Miyakogusa Predicted Gene
- Lj1g3v1464130.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1464130.1 Non Chatacterized Hit- tr|I1KBY8|I1KBY8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33388
PE,75.92,0,HLH,Helix-loop-helix domain; HLH, helix-loop-helix
DNA-binding domain,Helix-loop-helix domain; no
de,NODE_36109_length_1560_cov_43.597435.path1.1
(336 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G50915.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 186 2e-47
AT5G50915.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 186 2e-47
AT3G23690.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 159 2e-39
AT1G68920.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 157 1e-38
AT1G68920.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 157 1e-38
AT1G68920.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 157 1e-38
AT1G10120.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 156 2e-38
AT5G48560.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 155 4e-38
AT1G26260.2 | Symbols: CIB5 | cryptochrome-interacting basic-hel... 152 3e-37
AT1G26260.1 | Symbols: CIB5 | cryptochrome-interacting basic-hel... 152 3e-37
AT1G26260.3 | Symbols: CIB5 | cryptochrome-interacting basic-hel... 152 3e-37
AT3G07340.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 150 9e-37
AT1G59640.2 | Symbols: ZCW32, BPE, BPEp | BIG PETAL P | chr1:219... 149 3e-36
AT1G59640.1 | Symbols: ZCW32, BPE, BPEub | BIG PETAL P | chr1:21... 147 9e-36
AT4G34530.1 | Symbols: CIB1 | cryptochrome-interacting basic-hel... 146 2e-35
AT2G18300.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 140 1e-33
AT2G18300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 140 1e-33
AT2G18300.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 140 1e-33
AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 137 9e-33
AT4G36540.1 | Symbols: BEE2 | BR enhanced expression 2 | chr4:17... 136 3e-32
AT4G36540.2 | Symbols: BEE2 | BR enhanced expression 2 | chr4:17... 135 3e-32
AT3G57800.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 135 6e-32
AT1G73830.2 | Symbols: BEE3 | BR enhanced expression 3 | chr1:27... 134 6e-32
AT1G73830.1 | Symbols: BEE3 | BR enhanced expression 3 | chr1:27... 134 7e-32
AT2G42300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 131 7e-31
AT1G18400.1 | Symbols: BEE1 | BR enhanced expression 1 | chr1:63... 128 6e-30
AT1G25330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 123 2e-28
AT3G57800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 112 5e-25
AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 | chr2:10319646-1032... 95 8e-20
AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 | chr4:15079489-1508... 93 2e-19
AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 | chr5:23483670-2348... 92 5e-19
AT2G42300.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 82 4e-16
AT1G35460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 75 9e-14
AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-l... 74 1e-13
AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-l... 74 1e-13
AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting fact... 74 2e-13
AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 73 3e-13
AT1G51140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 73 3e-13
AT2G42280.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 73 3e-13
AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 72 5e-13
AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 72 5e-13
AT4G02590.2 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA... 72 5e-13
AT4G02590.1 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA... 72 5e-13
AT4G09180.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 72 5e-13
AT4G02590.3 | Symbols: UNE12 | basic helix-loop-helix (bHLH) DNA... 72 7e-13
AT1G03040.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 6e-12
AT1G03040.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 6e-12
AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 68 1e-11
AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 2e-11
AT2G43140.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 66 3e-11
AT2G43140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 66 4e-11
AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA... 65 5e-11
AT1G05805.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 63 4e-10
AT4G33880.1 | Symbols: RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 | chr... 62 5e-10
AT2G14760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 62 5e-10
AT1G27740.1 | Symbols: RSL4 | root hair defective 6-like 4 | chr... 62 5e-10
AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 62 7e-10
AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH) DNA-b... 62 8e-10
AT2G46970.1 | Symbols: PIL1 | phytochrome interacting factor 3-l... 61 1e-09
AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH) DNA-b... 61 1e-09
AT3G59060.4 | Symbols: PIL6, PIF5 | phytochrome interacting fact... 59 4e-09
AT3G59060.3 | Symbols: PIL6, PIF5 | phytochrome interacting fact... 59 4e-09
AT3G59060.2 | Symbols: PIL6, PIF5 | phytochrome interacting fact... 59 4e-09
AT3G59060.1 | Symbols: PIL6, PIF5 | phytochrome interacting fact... 59 4e-09
AT2G43010.2 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interact... 58 7e-09
AT2G43010.1 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interact... 58 7e-09
AT5G43175.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 57 3e-08
AT2G14760.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 1e-07
AT1G66470.1 | Symbols: RHD6 | ROOT HAIR DEFECTIVE6 | chr1:247953... 52 4e-07
AT5G37800.1 | Symbols: RSL1, ATRSL1 | RHD SIX-LIKE 1 | chr5:1503... 52 4e-07
AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 5e-07
AT5G61270.1 | Symbols: PIF7 | phytochrome-interacting factor7 | ... 52 6e-07
AT5G61270.2 | Symbols: PIF7 | phytochrome-interacting factor7 | ... 52 6e-07
AT2G40200.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 51 1e-06
