Miyakogusa Predicted Gene
- Lj1g3v1452940.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1452940.2 Non Chatacterized Hit- tr|I1JXQ2|I1JXQ2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,93.87,0,FAMILY NOT
NAMED,NULL; Auxin_resp,Auxin response factor; B3,B3 DNA binding
domain; no description,DN,CUFF.27337.2
(370 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 602 e-172
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 602 e-172
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin respons... 602 e-172
AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 | chr5:249... 600 e-172
AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 436 e-123
AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 436 e-123
AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 436 e-123
AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 | chr1:219... 436 e-122
AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 394 e-110
AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 | chr4:124... 392 e-109
AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 | chr3:2... 387 e-108
AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 379 e-105
AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 378 e-105
AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 | chr2:1... 332 2e-91
AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 | chr5:243... 332 3e-91
AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 | chr1:1... 330 6e-91
AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 | chr1:1... 323 1e-88
AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 | chr1:1... 320 8e-88
AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 | chr1:1... 317 1e-86
AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 | chr1:1... 314 5e-86
AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 | chr1:1... 313 2e-85
AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 311 5e-85
AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 fam... 310 1e-84
AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor ... 307 9e-84
AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 305 2e-83
AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 304 6e-83
AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 | chr1:106... 304 6e-83
AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 | chr5:146... 302 3e-82
AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 | ... 301 3e-82
AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response fact... 301 4e-82
AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23... 301 6e-82
AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | Tran... 301 7e-82
AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 273 1e-73
AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 | chr1:1... 273 1e-73
AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 | chr2:1... 215 4e-56
AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 | chr4:1... 204 6e-53
AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 | chr1:2... 168 5e-42
AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 | chr1:1... 164 1e-40
AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor... 59 5e-09
AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor... 58 1e-08
AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor... 57 2e-08
AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor... 54 2e-07
AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 | chr1... 52 6e-07
AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding fact... 50 2e-06
AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor fam... 50 2e-06
AT1G25560.1 | Symbols: TEM1, EDF1 | AP2/B3 transcription factor ... 50 3e-06
AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor fam... 50 4e-06
AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 | ch... 48 1e-05
AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | relate... 48 1e-05
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 602 bits (1552), Expect = e-172, Method: Compositional matrix adjust.
Identities = 285/355 (80%), Positives = 309/355 (87%)
Query: 1 MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHVH 60
MP+YDLPSK+LCRVINV LKAE DTDEV+AQ+TLLPE NQDENA+EKE RF VH
Sbjct: 103 MPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVH 162
Query: 61 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFRG 120
SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMS+QPPTQEL AKDLH NEWRFRHIFRG
Sbjct: 163 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRG 222
Query: 121 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHSM 180
QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP SVISSHSM
Sbjct: 223 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 282
Query: 181 HLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGEE 240
HLGVLATAWHAI TGT+FTVYYKPRTSP+EFIVP+DQYMES+K NY++GMRFKMRFEGEE
Sbjct: 283 HLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEE 342
Query: 241 APEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXXXXXXXXX 300
APEQRFTGT+VGIE+ D W S+WR LKVRWDETS+ PRPDRVSPWK+E
Sbjct: 343 APEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALS 402
Query: 301 XXXXXRPKRPRSIAVLSSPDSSVLTREASSKVSVDPLPANGFPRVLQGQEFSTLR 355
RPKRPRS SSPDSS+LTRE ++K ++DPLPA+G RVLQGQE+STLR
Sbjct: 403 PVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLR 457
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 602 bits (1552), Expect = e-172, Method: Compositional matrix adjust.
Identities = 285/355 (80%), Positives = 309/355 (87%)
Query: 1 MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHVH 60
MP+YDLPSK+LCRVINV LKAE DTDEV+AQ+TLLPE NQDENA+EKE RF VH
Sbjct: 103 MPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVH 162
Query: 61 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFRG 120
SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMS+QPPTQEL AKDLH NEWRFRHIFRG
Sbjct: 163 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRG 222
Query: 121 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHSM 180
QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP SVISSHSM
Sbjct: 223 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 282
Query: 181 HLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGEE 240
HLGVLATAWHAI TGT+FTVYYKPRTSP+EFIVP+DQYMES+K NY++GMRFKMRFEGEE
Sbjct: 283 HLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEE 342
Query: 241 APEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXXXXXXXXX 300
APEQRFTGT+VGIE+ D W S+WR LKVRWDETS+ PRPDRVSPWK+E
Sbjct: 343 APEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALS 402
Query: 301 XXXXXRPKRPRSIAVLSSPDSSVLTREASSKVSVDPLPANGFPRVLQGQEFSTLR 355
RPKRPRS SSPDSS+LTRE ++K ++DPLPA+G RVLQGQE+STLR
Sbjct: 403 PVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLR 457
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response
factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Length = 859
Score = 602 bits (1552), Expect = e-172, Method: Compositional matrix adjust.
Identities = 285/355 (80%), Positives = 309/355 (87%)
Query: 1 MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHVH 60
MP+YDLPSK+LCRVINV LKAE DTDEV+AQ+TLLPE NQDENA+EKE RF VH
Sbjct: 103 MPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVH 162
Query: 61 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFRG 120
SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMS+QPPTQEL AKDLH NEWRFRHIFRG
Sbjct: 163 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRG 222
Query: 121 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHSM 180
QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP SVISSHSM
Sbjct: 223 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 282
Query: 181 HLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGEE 240
HLGVLATAWHAI TGT+FTVYYKPRTSP+EFIVP+DQYMES+K NY++GMRFKMRFEGEE
Sbjct: 283 HLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEE 342
Query: 241 APEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXXXXXXXXX 300
APEQRFTGT+VGIE+ D W S+WR LKVRWDETS+ PRPDRVSPWK+E
Sbjct: 343 APEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALS 402
Query: 301 XXXXXRPKRPRSIAVLSSPDSSVLTREASSKVSVDPLPANGFPRVLQGQEFSTLR 355
RPKRPRS SSPDSS+LTRE ++K ++DPLPA+G RVLQGQE+STLR
Sbjct: 403 PVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLR 457
>AT5G62000.4 | Symbols: ARF2 | auxin response factor 2 |
chr5:24910859-24914873 FORWARD LENGTH=853
Length = 853
Score = 600 bits (1548), Expect = e-172, Method: Compositional matrix adjust.
