Miyakogusa Predicted Gene
- Lj1g3v1452960.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1452960.1 tr|B8XJY5|B8XJY5_SOYBN Inducer of CBF expression
1 OS=Glycine max GN=ICE1 PE=2 SV=1,64.66,0,seg,NULL; helix loop helix
domain,Helix-loop-helix domain; coiled-coil,NULL; HLH,
helix-loop-helix D,CUFF.27335.1
(492 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 390 e-109
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 390 e-109
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 390 e-109
AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHL... 358 7e-99
AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-b... 135 9e-32
AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 132 5e-31
AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 121 1e-27
AT5G65640.2 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 87 3e-17
AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 79 6e-15
AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type tran... 77 2e-14
AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 77 4e-14
AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 74 2e-13
AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 74 2e-13
AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH) DNA-... 74 3e-13
AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 74 3e-13
AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 74 3e-13
AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 73 4e-13
AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 73 6e-13
AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 72 7e-13
AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 72 9e-13
AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 72 9e-13
AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 71 1e-12
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |... 70 2e-12
AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHL... 70 4e-12
AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 6e-12
AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 6e-12
AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 6e-12
AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 69 6e-12
AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29, ... 68 1e-11
AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHL... 68 2e-11
AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 68 2e-11
AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 | ch... 66 7e-11
AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 62 7e-10
AT1G10610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 62 9e-10
AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 61 2e-09
AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 61 2e-09
AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 60 3e-09
AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 59 5e-09
AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH) DNA-... 59 7e-09
AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH) DNA-b... 56 5e-08
AT4G21330.1 | Symbols: DYT1 | basic helix-loop-helix (bHLH) DNA-... 56 5e-08
AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 4e-07
AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 4e-07
AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 6e-07
AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA... 52 9e-07
AT1G06170.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 9e-07
AT1G06170.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 9e-07
AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 52 1e-06
AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 52 1e-06
AT1G72210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 51 1e-06
AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-l... 51 2e-06
AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-l... 51 2e-06
AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting fact... 51 2e-06
AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 51 2e-06
AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 51 2e-06
AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH) DNA-b... 51 2e-06
AT1G22490.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 51 2e-06
AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH) DNA-b... 51 2e-06
AT4G38070.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 3e-06
AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 5e-06
AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 8e-06
>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 390 bits (1003), Expect = e-109, Method: Compositional matrix adjust.
Identities = 249/512 (48%), Positives = 298/512 (58%), Gaps = 86/512 (16%)
Query: 23 SWARNSKPNSTGFVENRDDLGSLCALKPMLEVDEEWF-----------MMR---DMAF-- 66
SW RN + S+ F KPMLE D WF M++ D +
Sbjct: 27 SWGRNQEDGSSQF-------------KPMLEGD--WFSSNQPHPQDLQMLQNQPDFRYFG 71
Query: 67 -------DNVLLQTVDXXXXXXXXXXXXVFNTLEPSSSQYFLPPNPKPPTL---SSLLNP 116
DN+LLQ +L+PS FL N L S NP
Sbjct: 72 GFPFNPNDNLLLQHSIDSSSSCSPSQAF---SLDPSQQNQFLSTNNNKGCLLNVPSSANP 128
Query: 117 FD--------MGFLDPQGSTTSSLLGSFVELNNSKPQLTLPNFTSGTTMTMPHLPQSNTS 168
FD GFL+ + S GS +L N + ++P+F S ++ P +NT
Sbjct: 129 FDNAFEFGSESGFLNQIHAPISMGFGSLTQLGN-RDLSSVPDFLSARSLLAPESNNNNTM 187
Query: 169 F-GGFQNLEEASG-----KTPFL-NRSKILRPLESLPPSGAQPTLFQKRAALRKNMGSGS 221
GGF E G F+ NR+K+L+PLE L SGAQPTLFQKRAA+R++ GS
Sbjct: 188 LCGGFTAPLELEGFGSPANGGFVGNRAKVLKPLEVLASSGAQPTLFQKRAAMRQSSGSKM 247
Query: 222 SPVQSKGEIGEGSDKKRKLSIGDEYEDASFDGSGLNYDSDDLIESKMEEXXXXXXXXXXX 281
+S G R+ S + ++ + SGLNY+SD++ ES
Sbjct: 248 GNSESSG--------MRRFSDDGDMDETGIEVSGLNYESDEINESG-------------- 285
Query: 282 XXXXXXXXXXXXXXXXXXLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDA 341
+PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDA
Sbjct: 286 KAAESVQIGGGGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDA 345
Query: 342 IEYLKELLQRINDLHNELESTPNSGSCSLTPVSS-FHPLTPTPTALPGRIKEELCPSSLP 400
I+YLKELLQRINDLHNELESTP SL P SS FHPLTPTP L R+KEELCPSSLP
Sbjct: 346 IDYLKELLQRINDLHNELESTPPG---SLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLP 402
Query: 401 SPNGQPARVEVRLREGRAVNIHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNGFAMD 460
SP GQ ARVEVRLREGRAVNIHMFC R+PGLLL+TM+ALDNLGLD+QQAVISCFNGFA+D
Sbjct: 403 SPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALD 462
Query: 461 VFRAEQCNEGQEVHPEHIKAILLESAGFHGLI 492
VFRAEQC EGQE+ P+ IKA+L ++AG+ G+I
Sbjct: 463 VFRAEQCQEGQEILPDQIKAVLFDTAGYAGMI 494
>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 390 bits (1003), Expect = e-109, Method: Compositional matrix adjust.