AT1G02340.1 | Symbols: HFR1, RSF1, FBI1, REP1 | basic helix-loop... 51 1e-06
AT4G28811.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 4e-06
>AT5G50915.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:20710764-20712252 REVERSE
LENGTH=286
Length = 286
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/138 (65%), Positives = 108/138 (78%), Gaps = 1/138 (0%)
Query: 105 PQSKDDATEGRSKKQKKSNGGVKDQDKARTEKKEQRKCPEEPPTGYIHVRARRGQATDSH 164
P + + + R +K + SN K+ + R KK++R EEPPT YIHVRARRGQATDSH
Sbjct: 89 PSAITNTGKTRGRKARNSNNS-KEGVEGRKSKKQKRGSKEEPPTDYIHVRARRGQATDSH 147
Query: 165 SLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVN 224
SLAERVRREKISERM+ LQ LVPGCDKVTGKALMLDEIINYVQ+LQ QVEFLSMKL S++
Sbjct: 148 SLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSIS 207
Query: 225 PMFYDMATDLDTLLVRPE 242
P+ YD +DLD L+++ E
Sbjct: 208 PVVYDFGSDLDGLILQSE 225
>AT5G50915.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:20710764-20712252 REVERSE
LENGTH=286
Length = 286
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/138 (65%), Positives = 108/138 (78%), Gaps = 1/138 (0%)
Query: 105 PQSKDDATEGRSKKQKKSNGGVKDQDKARTEKKEQRKCPEEPPTGYIHVRARRGQATDSH 164
P + + + R +K + SN K+ + R KK++R EEPPT YIHVRARRGQATDSH
Sbjct: 89 PSAITNTGKTRGRKARNSNNS-KEGVEGRKSKKQKRGSKEEPPTDYIHVRARRGQATDSH 147
Query: 165 SLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVN 224
SLAERVRREKISERM+ LQ LVPGCDKVTGKALMLDEIINYVQ+LQ QVEFLSMKL S++
Sbjct: 148 SLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSIS 207
Query: 225 PMFYDMATDLDTLLVRPE 242
P+ YD +DLD L+++ E
Sbjct: 208 PVVYDFGSDLDGLILQSE 225
>AT3G23690.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:8528933-8530655 REVERSE
LENGTH=371
Length = 371
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 103/160 (64%), Gaps = 17/160 (10%)
Query: 94 RRSRKDSSLNEPQSKDDATEGRSKKQKKSNGGVKDQDKARTEKKEQRKC----------- 142
+ S SSL SK G SK K+S QD A + K KC
Sbjct: 126 KESPASSSLTASNSKVSGENGGSKGGKRSK-----QDVAGSSKNGVEKCDSKGDNKDDAK 180
Query: 143 PEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEI 202
P E P YIHVRARRGQATDSHSLAER RREKISERM LQ LVPGC+++TGKA+MLDEI
Sbjct: 181 PPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEI 240
Query: 203 INYVQSLQNQVEFLSMKLASVNP-MFYDMATDLDTLLVRP 241
INYVQSLQ QVEFLSMKLA+VNP M ++ L T +++P
Sbjct: 241 INYVQSLQRQVEFLSMKLATVNPRMEFNANASLSTEMIQP 280
>AT1G68920.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:25915620-25917675 FORWARD
LENGTH=486
Length = 486
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/144 (59%), Positives = 105/144 (72%), Gaps = 9/144 (6%)
Query: 97 RKDSSLNEPQSKDDATEGRSKKQKKSNGGVKDQDKARTEKKEQRKCPEEPPTGYIHVRAR 156
R S EP + D E R+ +Q ++ G K+ + K++ ++ + P GYIHVRAR
Sbjct: 253 RSQQSEEEPDNNGD--EKRNDEQSPNSPG----KKSNSGKQQGKQSSDPPKDGYIHVRAR 306
Query: 157 RGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 216
RGQAT+SHSLAERVRREKISERMK LQ LVPGC+KVTGKA+MLDEIINYVQSLQ QVEFL
Sbjct: 307 RGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 366
Query: 217 SMKLASVNPMFYDMATDLDTLLVR 240
SMKLA+VNP M +L+ LL +
Sbjct: 367 SMKLATVNPQ---MDFNLEGLLAK 387
>AT1G68920.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:25915620-25917675 FORWARD
LENGTH=486
Length = 486
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/144 (59%), Positives = 105/144 (72%), Gaps = 9/144 (6%)
Query: 97 RKDSSLNEPQSKDDATEGRSKKQKKSNGGVKDQDKARTEKKEQRKCPEEPPTGYIHVRAR 156
R S EP + D E R+ +Q ++ G K+ + K++ ++ + P GYIHVRAR
Sbjct: 253 RSQQSEEEPDNNGD--EKRNDEQSPNSPG----KKSNSGKQQGKQSSDPPKDGYIHVRAR 306
Query: 157 RGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 216
RGQAT+SHSLAERVRREKISERMK LQ LVPGC+KVTGKA+MLDEIINYVQSLQ QVEFL
Sbjct: 307 RGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 366
Query: 217 SMKLASVNPMFYDMATDLDTLLVR 240
SMKLA+VNP M +L+ LL +
Sbjct: 367 SMKLATVNPQ---MDFNLEGLLAK 387
>AT1G68920.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:25915620-25917675 FORWARD
LENGTH=485
Length = 485
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/144 (59%), Positives = 105/144 (72%), Gaps = 9/144 (6%)
Query: 97 RKDSSLNEPQSKDDATEGRSKKQKKSNGGVKDQDKARTEKKEQRKCPEEPPTGYIHVRAR 156
R S EP + D E R+ +Q ++ G K+ + K++ ++ + P GYIHVRAR
Sbjct: 252 RSQQSEEEPDNNGD--EKRNDEQSPNSPG----KKSNSGKQQGKQSSDPPKDGYIHVRAR 305
Query: 157 RGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 216
RGQAT+SHSLAERVRREKISERMK LQ LVPGC+KVTGKA+MLDEIINYVQSLQ QVEFL
Sbjct: 306 RGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 365
Query: 217 SMKLASVNPMFYDMATDLDTLLVR 240
SMKLA+VNP M +L+ LL +
Sbjct: 366 SMKLATVNPQ---MDFNLEGLLAK 386
>AT1G10120.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:3304228-3305984 REVERSE
LENGTH=366
Length = 366
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/133 (61%), Positives = 98/133 (73%), Gaps = 7/133 (5%)
Query: 108 KDDATEGRSKKQKKSNGGVKDQDKARTEKKEQRKCPEEPPTGYIHVRARRGQATDSHSLA 167
++D G + QKK DQ K T KE + E P YIH+RARRGQAT+SHSLA
Sbjct: 165 QEDPQRGNDQSQKKHK---NDQSK-ETVNKESSQSEEAPKENYIHMRARRGQATNSHSLA 220
Query: 168 ERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPMF 227
ERVRREKISERM+ LQ LVPGC+K+TGKA+MLDEIINYVQSLQ QVEFLSMKLA+VNP
Sbjct: 221 ERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP-- 278
Query: 228 YDMATDLDTLLVR 240
++ D+D +L +
Sbjct: 279 -EINIDIDRILAK 290
>AT5G48560.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:19684160-19686871 FORWARD
LENGTH=498
Length = 498
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 106/175 (60%), Gaps = 28/175 (16%)
Query: 86 VTQKVTPKRR-SRKDSSLNEPQSKDDATEGRS-----KKQKKSNGGVKDQDKARTEK--- 136
V+ +VTP SRK S+ + +SK++ S K + NGG K K+ EK
Sbjct: 208 VSPEVTPGGEFSRKRKSVPKGKSKENPISTASPSPSFSKTAEKNGG-KGGSKSSEEKGGK 266
Query: 137 ------------------KEQRKCPEEPPTGYIHVRARRGQATDSHSLAERVRREKISER 178
K P EPP YIHVRARRGQATDSHSLAERVRREKI ER
Sbjct: 267 RRREEEDDEEEEGEGEGNKSNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGER 326
Query: 179 MKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDMATD 233
MK LQ LVPGC+KVTGKALMLDEIINYVQSLQ QVEFLSMKL+SVN D D