Identities = 285/355 (80%), Positives = 309/355 (87%)
Query: 1 MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHVH 60
MP+YDLPSK+LCRVINV LKAE DTDEV+AQ+TLLPE NQDENA+EKE RF VH
Sbjct: 103 MPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVH 162
Query: 61 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFRG 120
SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMS+QPPTQEL AKDLH NEWRFRHIFRG
Sbjct: 163 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRG 222
Query: 121 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHSM 180
QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP SVISSHSM
Sbjct: 223 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 282
Query: 181 HLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGEE 240
HLGVLATAWHAI TGT+FTVYYKPRTSP+EFIVP+DQYMES+K NY++GMRFKMRFEGEE
Sbjct: 283 HLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEE 342
Query: 241 APEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXXXXXXXXX 300
APEQRFTGT+VGIE+ D W S+WR LKVRWDETS+ PRPDRVSPWK+E
Sbjct: 343 APEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALS 402
Query: 301 XXXXXRPKRPRSIAVLSSPDSSVLTREASSKVSVDPLPANGFPRVLQGQEFSTLR 355
RPKRPRS SSPDSS+LTRE ++K ++DPLPA+G RVLQGQE+STLR
Sbjct: 403 PVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQGQEYSTLR 457
>AT1G59750.4 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=660
Length = 660
Score = 436 bits (1122), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/291 (70%), Positives = 243/291 (83%), Gaps = 1/291 (0%)
Query: 1 MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHVH 60
MP ++LPSKILC+VIN+Q +AEP+TDEV+AQ+TLLPE +Q E + + VH
Sbjct: 64 MPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSE-PTSPDAPVQEPEKCTVH 122
Query: 61 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFRG 120
SFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDMS+QPP QEL A DLH +EW FRHIFRG
Sbjct: 123 SFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRG 182
Query: 121 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHSM 180
QPRRHLL +GWSVFVSSK+LVAGDAFIFLRGEN ELRVGVRR MRQQ N+P SVISSHSM
Sbjct: 183 QPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSM 242
Query: 181 HLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGEE 240
H+GVLATA HAI TGTIF+V+YKPRTS +EFIV ++Y+E+ +VGMRFKMRFEGEE
Sbjct: 243 HIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEE 302
Query: 241 APEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIE 291
APE+RF+GT+VG+++ S W DS WR LKV+WDE S+ RP+RVSPW++E
Sbjct: 303 APEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELE 353
>AT1G59750.3 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 436 bits (1122), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/291 (70%), Positives = 243/291 (83%), Gaps = 1/291 (0%)
Query: 1 MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHVH 60
MP ++LPSKILC+VIN+Q +AEP+TDEV+AQ+TLLPE +Q E + + VH
Sbjct: 64 MPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSE-PTSPDAPVQEPEKCTVH 122
Query: 61 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFRG 120
SFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDMS+QPP QEL A DLH +EW FRHIFRG
Sbjct: 123 SFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRG 182
Query: 121 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHSM 180
QPRRHLL +GWSVFVSSK+LVAGDAFIFLRGEN ELRVGVRR MRQQ N+P SVISSHSM
Sbjct: 183 QPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSM 242
Query: 181 HLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGEE 240
H+GVLATA HAI TGTIF+V+YKPRTS +EFIV ++Y+E+ +VGMRFKMRFEGEE
Sbjct: 243 HIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEE 302
Query: 241 APEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIE 291
APE+RF+GT+VG+++ S W DS WR LKV+WDE S+ RP+RVSPW++E
Sbjct: 303 APEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELE 353
>AT1G59750.1 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=665
Length = 665
Score = 436 bits (1122), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/291 (70%), Positives = 243/291 (83%), Gaps = 1/291 (0%)
Query: 1 MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHVH 60
MP ++LPSKILC+VIN+Q +AEP+TDEV+AQ+TLLPE +Q E + + VH
Sbjct: 64 MPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSE-PTSPDAPVQEPEKCTVH 122
Query: 61 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFRG 120
SFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDMS+QPP QEL A DLH +EW FRHIFRG
Sbjct: 123 SFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRG 182
Query: 121 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHSM 180
QPRRHLL +GWSVFVSSK+LVAGDAFIFLRGEN ELRVGVRR MRQQ N+P SVISSHSM
Sbjct: 183 QPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSM 242
Query: 181 HLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGEE 240
H+GVLATA HAI TGTIF+V+YKPRTS +EFIV ++Y+E+ +VGMRFKMRFEGEE
Sbjct: 243 HIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEE 302
Query: 241 APEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIE 291
APE+RF+GT+VG+++ S W DS WR LKV+WDE S+ RP+RVSPW++E
Sbjct: 303 APEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELE 353
>AT1G59750.2 | Symbols: ARF1 | auxin response factor 1 |
chr1:21980414-21984193 FORWARD LENGTH=662
Length = 662
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/291 (70%), Positives = 243/291 (83%), Gaps = 1/291 (0%)
Query: 1 MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHVH 60
MP ++LPSKILC+VIN+Q +AEP+TDEV+AQ+TLLPE +Q E + + VH
Sbjct: 64 MPSFNLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSE-PTSPDAPVQEPEKCTVH 122
Query: 61 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFRG 120
