Miyakogusa Predicted Gene

Lj1g3v1464080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1464080.1 Non Chatacterized Hit- tr|E1ZMV5|E1ZMV5_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,38.95,0.000000001,POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY
PROTEIN,NULL; TRNA-NUCLEOTIDYLTRANSFERASE/POLY(A)
POLYMERA,CUFF.27341.1
         (275 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G23690.1 | Symbols:  | Polynucleotide adenylyltransferase fam...   290   7e-79
AT3G48830.1 | Symbols:  | polynucleotide adenylyltransferase fam...   253   7e-68
AT1G28090.3 | Symbols:  | Polynucleotide adenylyltransferase fam...   229   2e-60
AT1G28090.1 | Symbols:  | Polynucleotide adenylyltransferase fam...   229   2e-60
AT1G28090.2 | Symbols:  | Polynucleotide adenylyltransferase fam...   229   2e-60
AT2G17580.1 | Symbols:  | Polynucleotide adenylyltransferase fam...   100   2e-21

>AT5G23690.1 | Symbols:  | Polynucleotide adenylyltransferase family
           protein | chr5:7987664-7990466 FORWARD LENGTH=527
          Length = 527

 Score =  290 bits (742), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 146/262 (55%), Positives = 182/262 (69%), Gaps = 2/262 (0%)

Query: 5   MSSLDYLTSLLLQDRLLMEINYMLAYGFGEASLRLLWKFGLLDILLPFQAAYFAHHGFQR 64
           + +L  L   L + R+LME+NYMLAYG  EASLRLLWKFG+L+ILLP QAAY A  GF+R
Sbjct: 264 IKNLSLLVQRLDKGRILMEMNYMLAYGSAEASLRLLWKFGILEILLPIQAAYLARSGFRR 323

Query: 65  LDKRTNMXXXXXXXXXXXXAPNLPCHSSLWVGILALHKTLSDRPRDPLVVASFSLAVHNG 124
            DKRTNM            AP+ PCHSSLW+ ILA HK L+D+PR P+VVA+FSLAVHN 
Sbjct: 324 RDKRTNMLLSLFANLDKLLAPDRPCHSSLWIAILAFHKALADKPRSPIVVAAFSLAVHNC 383

Query: 125 GNLLEAVNIARMISNPHYVRFPELLDP-SGLDAKALEDETLELAESIQGTLLQMTDQYFV 183
           G++LEAV I + I+ PH   F EL++P   LD + L DE ++L  SI+  L QMTD YF+
Sbjct: 384 GDILEAVEITKKITRPHDKSFFELVEPEENLDFQTLLDEVMDLDASIEDALNQMTDAYFI 443

Query: 184 SKALADYPQAPHSDLVIIPLGLYRKTFRIFGCVKRSADK-KFLSKQDRNIDYESLAHGNL 242
           SKA++ YPQAP+SDLV IPL LY +  RIF CVK    +  F +KQ   I+Y SL  G  
Sbjct: 444 SKAMSAYPQAPYSDLVFIPLQLYLRAGRIFDCVKNEETRIGFEAKQGSKIEYGSLNSGYF 503

Query: 243 QETRHVFARIVFDTIYPLHQDQ 264
            E RHVFAR+VFDT++PL+  Q
Sbjct: 504 PEIRHVFARVVFDTVFPLNLSQ 525


>AT3G48830.1 | Symbols:  | polynucleotide adenylyltransferase family
           protein / RNA recognition motif (RRM)-containing protein
           | chr3:18103272-18110216 FORWARD LENGTH=881
          Length = 881

 Score =  253 bits (647), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 124/225 (55%), Positives = 158/225 (70%)

Query: 5   MSSLDYLTSLLLQDRLLMEINYMLAYGFGEASLRLLWKFGLLDILLPFQAAYFAHHGFQR 64
           + +L +L   L + R+L+E+NYMLAYG  EASLRLLWKFG+L+ILLP QAAY    GF+R
Sbjct: 260 LKNLSFLVQRLHRGRILLEMNYMLAYGSAEASLRLLWKFGILEILLPIQAAYLVRTGFKR 319

Query: 65  LDKRTNMXXXXXXXXXXXXAPNLPCHSSLWVGILALHKTLSDRPRDPLVVASFSLAVHNG 124
            DKR+N+            AP+ PCHSSLW+ ILALHK L+D+PR P VVA+FSLAVHNG
Sbjct: 320 RDKRSNLLLSLFGNLDKLLAPDKPCHSSLWLTILALHKALADQPRYPSVVAAFSLAVHNG 379