Sbjct: 327 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVD 381
>AT1G26260.2 | Symbols: CIB5 | cryptochrome-interacting
basic-helix-loop-helix 5 | chr1:9087214-9089035 FORWARD
LENGTH=390
Length = 390
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 108/163 (66%), Gaps = 16/163 (9%)
Query: 78 DKLEIGEQVTQKVTPKRRSRKDSSLNEPQSKDDATEGRSKKQKKSNGGVKDQDKARTEKK 137
D + G+ ++ + K+R R D E KKQK + +K +EK+
Sbjct: 161 DDAKCGQTSSKGFSSKKRKRIGK---------DCEEEEDKKQKDEQSPTSNANKTNSEKQ 211
Query: 138 EQRKCPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKAL 197
+ GYIH+RARRGQAT+SHSLAERVRREKISERMK LQ LVPGCDKVTGKA+
Sbjct: 212 PSDSLKD----GYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAV 267
Query: 198 MLDEIINYVQSLQNQVEFLSMKLASVNPMFYDMATDLDTLLVR 240
MLDEIINYVQSLQ Q+EFLSMKL++VNP+ + +L++LL +
Sbjct: 268 MLDEIINYVQSLQCQIEFLSMKLSAVNPV---LDFNLESLLAK 307
>AT1G26260.1 | Symbols: CIB5 | cryptochrome-interacting
basic-helix-loop-helix 5 | chr1:9087214-9089035 FORWARD
LENGTH=390
Length = 390
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 108/163 (66%), Gaps = 16/163 (9%)
Query: 78 DKLEIGEQVTQKVTPKRRSRKDSSLNEPQSKDDATEGRSKKQKKSNGGVKDQDKARTEKK 137
D + G+ ++ + K+R R D E KKQK + +K +EK+
Sbjct: 161 DDAKCGQTSSKGFSSKKRKRIGK---------DCEEEEDKKQKDEQSPTSNANKTNSEKQ 211
Query: 138 EQRKCPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKAL 197
+ GYIH+RARRGQAT+SHSLAERVRREKISERMK LQ LVPGCDKVTGKA+
Sbjct: 212 PSDSLKD----GYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAV 267
Query: 198 MLDEIINYVQSLQNQVEFLSMKLASVNPMFYDMATDLDTLLVR 240
MLDEIINYVQSLQ Q+EFLSMKL++VNP+ + +L++LL +
Sbjct: 268 MLDEIINYVQSLQCQIEFLSMKLSAVNPV---LDFNLESLLAK 307
>AT1G26260.3 | Symbols: CIB5 | cryptochrome-interacting
basic-helix-loop-helix 5 | chr1:9087214-9089035 FORWARD
LENGTH=339
Length = 339
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 108/163 (66%), Gaps = 16/163 (9%)
Query: 78 DKLEIGEQVTQKVTPKRRSRKDSSLNEPQSKDDATEGRSKKQKKSNGGVKDQDKARTEKK 137
D + G+ ++ + K+R R D E KKQK + +K +EK+
Sbjct: 110 DDAKCGQTSSKGFSSKKRKRIGK---------DCEEEEDKKQKDEQSPTSNANKTNSEKQ 160
Query: 138 EQRKCPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKAL 197
+ GYIH+RARRGQAT+SHSLAERVRREKISERMK LQ LVPGCDKVTGKA+
Sbjct: 161 PSDSLKD----GYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAV 216
Query: 198 MLDEIINYVQSLQNQVEFLSMKLASVNPMFYDMATDLDTLLVR 240
MLDEIINYVQSLQ Q+EFLSMKL++VNP+ + +L++LL +
Sbjct: 217 MLDEIINYVQSLQCQIEFLSMKLSAVNPV---LDFNLESLLAK 256
>AT3G07340.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:2341188-2343288 REVERSE
LENGTH=456
Length = 456
Score = 150 bits (380), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 112/175 (64%), Gaps = 22/175 (12%)
Query: 60 DNEPSITKN-------LSPQSSMVVDKLEIGEQVTQKVTPKRRSRKDSSLNEPQSKDDAT 112
+NEP IT N SP + + GE + +++ KR+++ S N P + +
Sbjct: 167 NNEPPITTNEKMPRVSSSPVFKPLASHVPAGES-SGELSRKRKTK--SKQNSPSAVSSSK 223
Query: 113 EGRSKKQKKSNGGVKDQDKARTEKKEQ---RKCPEEPPTGYIHVRARRGQATDSHSLAER 169
E K+ D D R +K E+ + +P YIHVRARRGQATDSHSLAER
Sbjct: 224 EIEEKE---------DSDPKRCKKSEENGDKTKSIDPYKDYIHVRARRGQATDSHSLAER 274
Query: 170 VRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVN 224
VRREKISERMK LQ LVPGC+KVTGKALMLDEIINYVQSLQ QVEFLSMKL+SVN
Sbjct: 275 VRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVN 329
>AT1G59640.2 | Symbols: ZCW32, BPE, BPEp | BIG PETAL P |
chr1:21909635-21911030 REVERSE LENGTH=343
Length = 343
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/146 (57%), Positives = 104/146 (71%), Gaps = 4/146 (2%)
Query: 82 IGEQVTQKVTPKRRSRKDSSLN-EPQSKDDATEGRSKKQK--KSNGGVKDQDKARTEKKE 138
+ + V + ++ + R+D S + + S A+EG +K+QK + G + + TE E
Sbjct: 63 LSQAVIEGISGAWKRREDESKSAKIVSTIGASEGENKRQKIDEVCDGKAEAESLGTET-E 121
Query: 139 QRKCPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALM 198
Q+K EP YIHVRARRGQATDSHSLAER RREKISERMK LQ LVPGC+KV GKAL+
Sbjct: 122 QKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 181
Query: 199 LDEIINYVQSLQNQVEFLSMKLASVN 224
LDEIINY+QSLQ QVEFLSMKL +VN
Sbjct: 182 LDEIINYIQSLQRQVEFLSMKLEAVN 207
>AT1G59640.1 | Symbols: ZCW32, BPE, BPEub | BIG PETAL P |
chr1:21909464-21911030 REVERSE LENGTH=264
Length = 264
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/146 (57%), Positives = 103/146 (70%), Gaps = 4/146 (2%)
Query: 82 IGEQVTQKVTPKRRSRKDSSLN-EPQSKDDATEGRSKKQKKSN--GGVKDQDKARTEKKE 138
+ + V + ++ + R+D S + + S A+EG +K+QK G + + TE E
Sbjct: 63 LSQAVIEGISGAWKRREDESKSAKIVSTIGASEGENKRQKIDEVCDGKAEAESLGTET-E 121
Query: 139 QRKCPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALM 198
Q+K EP YIHVRARRGQATDSHSLAER RREKISERMK LQ LVPGC+KV GKAL+
Sbjct: 122 QKKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALV 181
Query: 199 LDEIINYVQSLQNQVEFLSMKLASVN 224
LDEIINY+QSLQ QVEFLSMKL +VN
Sbjct: 182 LDEIINYIQSLQRQVEFLSMKLEAVN 207
>AT4G34530.1 | Symbols: CIB1 | cryptochrome-interacting
basic-helix-loop-helix 1 | chr4:16498466-16499946
FORWARD LENGTH=335
Length = 335
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/138 (56%), Positives = 94/138 (68%), Gaps = 9/138 (6%)
Query: 97 RKDSSLNEPQSKDDATEGRSKKQKKSNGGVKD---------QDKARTEKKEQRKCPEEPP 147
+K ++N ++ E +SK +++NG K +++ + E
Sbjct: 107 KKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEK 166
Query: 148 TGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQ 207
T YIHVRARRGQATDSHS+AERVRREKISERMK LQ LVPGCDK+TGKA MLDEIINYVQ
Sbjct: 167 TDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQ 226
Query: 208 SLQNQVEFLSMKLASVNP 225
SLQ Q+EFLSMKLA VNP
Sbjct: 227 SLQRQIEFLSMKLAIVNP 244
>AT2G18300.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:7953022-7954446 REVERSE
LENGTH=337
Length = 337
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 100/157 (63%), Gaps = 10/157 (6%)
Query: 77 VDKLEI----GEQVTQKVTPKRRSRKDSSLNEPQSKDDA----TEGRSKKQKKSNGGVKD 128
VD +E+ GE+ T+ V K + + + E Q + E S + KSN G
Sbjct: 103 VDTMEVLLKTGEE-TRAVALKNKRKPEVKTREEQKTEKKIKVEAETESSMKGKSNMG-NT 160
Query: 129 QDKARTEKKEQRKCPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPG 188