SFCKTLTASDTSTHGGFSVLRRHAD+CLPPLDMS+QPP QEL A DLH +EW FRHIFRG
Sbjct: 123 SFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRG 182
Query: 121 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHSM 180
QPRRHLL +GWSVFVSSK+LVAGDAFIFLRGEN ELRVGVRR MRQQ N+P SVISSHSM
Sbjct: 183 QPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSM 242
Query: 181 HLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGEE 240
H+GVLATA HAI TGTIF+V+YKPRTS +EFIV ++Y+E+ +VGMRFKMRFEGEE
Sbjct: 243 HIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEE 302
Query: 241 APEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIE 291
APE+RF+GT+VG+++ S W DS WR LKV+WDE S+ RP+RVSPW++E
Sbjct: 303 APEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELE 353
>AT4G23980.1 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=638
Length = 638
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/335 (57%), Positives = 250/335 (74%), Gaps = 3/335 (0%)
Query: 2 PVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHVHS 61
P++ LP KILC V+NV L+AE DTDEV+AQ+TL+P + + + + R VHS
Sbjct: 56 PLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHS 115
Query: 62 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFRGQ 121
F K LTASDTSTHGGFSVLR+HA ECLPPLDM++Q PTQEL A+D+HG +W+F+HIFRGQ
Sbjct: 116 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQ 175
Query: 122 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHSMH 181
PRRHLL +GWS FV+SKRLVAGD F+FLRGENGELRVGVRRA QQ ++P SVISSHSMH
Sbjct: 176 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMH 235
Query: 182 LGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGEEA 241
LGVLATA HA T T+F VYYKPRTS +FI+ ++Y+E++ ++VGMRFKMRFEGE++
Sbjct: 236 LGVLATARHATQTKTMFIVYYKPRTS--QFIISLNKYLEAMSNKFSVGMRFKMRFEGEDS 293
Query: 242 PEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXXXXXXXXXX 301
PE+R++GTV+G++D S W+DS+WRCL+V WDE ++ RP++VSPW+IE
Sbjct: 294 PERRYSGTVIGVKDC-SPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPK 352
Query: 302 XXXXRPKRPRSIAVLSSPDSSVLTREASSKVSVDP 336
+ KRPR ++ +S+ D + S V P
Sbjct: 353 SVMLKNKRPRQVSEVSALDVGITASNLWSSVLTQP 387
>AT4G23980.2 | Symbols: ARF9 | auxin response factor 9 |
chr4:12451592-12454737 FORWARD LENGTH=636
Length = 636
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/317 (59%), Positives = 245/317 (77%), Gaps = 3/317 (0%)
Query: 2 PVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHVHS 61
P++ LP KILC V+NV L+AE DTDEV+AQ+TL+P + + + + R VHS
Sbjct: 56 PLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHS 115
Query: 62 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFRGQ 121
F K LTASDTSTHGGFSVLR+HA ECLPPLDM++Q PTQEL A+D+HG +W+F+HIFRGQ
Sbjct: 116 FSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQ 175
Query: 122 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHSMH 181
PRRHLL +GWS FV+SKRLVAGD F+FLRGENGELRVGVRRA QQ ++P SVISSHSMH
Sbjct: 176 PRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMH 235
Query: 182 LGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGEEA 241
LGVLATA HA T T+F VYYKPRTS +FI+ ++Y+E++ ++VGMRFKMRFEGE++
Sbjct: 236 LGVLATARHATQTKTMFIVYYKPRTS--QFIISLNKYLEAMSNKFSVGMRFKMRFEGEDS 293
Query: 242 PEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXXXXXXXXXX 301
PE+R++GTV+G++D S W+DS+WRCL+V WDE ++ RP++VSPW+IE
Sbjct: 294 PERRYSGTVIGVKDC-SPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPK 352
Query: 302 XXXXRPKRPRSIAVLSS 318
+ KRPR ++ +S+
Sbjct: 353 SVMLKNKRPRQVSEVSA 369
>AT3G61830.1 | Symbols: ARF18 | auxin response factor 18 |
chr3:22888171-22891179 FORWARD LENGTH=602
Length = 602
Score = 387 bits (993), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/292 (64%), Positives = 230/292 (78%), Gaps = 6/292 (2%)
Query: 1 MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDE-NAVEKEXXXXXXXRFHV 59
+PV+DLP KILCRV++V LKAE +TDEV+AQ+TL PE +Q E +++ FH
Sbjct: 68 IPVFDLPPKILCRVLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVGPTKQEFH- 126
Query: 60 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFR 119
SF K LTASDTSTHGGFSVLR+HA ECLP LDM++ PTQEL +DLHG EWRF+HIFR
Sbjct: 127 -SFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFR 185
Query: 120 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHS 179
GQPRRHLL +GWS FVSSKRLVAGDAF+FLRGENG+LRVGVRR R Q +P SVISS S
Sbjct: 186 GQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQS 245
Query: 180 MHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGE 239
MHLGVLATA HA+ T TIF V+YKPR S +FIV ++YME++K +++G RF+MRFEGE
Sbjct: 246 MHLGVLATASHAVRTTTIFVVFYKPRIS--QFIVGVNKYMEAIKHGFSLGTRFRMRFEGE 303
Query: 240 EAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIE 291
E+PE+ FTGT+VG D+ S+ W S+WR L+V+WDE + RPD+VSPW+IE
Sbjct: 304 ESPERIFTGTIVGSGDLSSQ-WPASKWRSLQVQWDEPTTVQRPDKVSPWEIE 354
>AT2G46530.1 | Symbols: ARF11 | auxin response factor 11 |
chr2:19104993-19108029 FORWARD LENGTH=601
Length = 601
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/291 (61%), Positives = 229/291 (78%), Gaps = 4/291 (1%)
Query: 1 MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHVH 60
+PV++LP KILCRV++V LKAE +TDEV+AQ+TL PE +Q E + + V
Sbjct: 64 IPVFNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSE-PTSLDPPLVEPAKPTVD 122
Query: 61 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFRG 120
SF K LTASDTSTHGGFSVLR+HA ECLP LDM++ PTQEL A+DLHG EWRF+HIFRG
Sbjct: 123 SFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRG 182
Query: 121 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHSM 180
QPRRHLL +GWS FV+SKRLVAGDAF+FLRGE G+LRVGVRR +QQ +P SVISS SM
Sbjct: 183 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSM 242