Query: 125 GNLLEAVNIARMISNPHYVRFPELLDPSGLDAKALEDETLELAESIQGTLLQMTDQYFVS 184
           G++LEAV   R ++ PH   F ELL+P  +D++ L DE ++   SI+  L QMTD  F+S
Sbjct: 380 GDVLEAVKNTRKVTKPHNRSFFELLEPEEMDSQTLLDEVMDFDSSIKEALGQMTDGRFIS 439

Query: 185 KALADYPQAPHSDLVIIPLGLYRKTFRIFGCVKRSADKKFLSKQD 229
           KA+A YPQAP+SD+V IPL LY    RIF CVK +  K F+ KQD
Sbjct: 440 KAMAAYPQAPYSDMVFIPLQLYLDARRIFECVKENGQKGFVPKQD 484


>AT1G28090.3 | Symbols:  | Polynucleotide adenylyltransferase family
           protein | chr1:9796236-9798891 FORWARD LENGTH=478
          Length = 478

 Score =  229 bits (584), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 120/262 (45%), Positives = 168/262 (64%), Gaps = 8/262 (3%)

Query: 7   SLDYLTSLLLQ---DRLLMEINYMLAYGFGEASLRLLWKFGLLDILLPFQAAYFAHHGFQ 63
           S+  L+S LL+    R+ MEINYMLAYG  EASLRLLW+FGL++ILLP QA+Y    GF+
Sbjct: 216 SVKELSSSLLRLDPSRIRMEINYMLAYGSAEASLRLLWRFGLMEILLPIQASYLVSQGFR 275

Query: 64  RLDKRTNMXXXXXXXXXXXXAPNLPCHSSLWVGILALHKTLSDRPRDPLVVASFSLAVHN 123
           R D R+NM            AP+ PC   LW+GILA HK L D+PRDP VVASF LA+++
Sbjct: 276 RRDGRSNMLLSLFRNLDRLVAPDRPCSEFLWIGILAFHKALVDQPRDPTVVASFCLAIYS 335

Query: 124 GGNLLEAVNIARMISNPHYVRFPELLDPSGLDAKA---LEDETLELAESIQGTLLQMTDQ 180
             +L EA+ IAR  S  H   F EL  P    A +   +  + ++LAESI+    ++ ++
Sbjct: 336 EVSLSEAIAIARSNSKQHNSHFQELSSPEKDTADSESKISQQVIKLAESIRSAARKLNNR 395

Query: 181 YFVSKALADYPQAPHSDLVIIPLGLYRKTFRIFGCVKRSADKKF--LSKQDRNIDYESLA 238
            +++ A++ YPQAP SD+V +   +  +  ++FG V+R  +++   +   +R I+Y+SLA
Sbjct: 396 DYIANAMSKYPQAPGSDMVFLSRLMLERVEKMFGNVRRKGNQERDDVPSLERRINYKSLA 455

Query: 239 HGNLQETRHVFARIVFDTIYPL 260
            G+  ETR VFARIVFDTIYPL
Sbjct: 456 LGDFHETRRVFARIVFDTIYPL 477


>AT1G28090.1 | Symbols:  | Polynucleotide adenylyltransferase family
           protein | chr1:9795826-9798891 FORWARD LENGTH=541
          Length = 541

 Score =  229 bits (584), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 120/262 (45%), Positives = 168/262 (64%), Gaps = 8/262 (3%)

Query: 7   SLDYLTSLLLQ---DRLLMEINYMLAYGFGEASLRLLWKFGLLDILLPFQAAYFAHHGFQ 63
           S+  L+S LL+    R+ MEINYMLAYG  EASLRLLW+FGL++ILLP QA+Y    GF+
Sbjct: 279 SVKELSSSLLRLDPSRIRMEINYMLAYGSAEASLRLLWRFGLMEILLPIQASYLVSQGFR 338

Query: 64  RLDKRTNMXXXXXXXXXXXXAPNLPCHSSLWVGILALHKTLSDRPRDPLVVASFSLAVHN 123
           R D R+NM            AP+ PC   LW+GILA HK L D+PRDP VVASF LA+++
Sbjct: 339 RRDGRSNMLLSLFRNLDRLVAPDRPCSEFLWIGILAFHKALVDQPRDPTVVASFCLAIYS 398

Query: 124 GGNLLEAVNIARMISNPHYVRFPELLDPSGLDAKA---LEDETLELAESIQGTLLQMTDQ 180
             +L EA+ IAR  S  H   F EL  P    A +   +  + ++LAESI+    ++ ++
Sbjct: 399 EVSLSEAIAIARSNSKQHNSHFQELSSPEKDTADSESKISQQVIKLAESIRSAARKLNNR 458

Query: 181 YFVSKALADYPQAPHSDLVIIPLGLYRKTFRIFGCVKRSADKKF--LSKQDRNIDYESLA 238
            +++ A++ YPQAP SD+V +   +  +  ++FG V+R  +++   +   +R I+Y+SLA
Sbjct: 459 DYIANAMSKYPQAPGSDMVFLSRLMLERVEKMFGNVRRKGNQERDDVPSLERRINYKSLA 518