+ + T K+ + E YIHVRARRGQATD HSLAER RREKIS++MK LQ +VPG
Sbjct: 161 EASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPG 220
Query: 189 CDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNP 225
C+KVTGKA MLDEIINYVQ LQ QVEFLSMKLA +NP
Sbjct: 221 CNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNP 257
>AT2G18300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:7953022-7954446 REVERSE
LENGTH=335
Length = 335
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 100/157 (63%), Gaps = 10/157 (6%)
Query: 77 VDKLEI----GEQVTQKVTPKRRSRKDSSLNEPQSKDDA----TEGRSKKQKKSNGGVKD 128
VD +E+ GE+ T+ V K + + + E Q + E S + KSN G
Sbjct: 103 VDTMEVLLKTGEE-TRAVALKNKRKPEVKTREEQKTEKKIKVEAETESSMKGKSNMG-NT 160
Query: 129 QDKARTEKKEQRKCPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPG 188
+ + T K+ + E YIHVRARRGQATD HSLAER RREKIS++MK LQ +VPG
Sbjct: 161 EASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPG 220
Query: 189 CDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNP 225
C+KVTGKA MLDEIINYVQ LQ QVEFLSMKLA +NP
Sbjct: 221 CNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNP 257
>AT2G18300.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:7952546-7954446 REVERSE
LENGTH=364
Length = 364
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 100/157 (63%), Gaps = 10/157 (6%)
Query: 77 VDKLEI----GEQVTQKVTPKRRSRKDSSLNEPQSKDDA----TEGRSKKQKKSNGGVKD 128
VD +E+ GE+ T+ V K + + + E Q + E S + KSN G
Sbjct: 103 VDTMEVLLKTGEE-TRAVALKNKRKPEVKTREEQKTEKKIKVEAETESSMKGKSNMG-NT 160
Query: 129 QDKARTEKKEQRKCPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPG 188
+ + T K+ + E YIHVRARRGQATD HSLAER RREKIS++MK LQ +VPG
Sbjct: 161 EASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPG 220
Query: 189 CDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNP 225
C+KVTGKA MLDEIINYVQ LQ QVEFLSMKLA +NP
Sbjct: 221 CNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNP 257
>AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:25133117-25134600 REVERSE
LENGTH=281
Length = 281
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 73/87 (83%), Gaps = 1/87 (1%)
Query: 138 EQRKCPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKAL 197
EQ+ PE PP YIHVRARRGQATD HSLAER RREKISE+M LQ ++PGC+K+ GKAL
Sbjct: 139 EQKNKPE-PPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKAL 197
Query: 198 MLDEIINYVQSLQNQVEFLSMKLASVN 224
+LDEIINY+QSLQ QVEFLSMKL VN
Sbjct: 198 VLDEIINYIQSLQRQVEFLSMKLEVVN 224
>AT4G36540.1 | Symbols: BEE2 | BR enhanced expression 2 |
chr4:17243699-17244965 FORWARD LENGTH=304
Length = 304
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 82/114 (71%)
Query: 112 TEGRSKKQKKSNGGVKDQDKARTEKKEQRKCPEEPPTGYIHVRARRGQATDSHSLAERVR 171
TE R KK+ K+ + K ++ E YIHVRARRG+ATD HSLAER R
Sbjct: 100 TEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERAR 159
Query: 172 REKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNP 225
REKIS++MK LQ +VPGC+KVTGKA MLDEIINYVQSLQ QVEFLSMKL+ +NP
Sbjct: 160 REKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINP 213
>AT4G36540.2 | Symbols: BEE2 | BR enhanced expression 2 |
chr4:17243699-17244965 FORWARD LENGTH=302
Length = 302
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/114 (61%), Positives = 82/114 (71%)
Query: 112 TEGRSKKQKKSNGGVKDQDKARTEKKEQRKCPEEPPTGYIHVRARRGQATDSHSLAERVR 171
TE R KK+ K+ + K ++ E YIHVRARRG+ATD HSLAER R
Sbjct: 100 TEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERAR 159
Query: 172 REKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNP 225
REKIS++MK LQ +VPGC+KVTGKA MLDEIINYVQSLQ QVEFLSMKL+ +NP
Sbjct: 160 REKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINP 213
>AT3G57800.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:21408034-21411321 REVERSE
LENGTH=379
Length = 379
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 75/90 (83%), Gaps = 3/90 (3%)
Query: 150 YIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSL 209
Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ LVPGCDK+ G AL+LDEIIN+VQSL
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 260
Query: 210 QNQVEFLSMKLASVNPMFYDMATDLDTLLV 239
Q QVE LSM+LA+VNP + +LDT+L
Sbjct: 261 QRQVEMLSMRLAAVNPR---IDFNLDTILA 287
>AT1G73830.2 | Symbols: BEE3 | BR enhanced expression 3 |
chr1:27760027-27761346 FORWARD LENGTH=260
Length = 260
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 84 EQVTQKVTPKRRSRKDSSLNEPQSKDDATEGRSKKQKKSNGGVKDQDKARTEKKEQRKCP 143
E +Q T KR+S ++ S D T S Q NG + ++ + K +
Sbjct: 78 ESSSQFDTKKRKSLMEAVSTSENSVSDQTLSTSSAQVSINGNISTKNNSSRRGKRSKNRE 137
Query: 144 EEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEII 203
EE +HVRARRGQATDSHS+AERVRR KI+ER+K LQ +VPGC K G A MLDEII
Sbjct: 138 EEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEII 197
Query: 204 NYVQSLQNQVEFLSMKLASVNPMFYDMATDLDTL 237
NYVQSLQNQVEFLSMKL + + +YD ++ D +
Sbjct: 198 NYVQSLQNQVEFLSMKLTAASS-YYDFNSETDAV 230
>AT1G73830.1 | Symbols: BEE3 | BR enhanced expression 3 |
chr1:27760027-27761346 FORWARD LENGTH=261
Length = 261
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 96/154 (62%), Gaps = 1/154 (0%)
Query: 84 EQVTQKVTPKRRSRKDSSLNEPQSKDDATEGRSKKQKKSNGGVKDQDKARTEKKEQRKCP 143
E +Q T KR+S ++ S D T S Q NG + ++ + K +
Sbjct: 78 ESSSQFDTKKRKSLMEAVSTSENSVSDQTLSTSSAQVSINGNISTKNNSSRRGKRSKNRE 137
Query: 144 EEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEII 203
EE +HVRARRGQATDSHS+AERVRR KI+ER+K LQ +VPGC K G A MLDEII
Sbjct: 138 EEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEII 197
Query: 204 NYVQSLQNQVEFLSMKLASVNPMFYDMATDLDTL 237
NYVQSLQNQVEFLSMKL + + +YD ++ D +
Sbjct: 198 NYVQSLQNQVEFLSMKLTAASS-YYDFNSETDAV 230
>AT2G42300.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17621542-17624635 FORWARD
LENGTH=327
Length = 327
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 75/90 (83%), Gaps = 3/90 (3%)
Query: 150 YIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSL 209
Y+HVRARRGQATD+HSLAER RREKI+ RMK LQ LVPGCDK+ G AL+LDEIIN+VQ+L
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTL 241
Query: 210 QNQVEFLSMKLASVNPMFYDMATDLDTLLV 239