Query: 181 HLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGEE 240
LGVLATA HA+ T TIF V+YKPR S +FI+ ++YM ++K +++GMR++MRFEGEE
Sbjct: 243 RLGVLATASHAVTTTTIFVVFYKPRIS--QFIISVNKYMMAMKNGFSLGMRYRMRFEGEE 300
Query: 241 APEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIE 291
+PE+ FTGT++G D+ S+ W S+WR L+++WDE S+ RP++VSPW+IE
Sbjct: 301 SPERIFTGTIIGSGDLSSQ-WPASKWRSLQIQWDEPSSIQRPNKVSPWEIE 350
>AT2G46530.3 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105112-19108029 FORWARD LENGTH=622
Length = 622
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/291 (61%), Positives = 229/291 (78%), Gaps = 4/291 (1%)
Query: 1 MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHVH 60
+PV++LP KILCRV++V LKAE +TDEV+AQ+TL PE +Q E + + V
Sbjct: 85 IPVFNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSE-PTSLDPPLVEPAKPTVD 143
Query: 61 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFRG 120
SF K LTASDTSTHGGFSVLR+HA ECLP LDM++ PTQEL A+DLHG EWRF+HIFRG
Sbjct: 144 SFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRG 203
Query: 121 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHSM 180
QPRRHLL +GWS FV+SKRLVAGDAF+FLRGE G+LRVGVRR +QQ +P SVISS SM
Sbjct: 204 QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSM 263
Query: 181 HLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGEE 240
LGVLATA HA+ T TIF V+YKPR S +FI+ ++YM ++K +++GMR++MRFEGEE
Sbjct: 264 RLGVLATASHAVTTTTIFVVFYKPRIS--QFIISVNKYMMAMKNGFSLGMRYRMRFEGEE 321
Query: 241 APEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIE 291
+PE+ FTGT++G D+ S+ W S+WR L+++WDE S+ RP++VSPW+IE
Sbjct: 322 SPERIFTGTIIGSGDLSSQ-WPASKWRSLQIQWDEPSSIQRPNKVSPWEIE 371
>AT2G46530.2 | Symbols: ARF11 | auxin response factor 11 |
chr2:19105511-19108029 FORWARD LENGTH=514
Length = 514
Score = 332 bits (851), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 153/233 (65%), Positives = 191/233 (81%), Gaps = 3/233 (1%)
Query: 59 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIF 118
V SF K LTASDTSTHGGFSVLR+HA ECLP LDM++ PTQEL A+DLHG EWRF+HIF
Sbjct: 34 VDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIF 93
Query: 119 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSH 178
RGQPRRHLL +GWS FV+SKRLVAGDAF+FLRGE G+LRVGVRR +QQ +P SVISS
Sbjct: 94 RGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQ 153
Query: 179 SMHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEG 238
SM LGVLATA HA+ T TIF V+YKPR S +FI+ ++YM ++K +++GMR++MRFEG
Sbjct: 154 SMRLGVLATASHAVTTTTIFVVFYKPRIS--QFIISVNKYMMAMKNGFSLGMRYRMRFEG 211
Query: 239 EEAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIE 291
EE+PE+ FTGT++G D+ S+ W S+WR L+++WDE S+ RP++VSPW+IE
Sbjct: 212 EESPERIFTGTIIGSGDLSSQ-WPASKWRSLQIQWDEPSSIQRPNKVSPWEIE 263
>AT5G60450.1 | Symbols: ARF4 | auxin response factor 4 |
chr5:24308558-24312187 REVERSE LENGTH=788
Length = 788
Score = 332 bits (850), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 170/363 (46%), Positives = 234/363 (64%), Gaps = 20/363 (5%)
Query: 1 MPVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLP----------EPNQDENAVEKEXX 50
+P +DL +I+CRV+NVQL A DTDEV+ QVTLLP E E+E
Sbjct: 106 IPKFDLNPQIVCRVVNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERN 165
Query: 51 XXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGN 110
+ H FCKTLTASDTSTHGGFSV RR A++C PLD +Q P+QEL AKDLHG
Sbjct: 166 GSSSVKRTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGV 225
Query: 111 EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNV 170
EW+FRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLR E GELR+G+RRA R + +
Sbjct: 226 EWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGL 285
Query: 171 PPSVISSHSMHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGM 230
P S+I +S +L+ +A+ T ++F V+Y PR + AEF++PY++Y+ S+++ +G
Sbjct: 286 PDSIIEKNSCS-NILSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRSPVCIGT 344
Query: 231 RFKMRFEGEEAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKI 290
RF+MRFE +++PE+R G V G+ D+D W +S+WRCL VRWDE+ + +RVSPW+I
Sbjct: 345 RFRMRFEMDDSPERRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEI 404
Query: 291 EXXXXXXXXXXXXXXRPKRPRSIAVLSSPDSSVLTREAS---SKVSVDPLPANGFPRVLQ 347
+ RPKRP + + ++P + +T+ + SV P +VLQ
Sbjct: 405 DPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPITKRGGFLDFEESVRP------SKVLQ 458
Query: 348 GQE 350
GQE
Sbjct: 459 GQE 461
>AT1G35540.1 | Symbols: ARF14 | auxin response factor 14 |
chr1:13108634-13111700 FORWARD LENGTH=605
Length = 605
Score = 330 bits (847), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 161/329 (48%), Positives = 219/329 (66%), Gaps = 19/329 (5%)
Query: 2 PVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPE------PNQDENAVEKEXXXXXXX 55
P+ D PSK+ CRVI +QLK E ++DE +A++TL+P+ P Q++N
Sbjct: 70 PICDFPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNQNQF---------- 119
Query: 56 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFR 115
R V+SF K LTASDTS HGGFSV ++HA ECLPPLDMS+ PTQE+ A DLHGN+WRFR
Sbjct: 120 RPLVNSFTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFR 179
Query: 116 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVI 175
HI+RG +RHLL GW+ F +SK+LV GD +F+RGE GELRVG+RRA QQGN+P S++
Sbjct: 180 HIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIV 239
Query: 176 SSHSMHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMR 235
S SM G++A+A HA +F V YKPR+S +FIV YD++++ + + VG RF MR
Sbjct: 240 SIESMRHGIIASAKHAFDNQCMFIVVYKPRSS--QFIVSYDKFLDVVNNKFNVGSRFTMR 297
Query: 236 FEGEEAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXXXX 295
FEG++ E+R GT++G+ D S W+ S WR L+V+WDE ++ PRP++VSPW IE