Identities = 249/512 (48%), Positives = 298/512 (58%), Gaps = 86/512 (16%)
Query: 23 SWARNSKPNSTGFVENRDDLGSLCALKPMLEVDEEWF-----------MMR---DMAF-- 66
SW RN + S+ F KPMLE D WF M++ D +
Sbjct: 27 SWGRNQEDGSSQF-------------KPMLEGD--WFSSNQPHPQDLQMLQNQPDFRYFG 71
Query: 67 -------DNVLLQTVDXXXXXXXXXXXXVFNTLEPSSSQYFLPPNPKPPTL---SSLLNP 116
DN+LLQ +L+PS FL N L S NP
Sbjct: 72 GFPFNPNDNLLLQHSIDSSSSCSPSQAF---SLDPSQQNQFLSTNNNKGCLLNVPSSANP 128
Query: 117 FD--------MGFLDPQGSTTSSLLGSFVELNNSKPQLTLPNFTSGTTMTMPHLPQSNTS 168
FD GFL+ + S GS +L N + ++P+F S ++ P +NT
Sbjct: 129 FDNAFEFGSESGFLNQIHAPISMGFGSLTQLGN-RDLSSVPDFLSARSLLAPESNNNNTM 187
Query: 169 F-GGFQNLEEASG-----KTPFL-NRSKILRPLESLPPSGAQPTLFQKRAALRKNMGSGS 221
GGF E G F+ NR+K+L+PLE L SGAQPTLFQKRAA+R++ GS
Sbjct: 188 LCGGFTAPLELEGFGSPANGGFVGNRAKVLKPLEVLASSGAQPTLFQKRAAMRQSSGSKM 247
Query: 222 SPVQSKGEIGEGSDKKRKLSIGDEYEDASFDGSGLNYDSDDLIESKMEEXXXXXXXXXXX 281
+S G R+ S + ++ + SGLNY+SD++ ES
Sbjct: 248 GNSESSG--------MRRFSDDGDMDETGIEVSGLNYESDEINESG-------------- 285
Query: 282 XXXXXXXXXXXXXXXXXXLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDA 341
+PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDA
Sbjct: 286 KAAESVQIGGGGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDA 345
Query: 342 IEYLKELLQRINDLHNELESTPNSGSCSLTPVSS-FHPLTPTPTALPGRIKEELCPSSLP 400
I+YLKELLQRINDLHNELESTP SL P SS FHPLTPTP L R+KEELCPSSLP
Sbjct: 346 IDYLKELLQRINDLHNELESTPPG---SLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLP 402
Query: 401 SPNGQPARVEVRLREGRAVNIHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNGFAMD 460
SP GQ ARVEVRLREGRAVNIHMFC R+PGLLL+TM+ALDNLGLD+QQAVISCFNGFA+D
Sbjct: 403 SPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALD 462
Query: 461 VFRAEQCNEGQEVHPEHIKAILLESAGFHGLI 492
VFRAEQC EGQE+ P+ IKA+L ++AG+ G+I
Sbjct: 463 VFRAEQCQEGQEILPDQIKAVLFDTAGYAGMI 494
>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 390 bits (1003), Expect = e-109, Method: Compositional matrix adjust.
Identities = 249/512 (48%), Positives = 298/512 (58%), Gaps = 86/512 (16%)
Query: 23 SWARNSKPNSTGFVENRDDLGSLCALKPMLEVDEEWF-----------MMR---DMAF-- 66
SW RN + S+ F KPMLE D WF M++ D +
Sbjct: 27 SWGRNQEDGSSQF-------------KPMLEGD--WFSSNQPHPQDLQMLQNQPDFRYFG 71
Query: 67 -------DNVLLQTVDXXXXXXXXXXXXVFNTLEPSSSQYFLPPNPKPPTL---SSLLNP 116
DN+LLQ +L+PS FL N L S NP
Sbjct: 72 GFPFNPNDNLLLQHSIDSSSSCSPSQAF---SLDPSQQNQFLSTNNNKGCLLNVPSSANP 128
Query: 117 FD--------MGFLDPQGSTTSSLLGSFVELNNSKPQLTLPNFTSGTTMTMPHLPQSNTS 168
FD GFL+ + S GS +L N + ++P+F S ++ P +NT
Sbjct: 129 FDNAFEFGSESGFLNQIHAPISMGFGSLTQLGN-RDLSSVPDFLSARSLLAPESNNNNTM 187
Query: 169 F-GGFQNLEEASG-----KTPFL-NRSKILRPLESLPPSGAQPTLFQKRAALRKNMGSGS 221
GGF E G F+ NR+K+L+PLE L SGAQPTLFQKRAA+R++ GS
Sbjct: 188 LCGGFTAPLELEGFGSPANGGFVGNRAKVLKPLEVLASSGAQPTLFQKRAAMRQSSGSKM 247
Query: 222 SPVQSKGEIGEGSDKKRKLSIGDEYEDASFDGSGLNYDSDDLIESKMEEXXXXXXXXXXX 281
+S G R+ S + ++ + SGLNY+SD++ ES
Sbjct: 248 GNSESSG--------MRRFSDDGDMDETGIEVSGLNYESDEINESG-------------- 285
Query: 282 XXXXXXXXXXXXXXXXXXLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDA 341
+PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDA
Sbjct: 286 KAAESVQIGGGGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDA 345
Query: 342 IEYLKELLQRINDLHNELESTPNSGSCSLTPVSS-FHPLTPTPTALPGRIKEELCPSSLP 400
I+YLKELLQRINDLHNELESTP SL P SS FHPLTPTP L R+KEELCPSSLP
Sbjct: 346 IDYLKELLQRINDLHNELESTPPG---SLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLP 402
Query: 401 SPNGQPARVEVRLREGRAVNIHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNGFAMD 460
SP GQ ARVEVRLREGRAVNIHMFC R+PGLLL+TM+ALDNLGLD+QQAVISCFNGFA+D
Sbjct: 403 SPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALD 462
Query: 461 VFRAEQCNEGQEVHPEHIKAILLESAGFHGLI 492
VFRAEQC EGQE+ P+ IKA+L ++AG+ G+I
Sbjct: 463 VFRAEQCQEGQEILPDQIKAVLFDTAGYAGMI 494
>AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:4384758-4386392
FORWARD LENGTH=450
Length = 450
Score = 358 bits (918), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 212/383 (55%), Positives = 245/383 (63%), Gaps = 68/383 (17%)
Query: 117 FDMGFLDPQ--GSTTSSLLGSFVELNNSKPQLTLPNFTSGTTMTMPHLPQSNTSFGGFQN 174
FD GFL Q G+ S +F LN+S P LP S G
Sbjct: 129 FDSGFLGQQFHGNHQSPNSMNFTGLNHSVPDF---------------LPAPENSSG---- 169
Query: 175 LEEASGKTP-FLNRSKILRPLESLPPSGAQPTLFQKRAALRKNMGSGSSPVQSKGEIGEG 233
+ G +P F NR+K+L+PL+ + SG+QPTLFQKRAA+R++ S +S E+
Sbjct: 170 ---SCGLSPLFSNRAKVLKPLQVMASSGSQPTLFQKRAAMRQSSSSKMCNSESSSEM--- 223
Query: 234 SDKKRKLSIGDEYEDAS---FDGSGLNYDSDDLIESKMEEXXXXXXXXXXXXXXXXXXXX 290
RK S E +D S D SGLNY+SDD + +
Sbjct: 224 ----RKSSYEREIDDTSTGIIDISGLNYESDDHNTNNNKGKKKG---------------- 263
Query: 291 XXXXXXXXXLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQ 350
+PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAI+YLKELLQ
Sbjct: 264 ---------MPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQ 314
Query: 351 RINDLHNELESTPNSGSCSLTPVSSFHPLTPTPTALPGRIKEELCPSS-LPSPNGQPARV 409
RINDLH ELESTP S S S HPLTPTP L R+KEELCPSS LPSP GQ RV
Sbjct: 315 RINDLHTELESTPPSSS-------SLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRV 367
Query: 410 EVRLREGRAVNIHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNGFAMDVFRAEQCNE 469
EVRLREG+AVNIHMFC R+PGLLLSTMRALDNLGLD+QQAVISCFNGFA+DVFRAEQC E