Q QVE LSM+LA+VNP + +LD++L
Sbjct: 242 QRQVEMLSMRLAAVNP---RIDFNLDSILA 268
>AT1G18400.1 | Symbols: BEE1 | BR enhanced expression 1 |
chr1:6331464-6333576 FORWARD LENGTH=260
Length = 260
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 71/87 (81%), Gaps = 1/87 (1%)
Query: 151 IHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQ 210
+HVRARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC K G A MLDEIINYVQSLQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202
Query: 211 NQVEFLSMKLASVNPMFYDMATDLDTL 237
NQVEFLSMKL + + FYD ++ D +
Sbjct: 203 NQVEFLSMKLTAASS-FYDFNSETDAV 228
>AT1G25330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:8880515-8882018 REVERSE
LENGTH=223
Length = 223
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 75/95 (78%), Gaps = 5/95 (5%)
Query: 147 PTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYV 206
P +HVRA+RGQATDSHSLAERVRREKI+ER+K LQ LVPGC K G A+MLD II+YV
Sbjct: 98 PKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYV 157
Query: 207 QSLQNQVEFLSMKLASVNPMFYDMATDLDTLLVRP 241
+SLQNQ+EFLSMKL++ + + DL++L + P
Sbjct: 158 RSLQNQIEFLSMKLSAASACY-----DLNSLDIEP 187
>AT3G57800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:21408034-21411321 REVERSE
LENGTH=426
Length = 426
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 75/137 (54%), Gaps = 50/137 (36%)
Query: 150 YIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVT---------------- 193
Y+HVRARRGQATDSHSLAER RREKI+ RMK LQ LVPGCDK T
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKVCFGVHL 260
Query: 194 -------------------------------GKALMLDEIINYVQSLQNQVEFLSMKLAS 222
G AL+LDEIIN+VQSLQ QVE LSM+LA+
Sbjct: 261 LMISGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDEIINHVQSLQRQVEMLSMRLAA 320
Query: 223 VNPMFYDMATDLDTLLV 239
VNP + +LDT+L
Sbjct: 321 VNPR---IDFNLDTILA 334
>AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 |
chr2:10319646-10322177 REVERSE LENGTH=350
Length = 350
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 146 PPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINY 205
PP +RARRGQATD HS+AER+RRE+I+ERMK LQ LVP +K T KA MLDEII+Y
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDY 189
Query: 206 VQSLQNQVEFLSM 218
V+ LQ QV+ LSM
Sbjct: 190 VKFLQLQVKVLSM 202
>AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 |
chr4:15079489-15081606 REVERSE LENGTH=310
Length = 310
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 153 VRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 212
VRARRGQATD HS+AER+RRE+I+ERMK LQ LVP +K T KA MLDEII+YV+ LQ Q
Sbjct: 130 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQLQ 188
Query: 213 VEFLSM 218
V+ LSM
Sbjct: 189 VKVLSM 194
>AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 |
chr5:23483670-23484889 REVERSE LENGTH=297
Length = 297
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 60/85 (70%), Gaps = 5/85 (5%)
Query: 153 VRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 212
VRARRGQATD HS+AER+RRE+I+ERMK LQ LVP +K T KA MLDEII YV+ LQ Q
Sbjct: 99 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQLQ 157
Query: 213 VEFLSMK----LASVNPMFYDMATD 233
V+ LSM SV P ++ +
Sbjct: 158 VKVLSMSRLGGAGSVGPRLNGLSAE 182
>AT2G42300.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17621542-17623469 FORWARD
LENGTH=233
Length = 233
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 39/43 (90%)
Query: 150 YIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKV 192
Y+HVRARRGQATD+HSLAER RREKI+ RMK LQ LVPGCDKV
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKV 224
>AT1G35460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:13040092-13041907 FORWARD
LENGTH=259
Length = 259
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 50/65 (76%)
Query: 153 VRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 212
VRA+RG AT S+AERVRR +IS+R++RLQ LVP DK T A ML+E + YV++LQ+Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 213 VEFLS 217
++ L+
Sbjct: 241 IQELT 245
>AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704276-8706538 REVERSE LENGTH=478
Length = 478
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 65/102 (63%), Gaps = 9/102 (8%)
Query: 117 KKQKKSNGGVKDQDKARTEKKEQRKCPEEPPTGYIHVRARRGQATDSHSLAERVRREKIS 176
+K+K+ D+ ++R+E+ +Q + +R +A + H+L+ER RR++I+
Sbjct: 250 RKRKEREATTTDETESRSEETKQARVST--------TSTKRSRAAEVHNLSERKRRDRIN 301
Query: 177 ERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 218
ERMK LQ L+P C+K + KA MLDE I Y++SLQ Q++ +SM
Sbjct: 302 ERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSM 342
>AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704525-8706538 REVERSE LENGTH=478
Length = 478
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 65/102 (63%), Gaps = 9/102 (8%)
Query: 117 KKQKKSNGGVKDQDKARTEKKEQRKCPEEPPTGYIHVRARRGQATDSHSLAERVRREKIS 176
+K+K+ D+ ++R+E+ +Q + +R +A + H+L+ER RR++I+
Sbjct: 250 RKRKEREATTTDETESRSEETKQARVST--------TSTKRSRAAEVHNLSERKRRDRIN 301
Query: 177 ERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 218
ERMK LQ L+P C+K + KA MLDE I Y++SLQ Q++ +SM
Sbjct: 302 ERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSM 342
>AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting factor
3-like 5 | chr2:8704525-8706237 REVERSE LENGTH=407
Length = 407
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 65/102 (63%), Gaps = 9/102 (8%)
Query: 117 KKQKKSNGGVKDQDKARTEKKEQRKCPEEPPTGYIHVRARRGQATDSHSLAERVRREKIS 176
+K+K+ D+ ++R+E+ +Q + +R +A + H+L+ER RR++I+
Sbjct: 179 RKRKEREATTTDETESRSEETKQARV--------STTSTKRSRAAEVHNLSERKRRDRIN 230
Query: 177 ERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 218
ERMK LQ L+P C+K + KA MLDE I Y++SLQ Q++ +SM
Sbjct: 231 ERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSM 271
>AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14220173 FORWARD
LENGTH=413
Length = 413
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 155 ARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVE 214
++R +A H L+ER RR+KI+E MK LQ L+P C K T ++ MLD++I YV+SLQ+Q++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQ 331
