Miyakogusa Predicted Gene
- Lj1g3v1466220.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1466220.1 Non Chatacterized Hit- tr|I3SXJ9|I3SXJ9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.45,0,UBIQUITIN_CONJUGAT_1,Ubiquitin-conjugating enzyme, active
site; UBC-like,Ubiquitin-conjugating enzym,CUFF.27356.1
(193 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G50870.1 | Symbols: UBC27 | ubiquitin-conjugating enzyme 27 |... 313 4e-86
AT5G50870.2 | Symbols: UBC27 | ubiquitin-conjugating enzyme 27 |... 305 1e-83
AT5G41700.4 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzy... 134 3e-32
AT1G64230.5 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 131 2e-31
AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 131 2e-31
AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 131 3e-31
AT1G78870.2 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enz... 131 3e-31
AT3G08690.2 | Symbols: UBC11 | ubiquitin-conjugating enzyme 11 |... 131 3e-31
AT3G08690.1 | Symbols: UBC11, ATUBC11 | ubiquitin-conjugating en... 131 3e-31
AT1G16890.2 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enz... 130 5e-31
AT4G27960.1 | Symbols: UBC9 | ubiquitin conjugating enzyme 9 | c... 130 6e-31
AT4G27960.2 | Symbols: UBC9 | ubiquitin conjugating enzyme 9 | c... 130 7e-31
AT1G16890.3 | Symbols: UBC36 | ubiquitin-conjugating enzyme 36 |... 130 7e-31
AT1G16890.1 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enz... 129 9e-31
AT5G53300.4 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |... 129 9e-31
AT5G53300.2 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |... 129 9e-31
AT5G53300.1 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |... 129 9e-31
AT5G41700.5 | Symbols: UBC8 | ubiquitin conjugating enzyme 8 | c... 129 1e-30
AT5G41700.1 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzy... 129 1e-30
AT5G41700.2 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzy... 129 1e-30
AT2G16740.1 | Symbols: UBC29 | ubiquitin-conjugating enzyme 29 |... 129 1e-30
AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 129 1e-30
AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 129 1e-30
AT5G56150.2 | Symbols: UBC30 | ubiquitin-conjugating enzyme 30 |... 128 2e-30
AT5G56150.1 | Symbols: UBC30 | ubiquitin-conjugating enzyme 30 |... 128 2e-30
AT1G78870.1 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enz... 126 7e-30
AT3G08700.1 | Symbols: UBC12 | ubiquitin-conjugating enzyme 12 |... 120 6e-28
AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 | Ubiquitin-con... 119 1e-27
AT5G25760.2 | Symbols: PEX4 | peroxin4 | chr5:8967983-8969173 FO... 111 3e-25
AT5G25760.1 | Symbols: PEX4, UBC21 | peroxin4 | chr5:8967983-896... 111 3e-25
AT3G24515.1 | Symbols: UBC37 | ubiquitin-conjugating enzyme 37 |... 108 2e-24
AT1G36340.1 | Symbols: UBC31 | ubiquitin-conjugating enzyme 31 |... 101 3e-22
AT5G05080.2 | Symbols: UBC22, ATUBC22 | ubiquitin-conjugating en... 101 4e-22
AT5G05080.1 | Symbols: UBC22, ATUBC22 | ubiquitin-conjugating en... 101 4e-22
AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 | Ubiquitin-con... 100 1e-21
AT1G14400.2 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein ... 99 1e-21
AT1G14400.1 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein ... 99 1e-21
AT2G02760.1 | Symbols: ATUBC2, UBC2 | ubiquiting-conjugating enz... 98 3e-21
AT5G62540.1 | Symbols: UBC3 | ubiquitin-conjugating enzyme 3 | c... 97 8e-21
AT5G41700.3 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzy... 96 2e-20
AT1G78870.3 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enz... 93 1e-19
AT1G63800.1 | Symbols: UBC5 | ubiquitin-conjugating enzyme 5 | c... 93 1e-19
AT5G53300.3 | Symbols: | ubiquitin-conjugating enzyme 10 | chr5... 92 2e-19
AT2G46030.1 | Symbols: UBC6 | ubiquitin-conjugating enzyme 6 | c... 91 6e-19
AT5G41340.1 | Symbols: UBC4, ATUBC4 | ubiquitin conjugating enzy... 91 6e-19
AT3G20060.1 | Symbols: UBC19 | ubiquitin-conjugating enzyme19 | ... 90 1e-18
AT3G20060.2 | Symbols: UBC19 | ubiquitin-conjugating enzyme19 | ... 87 5e-18
AT1G50490.1 | Symbols: UBC20 | ubiquitin-conjugating enzyme 20 |... 86 1e-17
AT2G32790.1 | Symbols: | Ubiquitin-conjugating enzyme family pr... 84 5e-17
AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | sum... 81 4e-16
AT5G59300.1 | Symbols: UBC7, ATUBC7 | ubiquitin carrier protein ... 80 6e-16
AT3G55380.1 | Symbols: UBC14 | ubiquitin-conjugating enzyme 14 |... 78 4e-15
AT3G46460.1 | Symbols: UBC13 | ubiquitin-conjugating enzyme 13 |... 77 7e-15
AT2G18600.1 | Symbols: | Ubiquitin-conjugating enzyme family pr... 69 2e-12
AT4G36800.2 | Symbols: RCE1 | RUB1 conjugating enzyme 1 | chr4:1... 67 7e-12
AT4G36800.1 | Symbols: RCE1 | RUB1 conjugating enzyme 1 | chr4:1... 67 7e-12
AT3G55380.2 | Symbols: UBC14 | ubiquitin-conjugating enzyme 14 |... 64 6e-11
AT1G75440.1 | Symbols: UBC16 | ubiquitin-conjugating enzyme 16 |... 60 1e-09
AT1G45050.1 | Symbols: ATUBC2-1, UBC15 | Ubiquitin-conjugating e... 59 2e-09
AT4G36410.1 | Symbols: UBC17 | ubiquitin-conjugating enzyme 17 |... 58 4e-09
AT1G53023.1 | Symbols: | Ubiquitin-conjugating enzyme family pr... 56 1e-08
AT5G42990.1 | Symbols: UBC18 | ubiquitin-conjugating enzyme 18 |... 55 3e-08
AT3G17000.1 | Symbols: UBC32 | ubiquitin-conjugating enzyme 32 |... 55 3e-08
AT1G53025.1 | Symbols: | Ubiquitin-conjugating enzyme family pr... 54 7e-08
AT2G16920.1 | Symbols: UBC23, PFU2 | ubiquitin-conjugating enzym... 52 3e-07
AT3G15355.1 | Symbols: UBC25, PFU1 | ubiquitin-conjugating enzym... 51 4e-07
AT2G33770.1 | Symbols: UBC24, ATUBC24, PHO2 | phosphate 2 | chr2... 50 1e-06
>AT5G50870.1 | Symbols: UBC27 | ubiquitin-conjugating enzyme 27 |
chr5:20699626-20700998 REVERSE LENGTH=192
Length = 192
Score = 313 bits (803), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 147/192 (76%), Positives = 173/192 (90%), Gaps = 3/192 (1%)
Query: 1 MIDFARVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLP 60
MIDF+R+QKEL +C ++ + SGIRV PK D +L L GTIPGP+GTPYEGG FQIDIT+P
Sbjct: 1 MIDFSRIQKELQDCERNQDSSGIRVCPKSD-NLTRLTGTIPGPIGTPYEGGTFQIDITMP 59
Query: 61 DGYPFEPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPD 120