Sbjct: 368 EVRLREGKAVNIHMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCQE 427
Query: 470 GQEVHPEHIKAILLESAGFHGLI 492
+V PE IKA+LL++AG+ GL+
Sbjct: 428 DHDVLPEQIKAVLLDTAGYAGLV 450
>AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:7331721-7334077
FORWARD LENGTH=571
Length = 571
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 111/193 (57%), Gaps = 11/193 (5%)
Query: 302 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELES 361
AKNLMAERRRRKKLNDRLY LRS+VP+I+K+DRASILGDAI Y+KEL +L +ELE
Sbjct: 313 AKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEE 372
Query: 362 TPNS--------GSCSL--TPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEV 411
+ G SL T V+ FHP + +P ++ +S +V+V
Sbjct: 373 NSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVDV 432
Query: 412 RLREGRAVNIHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNGFAMDVFRAEQCNEGQ 471
+GR + + C KPG M ALD+LGL++ A + + +VF+ E+ N+ +
Sbjct: 433 AQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVFKVEK-NDNE 491
Query: 472 EVHPEHIKAILLE 484
V EH++ LLE
Sbjct: 492 MVQAEHVRNSLLE 504
>AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238904 FORWARD LENGTH=351
Length = 351
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 120/194 (61%), Gaps = 25/194 (12%)
Query: 301 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELE 360
P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR SILGDAI+Y+KELL +IN L +E +
Sbjct: 176 PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEEQ 235
Query: 361 STPNSGSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVRLREGRAVN 420
NS +S H + L G +K+ ++ P P + E+ R+
Sbjct: 236 ELGNSN-------NSHH------SKLFGDLKD--LNANEPLVRNSP-KFEIDRRD-EDTR 278
Query: 421 IHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNGFAMDVFRAEQCNEGQE----VHPE 476
+ + C+ KPGLLLST+ L+ LGL+I+Q VISCF+ F++ C+EG E + E
Sbjct: 279 VDICCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDFSLQA----SCSEGAEQRDFITSE 334
Query: 477 HIKAILLESAGFHG 490
IK L +AG+ G
Sbjct: 335 DIKQALFRNAGYGG 348
>AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:3341357-3342877 FORWARD
LENGTH=315
Length = 315
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 112/193 (58%), Gaps = 32/193 (16%)
Query: 301 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLH-NEL 359
P+KNLMAERRRRK+LNDRL +LRS+VPKI+KMDR SILGDAI+Y+KELL +IN L +E
Sbjct: 149 PSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQ 208
Query: 360 ESTPNSGSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVRLREGRAV 419
E NS +L E + +SL + EV RE V
Sbjct: 209 ELGSNSHLSTLI------------------TNESMVRNSL--------KFEVDQRE---V 239
Query: 420 NIH--MFCARKPGLLLSTMRALDNLGLDIQQAVISCFNGFAMDVFRAEQCNEGQEVHPEH 477
N H + C KPGL++ST+ L+ LGL+I+Q VISCF+ F++ E + V E
Sbjct: 240 NTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVTSEA 299
Query: 478 IKAILLESAGFHG 490
K L+ +AG+ G
Sbjct: 300 TKQALIRNAGYGG 312
>AT5G65640.2 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238635 FORWARD LENGTH=290
Length = 290
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 57/67 (85%)
Query: 301 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELE 360
P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR SILGDAI+Y+KELL +IN L +E +
Sbjct: 176 PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEEQ 235
Query: 361 STPNSGS 367
NS +
Sbjct: 236 ELGNSNN 242
>AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154872 FORWARD
LENGTH=247
Length = 247
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Query: 302 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLH---NE 358
+KN+++ER RR+KLN RL+ LRSVVP I+KMD+ASI+ DAI Y++ L L E
Sbjct: 53 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 112
Query: 359 LESTPNSGSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVRLREGRA 418
LESTP S S S + L P + K + S + + ++V R
Sbjct: 113 LESTPKS-SLSFSKDFDRDLLVPVTSK-----KMKQLDSGSSTSLIEVLELKVTFMGERT 166
Query: 419 VNIHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNGFAMDVFRAEQCNEGQEV 473
+ + + C ++ ++ ++L L I + ++ F+G E E QEV
Sbjct: 167 MVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEEEQEV 221
>AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type
transcription factor | chr2:19091187-19092887 REVERSE
LENGTH=566
Length = 566
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 51/71 (71%)
Query: 301 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELE 360
P ++ AER+RR+KLN R Y LRSVVP ISKMD+AS+LGDAI Y+KEL +++ + +E
Sbjct: 393 PLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERV 452
Query: 361 STPNSGSCSLT 371
T S S S T
Sbjct: 453 GTDKSLSESNT 463
>AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr5:18974231-18976009 FORWARD
LENGTH=592
Length = 592
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 301 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELE 360
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++ ++ E
Sbjct: 413 PLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKE 472
Query: 361 STPNSGSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVRLREGRAVN 420
+ R KE + + + ++V++ G V
Sbjct: 473 EIQK-------KLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKII-GWDVM 524
Query: 421 IHMFCARK--PGLLLSTMRALDNLGLDIQQAVISCFN 455
I + C +K PG M AL L L++ A +S N