Sbjct: 298 FEGDDFSERRSFGTIIGVSDF-SPHWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLTP 356
Query: 296 XXXXXXXXXXRPKRPRSIAVLSSPDSSVL 324
+ KR R + + S S +L
Sbjct: 357 WSNVSRSSFLKNKRSREVNEIGSSSSHLL 385
>AT1G34410.1 | Symbols: ARF21 | auxin response factor 21 |
chr1:12577722-12580824 FORWARD LENGTH=606
Length = 606
Score = 323 bits (828), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/331 (48%), Positives = 219/331 (66%), Gaps = 23/331 (6%)
Query: 2 PVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPE------PNQDENAVEKEXXXXXXX 55
P+ DLPSK+ CRVI + LK E ++DE++A++TL+P+ P Q EN
Sbjct: 70 PICDLPSKLQCRVIAIHLKVENNSDEIYAEITLMPDTTQVVIPTQSEN------------ 117
Query: 56 RFH--VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWR 113
RF V+SF K LTASDTS +GGFSV ++HA ECLPPLDMS+ P QE+ A DLH N+WR
Sbjct: 118 RFRPLVNSFTKVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWR 177
Query: 114 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPS 173
FRH +RG P+RH L +GW+ F++SK+LV GD +F+RGE GELRVG+RRA QQGN+P S
Sbjct: 178 FRHNYRGTPQRHSLTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSS 237
Query: 174 VISSHSMHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFK 233
++S M GV+A+A HA IF V YKPR+S +FIV YD++++++ + VG RF
Sbjct: 238 IVSIDCMRHGVIASAKHAFDNQCIFIVVYKPRSS--QFIVSYDKFLDAVNNKFNVGSRFT 295
Query: 234 MRFEGEEAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXX 293
MRFEG++ E+R+ GT++G+ D S W+ S WR L+V+WDE ++ RP++VSPW+IE
Sbjct: 296 MRFEGDDFSERRYFGTIIGVSDF-SPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHL 354
Query: 294 XXXXXXXXXXXXRPKRPRSIAVLSSPDSSVL 324
+ KR R + S S +L
Sbjct: 355 VPALNVPRSSLLKNKRLREVNEFGSSSSHLL 385
>AT1G34310.1 | Symbols: ARF12 | auxin response factor 12 |
chr1:12508548-12511520 REVERSE LENGTH=593
Length = 593
Score = 320 bits (821), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 159/329 (48%), Positives = 215/329 (65%), Gaps = 19/329 (5%)
Query: 2 PVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPE------PNQDENAVEKEXXXXXXX 55
P+ DLPSK+ CRVI + LK E ++DE +A++TL+P+ P Q+EN
Sbjct: 70 PICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQNENQF---------- 119
Query: 56 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFR 115
R V+SF K LTASDTS HGGF V ++HA ECLP LDMS+ P QEL A DLHGN+WRF
Sbjct: 120 RPLVNSFTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFN 179
Query: 116 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVI 175
H +RG P+RHLL +GW+ F +SK+LVAGD +F+RGE GELRVG+RRA QQGN+P S++
Sbjct: 180 HNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIV 239
Query: 176 SSHSMHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMR 235
S M GV+A+A HA +FTV YKPR+S +FIV YD++++++ + VG RF MR
Sbjct: 240 SIDCMRHGVVASAKHAFDNQCMFTVVYKPRSS--KFIVSYDKFLDAVNNKFNVGSRFTMR 297
Query: 236 FEGEEAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXXXX 295
EG++ E+R GT++G+ D S W+ S WR L+V+WDE ++ P P +VSPW IE
Sbjct: 298 LEGDDFSERRCFGTIIGVSDF-SPHWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHLMP 356
Query: 296 XXXXXXXXXXRPKRPRSIAVLSSPDSSVL 324
+ KR R + + S S +L
Sbjct: 357 AINVPRSFLLKNKRLREVNEIGSSSSHLL 385
>AT1G35520.1 | Symbols: ARF15 | auxin response factor 15 |
chr1:13082819-13085830 REVERSE LENGTH=598
Length = 598
Score = 317 bits (811), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 155/324 (47%), Positives = 214/324 (66%), Gaps = 4/324 (1%)
Query: 2 PVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDEN-AVEKEXXXXXXXRFHVH 60
P+ DLPSK+ CRVI + LK E ++DE +A++TL+P+ EN V R V+
Sbjct: 70 PICDLPSKLQCRVIAIHLKVENNSDETYAKITLMPDTTVSENLQVVIPTQNENQFRPLVN 129
Query: 61 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFRG 120
SF K LTASD S +G FSV ++HA ECLPPLDMS+ P QEL A DLHGN+W FRH +RG
Sbjct: 130 SFTKVLTASDISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRG 189
Query: 121 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHSM 180
P+RHLL +GW+ F +SK+LV GD +F+RGE GELRVG+RRA QQGN+P S++S M
Sbjct: 190 TPQRHLLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCM 249
Query: 181 HLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGEE 240
GV+A+A HA +F V YKPR+S +FIV YD++++++ + VG RF MRFEG++
Sbjct: 250 RHGVIASAKHAFDNQCMFIVVYKPRSS--QFIVSYDKFLDAVNNKFNVGSRFTMRFEGDD 307
Query: 241 APEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXXXXXXXXX 300
E+R+ GT++G+ + S W+ S WR L+V+WDE ++ RP++VSPW+IE
Sbjct: 308 LSERRYFGTIIGVSNF-SPHWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPALNVP 366
Query: 301 XXXXXRPKRPRSIAVLSSPDSSVL 324
+ KR R + S S +L
Sbjct: 367 RSSFLKNKRLREVNEFGSSSSHLL 390
>AT1G35240.1 | Symbols: ARF20 | auxin response factor 20 |
chr1:12927457-12930523 REVERSE LENGTH=590
Length = 590
Score = 314 bits (805), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 152/318 (47%), Positives = 209/318 (65%), Gaps = 21/318 (6%)
Query: 2 PVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPE------PNQDENAVEKEXXXXXXX 55
P+ DLPSK+ CRVI + LK E ++DE +A++TL+P+ P Q EN
Sbjct: 70 PICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQSENQF---------- 119
Query: 56 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFR 115
R V+SF K LTASDTS +GGF V ++HA ECLPPL + P QEL AKDLHGN+WRFR
Sbjct: 120 RPLVNSFTKVLTASDTSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFR 175
Query: 116 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVI 175
H +RG P+RH L +GW+ F +SK+LV GD +F+RGE GELRVG+RRA QQGN+P S++
Sbjct: 176 HSYRGTPQRHSLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIV 235
Query: 176 SSHSMHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMR 235
S M GV+A+A HA+ IF V YKP ++FIV YD++++++ + VG RF MR