DGYPFEPPKM+F+TKVWHPNISSQSGAICLDILKDQWSPALTLKTAL+S+QALLSAP+P
Sbjct: 60 DGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPK 119
Query: 121 DPQDAVVAQQYLKDYQTFVNTARYWTESFAKASSRGIEDKVQKLVEMGFPEAQVRSILES 180
DPQDAVVA+QY+K+YQ FV+TARYWTE+FAK SS +E+KV++LVEMGF +AQVRS +ES
Sbjct: 120 DPQDAVVAEQYMKNYQVFVSTARYWTETFAKKSS--LEEKVKRLVEMGFGDAQVRSAIES 177
Query: 181 VGGDENLALERL 192
GGDENLALE+L
Sbjct: 178 SGGDENLALEKL 189
>AT5G50870.2 | Symbols: UBC27 | ubiquitin-conjugating enzyme 27 |
chr5:20699626-20700998 REVERSE LENGTH=203
Length = 203
Score = 305 bits (781), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 147/203 (72%), Positives = 173/203 (85%), Gaps = 14/203 (6%)
Query: 1 MIDFARVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLP 60
MIDF+R+QKEL +C ++ + SGIRV PK D +L L GTIPGP+GTPYEGG FQIDIT+P
Sbjct: 1 MIDFSRIQKELQDCERNQDSSGIRVCPKSD-NLTRLTGTIPGPIGTPYEGGTFQIDITMP 59
Query: 61 DGYPFEPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPD 120
DGYPFEPPKM+F+TKVWHPNISSQSGAICLDILKDQWSPALTLKTAL+S+QALLSAP+P
Sbjct: 60 DGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPK 119
Query: 121 DPQDAVVAQQ-----------YLKDYQTFVNTARYWTESFAKASSRGIEDKVQKLVEMGF 169
DPQDAVVA+Q Y+K+YQ FV+TARYWTE+FAK SS +E+KV++LVEMGF
Sbjct: 120 DPQDAVVAEQVLLLHHLNHLRYMKNYQVFVSTARYWTETFAKKSS--LEEKVKRLVEMGF 177
Query: 170 PEAQVRSILESVGGDENLALERL 192
+AQVRS +ES GGDENLALE+L
Sbjct: 178 GDAQVRSAIESSGGDENLALEKL 200
>AT5G41700.4 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzyme
8 | chr5:16676072-16677223 FORWARD LENGTH=149
Length = 149
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 91/145 (62%), Gaps = 2/145 (1%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+ KEL + KD S I P + + TI GP +PY GGVF + I P YPF
Sbjct: 5 RILKELKDLQKDPPTSCIFAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 63
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDA 125
+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+ LLS+ +LL+ P PDDP
Sbjct: 64 KPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 122
Query: 126 VVAQQYLKDYQTFVNTARYWTESFA 150
+A Y D + TAR WT+ +A
Sbjct: 123 EIAHMYKTDRAKYEATARNWTQKYA 147
>AT1G64230.5 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=190
Length = 190
Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
Query: 11 LVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPFEPPKM 70
L+E S+D + + + P + + TI GP +PY GGVF + I P YPF+PPK+
Sbjct: 51 LLEKSQDIAMAHVLLCPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKV 109
Query: 71 RFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQQ 130
F TKV+HPN++S +G+ICLDILK+QWSPALT+ LLS+ +LL+ P PDDP +A
Sbjct: 110 AFRTKVFHPNVNS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM 168
Query: 131 YLKDYQTFVNTARYWTESFA 150
Y D + +TAR WT+ +A
Sbjct: 169 YKTDRAKYESTARSWTQKYA 188
>AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=190
Length = 190
Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
Query: 11 LVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPFEPPKM 70
L+E S+D + + + P + + TI GP +PY GGVF + I P YPF+PPK+
Sbjct: 51 LLEKSQDIAMAHVLLCPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKV 109
Query: 71 RFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQQ 130
F TKV+HPN++S +G+ICLDILK+QWSPALT+ LLS+ +LL+ P PDDP +A
Sbjct: 110 AFRTKVFHPNVNS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM 168
Query: 131 YLKDYQTFVNTARYWTESFA 150
Y D + +TAR WT+ +A
Sbjct: 169 YKTDRAKYESTARSWTQKYA 188
>AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=157
Length = 157
Score = 131 bits (329), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 91/153 (59%), Gaps = 10/153 (6%)
Query: 6 RVQKEL--------VECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDI 57
R+ KEL CS + G P + + TI GP +PY GGVF + I
Sbjct: 5 RILKELKDLQKDPPTSCSAEVSGHCYGTCPVAE-DMFHWQATIMGPSDSPYSGGVFLVTI 63
Query: 58 TLPDGYPFEPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAP 117
P YPF+PPK+ F TKV+HPN++S +G+ICLDILK+QWSPALT+ LLS+ +LL+ P
Sbjct: 64 HFPPDYPFKPPKVAFRTKVFHPNVNS-NGSICLDILKEQWSPALTISKVLLSICSLLTDP 122
Query: 118 QPDDPQDAVVAQQYLKDYQTFVNTARYWTESFA 150
PDDP +A Y D + +TAR WT+ +A
Sbjct: 123 NPDDPLVPEIAHMYKTDRAKYESTARSWTQKYA 155
>AT1G78870.2 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enzyme
35 | chr1:29650589-29652203 FORWARD LENGTH=153
Length = 153
Score = 131 bits (329), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 88/132 (66%), Gaps = 2/132 (1%)
Query: 22 GIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNI 81
GI P D ++ I GP +PYEGGVF++++ LP+ YP PK+RF TK++HPNI
Sbjct: 24 GISASPSED-NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 82
Query: 82 SSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLKDYQTFVNT 141
+ G ICLDILKD+WSPAL ++T LLS+QALLSAP PDDP +A+ + + V+T
Sbjct: 83 D-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDT 141
Query: 142 ARYWTESFAKAS 153
A+ WT +A +
Sbjct: 142 AKEWTRLYASGA 153
>AT3G08690.2 | Symbols: UBC11 | ubiquitin-conjugating enzyme 11 |
chr3:2641487-2642489 FORWARD LENGTH=148
Length = 148
Score = 131 bits (329), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 91/145 (62%), Gaps = 3/145 (2%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+ KEL + KD S P + + TI GP +PY GGVF + I P YPF
Sbjct: 5 RILKELKDLQKDPP-SNCSAGPVAE-DMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPF 62
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDA 125
+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+ LLS+ +LL+ P PDDP
Sbjct: 63 KPPKVSFKTKVYHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 126 VVAQQYLKDYQTFVNTARYWTESFA 150
+A Y D + +TAR WT+ +A
Sbjct: 122 EIAHMYKTDRSKYESTARSWTQKYA 146
>AT3G08690.1 | Symbols: UBC11, ATUBC11 | ubiquitin-conjugating
enzyme 11 | chr3:2641487-2642489 FORWARD LENGTH=148
Length = 148
Score = 131 bits (329), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 91/145 (62%), Gaps = 3/145 (2%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+ KEL + KD S P + + TI GP +PY GGVF + I P YPF
Sbjct: 5 RILKELKDLQKDPP-SNCSAGPVAE-DMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPF 62
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDA 125
+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+ LLS+ +LL+ P PDDP