Sbjct: 525 IRVQCGKKDHPGARF--MEALKELDLEVNHASLSVVN 559
>AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23153293 FORWARD
LENGTH=226
Length = 226
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 9/158 (5%)
Query: 302 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLH---NE 358
+KN+++ER RR+KLN RL+ LRSVVP I+KMD+ASI+ DAI Y++ L L E
Sbjct: 54 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 359 LESTPNSGSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVRLREGRA 418
LESTP S S S + L P + K + S + + ++V R
Sbjct: 114 LESTPKS-SLSFSKDFDRDLLVPVTSK-----KMKQLDSGSSTSLIEVLELKVTFMGERT 167
Query: 419 VNIHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNG 456
+ + + C ++ ++ ++L L I + ++ F+G
Sbjct: 168 MVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSG 205
>AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154556 FORWARD
LENGTH=219
Length = 219
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 9/158 (5%)
Query: 302 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLH---NE 358
+KN+++ER RR+KLN RL+ LRSVVP I+KMD+ASI+ DAI Y++ L L E
Sbjct: 54 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 359 LESTPNSGSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVRLREGRA 418
LESTP S S S + L P + K + S + + ++V R
Sbjct: 114 LESTPKS-SLSFSKDFDRDLLVPVTSK-----KMKQLDSGSSTSLIEVLELKVTFMGERT 167
Query: 419 VNIHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNG 456
+ + + C ++ ++ ++L L I + ++ F+G
Sbjct: 168 MVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSG 205
>AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:23599809-23602734
FORWARD LENGTH=596
Length = 596
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 306 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELESTPNS 365
++E++RR+KLN+R LRS++P ISK+D+ SIL D IEYL++L +R+ +L + ES
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADT- 466
Query: 366 GSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARV-------EVRLRE-GR 417
+T + P A + + S + +PA + +R+ G
Sbjct: 467 -ETRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRISSLGN 525
Query: 418 AVNIHMFCARKPGLLLSTMRALDNLGLD 445
V I + CA + G+LL M + +L LD
Sbjct: 526 EVVIELRCAWREGILLEIMDVISDLNLD 553
>AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 306 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELESTPNS 365
++E++RR+KLN+R LRS++P ISK+D+ SIL D IEYL++L +R+ +L + ES
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADT- 466
Query: 366 GSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARV-------EVRLRE-GR 417
+T + P A + + S + +PA + +R+ G
Sbjct: 467 -ETRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRISSLGN 525
Query: 418 AVNIHMFCARKPGLLLSTMRALDNLGLD 445
V I + CA + G+LL M + +L LD
Sbjct: 526 EVVIELRCAWREGILLEIMDVISDLNLD 553
>AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 306 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELESTPNS 365
++E++RR+KLN+R LRS++P ISK+D+ SIL D IEYL++L +R+ +L + ES
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADT- 466
Query: 366 GSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARV-------EVRLRE-GR 417
+T + P A + + S + +PA + +R+ G
Sbjct: 467 -ETRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRISSLGN 525
Query: 418 AVNIHMFCARKPGLLLSTMRALDNLGLD 445
V I + CA + G+LL M + +L LD
Sbjct: 526 EVVIELRCAWREGILLEIMDVISDLNLD 553
>AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154801 FORWARD
LENGTH=264
Length = 264
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 9/158 (5%)
Query: 302 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLH---NE 358
+KN+++ER RR+KLN RL+ LRSVVP I+KMD+ASI+ DAI Y++ L L E
Sbjct: 54 SKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRE 113
Query: 359 LESTPNSGSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVRLREGRA 418
LESTP S S S + L P + K + S + + ++V R
Sbjct: 114 LESTPKS-SLSFSKDFDRDLLVPVTSK-----KMKQLDSGSSTSLIEVLELKVTFMGERT 167
Query: 419 VNIHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNG 456
+ + + C ++ ++ ++L L I + ++ F+G
Sbjct: 168 MVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSG 205
>AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=254
Length = 254
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
Query: 302 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELES 361
+KN+++ER RR+KLN RL+ LRSVVP ISK+D+AS++ D+I+Y++EL+ + L E+
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 362 TPNSGSCSLTPVSSF---------HPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVR 412
+ + PV + + + K+ + + + ++V
Sbjct: 113 LESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVT 172
Query: 413 LREGRAVNIHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNG 456
+ V + + C++K ++ + L++L L+I S F
Sbjct: 173 WMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTS 216
>AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr4:9933702-9935471 REVERSE LENGTH=589
Length = 589
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 20/190 (10%)
Query: 301 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELE 360
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++ ++ E
Sbjct: 414 PLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKE 473
Query: 361 STPNSGSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVRLR-EGRAV 419
+ +K+ C L + +EV ++ G