Sbjct: 236 SIDCMRHGVIASAKHALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAMNNKFIVGSRFTMR 295
Query: 236 FEGEEAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXXXX 295
FEG++ E+R+ GT++G+ D S W+ S WR L+V+WDE ++ RP++VSPW+IE
Sbjct: 296 FEGDDFSERRYFGTIIGVNDF-SPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMS 354
Query: 296 XXXXXXXXXXRPKRPRSI 313
+ KR R +
Sbjct: 355 ALNVPRSSLLKNKRLREV 372
>AT1G34390.1 | Symbols: ARF22 | auxin response factor 22 |
chr1:12556005-12559082 FORWARD LENGTH=598
Length = 598
Score = 313 bits (801), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 163/329 (49%), Positives = 221/329 (67%), Gaps = 21/329 (6%)
Query: 2 PVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPE------PNQDENAVEKEXXXXXXX 55
P+ DLPSK+ CRVI +QLK E ++DE +A++TL+P+ P Q+EN
Sbjct: 70 PICDLPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNENQF---------- 119
Query: 56 RFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFR 115
R V+SF K LTASDTS GGF V ++HA ECLPPLDMS+ PTQEL A DLHGN+WRF
Sbjct: 120 RPLVNSFTKVLTASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFN 177
Query: 116 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVI 175
H +RG P+RHLL +GW+ F +SK+LVAGD +F+RGE GELRVG+RRA QQGN+P S+I
Sbjct: 178 HNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSII 237
Query: 176 SSHSMHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMR 235
S SM GV+A+A HA +F V YKPR+S +FIV YD++++++ + VG RF MR
Sbjct: 238 SIESMRHGVIASAKHAFDNQCMFIVVYKPRSS--QFIVSYDKFLDAVNNKFNVGSRFTMR 295
Query: 236 FEGEEAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXXXX 295
FEG++ E+R+ GT++G+ D S W+ S WR L+V+WDE ++ RP++VSPW+IE
Sbjct: 296 FEGDDFSERRYFGTIIGVSDF-SPHWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLMP 354
Query: 296 XXXXXXXXXXRPKRPRSIAVLSSPDSSVL 324
+ KR R + + S S +L
Sbjct: 355 ALNVPRPSLLKNKRLREVNEIGSSSSHLL 383
>AT1G34170.1 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=505
Length = 505
Score = 311 bits (797), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 159/375 (42%), Positives = 230/375 (61%), Gaps = 27/375 (7%)
Query: 2 PVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHVHS 61
P++DLPSK+ CRV+ + K + +TDEV+AQ++L+P D V R V+
Sbjct: 68 PIFDLPSKLRCRVVAIDRKVDKNTDEVYAQISLMP----DTTEVMTHNTTMDTRRPIVYF 123
Query: 62 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFRGQ 121
F K LTASD S GG + +++A EC PPLDMS+ TQ L AKDL+G EW F+H+FRG
Sbjct: 124 FSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGT 183
Query: 122 PRRHLLQSG--WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHS 179
P+RH+ SG WSVF ++KRL+ GD F+ LRGENGELR G+RRA QQG++P SVIS++
Sbjct: 184 PQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANC 243
Query: 180 MHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGE 239
M GV+A+ +A T +F V YKP +S +F++ YD++++++ NY VG RF+M+FEG+
Sbjct: 244 MQHGVIASVVNAFKTKCMFNVVYKPSSS--QFVISYDKFVDAMNNNYIVGSRFRMQFEGK 301
Query: 240 EAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXXXXXXXX 299
+ E+R+ GT++G+ D+ S W+DS WR LKV+WDE S RP++VSPW IE
Sbjct: 302 DFSEKRYDGTIIGVNDM-SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDI 360
Query: 300 XXXXXXRPKRPRSIAVLSSPDSSVLT------REASSKVSVDPLPANGFPRVLQGQEFST 353
+ K + + + S++ T R +S +SV P +P ++ +F
Sbjct: 361 SQSSLKKKKHWLQLNEIGATLSNLWTCQEIGQRSMNSPISV---PEFSYPNAIEDSKF-- 415
Query: 354 LRGNIARLRSLLLGH 368
L LLL H
Sbjct: 416 -------LSGLLLNH 423
>AT2G33860.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 family
protein / auxin-responsive factor AUX/IAA-related |
chr2:14325444-14328613 REVERSE LENGTH=608
Length = 608
Score = 310 bits (794), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 163/358 (45%), Positives = 218/358 (60%), Gaps = 13/358 (3%)
Query: 3 VYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEK--------EXXXXXX 54
+Y LP + CR+++V+L AE TDEV+AQV+LLPE E V + E
Sbjct: 91 IYGLPPHVFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVL 150
Query: 55 XRFHV-HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWR 113
R + H FCKTLTASDTSTHGGFSV RR A++C PPLD S+ P+QEL A+DLHG EWR
Sbjct: 151 KRSNTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWR 210
Query: 114 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPS 173
FRHI+RGQPRRHLL +GWS FV+ K+LV+GDA +FLRG++G+LR+GVRRA + +G S
Sbjct: 211 FRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALS 270
Query: 174 VISSHSMHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFK 233
+ +M+ + HAI T ++F++ Y P+ S + FI+P ++++ + + +GMRFK
Sbjct: 271 AQYNQNMNHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFK 330
Query: 234 MRFEGEEAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXX 293
R E E+A E+R G + GI D+D W S+WRCL VRWD+ RVSPW+IE
Sbjct: 331 ARVESEDASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPS 390
Query: 294 XXXXXXXXXXXXRPKRPRSIAVLSSPDSSVLTREASSKVSVDPLPANGFPRVLQGQEF 351
PKR R PD V + + D + F RVLQGQE
Sbjct: 391 GSISNSGSFVTTGPKRSRIGFSSGKPDIPV----SEGIRATDFEESLRFQRVLQGQEI 444
>AT1G19850.1 | Symbols: MP, ARF5, IAA24 | Transcriptional factor B3
family protein / auxin-responsive factor AUX/IAA-related
| chr1:6887353-6891182 FORWARD LENGTH=902
Length = 902
Score = 307 bits (786), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 152/293 (51%), Positives = 204/293 (69%), Gaps = 2/293 (0%)
Query: 1 MPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHV 59
+P Y +LPS+++C+V NV L A+ D+DE++AQ++L P ++ + + +
Sbjct: 96 VPNYPNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPT 155
Query: 60 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFR 119
FCKTLTASDTSTHGGFSV RR A++ PPLD S QPPTQEL +DLH N W FRHI+R
Sbjct: 156 EFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYR 215