Sbjct: 63 KPPKVSFKTKVYHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 126 VVAQQYLKDYQTFVNTARYWTESFA 150
+A Y D + +TAR WT+ +A
Sbjct: 122 EIAHMYKTDRSKYESTARSWTQKYA 146
>AT1G16890.2 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enzyme
36 | chr1:5776550-5778327 REVERSE LENGTH=153
Length = 153
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 81/114 (71%), Gaps = 1/114 (0%)
Query: 40 IPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSGAICLDILKDQWSP 99
I GP +PYEGGVF++++ LP+ YP PK+RF TK++HPNI + G ICLDILKD+WSP
Sbjct: 41 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID-KLGRICLDILKDKWSP 99
Query: 100 ALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLKDYQTFVNTARYWTESFAKAS 153
AL ++T LLS+QALLSAP PDDP +A+ + + V TA+ WT +A +
Sbjct: 100 ALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYASGA 153
>AT4G27960.1 | Symbols: UBC9 | ubiquitin conjugating enzyme 9 |
chr4:13916065-13917203 REVERSE LENGTH=148
Length = 148
Score = 130 bits (326), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 91/145 (62%), Gaps = 3/145 (2%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+ KEL + KD S P + + TI GP +PY GGVF + I P YPF
Sbjct: 5 RILKELKDLQKDPPTS-CSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 62
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDA 125
+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+ LLS+ +LL+ P PDDP
Sbjct: 63 KPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 126 VVAQQYLKDYQTFVNTARYWTESFA 150
+A Y D + +TAR WT+ +A
Sbjct: 122 EIAHMYKTDKNKYESTARTWTQKYA 146
>AT4G27960.2 | Symbols: UBC9 | ubiquitin conjugating enzyme 9 |
chr4:13916065-13917293 REVERSE LENGTH=178
Length = 178
Score = 130 bits (326), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 91/145 (62%), Gaps = 3/145 (2%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+ KEL + KD S P + + TI GP +PY GGVF + I P YPF
Sbjct: 35 RILKELKDLQKDPPTS-CSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 92
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDA 125
+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+ LLS+ +LL+ P PDDP
Sbjct: 93 KPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 151
Query: 126 VVAQQYLKDYQTFVNTARYWTESFA 150
+A Y D + +TAR WT+ +A
Sbjct: 152 EIAHMYKTDKNKYESTARTWTQKYA 176
>AT1G16890.3 | Symbols: UBC36 | ubiquitin-conjugating enzyme 36 |
chr1:5776550-5778327 REVERSE LENGTH=162
Length = 162
Score = 130 bits (326), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 81/114 (71%), Gaps = 1/114 (0%)
Query: 40 IPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSGAICLDILKDQWSP 99
I GP +PYEGGVF++++ LP+ YP PK+RF TK++HPNI + G ICLDILKD+WSP
Sbjct: 50 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID-KLGRICLDILKDKWSP 108
Query: 100 ALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLKDYQTFVNTARYWTESFAKAS 153
AL ++T LLS+QALLSAP PDDP +A+ + + V TA+ WT +A +
Sbjct: 109 ALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYASGA 162
>AT1G16890.1 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enzyme
36 | chr1:5776550-5777903 REVERSE LENGTH=120
Length = 120
Score = 129 bits (325), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 81/114 (71%), Gaps = 1/114 (0%)
Query: 40 IPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSGAICLDILKDQWSP 99
I GP +PYEGGVF++++ LP+ YP PK+RF TK++HPNI + G ICLDILKD+WSP
Sbjct: 8 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID-KLGRICLDILKDKWSP 66
Query: 100 ALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLKDYQTFVNTARYWTESFAKAS 153
AL ++T LLS+QALLSAP PDDP +A+ + + V TA+ WT +A +
Sbjct: 67 ALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYASGA 120
>AT5G53300.4 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |
chr5:21632802-21633989 REVERSE LENGTH=148
Length = 148
Score = 129 bits (325), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 91/145 (62%), Gaps = 3/145 (2%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+ KEL + KD S P + + TI GP +PY GGVF + I P YPF
Sbjct: 5 RILKELKDLQKDPPTS-CSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 62
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDA 125
+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+ LLS+ +LL+ P PDDP
Sbjct: 63 KPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 126 VVAQQYLKDYQTFVNTARYWTESFA 150
+A Y D + +TAR WT+ +A
Sbjct: 122 EIAHMYKTDKNKYESTARSWTQKYA 146
>AT5G53300.2 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |
chr5:21632802-21633989 REVERSE LENGTH=148
Length = 148
Score = 129 bits (325), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 91/145 (62%), Gaps = 3/145 (2%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+ KEL + KD S P + + TI GP +PY GGVF + I P YPF
Sbjct: 5 RILKELKDLQKDPPTS-CSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 62
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDA 125
+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+ LLS+ +LL+ P PDDP
Sbjct: 63 KPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 126 VVAQQYLKDYQTFVNTARYWTESFA 150
+A Y D + +TAR WT+ +A
Sbjct: 122 EIAHMYKTDKNKYESTARSWTQKYA 146
>AT5G53300.1 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |
chr5:21632802-21633989 REVERSE LENGTH=148
Length = 148
Score = 129 bits (325), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 91/145 (62%), Gaps = 3/145 (2%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+ KEL + KD S P + + TI GP +PY GGVF + I P YPF
Sbjct: 5 RILKELKDLQKDPPTS-CSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 62
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDA 125
+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+ LLS+ +LL+ P PDDP
Sbjct: 63 KPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 126 VVAQQYLKDYQTFVNTARYWTESFA 150
+A Y D + +TAR WT+ +A
Sbjct: 122 EIAHMYKTDKNKYESTARSWTQKYA 146
>AT5G41700.5 | Symbols: UBC8 | ubiquitin conjugating enzyme 8 |
chr5:16676072-16677223 FORWARD LENGTH=148
Length = 148
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 90/145 (62%), Gaps = 3/145 (2%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+ KEL + KD S P + + TI GP +PY GGVF + I P YPF
Sbjct: 5 RILKELKDLQKDPPTS-CSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 62