Sbjct: 474 ELQ----------KQIDVMNKEAGNAKSSVKDRKC---LNQESSVLIEMEVDVKIIGWDA 520
Query: 420 NIHMFCARK--PGLLLSTMRALDNLGLDIQQAVISCFNGFAMDVFRAEQCNEGQEVHPEH 477
I + C+++ PG M AL L L++ A +S N + + N Q +
Sbjct: 521 MIRIQCSKRNHPGAKF--MEALKELDLEVNHASLSVVNDLMIQQATVKMGN--QFFTQDQ 576
Query: 478 IKAILLESAG 487
+K L E G
Sbjct: 577 LKVALTEKVG 586
>AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645505 FORWARD
LENGTH=263
Length = 263
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
Query: 302 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELES 361
+KN+++ER RR+KLN RL+ LRSVVP ISK+D+AS++ D+I+Y++EL+ + L E+
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 362 TPNSGSCSLTPVSSF---------HPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVR 412
+ + PV + + + K+ + + + ++V
Sbjct: 113 LESRSTLLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVT 172
Query: 413 LREGRAVNIHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNG 456
+ V + + C++K ++ + L++L L+I S F
Sbjct: 173 WMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTS 216
>AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=225
Length = 225
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 20/155 (12%)
Query: 302 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELES 361
+KN+++ER RR+KLN RL+ LRSVVP ISK+D+AS++ D+I+Y++EL+ + L E+
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIR- 111
Query: 362 TPNSGSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVRLREGRAVNI 421
+ S L P R++ P + ++V + V +
Sbjct: 112 ----------ELESRSTLLENPMDYSTRVQH------YP---IEVLEMKVTWMGEKTVVV 152
Query: 422 HMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNG 456
+ C++K ++ + L++L L+I S F
Sbjct: 153 CITCSKKRETMVQLCKVLESLNLNILTTNFSSFTS 187
>AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645168 FORWARD
LENGTH=184
Length = 184
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 302 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELES 361
+KN+++ER RR+KLN RL+ LRSVVP ISK+D+AS++ D+I+Y++EL+ + L E+
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 362 TPNSGSCSLTPVSSF 376
+ + PV +
Sbjct: 113 LESRSTLLENPVRDY 127
>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
Basic helix-loop-helix (bHLH) DNA-binding family protein
| chr1:11799042-11800913 REVERSE LENGTH=623
Length = 623
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 301 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNE 358
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++ +E
Sbjct: 450 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESE 507
>AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:6182067-6186261
FORWARD LENGTH=518
Length = 518
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 32/142 (22%)
Query: 304 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELESTP 363
+++AERRRR+KLN++ LRS+VP ++KMD+ SILGD I Y+ L +R+++L N
Sbjct: 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELEN------ 417
Query: 364 NSGSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVRLREGRAVNIHM 423
T H T T + EE VEV + E V + M
Sbjct: 418 -------THHEQQHKRTRT---CKRKTSEE---------------VEVSIIEN-DVLLEM 451
Query: 424 FCARKPGLLLSTMRALDNLGLD 445
C + GLLL ++ L LG++
Sbjct: 452 RCEYRDGLLLDILQVLHELGIE 473
>AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 304 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELE 360
++ AER+RR+KLN R Y LRSVVP ISKMD+AS+LGDA+ Y+ EL ++ + E E
Sbjct: 434 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERE 490
>AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 304 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELE 360
++ AER+RR+KLN R Y LRSVVP ISKMD+AS+LGDA+ Y+ EL ++ + E E
Sbjct: 434 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERE 490
>AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 43/57 (75%)
Query: 304 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELE 360
++ AER+RR+KLN R Y LRSVVP ISKMD+AS+LGDA+ Y+ EL ++ + E E
Sbjct: 434 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERE 490
>AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:362230-363639 REVERSE
LENGTH=423
Length = 423
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 46/57 (80%)
Query: 304 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELE 360
++ AE++RR+KLN R Y LR++VPK+S+MD+AS+L DA+ Y++ L +I+DL E++
Sbjct: 250 HVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIK 306
>AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29,
ATFIT1 | FER-like regulator of iron uptake |
chr2:12004713-12005908 FORWARD LENGTH=318
Length = 318
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 302 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELES 361
++ L++ERRRR ++ D+LY LRS+VP I+KMD+ASI+GDA+ Y++EL + L +++
Sbjct: 130 SRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAG 189
Query: 362 TPNSGSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVRLREGRAVNI 421
SL + P K + P + + +++V E + +
Sbjct: 190 L----EASLNSTGGYQEHAPDAQ------KTQPFRGINPPASKKIIQMDVIQVEEKGFYV 239
Query: 422 HMFCARKPGLLLSTMRALDNL 442
+ C + G+ S ++L++L
Sbjct: 240 RLVCNKGEGVAPSLYKSLESL 260
>AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:16529457-16532866
FORWARD LENGTH=637
Length = 637
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 308 ERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELESTPNSGS 367
