 379

Query: 413 PKKSTP-KQTAAEHDSASASLSKSKQPASKKRKTENEKPDTKGKASSKKQTDKSSKALVK 471
              S+P K+   +H  +S   SK KQP+         KP  KG     K T K       
Sbjct: 380 --TSSPAKKQKVDHVESSKEKSK-KQPS---------KPQAKGSKEKGKATKKGKAK--- 424

Query: 472 DQXXXXXXXXXXXVPSREAMHAVVVDILKEVDFNTATLSDILRQLGTHFGVDLMHRKAEV 531
                         P+R+ M  VV  ILKEVDFNTATLSDIL++L  HFGV+L HRK EV
Sbjct: 425 ------------AEPTRKEMLEVVSKILKEVDFNTATLSDILQKLSDHFGVELSHRKPEV 472

Query: 532 KDIITDVINNMS 543
           KD+IT+ IN M+
Sbjct: 473 KDVITEAINAMT 484


>AT5G55660.1 | Symbols:  | DEK domain-containing chromatin
           associated protein | chr5:22539375-22543142 FORWARD
           LENGTH=778
          Length = 778

 Score =  158 bits (399), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 85/169 (50%), Positives = 112/169 (66%), Gaps = 9/169 (5%)

Query: 125 EKKD--PATPA-SERPTRERKTVERYXXXXXXXXXXXXXXXXLVIEKGRGEQLKDIPNVA 181
           EKKD  P TP  S+RP RERK+VER                   +EKG+G  LKDIPNVA
Sbjct: 317 EKKDIEPKTPFFSDRPVRERKSVERLVAVVDKDSSRE-----FHVEKGKGTPLKDIPNVA 371

Query: 182 FKLSKRKPDDNLHALHSILFG-KRTKAYNLKRNIGQFSGFVWTENEEKQRAKVKERIDKY 240
           +K+S++K D+    LH+ILFG KR KA  LK +I +FSG+ W  +EEK + KVKE+ +K 
Sbjct: 372 YKVSRKKSDEVFKQLHTILFGGKRVKATQLKAHILRFSGYKWQGDEEKAKLKVKEKFEKI 431

Query: 241 VKEKLVDFCDVLNIPVSKGNIKKEELSVKLLEFLENPQATTDVLLADNE 289
            KEKL++FCD+ +I V+K   KKE++  KL+EFLE P ATTDVL+ + E
Sbjct: 432 NKEKLLEFCDLFDISVAKATTKKEDIVTKLVEFLEKPHATTDVLVNEKE 480


>AT4G26630.2 | Symbols:  | DEK domain-containing chromatin
           associated protein | chr4:13430873-13434877 REVERSE
           LENGTH=763
          Length = 763

 Score =  137 bits (345), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/157 (49%), Positives = 101/157 (64%), Gaps = 6/157 (3%)

Query: 128 DPATPASERPTRERKTVERYXXXXXXXXXXXXXXXXLVIEKGRGEQLKDIPNVAFKLSKR 187
           +P TP S+RP RERK+VER                   +EKGRG  LKDIPNVA K+ ++
Sbjct: 310 EPRTPFSDRPVRERKSVERLVALIDKDSSKE-----FRVEKGRGAYLKDIPNVANKVMRK 364

Query: 188 KPDDNLHALHSILFG-KRTKAYNLKRNIGQFSGFVWTENEEKQRAKVKERIDKYVKEKLV 246
           + D+ L  LH ILFG +R KA  +K NI  FSGFVW  +E+K + KVKE+++K  KEKL 
Sbjct: 365 RSDETLKLLHPILFGGRRGKAAQIKTNILGFSGFVWHGDEKKAKEKVKEKLEKCTKEKLW 424

Query: 247 DFCDVLNIPVSKGNIKKEELSVKLLEFLENPQATTDV 283
           +FCDVL+I ++K   KKE++  KL EFLE P  T DV
Sbjct: 425 EFCDVLDIHITKATTKKEDIITKLFEFLEKPHVTGDV 461


>AT4G26630.1 | Symbols:  | DEK domain-containing chromatin
           associated protein | chr4:13430873-13434877 REVERSE
           LENGTH=763
          Length = 763

 Score =  137 bits (345), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/157 (49%), Positives = 101/157 (64%), Gaps = 6/157 (3%)

Query: 128 DPATPASERPTRERKTVERYXXXXXXXXXXXXXXXXLVIEKGRGEQLKDIPNVAFKLSKR 187
           +P TP S+RP RERK+VER                   +EKGRG  LKDIPNVA K+ ++
Sbjct: 310 EPRTPFSDRPVRERKSVERLVALIDKDSSKE-----FRVEKGRGAYLKDIPNVANKVMRK 364

Query: 188 KPDDNLHALHSILFG-KRTKAYNLKRNIGQFSGFVWTENEEKQRAKVKERIDKYVKEKLV 246
           + D+ L  LH ILFG +R KA  +K NI  FSGFVW  +E+K + KVKE+++K  KEKL 
Sbjct: 365 RSDETLKLLHPILFGGRRGKAAQIKTNILGFSGFVWHGDEKKAKEKVKEKLEKCTKEKLW 424

Query: 247 DFCDVLNIPVSKGNIKKEELSVKLLEFLENPQATTDV 283
           +FCDVL+I ++K   KKE++  KL EFLE P  T DV
Sbjct: 425 EFCDVLDIHITKATTKKEDIITKLFEFLEKPHVTGDV 461