Query: 239 HGNLQETRHVFARIVFDTIYPL 260
            G+  ETR VFARIVFDTIYPL
Sbjct: 519 LGDFHETRRVFARIVFDTIYPL 540


>AT1G28090.2 | Symbols:  | Polynucleotide adenylyltransferase family
           protein | chr1:9796045-9798891 FORWARD LENGTH=505
          Length = 505

 Score =  229 bits (583), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 120/262 (45%), Positives = 168/262 (64%), Gaps = 8/262 (3%)

Query: 7   SLDYLTSLLLQ---DRLLMEINYMLAYGFGEASLRLLWKFGLLDILLPFQAAYFAHHGFQ 63
           S+  L+S LL+    R+ MEINYMLAYG  EASLRLLW+FGL++ILLP QA+Y    GF+
Sbjct: 243 SVKELSSSLLRLDPSRIRMEINYMLAYGSAEASLRLLWRFGLMEILLPIQASYLVSQGFR 302

Query: 64  RLDKRTNMXXXXXXXXXXXXAPNLPCHSSLWVGILALHKTLSDRPRDPLVVASFSLAVHN 123
           R D R+NM            AP+ PC   LW+GILA HK L D+PRDP VVASF LA+++
Sbjct: 303 RRDGRSNMLLSLFRNLDRLVAPDRPCSEFLWIGILAFHKALVDQPRDPTVVASFCLAIYS 362

Query: 124 GGNLLEAVNIARMISNPHYVRFPELLDPSGLDAKA---LEDETLELAESIQGTLLQMTDQ 180
             +L EA+ IAR  S  H   F EL  P    A +   +  + ++LAESI+    ++ ++
Sbjct: 363 EVSLSEAIAIARSNSKQHNSHFQELSSPEKDTADSESKISQQVIKLAESIRSAARKLNNR 422

Query: 181 YFVSKALADYPQAPHSDLVIIPLGLYRKTFRIFGCVKRSADKKF--LSKQDRNIDYESLA 238
            +++ A++ YPQAP SD+V +   +  +  ++FG V+R  +++   +   +R I+Y+SLA
Sbjct: 423 DYIANAMSKYPQAPGSDMVFLSRLMLERVEKMFGNVRRKGNQERDDVPSLERRINYKSLA 482

Query: 239 HGNLQETRHVFARIVFDTIYPL 260
            G+  ETR VFARIVFDTIYPL
Sbjct: 483 LGDFHETRRVFARIVFDTIYPL 504


>AT2G17580.1 | Symbols:  | Polynucleotide adenylyltransferase family
           protein | chr2:7646507-7650066 FORWARD LENGTH=757
          Length = 757

 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 119/249 (47%), Gaps = 14/249 (5%)

Query: 15  LLQDRLLMEINYMLAYGFGEASLRLLWKFGLLDILLPFQAAYFAHHGFQRLDKRTNMXXX 74
           L Q RL+ME+NYMLAYG    S+ LL KF LL +LLPFQAAY        L   + M   
Sbjct: 285 LDQFRLIMEMNYMLAYGAAAPSILLLMKFKLLHVLLPFQAAYLDQASKTSLSS-SLMLVR 343

Query: 75  XXXXXXXXXAPNLPCHSSLWVGILALHKTLSDRPRDPLVVASFSLAVHNGGNLLEAVNIA 134
                    + + P    LW+ +LA H  L   P++ +VV +F+  +++ GN  +AV  A
Sbjct: 344 LFSNMDKLVSCDQPADPKLWIAVLAFHIALVRNPQEAIVVRAFAALLYH-GNWSKAVEFA 402

Query: 135 RMISNPHYVRFPELLDPSGLDAKALEDETLELAES-----IQGTLLQMTDQYFVSKALAD 189
           R          PE+   S    +   DE L  A S     ++ T   +TD+  + +AL  
Sbjct: 403 REHETSVIGYAPEVSKSS----RKRSDEDLAEAVSEFTCLLKDTQYVLTDKEALREALYL 458

Query: 190 YPQAPHSDLVIIPLGLYRKTFRIFGCVKRSADKKFLS-KQDRNIDYESLAHGNLQETRHV 248
           YP    S LV IP    R      G ++ S  + + S K+  +IDY  L  GN  E R V
Sbjct: 459 YPDFKFSGLVFIPKKKGRDVAE--GFMRLSDVESYESQKEGFSIDYVLLGKGNPCEVRFV 516

Query: 249 FARIVFDTI 257
             +I+ DTI
Sbjct: 517 LGKIILDTI 525