Query: 215 FLSMKLASVNPMFY 228
SM + PM Y
Sbjct: 332 MFSMGHVMIPPMMY 345
>AT1G51140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:18943802-18945613 REVERSE
LENGTH=379
Length = 379
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 45/64 (70%)
Query: 153 VRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 212
+RA+RG AT S+AERVRR KISERM++LQ LVP D T A MLD + Y++ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 213 VEFL 216
V+ L
Sbjct: 364 VKAL 367
>AT2G42280.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17611428-17613163 REVERSE
LENGTH=359
Length = 359
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 153 VRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 212
+RA+RG AT S+AERVRR +ISERM++LQ LVP DK T + MLD ++Y++ LQ Q
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 213 VEFLS 217
+ L+
Sbjct: 339 YKILN 343
>AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 8/123 (6%)
Query: 100 SSLNEPQSKDDATEGRSKKQKKSNGGVKDQD----KARTEKKEQRKCPEEPPTGYIHVRA 155
SS+ S D +E S K+ + ++D D E + RK TG + +
Sbjct: 283 SSVGSGNSLDGPSESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTG---LGS 339
Query: 156 RRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 215
+R ++ + H+L+ER RR++I+E+M+ LQ L+P C+KV KA MLDE I Y++SLQ QV+
Sbjct: 340 KRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKSLQLQVQI 398
Query: 216 LSM 218
+SM
Sbjct: 399 MSM 401
>AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 8/123 (6%)
Query: 100 SSLNEPQSKDDATEGRSKKQKKSNGGVKDQD----KARTEKKEQRKCPEEPPTGYIHVRA 155
SS+ S D +E S K+ + ++D D E + RK TG + +
Sbjct: 283 SSVGSGNSLDGPSESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTG---LGS 339
Query: 156 RRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 215
+R ++ + H+L+ER RR++I+E+M+ LQ L+P C+KV KA MLDE I Y++SLQ QV+
Sbjct: 340 KRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKSLQLQVQI 398
Query: 216 LSM 218
+SM
Sbjct: 399 MSM 401
>AT4G02590.2 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:1137968-1140306
REVERSE LENGTH=310
Length = 310
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 65/93 (69%), Gaps = 5/93 (5%)
Query: 142 CPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDE 201
P +P + VRARRGQATD HS+AER+RRE+I+ER++ LQ LVP +K T +A M+DE
Sbjct: 135 APHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDE 193
Query: 202 IINYVQSLQNQVEFLSMK----LASVNPMFYDM 230
I++YV+ L+ QV+ LSM +V P+ DM
Sbjct: 194 IVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDM 226
>AT4G02590.1 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:1137968-1140306
REVERSE LENGTH=310
Length = 310
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 65/93 (69%), Gaps = 5/93 (5%)
Query: 142 CPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDE 201
P +P + VRARRGQATD HS+AER+RRE+I+ER++ LQ LVP +K T +A M+DE
Sbjct: 135 APHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDE 193
Query: 202 IINYVQSLQNQVEFLSMK----LASVNPMFYDM 230
I++YV+ L+ QV+ LSM +V P+ DM
Sbjct: 194 IVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDM 226
>AT4G09180.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:5847513-5849500 FORWARD
LENGTH=262
Length = 262
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 151 IHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQ 210
VRA+RG AT S+AERVRR +IS+R+++LQ LVP DK T A ML+E + YV+ LQ
Sbjct: 182 FRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQ 241
Query: 211 NQVEFLS 217
Q++ L+
Sbjct: 242 RQIQELT 248
>AT4G02590.3 | Symbols: UNE12 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:1137968-1140117
REVERSE LENGTH=247
Length = 247
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 65/93 (69%), Gaps = 5/93 (5%)
Query: 142 CPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDE 201
P +P + VRARRGQATD HS+AER+RRE+I+ER++ LQ LVP +K T +A M+DE
Sbjct: 72 APHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDE 130
Query: 202 IINYVQSLQNQVEFLSMK----LASVNPMFYDM 230
I++YV+ L+ QV+ LSM +V P+ DM
Sbjct: 131 IVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDM 163
>AT1G03040.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:704279-706457 REVERSE
LENGTH=297
Length = 297
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 61/82 (74%), Gaps = 5/82 (6%)
Query: 153 VRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 212
VRARRGQATD HS+AER+RRE+I+ER++ LQ LVP +K T +A M+DEI++YV+ L+ Q
Sbjct: 139 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 197
Query: 213 VEFLSMK----LASVNPMFYDM 230
V+ LSM +V P+ +M
Sbjct: 198 VKVLSMSRLGGAGAVAPLVTEM 219
>AT1G03040.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:704279-706457 REVERSE
LENGTH=302
Length = 302
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 61/82 (74%), Gaps = 5/82 (6%)
Query: 153 VRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 212
VRARRGQATD HS+AER+RRE+I+ER++ LQ LVP +K T +A M+DEI++YV+ L+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 202
Query: 213 VEFLSMK----LASVNPMFYDM 230
V+ LSM +V P+ +M
Sbjct: 203 VKVLSMSRLGGAGAVAPLVTEM 224
>AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14228719-14230288 FORWARD
LENGTH=307
Length = 307
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Query: 156 RRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQV-E 214
+R +A + H+LAER RREKI+ERMK LQ+L+P C+K T K ML+++I YV+SL+ Q+ +
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKST-KVSMLEDVIEYVKSLEMQINQ 205
Query: 215 FLSMKLASVN 224
F+ +N
Sbjct: 206 FMPHMAMGMN 215
>AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14221970-14224075 FORWARD
LENGTH=445
Length = 445
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Query: 156 RRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 215
+R + + H+LAER RREKI+E+MK LQ+L+P C+K T K LD+ I YV+SLQ+Q++
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKST-KVSTLDDAIEYVKSLQSQIQG 310
Query: 216 L---SMKLASVNPMFYDMATDLD 235
+ M + MA D++
Sbjct: 311 MMSPMMNAGNTQQFMPHMAMDMN 333
>AT2G43140.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17931680-17935639 REVERSE