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDA 125
+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+ LLS+ +LL+ P PDDP
Sbjct: 63 KPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 126 VVAQQYLKDYQTFVNTARYWTESFA 150
+A Y D + TAR WT+ +A
Sbjct: 122 EIAHMYKTDRAKYEATARNWTQKYA 146
>AT5G41700.1 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzyme
8 | chr5:16676072-16677223 FORWARD LENGTH=148
Length = 148
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 90/145 (62%), Gaps = 3/145 (2%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+ KEL + KD S P + + TI GP +PY GGVF + I P YPF
Sbjct: 5 RILKELKDLQKDPPTS-CSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 62
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDA 125
+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+ LLS+ +LL+ P PDDP
Sbjct: 63 KPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 126 VVAQQYLKDYQTFVNTARYWTESFA 150
+A Y D + TAR WT+ +A
Sbjct: 122 EIAHMYKTDRAKYEATARNWTQKYA 146
>AT5G41700.2 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzyme
8 | chr5:16676072-16677223 FORWARD LENGTH=148
Length = 148
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 90/145 (62%), Gaps = 3/145 (2%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+ KEL + KD S P + + TI GP +PY GGVF + I P YPF
Sbjct: 5 RILKELKDLQKDPPTS-CSAGPVAE-DMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 62
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDA 125
+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+ LLS+ +LL+ P PDDP
Sbjct: 63 KPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 126 VVAQQYLKDYQTFVNTARYWTESFA 150
+A Y D + TAR WT+ +A
Sbjct: 122 EIAHMYKTDRAKYEATARNWTQKYA 146
>AT2G16740.1 | Symbols: UBC29 | ubiquitin-conjugating enzyme 29 |
chr2:7267880-7268737 FORWARD LENGTH=148
Length = 148
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 90/145 (62%), Gaps = 3/145 (2%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+ KEL E +D S P G+ + TI GP +PY GGVF ++I P YPF
Sbjct: 5 RILKELKELQRDPPVS-CSAGPTGE-DMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPF 62
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDA 125
+PPK+ F TKV+HPNI+S +G ICLDILKDQWSPALT+ LLS+ +LL+ P PDDP
Sbjct: 63 KPPKVVFRTKVFHPNINS-NGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 126 VVAQQYLKDYQTFVNTARYWTESFA 150
+A Y D + AR WT+ +A
Sbjct: 122 EIAHIYKTDKTKYEAMARSWTQKYA 146
>AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=148
Length = 148
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 91/145 (62%), Gaps = 3/145 (2%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+ KEL + KD S P + + TI GP +PY GGVF + I P YPF
Sbjct: 5 RILKELKDLQKDPPTS-CSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 62
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDA 125
+PPK+ F TKV+HPN++S +G+ICLDILK+QWSPALT+ LLS+ +LL+ P PDDP
Sbjct: 63 KPPKVAFRTKVFHPNVNS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 126 VVAQQYLKDYQTFVNTARYWTESFA 150
+A Y D + +TAR WT+ +A
Sbjct: 122 EIAHMYKTDRAKYESTARSWTQKYA 146
>AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=148
Length = 148
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 91/145 (62%), Gaps = 3/145 (2%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+ KEL + KD S P + + TI GP +PY GGVF + I P YPF
Sbjct: 5 RILKELKDLQKDPPTS-CSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 62
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDA 125
+PPK+ F TKV+HPN++S +G+ICLDILK+QWSPALT+ LLS+ +LL+ P PDDP
Sbjct: 63 KPPKVAFRTKVFHPNVNS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121
Query: 126 VVAQQYLKDYQTFVNTARYWTESFA 150
+A Y D + +TAR WT+ +A
Sbjct: 122 EIAHMYKTDRAKYESTARSWTQKYA 146
>AT5G56150.2 | Symbols: UBC30 | ubiquitin-conjugating enzyme 30 |
chr5:22729756-22730964 FORWARD LENGTH=148
Length = 148
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 92/145 (63%), Gaps = 3/145 (2%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+ KEL + +D S P GD + TI GP +P+ GGVF + I P YPF
Sbjct: 5 RINKELRDLQRDPPVS-CSAGPTGD-DMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPF 62
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDA 125
+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+ LLS+ +LL+ P PDDP
Sbjct: 63 KPPKVAFRTKVYHPNINS-NGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVP 121
Query: 126 VVAQQYLKDYQTFVNTARYWTESFA 150
+A Y D + +TA+ WT+ +A
Sbjct: 122 EIAHIYKTDRVKYESTAQSWTQKYA 146
>AT5G56150.1 | Symbols: UBC30 | ubiquitin-conjugating enzyme 30 |
chr5:22729756-22730964 FORWARD LENGTH=148
Length = 148
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 92/145 (63%), Gaps = 3/145 (2%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+ KEL + +D S P GD + TI GP +P+ GGVF + I P YPF
Sbjct: 5 RINKELRDLQRDPPVS-CSAGPTGD-DMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPF 62
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDA 125
+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+ LLS+ +LL+ P PDDP
Sbjct: 63 KPPKVAFRTKVYHPNINS-NGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVP 121
Query: 126 VVAQQYLKDYQTFVNTARYWTESFA 150
+A Y D + +TA+ WT+ +A
Sbjct: 122 EIAHIYKTDRVKYESTAQSWTQKYA 146
>AT1G78870.1 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enzyme
35 | chr1:29650589-29652203 FORWARD LENGTH=154
Length = 154
Score = 126 bits (317), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 88/133 (66%), Gaps = 3/133 (2%)
Query: 22 GIRVVPKGDTSLVLLLGTIPGPVGTPYEG-GVFQIDITLPDGYPFEPPKMRFTTKVWHPN 80
GI P D ++ I GP +PYEG GVF++++ LP+ YP PK+RF TK++HPN
Sbjct: 24 GISASPSED-NMRYFNVMILGPTQSPYEGRGVFKLELFLPEEYPMAAPKVRFLTKIYHPN 82
Query: 81 ISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLKDYQTFVN 140
I + G ICLDILKD+WSPAL ++T LLS+QALLSAP PDDP +A+ + + V+
Sbjct: 83 ID-KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVD 141
Query: 141 TARYWTESFAKAS 153
TA+ WT +A +
Sbjct: 142 TAKEWTRLYASGA 154
>AT3G08700.1 | Symbols: UBC12 | ubiquitin-conjugating enzyme 12 |
chr3:2643482-2644545 FORWARD LENGTH=149
Length = 149
Score = 120 bits (301), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+ +EL + + + P + + TI GP +PY GGVF + I YPF