E++RR+KLN+R LR ++P I+K+D+ SIL D IEYL+EL +R+ +L + EST
Sbjct: 446 EKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCRESTDTETR 505
Query: 368 CSLT-----PVSSFHPLTP----TPTALPGRIKEELCPSSLPSPNGQPARVE-VRLRE-G 416
++T P + + T ++ + P+ G + +R+ G
Sbjct: 506 GTMTMKRKKPCDAGERTSANCANNETGNGKKVSVNNVGEAEPADTGFTGLTDNLRIGSFG 565
Query: 417 RAVNIHMFCARKPGLLLSTMRALDNLGLD 445
V I + CA + G+LL M + +L LD
Sbjct: 566 NEVVIELRCAWREGVLLEIMDVISDLHLD 594
>AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:9267599-9269002 FORWARD
LENGTH=467
Length = 467
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 304 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELESTP 363
++ AER+RR+KLN R Y LR+VVP ISKMD+AS+L DAI Y+ ++ ++I E +
Sbjct: 321 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETEKQIMK 380
Query: 364 NSGSCSLTP 372
S +TP
Sbjct: 381 RRESNQITP 389
>AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 |
chr5:19002719-19004254 FORWARD LENGTH=511
Length = 511
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 301 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELE 360
P ++ AER RR+KLN R Y LR+VVP +SKMD+ S+L DA+ Y+ EL + ++ E
Sbjct: 341 PLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEKH 400
Query: 361 STPNSGSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVRLREG--RA 418
+ + + A+P K E S + ++EV++ E
Sbjct: 401 AIE-------IQFNELKEIAGQRNAIPSVCKYEEKASEM-------MKIEVKIMESDDAM 446
Query: 419 VNIHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFN 455
V + PG L M AL +L L++ A IS N
Sbjct: 447 VRVESRKDHHPGARL--MNALMDLELEVNHASISVMN 481
>AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9678012-9679165 FORWARD
LENGTH=295
Length = 295
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 83/163 (50%), Gaps = 11/163 (6%)
Query: 300 LPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNEL 359
L ++++AER+RR+KL+++ L +++P + K D+ +IL DAI +K+L +++ L E
Sbjct: 116 LAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEK 175
Query: 360 ESTPNSGSCSLTPVSS-FHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVRLREGRA 418
E+T S L S F P + P E +LP + ++ ++ +R
Sbjct: 176 EATRQMESMILVKKSKVFFDEEPNLSCSPSVHIE--FDQALPEIEAKISQNDILIR---- 229
Query: 419 VNIHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNGFAMDV 461
+ C + G +++ + ++N L I+ +++ F +D+
Sbjct: 230 ----ILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDI 268
>AT1G10610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:3506463-3508752 FORWARD
LENGTH=441
Length = 441
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 44/61 (72%)
Query: 300 LPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNEL 359
+KNL +ER+RR+++N +Y LR+VVPKI+K+++ I DA++Y+ ELL L +EL
Sbjct: 261 FKSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDEL 320
Query: 360 E 360
+
Sbjct: 321 K 321
>AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=305
Length = 305
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 304 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNE----- 358
+++AER+RR+KL R L +++P + KMD+AS+LGDAI+++K L + + + +
Sbjct: 127 HILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKT 186
Query: 359 LESTPNSGSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVRLREGRA 418
+ES SL + P + + + P +EVR+ G+
Sbjct: 187 MESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLP-----------EIEVRV-SGKD 234
Query: 419 VNIHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNGFAMDVFRAEQCN 468
V I + C ++ G ++ M ++ LGL I + + F G D+ Q N
Sbjct: 235 VLIKILCEKQKGNVIKIMGEIEKLGLSITNSNVLPF-GPTFDISIIAQKN 283
>AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=304
Length = 304
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 304 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNE----- 358
+++AER+RR+KL R L +++P + KMD+AS+LGDAI+++K L + + + +
Sbjct: 127 HILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKT 186
Query: 359 LESTPNSGSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVRLREGRA 418
+ES SL + P + + + P +EVR+ G+
Sbjct: 187 MESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLP-----------EIEVRV-SGKD 234
Query: 419 VNIHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNGFAMDVFRAEQCN 468
V I + C ++ G ++ M ++ LGL I + + F G D+ Q N
Sbjct: 235 VLIKILCEKQKGNVIKIMGEIEKLGLSITNSNVLPF-GPTFDISIIAQNN 283
>AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17796362-17797647 REVERSE
LENGTH=328
Length = 328
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 304 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELESTP 363
+++AER+RR+KL R L ++VP + KMD+AS+LGDA++++K L +R+ +L E +
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGEL-EEQKKER 211
Query: 364 NSGSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVRLREGRAVNIHM 423
S L S L + ++ LP +EVR + V I +
Sbjct: 212 RLESMVLVKKSKL-ILDDNNQSFSSSCEDGFSDLDLP-------EIEVRFSD-EDVLIKI 262
Query: 424 FCARKPGLLLSTMRALDNLGLDIQQAVISCFNGFAMDV 461
C ++ G L M ++ L + I + + F G +D+
Sbjct: 263 LCEKQKGHLAKIMAEIEKLHILITNSSVLNF-GPTLDI 299
>AT2G31220.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:13303014-13304661 FORWARD
LENGTH=458
Length = 458
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 80/195 (41%), Gaps = 19/195 (9%)
Query: 307 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELES----- 361