LENGTH=309
Length = 309
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 153 VRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 212
RA+RG AT S+AER RR +IS ++K+LQ LVP DK T A MLD + +++ LQ+Q
Sbjct: 231 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 290
Query: 213 VEFL 216
VE L
Sbjct: 291 VESL 294
>AT2G43140.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:17932376-17935639 REVERSE
LENGTH=297
Length = 297
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 153 VRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 212
RA+RG AT S+AER RR +IS ++K+LQ LVP DK T A MLD + +++ LQ+Q
Sbjct: 233 ARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQ 292
Query: 213 VE 214
VE
Sbjct: 293 VE 294
>AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17863-19848
FORWARD LENGTH=399
Length = 399
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 126 VKDQDKARTEKKEQRKCPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRL 185
+ D D + + E+ G V +R +A H+ +ER RR+KI++RMK LQ+L
Sbjct: 180 IDDHDSVCHSRPQMEDEEEKKAGGKSSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKL 239
Query: 186 VPGCDKVTGKALMLDEIINYVQSLQNQVEFLS 217
VP K T KA MLDE+I Y++ LQ QV +S
Sbjct: 240 VPNSSK-TDKASMLDEVIEYLKQLQAQVSMMS 270
>AT1G05805.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1744843-1747427 FORWARD
LENGTH=362
Length = 362
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 153 VRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 212
+RA+RG AT S+AER RR +IS ++K+LQ LVP DK T + MLD + +++ LQ+Q
Sbjct: 283 IRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQ 342
Query: 213 VEFL 216
++ L
Sbjct: 343 LQNL 346
>AT4G33880.1 | Symbols: RSL2 | ROOT HAIR DEFECTIVE 6-LIKE 2 |
chr4:16239566-16241052 REVERSE LENGTH=352
Length = 352
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 128 DQDKARTEKKEQRKCPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVP 187
DQD + + P + RA RG ATD SL R RRE+I+ER++ LQ LVP
Sbjct: 241 DQDGGGEDSSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVP 300
Query: 188 GCDKVTGKALMLDEIINYVQSLQNQVEFLS 217
KV + ML+E ++YV+ LQ Q++ LS
Sbjct: 301 NGTKVD-ISTMLEEAVHYVKFLQLQIKLLS 329
>AT2G14760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:6321840-6323312 REVERSE
LENGTH=328
Length = 328
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 153 VRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 212
RA RG ATD SL R RRE+I+ER++ LQ LVP KV + ML+E + YV+ LQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVD-ISTMLEEAVQYVKFLQLQ 295
Query: 213 VEFLSM-KLASVNPMFY---DMATDL 234
++ LS L P+ Y D+ DL
Sbjct: 296 IKLLSSDDLWMYAPIAYNGMDIGLDL 321
>AT1G27740.1 | Symbols: RSL4 | root hair defective 6-like 4 |
chr1:9654753-9655806 FORWARD LENGTH=258
Length = 258
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 154 RARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQV 213
RA +G ATD SL R RREKI+ER+K LQ LVP KV + ML+E ++YV+ LQ Q+
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 226
Query: 214 EFLSM-KLASVNPMFYD 229
+ LS L P+ Y+
Sbjct: 227 KLLSSDDLWMYAPLAYN 243
>AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14219887 FORWARD
LENGTH=340
Length = 340
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 155 ARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVE 214
++R +A H L+ER RR+KI+E MK LQ L+P C K T ++ MLD++I YV+SLQ+Q++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQ 331
Query: 215 FLSMKL 220
+++
Sbjct: 332 GKHLRI 337
>AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:26785332-26786338
REVERSE LENGTH=210
Length = 210
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Query: 164 HSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLS-MKLAS 222
H+L+E+ RR KI+E+MK LQ+L+P +K T KA MLDE I Y++ LQ QV+ L+ M
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
Query: 223 VNPM 226
+NPM
Sbjct: 157 LNPM 160
>AT2G46970.1 | Symbols: PIL1 | phytochrome interacting factor 3-like
1 | chr2:19295617-19297678 REVERSE LENGTH=416
Length = 416
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
Query: 151 IHVRAR-----RGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINY 205
+H R R R ++T+ H L ER RR++ +++M+ LQ L+P C K KA +LDE I Y
Sbjct: 216 VHARTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKASLLDEAIKY 274
Query: 206 VQSLQNQVEFLSMKLASVNP 225
+++LQ QV+ +SM + P
Sbjct: 275 MRTLQLQVQMMSMGNGLIRP 294
>AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17414167-17415945
FORWARD LENGTH=373
Length = 373
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 159 QATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSM 218
+A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 219 K 219
+
Sbjct: 256 R 256
>AT3G59060.4 | Symbols: PIL6, PIF5 | phytochrome interacting factor
3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=444
Length = 444
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 156 RRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 215
RR +A + H+L+ER RR++I+ERMK LQ L+P C + T KA +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQV 311
Query: 216 LSM 218
+ M
Sbjct: 312 MWM 314
>AT3G59060.3 | Symbols: PIL6, PIF5 | phytochrome interacting factor
3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=444
Length = 444
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 156 RRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 215
RR +A + H+L+ER RR++I+ERMK LQ L+P C + T KA +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQV 311
Query: 216 LSM 218
+ M
Sbjct: 312 MWM 314
>AT3G59060.2 | Symbols: PIL6, PIF5 | phytochrome interacting factor
3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=444
Length = 444
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 156 RRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 215
RR +A + H+L+ER RR++I+ERMK LQ L+P C + T KA +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQV 311
Query: 216 LSM 218
+ M
Sbjct: 312 MWM 314
>AT3G59060.1 | Symbols: PIL6, PIF5 | phytochrome interacting factor
3-like 6 | chr3:21828189-21829895 REVERSE LENGTH=442
Length = 442