Sbjct: 5 RISRELRDMQRHPPAN-CSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPF 63
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDA 125
+PPK+ F TKV+HPNI S+ G+ICLDILK+QWSPA T LLS+ +LL+ P P+DP
Sbjct: 64 KPPKVNFKTKVYHPNIDSK-GSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVP 122
Query: 126 VVAQQYLKDYQTFVNTARYWTESFA 150
+A Y D + +TA+ WT+ +A
Sbjct: 123 EIAHLYKVDKSKYESTAQKWTQKYA 147
>AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 |
Ubiquitin-conjugating enzyme family protein |
chr3:4423569-4424797 REVERSE LENGTH=182
Length = 182
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 91/146 (62%), Gaps = 3/146 (2%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+Q+E+ E + D PKGD +L + TI GP GTPYEGG+F +DI P YPF
Sbjct: 40 RIQREMAELNIDPP-PDCSAGPKGD-NLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPF 97
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDA 125
+PPK+ F T+++H N+ + +G + ++IL+D WSPALT+ L +++++ P+P P
Sbjct: 98 KPPKLVFKTRIYHCNVDT-AGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALP 156
Query: 126 VVAQQYLKDYQTFVNTARYWTESFAK 151
V+A+ YL D + A+ WT FAK
Sbjct: 157 VIARLYLTDREKHDEVAKEWTLRFAK 182
>AT5G25760.2 | Symbols: PEX4 | peroxin4 | chr5:8967983-8969173
FORWARD LENGTH=157
Length = 157
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 78/121 (64%)
Query: 5 ARVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYP 64
AR+ KE E ++ + DT++ I GP TPYEGGVFQ+ ++P+ YP
Sbjct: 6 ARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYP 65
Query: 65 FEPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQD 124
+PP++RF TK++HPN+ ++G ICLDILK+ WSPA TL++ ++ AL++ P+PD P +
Sbjct: 66 LQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLN 125
Query: 125 A 125
Sbjct: 126 C 126
>AT5G25760.1 | Symbols: PEX4, UBC21 | peroxin4 |
chr5:8967983-8969173 FORWARD LENGTH=157
Length = 157
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 78/121 (64%)
Query: 5 ARVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYP 64
AR+ KE E ++ + DT++ I GP TPYEGGVFQ+ ++P+ YP
Sbjct: 6 ARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYP 65
Query: 65 FEPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQD 124
+PP++RF TK++HPN+ ++G ICLDILK+ WSPA TL++ ++ AL++ P+PD P +
Sbjct: 66 LQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLN 125
Query: 125 A 125
Sbjct: 126 C 126
>AT3G24515.1 | Symbols: UBC37 | ubiquitin-conjugating enzyme 37 |
chr3:8934569-8936207 REVERSE LENGTH=409
Length = 409
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 75/127 (59%), Gaps = 5/127 (3%)
Query: 40 IPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSGAICLDIL----KD 95
I GP T Y G+F + I +P+ YPF+PP + F T ++HPNI + SG ICLDIL K
Sbjct: 51 IEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDN-SGRICLDILNLPPKG 109
Query: 96 QWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLKDYQTFVNTARYWTESFAKASSR 155
W P+L + T L S++ LLS P PDD V+++Y + QTF AR TE +AK +
Sbjct: 110 AWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYAKVKAD 169
Query: 156 GIEDKVQ 162
G +Q
Sbjct: 170 GCSTSLQ 176
>AT1G36340.1 | Symbols: UBC31 | ubiquitin-conjugating enzyme 31 |
chr1:13683791-13684924 REVERSE LENGTH=154
Length = 154
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Query: 38 GTIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSGAICLDILKDQW 97
I GP GTPYEGG+F + I P YPF+PPK F T ++HPNI+ + G+IC++ILKD+W
Sbjct: 41 AVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDE-GSICMNILKDKW 99
Query: 98 SPALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLKDYQTFVNTARYWTESFA 150
+PAL ++ LLS+ LL P PDDP + Q + + F AR +T A
Sbjct: 100 TPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREFTARHA 152
>AT5G05080.2 | Symbols: UBC22, ATUBC22 | ubiquitin-conjugating
enzyme 22 | chr5:1498727-1499972 REVERSE LENGTH=251
Length = 251
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 75/130 (57%), Gaps = 2/130 (1%)
Query: 22 GIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNI 81
GI+VV D + I GPVGTPYE G+F++ + L +P PPK F TK++HPN+
Sbjct: 29 GIKVV-VNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNV 87
Query: 82 SSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLKDYQTFVNT 141
+S +G IC++ LK W+P+L L+ L V+ LL P P+ + + L++Y +
Sbjct: 88 AS-NGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQAGKMLLENYDEYARH 146
Query: 142 ARYWTESFAK 151
AR +T AK
Sbjct: 147 ARLYTGIHAK 156
>AT5G05080.1 | Symbols: UBC22, ATUBC22 | ubiquitin-conjugating
enzyme 22 | chr5:1498727-1499972 REVERSE LENGTH=251
Length = 251
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 75/130 (57%), Gaps = 2/130 (1%)
Query: 22 GIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNI 81
GI+VV D + I GPVGTPYE G+F++ + L +P PPK F TK++HPN+
Sbjct: 29 GIKVV-VNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNV 87
Query: 82 SSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLKDYQTFVNT 141
+S +G IC++ LK W+P+L L+ L V+ LL P P+ + + L++Y +
Sbjct: 88 AS-NGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQAGKMLLENYDEYARH 146
Query: 142 ARYWTESFAK 151
AR +T AK
Sbjct: 147 ARLYTGIHAK 156
>AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 |
Ubiquitin-conjugating enzyme family protein |
chr3:4423828-4424797 REVERSE LENGTH=170
Length = 170
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 75/114 (65%), Gaps = 3/114 (2%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+Q+E+ E + D PKGD +L + TI GP GTPYEGG+F +DI P YPF
Sbjct: 40 RIQREMAELNIDPP-PDCSAGPKGD-NLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPF 97
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQP 119
+PPK+ F T+++H N+ + +G + ++IL+D WSPALT+ L +++++ P+P
Sbjct: 98 KPPKLVFKTRIYHCNVDT-AGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEP 150
>AT1G14400.2 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein 1 |
chr1:4927294-4928136 REVERSE LENGTH=152
Length = 152
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 84/143 (58%), Gaps = 10/143 (6%)
Query: 1 MIDFARVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLP 60
M DF R+Q++ +GI P+ D +++L I GP TP++GG F++ +
Sbjct: 10 MRDFKRLQQD--------PPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 61 DGYPFEPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPD 120