ER RR NDR + L++++P +K+DRASI+G+AI+Y+KELL+ I + +E
Sbjct: 251 TERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIEEFKMLVEKKRCGR 310
Query: 362 ------------TPNSGSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARV 409
++ P + + + S + V
Sbjct: 311 FRSKKRARVGEGGGGEDQEEEEDTVNYKPQSEVDQSCFNKNNNNSLRCSWLKRKSKVTEV 370
Query: 410 EVRLREGRAVNIHMFCARKPGLLLSTMRALDNLGLDIQQAVISCFNGFAMDVFRAEQCNE 469
+VR+ + V I + +K LL T + LD L LD+ +F + C E
Sbjct: 371 DVRIIDDE-VTIKLVQKKKINCLLFTTKVLDQLQLDLHHVAGGQIGEHYSFLFNTKIC-E 428
Query: 470 GQEVHPEHIKAILLE 484
G V+ I L+E
Sbjct: 429 GSCVYASGIADTLME 443
>AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:9684858-9686321
FORWARD LENGTH=320
Length = 320
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 45/59 (76%)
Query: 300 LPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNE 358
L ++++AER+RR+KLN+RL L +++P + K D+A++L DAI++LK+L +R+ L E
Sbjct: 129 LLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEE 187
>AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr3:8715525-8717772
REVERSE LENGTH=414
Length = 414
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 85/174 (48%), Gaps = 23/174 (13%)
Query: 304 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIEYLKELLQRINDLHNE--- 358
++ ER RRK++N+ L +LRS++P + + D+ASI+G AIE+++EL Q + L ++
Sbjct: 199 HIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRR 258
Query: 359 --LESTPNSGSCSLTPVSSFHPLTPT---PTALPGRIKEELCPSSLPSPNGQP----ARV 409
L T + + T SS P + G + E L + A V
Sbjct: 259 RILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGGGGLREETAENKSCLADV 318
Query: 410 EVRLREGRAVNIHMFCARKPGLLLSTMRALDNLGLDI--------QQAVISCFN 455
EV+L G I + R+PG L+ T+ AL++L L I +Q V+ FN
Sbjct: 319 EVKLL-GFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLYSFN 371
>AT4G21330.1 | Symbols: DYT1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:11349922-11350694
FORWARD LENGTH=207
Length = 207
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 304 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDL---HNELE 360
NL AERRRR+KL+ RL LRS VP ++ M +ASI+ DAI Y+ EL + +L +E+E
Sbjct: 33 NLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLETFHEME 92
Query: 361 STP 363
P
Sbjct: 93 EAP 95
>AT4G28790.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14219887 FORWARD
LENGTH=340
Length = 340
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%)
Query: 306 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLH 356
++ERRRR+K+N+ + L+ ++P+ +K DR+S+L D IEY+K L +I H
Sbjct: 284 LSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQGKH 334
>AT4G28815.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14228719-14230288 FORWARD
LENGTH=307
Length = 307
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 306 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDL 355
+AERRRR+K+N+R+ L+ ++P+ +K + S+L D IEY+K L +IN
Sbjct: 157 LAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQINQF 206
>AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14221970-14224075 FORWARD
LENGTH=445
Length = 445
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 36/50 (72%)
Query: 306 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDL 355
+AERRRR+K+N+++ L+ ++P+ +K + S L DAIEY+K L +I +
Sbjct: 262 LAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGM 311
>AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17863-19848
FORWARD LENGTH=399
Length = 399
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 35/47 (74%)
Query: 307 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRIN 353
+ER+RR K+N R+ L+ +VP SK D+AS+L + IEYLK+L +++
Sbjct: 221 SERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVS 267
>AT1G06170.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1885146-1886564 REVERSE
LENGTH=420
Length = 420
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 307 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDL 355
ER RR DR L++++P +K DRASI+G+AI+Y+KELL+ I++
Sbjct: 220 TERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRTIDEF 268
>AT1G06170.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1885146-1886564 REVERSE
LENGTH=420
Length = 420
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 307 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDL 355
ER RR DR L++++P +K DRASI+G+AI+Y+KELL+ I++
Sbjct: 220 TERERRVHFKDRFGDLKNLIPNPTKNDRASIVGEAIDYIKELLRTIDEF 268
>AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 35/43 (81%)
Query: 306 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKEL 348
++ERRRR ++N+++ L+ ++P +K+D+AS+L +AIEYLK L
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSL 392
>AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 35/43 (81%)
Query: 306 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKEL 348
++ERRRR ++N+++ L+ ++P +K+D+AS+L +AIEYLK L
Sbjct: 350 LSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSL 392
>AT1G72210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:27180066-27182268 FORWARD
LENGTH=320
Length = 320
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 13/150 (8%)
Query: 304 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIEYLKELLQRINDLHNELES 361
++ ER RRK++N+ L +LRS++P + D+ASI+G AI YLKEL + + +++