Query: 120 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHS 179
GQP+RHLL +GWS+FV SKRL AGD+ +F+R E +L VGVRRA RQQ +P SV+S+ S
Sbjct: 216 GQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADS 275
Query: 180 MHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESL-KTNYTVGMRFKMRFEG 238
MH+GVLA A HA T F ++Y PR PAEF++P +Y +++ + +VGMRF M FE
Sbjct: 276 MHIGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFET 335
Query: 239 EEAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIE 291
E++ ++R+ GT+VGI D+D W S+WR L+V WDE +P RVSPW IE
Sbjct: 336 EDSGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
>AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1164
Length = 1164
Score = 305 bits (782), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/292 (53%), Positives = 204/292 (69%), Gaps = 1/292 (0%)
Query: 1 MPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHV 59
+P Y +LPSK++C + NV L A+P+TDEV+AQ+TL P D +A+ R
Sbjct: 65 IPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPN 124
Query: 60 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFR 119
FCKTLTASDTSTHGGFSV RR A++ P LD S QPP QEL AKD+H N W FRHI+R
Sbjct: 125 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYR 184
Query: 120 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHS 179
GQP+RHLL +GWSVFVS+KRL AGD+ +F+R +L +G+RRA RQQ + SVISS S
Sbjct: 185 GQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDS 244
Query: 180 MHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGE 239
MH+GVLA A HA + FT++Y PR +PAEF+VP +Y +++ ++GMRF+M FE E
Sbjct: 245 MHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETE 304
Query: 240 EAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIE 291
E +R+ GTV GI D+D W++S+WR L++ WDE++ RP RVS W IE
Sbjct: 305 ECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIE 356
>AT1G30330.2 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=935
Length = 935
Score = 304 bits (779), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHV 59
+P Y L +++C++ NV + A+ +TDEV+AQ+TL P Q++ R
Sbjct: 67 IPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPT 126
Query: 60 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFR 119
+ FCKTLTASDTSTHGGFSV RR A++ PPLD S+QPP QEL A+DLH NEW+FRHIFR
Sbjct: 127 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFR 186
Query: 120 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHS 179
GQP+RHLL +GWSVFVS+KRLVAGD+ +F+ + +L +G+RRA R Q +P SV+SS S
Sbjct: 187 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDS 246
Query: 180 MHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESL-KTNYTVGMRFKMRFEG 238
MHLG+LA A HA T + FT++Y PR SP+EF++P +Y++++ T +VGMRF+M FE
Sbjct: 247 MHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFET 306
Query: 239 EEAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXXXXXXX 298
EE+ +R+ GT+ GI D+D W +S WR +KV WDE++ R RVS W+IE
Sbjct: 307 EESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 366
Query: 299 XXXXXXXRPKRP 310
R KRP
Sbjct: 367 YPSPFPLRLKRP 378
>AT1G30330.1 | Symbols: ARF6 | auxin response factor 6 |
chr1:10686125-10690036 REVERSE LENGTH=933
Length = 933
Score = 304 bits (778), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 157/312 (50%), Positives = 212/312 (67%), Gaps = 2/312 (0%)
Query: 1 MPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHV 59
+P Y L +++C++ NV + A+ +TDEV+AQ+TL P Q++ R
Sbjct: 65 IPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPT 124
Query: 60 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFR 119
+ FCKTLTASDTSTHGGFSV RR A++ PPLD S+QPP QEL A+DLH NEW+FRHIFR
Sbjct: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFR 184
Query: 120 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHS 179
GQP+RHLL +GWSVFVS+KRLVAGD+ +F+ + +L +G+RRA R Q +P SV+SS S
Sbjct: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDS 244
Query: 180 MHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESL-KTNYTVGMRFKMRFEG 238
MHLG+LA A HA T + FT++Y PR SP+EF++P +Y++++ T +VGMRF+M FE
Sbjct: 245 MHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFET 304
Query: 239 EEAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXXXXXXX 298
EE+ +R+ GT+ GI D+D W +S WR +KV WDE++ R RVS W+IE
Sbjct: 305 EESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364
Query: 299 XXXXXXXRPKRP 310
R KRP
Sbjct: 365 YPSPFPLRLKRP 376
>AT5G37020.2 | Symbols: ARF8 | auxin response factor 8 |
chr5:14630151-14633916 FORWARD LENGTH=773
Length = 773
Score = 302 bits (773), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 158/322 (49%), Positives = 213/322 (66%), Gaps = 2/322 (0%)
Query: 1 MPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHV 59
+P Y LP +++C++ NV + A+ +TDEV+AQ+TL P +++ +
Sbjct: 64 IPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPS 123
Query: 60 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFR 119
+ FCKTLTASDTSTHGGFSV RR A++ PPLD + QPP QEL A+DLH EW+FRHIFR
Sbjct: 124 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFR 183
Query: 120 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHS 179
GQP+RHLL +GWSVFVS+KRLVAGD+ IF+R E +L +G+R A R Q VP SV+SS S
Sbjct: 184 GQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDS 243
Query: 180 MHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESL-KTNYTVGMRFKMRFEG 238
MH+G+LA A HA T + FTV++ PR S +EF++ +Y++++ T +VGMRF+M FE
Sbjct: 244 MHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFET 303
Query: 239 EEAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXXXXXXX 298
EE+ +R+ GT+ GI D+DS W +S WR +KV WDE++ R RVS W+IE
Sbjct: 304 EESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 363
Query: 299 XXXXXXXRPKRPRSIAVLSSPD 320