+ YP +PP +RF ++++HPNI + G+ICLDIL++QWSP + L S+Q+LL P P+
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYAD-GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPN 119
Query: 121 DPQDAVVAQQYLKDYQTFVNTAR 143
P ++ A+ Y + + + R
Sbjct: 120 SPANSEAARMYSESKREYNRRVR 142
>AT1G14400.1 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein 1 |
chr1:4927294-4928136 REVERSE LENGTH=152
Length = 152
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 84/143 (58%), Gaps = 10/143 (6%)
Query: 1 MIDFARVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLP 60
M DF R+Q++ +GI P+ D +++L I GP TP++GG F++ +
Sbjct: 10 MRDFKRLQQD--------PPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 61 DGYPFEPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPD 120
+ YP +PP +RF ++++HPNI + G+ICLDIL++QWSP + L S+Q+LL P P+
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYAD-GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPN 119
Query: 121 DPQDAVVAQQYLKDYQTFVNTAR 143
P ++ A+ Y + + + R
Sbjct: 120 SPANSEAARMYSESKREYNRRVR 142
>AT2G02760.1 | Symbols: ATUBC2, UBC2 | ubiquiting-conjugating enzyme
2 | chr2:774271-775149 FORWARD LENGTH=152
Length = 152
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 84/143 (58%), Gaps = 10/143 (6%)
Query: 1 MIDFARVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLP 60
M DF R+Q++ +GI P+ D +++L I GP TP++GG F++ +
Sbjct: 10 MRDFKRLQQD--------PPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 61 DGYPFEPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPD 120
+ YP +PP +RF ++++HPNI + G+ICLDIL++QWSP + L S+Q+LL P P+
Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPN 119
Query: 121 DPQDAVVAQQYLKDYQTFVNTAR 143
P ++ A+ + + + + R
Sbjct: 120 SPANSEAARMFSESKREYNRRVR 142
>AT5G62540.1 | Symbols: UBC3 | ubiquitin-conjugating enzyme 3 |
chr5:25104679-25105465 FORWARD LENGTH=150
Length = 150
Score = 96.7 bits (239), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 82/138 (59%), Gaps = 10/138 (7%)
Query: 1 MIDFARVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLP 60
M DF R+QK+ GI P+ D +++ I GP TP++GG F++ +
Sbjct: 10 MWDFKRLQKD--------PPVGISGAPQ-DNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60
Query: 61 DGYPFEPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPD 120
+ YP +PP +RF ++++HPNI + G+ICLDIL++QWSP + L S+Q+LL P PD
Sbjct: 61 EDYPNKPPIVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPD 119
Query: 121 DPQDAVVAQQYLKDYQTF 138
P +A A+ + ++ + +
Sbjct: 120 SPANAEAARLFSENKREY 137
>AT5G41700.3 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzyme
8 | chr5:16676072-16677021 FORWARD LENGTH=145
Length = 145
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 38 GTIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSGAICLDILKDQW 97
TI GP +PY GGVF + I P YPF+PPK+ F TKV+HPNI+S +G+ICLDILK+QW
Sbjct: 35 ATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQW 93
Query: 98 SPALTLKTALLSVQ 111
SPALT+ L Q
Sbjct: 94 SPALTISKVTLIFQ 107
>AT1G78870.3 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enzyme
35 | chr1:29650589-29651858 FORWARD LENGTH=112
Length = 112
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 40 IPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSGAICLDILKDQWSP 99
I GP +PYEGGVF++++ LP+ YP PK+RF TK++HPNI + G ICLDILKD+WSP
Sbjct: 41 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI-DKLGRICLDILKDKWSP 99
Query: 100 ALTLKTALL 108
AL ++T LL
Sbjct: 100 ALQIRTVLL 108
>AT1G63800.1 | Symbols: UBC5 | ubiquitin-conjugating enzyme 5 |
chr1:23667888-23669003 REVERSE LENGTH=185
Length = 185
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 42 GPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPAL 101
GP + YEGGV++I + LPD YP++ P + F TK++HPN+ SG++CLD++ WSP
Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMF 97
Query: 102 TLKTALLS-VQALLSAPQPDDPQDAVVAQQYLKDYQTFVNTARYWTESFAK 151
L + + LL P P DP + A ++D T+ + + E +AK
Sbjct: 98 DLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYAK 148
>AT5G53300.3 | Symbols: | ubiquitin-conjugating enzyme 10 |
chr5:21633187-21633989 REVERSE LENGTH=109
Length = 109
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 64/98 (65%), Gaps = 3/98 (3%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+ KEL + KD S P + + TI GP +PY GGVF + I P YPF
Sbjct: 5 RILKELKDLQKDPPTS-CSAGPVAE-DMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 62
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTL 103
+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+
Sbjct: 63 KPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTI 99
>AT2G46030.1 | Symbols: UBC6 | ubiquitin-conjugating enzyme 6 |
chr2:18932243-18933421 REVERSE LENGTH=183
Length = 183
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 30 DTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSGAIC 89
+ L + T GP + Y+GGV++I + LP+ YP++ P + F K++HPN+ SGA+C
Sbjct: 26 NDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVC 85
Query: 90 LDILKDQWSPALTLKTALLS-VQALLSAPQPDDPQDAVVAQQYLKDYQTFVNTARYWTES 148
LD++ WSP L S + LL P P DP + A ++D + + + E
Sbjct: 86 LDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEK 145
Query: 149 FAK 151
+AK
Sbjct: 146 YAK 148
>AT5G41340.1 | Symbols: UBC4, ATUBC4 | ubiquitin conjugating enzyme
4 | chr5:16538296-16539956 REVERSE LENGTH=187
Length = 187
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Query: 42 GPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPAL 101
GP + Y+GGV++I + LPD YP++ P + F TK++HPN+ SG++CLD++ WSP
Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMF 97
Query: 102 TLKTALLS-VQALLSAPQPDDPQDAVVAQQYLKDYQTFVNTARYWTESFAKASSRGIEDK 160
L + + LL P P DP + A ++D + + + E +AK G EDK
Sbjct: 98 DLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYAKP-GEGSEDK 156
>AT3G20060.1 | Symbols: UBC19 | ubiquitin-conjugating enzyme19 |
chr3:7002927-7004283 REVERSE LENGTH=181
Length = 181
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 3/124 (2%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+Q EL+ A+ GI P+ D ++ GTI G T +EG +++ +T + YPF
Sbjct: 40 RLQSELMGLMMGAD-PGISAFPEED-NIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPF 97
