Miyakogusa Predicted Gene

Lj1g3v1478280.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1478280.2 tr|Q747V3|Q747V3_GEOSL L-allo-threonine aldolase,
stereospecific OS=Geobacter sulfurreducens
(strain,46.28,2e-18,THREONINE ALDOLASE,NULL; PLP-dependent
transferases,Pyridoxal phosphate-dependent transferase,
major,CUFF.27359.2
         (140 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08630.4 | Symbols: THA1 | threonine aldolase 1 | chr1:274394...   124   2e-29
AT1G08630.2 | Symbols: THA1 | threonine aldolase 1 | chr1:274394...   124   2e-29
AT1G08630.3 | Symbols: THA1 | threonine aldolase 1 | chr1:274394...   124   2e-29
AT1G08630.1 | Symbols: THA1 | threonine aldolase 1 | chr1:274394...   124   2e-29
AT3G04520.1 | Symbols: THA2 | threonine aldolase 2 | chr3:121739...   124   3e-29
AT3G04520.2 | Symbols: THA2 | threonine aldolase 2 | chr3:121739...   118   1e-27
AT1G08630.5 | Symbols: THA1 | threonine aldolase 1 | chr1:274394...   104   2e-23

>AT1G08630.4 | Symbols: THA1 | threonine aldolase 1 |
           chr1:2743948-2745685 REVERSE LENGTH=358
          Length = 358

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/134 (52%), Positives = 92/134 (68%), Gaps = 25/134 (18%)

Query: 11  ALGVPVDRLVQAADSVL------------------------ARRLRKTLGGGMRQIGILC 46
           ALGVPV +LV+AADSV                         A+ +RKTLGGGMRQIG+LC
Sbjct: 186 ALGVPVHKLVKAADSVQVCLSKGLGAPVGSVIVGSQSFIEKAKTVRKTLGGGMRQIGVLC 245

Query: 47  AAALVGLHENVGKLKSDHKNARTLADGLSEILGLKVDASSVESNMIFIGIED-SWTTAEK 105
           AAALV L EN+ KL+ DHK A+ LA+GL+++ G++V+ ++VE+NMIF+ +ED S  TAEK
Sbjct: 246 AAALVALQENLPKLQHDHKKAKLLAEGLNQMKGIRVNVAAVETNMIFMDMEDGSRLTAEK 305

Query: 106 ICKYLEERGILLIK 119
           + K LEE GILLI+
Sbjct: 306 LRKNLEENGILLIR 319


>AT1G08630.2 | Symbols: THA1 | threonine aldolase 1 |
           chr1:2743948-2745685 REVERSE LENGTH=358
          Length = 358

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/134 (52%), Positives = 92/134 (68%), Gaps = 25/134 (18%)

Query: 11  ALGVPVDRLVQAADSVL------------------------ARRLRKTLGGGMRQIGILC 46
           ALGVPV +LV+AADSV                         A+ +RKTLGGGMRQIG+LC
Sbjct: 186 ALGVPVHKLVKAADSVQVCLSKGLGAPVGSVIVGSQSFIEKAKTVRKTLGGGMRQIGVLC 245

Query: 47  AAALVGLHENVGKLKSDHKNARTLADGLSEILGLKVDASSVESNMIFIGIED-SWTTAEK 105
           AAALV L EN+ KL+ DHK A+ LA+GL+++ G++V+ ++VE+NMIF+ +ED S  TAEK
Sbjct: 246 AAALVALQENLPKLQHDHKKAKLLAEGLNQMKGIRVNVAAVETNMIFMDMEDGSRLTAEK 305

Query: 106 ICKYLEERGILLIK 119
           + K LEE GILLI+
Sbjct: 306 LRKNLEENGILLIR 319


>AT1G08630.3 | Symbols: THA1 | threonine aldolase 1 |
           chr1:2743948-2745685 REVERSE LENGTH=358
          Length = 358

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/134 (52%), Positives = 92/134 (68%), Gaps = 25/134 (18%)

Query: 11  ALGVPVDRLVQAADSVL------------------------ARRLRKTLGGGMRQIGILC 46
           ALGVPV +LV+AADSV                         A+ +RKTLGGGMRQIG+LC
Sbjct: 186 ALGVPVHKLVKAADSVQVCLSKGLGAPVGSVIVGSQSFIEKAKTVRKTLGGGMRQIGVLC 245

Query: 47  AAALVGLHENVGKLKSDHKNARTLADGLSEILGLKVDASSVESNMIFIGIED-SWTTAEK 105
           AAALV L EN+ KL+ DHK A+ LA+GL+++ G++V+ ++VE+NMIF+ +ED S  TAEK
Sbjct: 246 AAALVALQENLPKLQHDHKKAKLLAEGLNQMKGIRVNVAAVETNMIFMDMEDGSRLTAEK 305