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Query: 156 RRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 215
RR +A + H+L+ER RR++I+ERMK LQ L+P C + T KA +LDE I+Y++SLQ Q++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQV 311
Query: 216 LSM 218
+ M
Sbjct: 312 MWM 314
>AT2G43010.2 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interacting
factor 4 | chr2:17887003-17888823 FORWARD LENGTH=428
Length = 428
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 156 RRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 215
RR +A + H+L+ER RR++I+ERMK LQ L+P C K T KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 312
Query: 216 L 216
+
Sbjct: 313 M 313
>AT2G43010.1 | Symbols: PIF4, SRL2, AtPIF4 | phytochrome interacting
factor 4 | chr2:17887003-17888823 FORWARD LENGTH=430
Length = 430
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 156 RRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEF 215
RR +A + H+L+ER RR++I+ERMK LQ L+P C K T KA +LDE I+Y++SLQ Q++
Sbjct: 254 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQV 312
Query: 216 L 216
+
Sbjct: 313 M 313
>AT5G43175.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:17334261-17335234 FORWARD
LENGTH=223
Length = 223
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 153 VRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 212
+A RG A+D SL R RRE+I++R+K LQ LVP KV + ML++ ++YV+ LQ Q
Sbjct: 132 AKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVD-ISTMLEDAVHYVKFLQLQ 190
Query: 213 VEFLS 217
++ LS
Sbjct: 191 IKLLS 195
>AT2G14760.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:6321840-6323312 REVERSE
LENGTH=341
Length = 341
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 18/99 (18%)
Query: 153 VRARRGQATDSHSLAERV-------------RREKISERMKRLQRLVPGCDKVTGKALML 199
RA RG ATD SL R+ RRE+I+ER++ LQ LVP KV + ML
Sbjct: 237 TRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTKVD-ISTML 295
Query: 200 DEIINYVQSLQNQVEFLSM-KLASVNPMFY---DMATDL 234
+E + YV+ LQ Q++ LS L P+ Y D+ DL
Sbjct: 296 EEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLDL 334
>AT1G66470.1 | Symbols: RHD6 | ROOT HAIR DEFECTIVE6 |
chr1:24795326-24796598 FORWARD LENGTH=298
Length = 298
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 99 DSSLNEPQSKDDATEGRSKKQKKSNGGVKDQDKARTEKKEQRKCPEEPPTGYIHVRARRG 158
DS++ S++++ +S K+S+ G Q + K +P T
Sbjct: 151 DSTVVTTGSRNESLSPKSAGNKRSHTGESTQPSKKLSSGVTGKTKPKPTTS--------- 201
Query: 159 QATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLS 217
D SLA + RRE+ISER+K LQ LVP KV ML++ I+YV+ LQ QV+ L+
Sbjct: 202 -PKDPQSLAAKNRRERISERLKILQELVPNGTKVD-LVTMLEKAISYVKFLQVQVKVLA 258
>AT5G37800.1 | Symbols: RSL1, ATRSL1 | RHD SIX-LIKE 1 |
chr5:15036197-15037574 FORWARD LENGTH=307
Length = 307
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 135 EKKEQRKCPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPGCDKVTG 194
E + K P G I +A D SLA + RRE+ISER+K LQ LVP KV
Sbjct: 184 ENTQLSKKPSSGTNGKIKPKATT-SPKDPQSLAAKNRRERISERLKVLQELVPNGTKVD- 241
Query: 195 KALMLDEIINYVQSLQNQVEFLS 217
ML++ I YV+ LQ QV+ L+
Sbjct: 242 LVTMLEKAIGYVKFLQVQVKVLA 264
>AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:7507720-7508841 FORWARD
LENGTH=373
Length = 373
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 160 ATDSHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFL 216
+TD ++A R RRE+ISE+++ LQ LVPG K+ A MLDE NY++ L+ QV+ L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTKMD-TASMLDEAANYLKFLRAQVKAL 331
>AT5G61270.1 | Symbols: PIF7 | phytochrome-interacting factor7 |
chr5:24638873-24640439 REVERSE LENGTH=366
Length = 366
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Query: 114 GRSKKQKKSNGGVKDQDKARTEKKEQRKCPEEPPTGYIHVRARRGQATDSHSLAERVRRE 173
GRS K ++ G +D ++ +E ++ +E RRG+A H+ +ER RR+
Sbjct: 123 GRSLKTART--GDRDYFRSGSETQDTEGDEQETRGEAGRSNGRRGRAAAIHNESERRRRD 180
Query: 174 KISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMK 219
+I++RM+ LQ+L+P K K +LD++I +++ LQ QV+F+S++
Sbjct: 181 RINQRMRTLQKLLPTASKAD-KVSILDDVIEHLKQLQAQVQFMSLR 225
>AT5G61270.2 | Symbols: PIF7 | phytochrome-interacting factor7 |
chr5:24638873-24640031 REVERSE LENGTH=278
Length = 278
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Query: 114 GRSKKQKKSNGGVKDQDKARTEKKEQRKCPEEPPTGYIHVRARRGQATDSHSLAERVRRE 173
GRS K ++ G +D ++ +E ++ +E RRG+A H+ +ER RR+
Sbjct: 35 GRSLKTART--GDRDYFRSGSETQDTEGDEQETRGEAGRSNGRRGRAAAIHNESERRRRD 92
Query: 174 KISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMK 219
+I++RM+ LQ+L+P K K +LD++I +++ LQ QV+F+S++
Sbjct: 93 RINQRMRTLQKLLPTASKAD-KVSILDDVIEHLKQLQAQVQFMSLR 137
>AT2G40200.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:16791098-16792027 FORWARD
LENGTH=254
Length = 254
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 9/80 (11%)
Query: 163 SHSLAERVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLAS 222
SH LAE+ RR++I+ + L++LVP DK+ KA +L +I V+ L+ + A+
Sbjct: 66 SHRLAEKRRRDRINSHLTALRKLVPNSDKL-DKAALLATVIEQVKELKQK--------AA 116
Query: 223 VNPMFYDMATDLDTLLVRPE 242
+P+F D+ T+ D + V+PE
Sbjct: 117 ESPIFQDLPTEADEVTVQPE 136
>AT1G02340.1 | Symbols: HFR1, RSF1, FBI1, REP1 | basic
helix-loop-helix (bHLH) DNA-binding superfamily protein
| chr1:465933-467685 REVERSE LENGTH=292
Length = 292
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 3/59 (5%)
Query: 169 RVRREKISERMKRLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPMF 227
R R EK+S +M++LQ+LVP C K T K +LD+ I Y+++LQ Q++ +S VNP F
Sbjct: 144 RRRDEKMSNKMRKLQQLVPNCHK-TDKVSVLDKTIEYMKNLQLQLQMMST--VGVNPYF 199
>AT4G28811.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14225335-14227840 FORWARD
LENGTH=544
Length = 544
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Query: 129 QDKARTEKKEQRKCPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKRLQRLVPG 188
+DK R E + + EE + +R +A D H+L+ER RRE+I+ERMK LQ L+P
Sbjct: 330 EDKKREETIAEIQGTEE---AHGSTSRKRSRAADMHNLSERRRRERINERMKTLQELLPR 386
Query: 189 CDKVTGKALMLDEIINYVQSLQNQVEFLS 217
C K T K ML+++I YV+SLQ Q++ +S
Sbjct: 387 CRK-TDKVSMLEDVIEYVKSLQLQIQMMS 414