Query: 66 EPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDA 125
+ PK++F T +HPN+ G ICLDIL+D+WS A ++T LLS+Q+LL P P +
Sbjct: 98 KSPKVKFETCCFHPNVD-LYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNN 156
Query: 126 VVAQ 129
AQ
Sbjct: 157 QAAQ 160
>AT3G20060.2 | Symbols: UBC19 | ubiquitin-conjugating enzyme19 |
chr3:7002927-7003727 REVERSE LENGTH=136
Length = 136
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Query: 22 GIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNI 81
GI P+ D ++ GTI G T +EG +++ +T + YPF+ PK++F T +HPN+
Sbjct: 10 GISAFPEED-NIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNV 68
Query: 82 SSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQ 129
G ICLDIL+D+WS A ++T LLS+Q+LL P P + AQ
Sbjct: 69 D-LYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQ 115
>AT1G50490.1 | Symbols: UBC20 | ubiquitin-conjugating enzyme 20 |
chr1:18705005-18706303 REVERSE LENGTH=180
Length = 180
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Query: 23 IRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNIS 82
I P+ D ++ GTI G T +EG +++ ++ + YPF+PPK++F T +HPN+
Sbjct: 55 ISAFPEED-NIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVD 113
Query: 83 SQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQ 129
G ICLDIL+D+WS A ++T LLS+Q+LL P P + AQ
Sbjct: 114 VY-GNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQ 159
>AT2G32790.1 | Symbols: | Ubiquitin-conjugating enzyme family
protein | chr2:13905649-13906271 REVERSE LENGTH=177
Length = 177
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 38 GTIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSGAICLDILKDQW 97
T+ GPVG PYE GVF + + +P YP+EPPK+ F TK++HPNI S+ G I +DIL +W
Sbjct: 64 ATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNI-SEIGEIFVDILGSRW 122
Query: 98 SPALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLKDYQTFVNTARYWTESFAKA 152
S ALT+ LLS+ ++LS P A+ Y KD + + AR WT +AK
Sbjct: 123 SSALTINLVLLSICSILSNPVEPLLVSNHAARLYQKDRKAYEKVAREWTLKYAKG 177
>AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 | sumo
conjugation enzyme 1 | chr3:21428831-21430110 REVERSE
LENGTH=160
Length = 160
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 29 GDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSGAI 88
G +L++ TIPG GT +EGG F + + + YP +PPK +F +HPN+ SG +
Sbjct: 35 GTVNLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYP-SGTV 93
Query: 89 CLDILKDQ--WSPALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLKD 134
CL IL + W PA+T+K L+ +Q LL P P DP + +D
Sbjct: 94 CLSILNEDYGWRPAITVKQILVGIQDLLDTPNPADPAQTDGYHLFCQD 141
>AT5G59300.1 | Symbols: UBC7, ATUBC7 | ubiquitin carrier protein 7 |
chr5:23919868-23921304 REVERSE LENGTH=203
Length = 203
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 14/113 (12%)
Query: 39 TIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSGAICLDILK---- 94
TI GP T YEGG F +T P YP PP +RFT+ +WHPN+ S G +C+ IL
Sbjct: 77 TIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSD-GRVCISILHPPGD 135
Query: 95 ---------DQWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLKDYQTF 138
++W+P T+++ +LS+ ++LS P + P + A+++ F
Sbjct: 136 DPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEF 188
>AT3G55380.1 | Symbols: UBC14 | ubiquitin-conjugating enzyme 14 |
chr3:20531520-20532895 FORWARD LENGTH=167
Length = 167
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 63/113 (55%), Gaps = 14/113 (12%)
Query: 39 TIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSGAICLDILK---- 94
+I GP T YEGG F ++ P+ YP PP + FT+++WHPN+ S G +C+ IL
Sbjct: 41 SIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSD-GKVCISILHPPGD 99
Query: 95 ---------DQWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLKDYQTF 138
++W+P T+++ +LS+ ++LS P + P + A+++ + F
Sbjct: 100 DPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEF 152
>AT3G46460.1 | Symbols: UBC13 | ubiquitin-conjugating enzyme 13 |
chr3:17096120-17097315 REVERSE LENGTH=166
Length = 166
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 14/113 (12%)
Query: 39 TIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSGAICLDILK---- 94
TI GP T YEGG F ++ P YP PP +RFT+ +WHPN+ G +C+ IL
Sbjct: 40 TIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPD-GRVCISILHPPGD 98
Query: 95 ---------DQWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLKDYQTF 138
++W+P T+++ +LS+ ++LS P + P + A+++ + F
Sbjct: 99 DPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEF 151
>AT2G18600.1 | Symbols: | Ubiquitin-conjugating enzyme family
protein | chr2:8073337-8074565 REVERSE LENGTH=185
Length = 185
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 27 PKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSG 86
P G L+ TI G Y G F + + YP E PK++ TKV+HPNI + G
Sbjct: 54 PNGKNDLMNFEVTIKPDEGY-YLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLE-G 111
Query: 87 AICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLKDYQTFVNTAR 143
+CL+IL++ W P L + T + + L + P +DP + A + +TF R
Sbjct: 112 NVCLNILREDWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVR 168
>AT4G36800.2 | Symbols: RCE1 | RUB1 conjugating enzyme 1 |
chr4:17341237-17342148 REVERSE LENGTH=184
Length = 184
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 48 YEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTAL 107
Y G F + YP E PK++ TKV+HPNI + G +CL+IL++ W P L + T +
Sbjct: 73 YHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLE-GNVCLNILREDWKPVLNINTVI 131
Query: 108 LSVQALLSAPQPDDPQD---AVVAQQYLKDYQTFVNTA 142
+ L + P +DP + A V + K ++T V A
Sbjct: 132 YGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRA 169
>AT4G36800.1 | Symbols: RCE1 | RUB1 conjugating enzyme 1 |
chr4:17341237-17342148 REVERSE LENGTH=184
Length = 184
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 48 YEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSGAICLDILKDQWSPALTLKTAL 107
Y G F + YP E PK++ TKV+HPNI + G +CL+IL++ W P L + T +
Sbjct: 73 YHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLE-GNVCLNILREDWKPVLNINTVI 131
Query: 108 LSVQALLSAPQPDDPQD---AVVAQQYLKDYQTFVNTA 142
+ L + P +DP + A V + K ++T V A
Sbjct: 132 YGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRA 169
>AT3G55380.2 | Symbols: UBC14 | ubiquitin-conjugating enzyme 14 |