Query: 106 ICKYLEERGILLIK 119
           + K LEE GILLI+
Sbjct: 306 LRKNLEENGILLIR 319


>AT1G08630.1 | Symbols: THA1 | threonine aldolase 1 |
           chr1:2743948-2745685 REVERSE LENGTH=358
          Length = 358

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 70/134 (52%), Positives = 92/134 (68%), Gaps = 25/134 (18%)

Query: 11  ALGVPVDRLVQAADSVL------------------------ARRLRKTLGGGMRQIGILC 46
           ALGVPV +LV+AADSV                         A+ +RKTLGGGMRQIG+LC
Sbjct: 186 ALGVPVHKLVKAADSVQVCLSKGLGAPVGSVIVGSQSFIEKAKTVRKTLGGGMRQIGVLC 245

Query: 47  AAALVGLHENVGKLKSDHKNARTLADGLSEILGLKVDASSVESNMIFIGIED-SWTTAEK 105
           AAALV L EN+ KL+ DHK A+ LA+GL+++ G++V+ ++VE+NMIF+ +ED S  TAEK
Sbjct: 246 AAALVALQENLPKLQHDHKKAKLLAEGLNQMKGIRVNVAAVETNMIFMDMEDGSRLTAEK 305

Query: 106 ICKYLEERGILLIK 119
           + K LEE GILLI+
Sbjct: 306 LRKNLEENGILLIR 319


>AT3G04520.1 | Symbols: THA2 | threonine aldolase 2 |
           chr3:1217397-1219571 REVERSE LENGTH=355
          Length = 355

 Score =  124 bits (310), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 71/133 (53%), Positives = 88/133 (66%), Gaps = 25/133 (18%)

Query: 11  ALGVPVDRLVQAADSVL------------------------ARRLRKTLGGGMRQIGILC 46
           ALGVPV R+VQAADSV                         AR LRKTLGGGMRQIG+LC
Sbjct: 190 ALGVPVKRIVQAADSVSICLSKGIGAPVGSVIVGSKKFITKARWLRKTLGGGMRQIGVLC 249

Query: 47  AAALVGLHENVGKLKSDHKNARTLADGLSEILGLKVDASSVESNMIFIGI-EDSWTTAEK 105
           AAALV LHENV KL+ DHK AR LA+GL+ I  L+V+ ++VE+N+I++ I ED    AE+
Sbjct: 250 AAALVALHENVAKLEDDHKKARVLAEGLNRIERLRVNVAAVETNIIYVDIPEDPKFGAEE 309

Query: 106 ICKYLEERGILLI 118
            CK LE+ G+L+I
Sbjct: 310 ACKSLEDVGVLVI 322


>AT3G04520.2 | Symbols: THA2 | threonine aldolase 2 |
           chr3:1217397-1219571 REVERSE LENGTH=354
          Length = 354

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/133 (53%), Positives = 87/133 (65%), Gaps = 26/133 (19%)

Query: 11  ALGVPVDRLVQAADSVL------------------------ARRLRKTLGGGMRQIGILC 46
           ALGVPV R+VQAADSV                         AR LRKTLGGGMRQIG+LC
Sbjct: 190 ALGVPVKRIVQAADSVSICLSKGIGAPVGSVIVGSKKFITKARWLRKTLGGGMRQIGVLC 249

Query: 47  AAALVGLHENVGKLKSDHKNARTLADGLSEILGLKVDASSVESNMIFIGI-EDSWTTAEK 105
           AAALV LHENV KL+ DHK AR LA GL+ I  L+V+ ++VE+N+I++ I ED    AE+
Sbjct: 250 AAALVALHENVAKLEDDHKKARVLA-GLNRIERLRVNVAAVETNIIYVDIPEDPKFGAEE 308

Query: 106 ICKYLEERGILLI 118
            CK LE+ G+L+I
Sbjct: 309 ACKSLEDVGVLVI 321


>AT1G08630.5 | Symbols: THA1 | threonine aldolase 1 |
           chr1:2743948-2745685 REVERSE LENGTH=344
          Length = 344

 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/134 (49%), Positives = 80/134 (59%), Gaps = 39/134 (29%)

Query: 11  ALGVPVDRLVQAADSVL------------------------ARRLRKTLGGGMRQIGILC 46
           ALGVPV +LV+AADSV                         A+ +RKTLGGGMRQIG+LC
Sbjct: 186 ALGVPVHKLVKAADSVQVCLSKGLGAPVGSVIVGSQSFIEKAKTVRKTLGGGMRQIGVLC 245

Query: 47  AAALVGLHENVGKLKSDHKNARTLADGLSEILGLKVDASSVESNMIFIGIED-SWTTAEK 105
           AAALV L EN+ KL+ DHK A+ LA              +VE+NMIF+ +ED S  TAEK
Sbjct: 246 AAALVALQENLPKLQHDHKKAKLLA--------------AVETNMIFMDMEDGSRLTAEK 291

Query: 106 ICKYLEERGILLIK 119
           + K LEE GILLI+
Sbjct: 292 LRKNLEENGILLIR 305