Sbjct: 127 HIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSMEPPVKT 186
Query: 362 -TPNSGS----CSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVRLREG 416
T ++G+ T SS P + A P P+S + G A +EV + E
Sbjct: 187 ATEDTGAGHDQTKTTSASSSGPFSDF-FAFPQYSNR---PTSAAAAEGM-AEIEVTMVES 241
Query: 417 RAVNIHMFCARKPGLLLSTMRALDNLGLDI 446
A ++ + ++P LL + ++ +L L +
Sbjct: 242 HA-SLKILAKKRPRQLLKLVSSIQSLRLTL 270
>AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704276-8706538 REVERSE LENGTH=478
Length = 478
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 37/47 (78%)
Query: 306 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRI 352
++ER+RR ++N+R+ L+ ++P+ +K D+AS+L +AIEY+K L +I
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQI 337
>AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704525-8706538 REVERSE LENGTH=478
Length = 478
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 37/47 (78%)
Query: 306 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRI 352
++ER+RR ++N+R+ L+ ++P+ +K D+AS+L +AIEY+K L +I
Sbjct: 291 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQI 337
>AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting factor
3-like 5 | chr2:8704525-8706237 REVERSE LENGTH=407
Length = 407
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 37/47 (78%)
Query: 306 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRI 352
++ER+RR ++N+R+ L+ ++P+ +K D+AS+L +AIEY+K L +I
Sbjct: 220 LSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQI 266
>AT4G28790.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14218329-14220173 FORWARD
LENGTH=413
Length = 413
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 36/48 (75%)
Query: 306 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRIN 353
++ERRRR+K+N+ + L+ ++P+ +K DR+S+L D IEY+K L +I
Sbjct: 284 LSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQ 331
>AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:13296655-13298139 FORWARD
LENGTH=428
Length = 428
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 303 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDL 355
K ER RR LN+R L+ ++P SK DRASIL D I+Y+ EL +R+++L
Sbjct: 214 KPFTTERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSEL 266
>AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17414167-17415945
FORWARD LENGTH=373
Length = 373
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 36/43 (83%)
Query: 306 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKEL 348
++E+RRR ++N+++ L+S++P +K D+AS+L +AIEYLK+L
Sbjct: 204 LSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQL 246
>AT1G22490.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:7938448-7940489 REVERSE
LENGTH=304
Length = 304
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 18/151 (11%)
Query: 304 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIEYLKELLQRINDLHNELES 361
++ ER RRK++N+ L +LRS++P + D+ASI+G AI Y+KEL + + +
Sbjct: 117 HIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPKRTR 176
Query: 362 TPN------SGSCSLTPVSSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVRLRE 415
T + S S + P + F T S +P + PA +EV + E
Sbjct: 177 THDPKGDKTSTSSLVGPFTDFFSFPQYSTK---------SSSDVPESSSSPAEIEVTVAE 227
Query: 416 GRAVNIHMFCARKPGLLLSTMRALDNLGLDI 446
A NI + +KP LL + +L +L L +
Sbjct: 228 SHA-NIKIMTKKKPRQLLKLITSLQSLRLTL 257
>AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:26785332-26786338
REVERSE LENGTH=210
Length = 210
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 38/50 (76%)
Query: 306 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDL 355
++E++RR K+N+++ L+ ++P +K D+AS+L +AIEYLK+L ++ L
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>AT4G38070.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17876535-17882569 FORWARD
LENGTH=1513
Length = 1513
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 307 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDL 355
AERRRR ++N + LR+++P + K D+AS+LG+ + Y EL + + D+
Sbjct: 1356 AERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKMVQDI 1404
>AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:7507720-7508841 FORWARD
LENGTH=373
Length = 373
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 306 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHN---ELEST 362
+A R+RR+++++++ +L+++VP +KMD AS+L +A YLK L ++ L N +L+ T
Sbjct: 282 VAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQT 341
Query: 363 PNSGSCSLTPVSSFHPLTPTPTALPGRIKEELC 395
S S + T FHP + P P +I C
Sbjct: 342 NLSFSSAPTSFPLFHP-SFLPLQNPNQIHHPEC 373
>AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:19239694-19242373 FORWARD
LENGTH=371
Length = 371
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 304 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIEYLKELLQRINDLHNELES 361
++ ER RR+++N L LRS++P I + D+ASI+G AI+++K L Q++ L + S
Sbjct: 195 HIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQKRS 254
Query: 362 TPNSGSCSLTPV-SSFHPLTPTPTALPGRIKEELCPSSLPSPNGQPARVEVRLREGRAVN 420
+ + P +S + + L KEE ++E + E VN
Sbjct: 255 QQSDDNKEQIPEDNSLRNI--SSNKLRASNKEE---------QSSKLKIEATVIESH-VN 302
Query: 421 IHMFCARKPGLLLSTMRALDNLGLDIQQAVIS----CFNGFAMDVFRAEQCNEG 470
+ + C RK G LL ++ L+ L + I+ ++ ++ ++CN G
Sbjct: 303 LKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMEDECNLG 356