chr3:20531520-20532895 FORWARD LENGTH=201
Length = 201
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 48/147 (32%)
Query: 39 TIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSGAICLDILK---- 94
+I GP T YEGG F ++ P+ YP PP + FT+++WHPN+ S G +C+ IL
Sbjct: 41 SIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSD-GKVCISILHPPGD 99
Query: 95 ---------DQWSPALTL----------------------------------KTALLSVQ 111
++W+P TL K+ +LS+
Sbjct: 100 DPHGYELASERWTPVHTLVETDMFCSILSLYSDCFSNVRGIYKSGLRNTLEDKSIVLSII 159
Query: 112 ALLSAPQPDDPQDAVVAQQYLKDYQTF 138
++LS P + P + A+++ + F
Sbjct: 160 SMLSGPNDESPANVEAAKEWRDNRAEF 186
>AT1G75440.1 | Symbols: UBC16 | ubiquitin-conjugating enzyme 16 |
chr1:28313623-28314960 FORWARD LENGTH=161
Length = 161
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+QKELVE + +G + K +L + + G GT Y +Q+ + P+ YP
Sbjct: 19 RLQKELVEWQMNPP-TGFKH--KVTDNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPM 75
Query: 66 EPPKMRFTTKV-WHPNISSQSGAICLDILKDQWSPALTLKT 105
E P++ F HP+I S +G ICLDIL D WSPA+T+ +
Sbjct: 76 ESPQVIFLHPAPLHPHIYS-NGHICLDILYDSWSPAMTVSS 115
>AT1G45050.1 | Symbols: ATUBC2-1, UBC15 | Ubiquitin-conjugating
enzyme family protein | chr1:17031337-17032967 FORWARD
LENGTH=161
Length = 161
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 2 IDFARVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPD 61
I R+QKEL E + +G R K +L + G GT Y +Q+ + P+
Sbjct: 15 IACNRLQKELSEWQLNPP-TGFRH--KVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPE 71
Query: 62 GYPFEPPKMRFTTKV-WHPNISSQSGAICLDILKDQWSPALTLKT 105
YP E P++ F + HP+I S +G ICLDIL D WSPA+T+ +
Sbjct: 72 HYPMEAPQVVFVSPAPSHPHIYS-NGHICLDILYDSWSPAMTVNS 115
>AT4G36410.1 | Symbols: UBC17 | ubiquitin-conjugating enzyme 17 |
chr4:17201969-17202890 FORWARD LENGTH=161
Length = 161
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 6 RVQKELVECSKDAEGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPF 65
R+QKE +E + V ++ + +PG T Y +Q+ + P+ YP
Sbjct: 19 RLQKEFMEWQTNPPSGFKHRVSDNLQRWIIEVHGVPG---TLYANETYQLQVEFPEHYPM 75
Query: 66 EPPKMRFTTKV-WHPNISSQSGAICLDILKDQWSPALTLKT 105
E P++ F HP+I S +G ICLD+L D WSPA+ L +
Sbjct: 76 EAPQVIFQHPAPLHPHIYS-NGHICLDVLYDSWSPAMRLSS 115
>AT1G53023.1 | Symbols: | Ubiquitin-conjugating enzyme family
protein | chr1:19754214-19755843 REVERSE LENGTH=316
Length = 316
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 18/123 (14%)
Query: 30 DTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTK--VWHPNISSQSGA 87
++ + LL I G GTPY G+F DI PD YP PPK+ + + +PN+ + G
Sbjct: 83 ESRIDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNL-YKCGK 141
Query: 88 ICLDIL-------KDQWSPA-LTLKTALLSVQALLSAPQP-------DDPQDAVVAQQYL 132
+CL ++ +++W P T+ L+S+QAL+ +P + + + Y
Sbjct: 142 VCLSLISTWTGKKREKWLPKESTMLQLLVSIQALILNEKPYYNEPGYEKSMGTPLGESYS 201
Query: 133 KDY 135
KDY
Sbjct: 202 KDY 204
>AT5G42990.1 | Symbols: UBC18 | ubiquitin-conjugating enzyme 18 |
chr5:17244206-17245904 REVERSE LENGTH=161
Length = 161
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Query: 2 IDFARVQKELVECSKDA-EGSGIRVVPKGDTSLVLLLGTIPGPVGTPYEGGVFQIDITLP 60
I R+QKEL E + G RV +L + + G GT Y + + + P
Sbjct: 15 IACNRLQKELSEWQVNPPTGFKHRVT----DNLQKWVIEVTGAPGTLYANETYNLQVEFP 70
Query: 61 DGYPFEPPKMRFTTKV-WHPNISSQSGAICLDILKDQWSPALTLKT 105
YP E P++ F HP+I S +G ICLDIL D WSPA+T+ +
Sbjct: 71 QHYPMEAPQVIFVPPAPLHPHIYS-NGHICLDILYDSWSPAMTVSS 115
>AT3G17000.1 | Symbols: UBC32 | ubiquitin-conjugating enzyme 32 |
chr3:5797296-5799467 FORWARD LENGTH=309
Length = 309
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 40 IPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVWHPNISSQSGA-ICLDILK---D 95
I GP T +EGG++ I LP YPF+PP T PN ++ ICL I +
Sbjct: 47 IRGPGDTEFEGGIYHGRIQLPADYPFKPPSFMLLT----PNGRFETNTKICLSISNYHPE 102
Query: 96 QWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLKD-YQTFVNTARYWTESFAKASS 154
W P+ +++TAL+++ A + P P A+ + Y KD +T +R +
Sbjct: 103 HWQPSWSVRTALVALIAFM----PTSPNGALGSVDYPKDERRTLAIKSRETPPKYGSPER 158
Query: 155 RGIEDKVQKLV 165
+ I D++ + +
Sbjct: 159 QKIIDEIHQYI 169
>AT1G53025.1 | Symbols: | Ubiquitin-conjugating enzyme family
protein | chr1:19757072-19759474 REVERSE LENGTH=543
Length = 543
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 11/100 (11%)
Query: 30 DTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTK--VWHPNISSQSGA 87
++ + LL I G GTPY G+F DI PD YP PP + + + +PN+ + G
Sbjct: 297 ESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYN-CGK 355
Query: 88 ICLDIL-------KDQWSPA-LTLKTALLSVQALLSAPQP 119
+CL +L +++W P T+ L+S+QAL+ +P
Sbjct: 356 VCLSLLGTWAGSAREKWLPNESTMLQLLVSIQALILNEKP 395
>AT2G16920.1 | Symbols: UBC23, PFU2 | ubiquitin-conjugating enzyme
23 | chr2:7334559-7338827 REVERSE LENGTH=1102
Length = 1102
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 35 LLLGTIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVW--HPNISSQSGAICLDI 92
LL I G GTPY+ G+F D LP YP PP + + W +PN+ + G +CL +
Sbjct: 881 LLRAVIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNL-YEEGKVCLSL 939
Query: 93 L-------KDQWSP-ALTLKTALLSVQALLSAPQP 119
L + W P + ++ L+S+Q L+ +P
Sbjct: 940 LNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNSKP 974
>AT3G15355.1 | Symbols: UBC25, PFU1 | ubiquitin-conjugating enzyme
25 | chr3:5183858-5186669 FORWARD LENGTH=609
Length = 609
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 30 DTSLVLLLGTIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTTKVW--HPNISSQSGA 87
++ + LL I G GTPY G+F DI PD YP PP + + + +PN+ + G
Sbjct: 358 ESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYN-CGK 416
Query: 88 ICLDIL-------KDQWSPAL-TLKTALLSVQALLSAPQP 119
+CL +L +++W P T+ L+S+Q L+ +P
Sbjct: 417 VCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGLILNQKP 456
>AT2G33770.1 | Symbols: UBC24, ATUBC24, PHO2 | phosphate 2 |
chr2:14277785-14281482 REVERSE LENGTH=907
Length = 907
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 35 LLLGTIPGPVGTPYEGGVFQIDITLPDGYPFEPPKMRFTT--KVWHPNISSQSGAICLDI 92
LL + G GTPY G+F DI LP YP EPP + + + +PN+ +SG +CL +
Sbjct: 693 LLRAALVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNL-YESGRVCLSL 751
Query: 93 LKDQWSPALT 102
L + WS + T
Sbjct: 752 L-NTWSGSGT 760