R KRP S PD
Sbjct: 364 YPSLFPLRLKRPWHAGTSSLPD 385
>AT5G37020.1 | Symbols: ARF8, ATARF8 | auxin response factor 8 |
chr5:14630151-14634106 FORWARD LENGTH=811
Length = 811
Score = 301 bits (772), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 158/322 (49%), Positives = 213/322 (66%), Gaps = 2/322 (0%)
Query: 1 MPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHV 59
+P Y LP +++C++ NV + A+ +TDEV+AQ+TL P +++ +
Sbjct: 64 IPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPS 123
Query: 60 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFR 119
+ FCKTLTASDTSTHGGFSV RR A++ PPLD + QPP QEL A+DLH EW+FRHIFR
Sbjct: 124 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFR 183
Query: 120 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHS 179
GQP+RHLL +GWSVFVS+KRLVAGD+ IF+R E +L +G+R A R Q VP SV+SS S
Sbjct: 184 GQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDS 243
Query: 180 MHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESL-KTNYTVGMRFKMRFEG 238
MH+G+LA A HA T + FTV++ PR S +EF++ +Y++++ T +VGMRF+M FE
Sbjct: 244 MHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFET 303
Query: 239 EEAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXXXXXXX 298
EE+ +R+ GT+ GI D+DS W +S WR +KV WDE++ R RVS W+IE
Sbjct: 304 EESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 363
Query: 299 XXXXXXXRPKRPRSIAVLSSPD 320
R KRP S PD
Sbjct: 364 YPSLFPLRLKRPWHAGTSSLPD 385
>AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | auxin response factor
19 | chr1:6628395-6632779 REVERSE LENGTH=1086
Length = 1086
Score = 301 bits (771), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 207/312 (66%), Gaps = 1/312 (0%)
Query: 1 MPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHV 59
+P Y +LPSK++C + +V L A+ +TDEV+AQ+TL P D A+ R
Sbjct: 64 IPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDMGLKLNRQPT 123
Query: 60 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFR 119
FCKTLTASDTSTHGGFSV RR A++ PPLD S QPP QE+ AKDLH W FRHI+R
Sbjct: 124 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYR 183
Query: 120 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHS 179
GQP+RHLL +GWSVFVS+KRL AGD+ +F+R E +L +G+RRA RQ + SVISS S
Sbjct: 184 GQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDS 243
Query: 180 MHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGE 239
MH+G+LA A HA + FT+++ PR SP+EF+VP +Y ++L ++GMRF+M FE E
Sbjct: 244 MHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETE 303
Query: 240 EAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXXXXXXXX 299
+ +R+ GTV GI D+D W+ S+WR L+V WDE++ RP RVS W+IE
Sbjct: 304 DCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITPFYI 363
Query: 300 XXXXXXRPKRPR 311
RPK PR
Sbjct: 364 CPPPFFRPKYPR 375
>AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP, IAA23,
IAA25 | Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1150
Length = 1150
Score = 301 bits (770), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 156/293 (53%), Positives = 204/293 (69%), Gaps = 2/293 (0%)
Query: 1 MPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHV 59
+P Y +LPSK++C + NV L A+P+TDEV+AQ+TL P D +A+ R
Sbjct: 65 IPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPN 124
Query: 60 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFR 119
FCKTLTASDTSTHGGFSV RR A++ P LD S QPP QEL AKD+H N W FRHI+R
Sbjct: 125 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYR 184
Query: 120 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHS 179
GQP+RHLL +GWSVFVS+KRL AGD+ +F+R +L +G+RRA RQQ + SVISS S
Sbjct: 185 GQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDS 244
Query: 180 MHLGVLATAWHAILTGTIFTVYYKPR-TSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEG 238
MH+GVLA A HA + FT++Y PR +PAEF+VP +Y +++ ++GMRF+M FE
Sbjct: 245 MHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFET 304
Query: 239 EEAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIE 291
EE +R+ GTV GI D+D W++S+WR L++ WDE++ RP RVS W IE
Sbjct: 305 EECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIE 357
>AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP |
Transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related |
chr5:7016704-7021504 REVERSE LENGTH=1165
Length = 1165
Score = 301 bits (770), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 156/293 (53%), Positives = 204/293 (69%), Gaps = 2/293 (0%)
Query: 1 MPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHV 59
+P Y +LPSK++C + NV L A+P+TDEV+AQ+TL P D +A+ R
Sbjct: 65 IPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDMGLKLNRQPN 124
Query: 60 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFR 119
FCKTLTASDTSTHGGFSV RR A++ P LD S QPP QEL AKD+H N W FRHI+R
Sbjct: 125 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYR 184
Query: 120 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHS 179
GQP+RHLL +GWSVFVS+KRL AGD+ +F+R +L +G+RRA RQQ + SVISS S
Sbjct: 185 GQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDS 244
Query: 180 MHLGVLATAWHAILTGTIFTVYYKPR-TSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEG 238
MH+GVLA A HA + FT++Y PR +PAEF+VP +Y +++ ++GMRF+M FE
Sbjct: 245 MHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFET 304
Query: 239 EEAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIE 291
EE +R+ GTV GI D+D W++S+WR L++ WDE++ RP RVS W IE
Sbjct: 305 EECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIE 357
>AT1G34170.2 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12444265-12446764 REVERSE LENGTH=479
Length = 479
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 210/375 (56%), Gaps = 53/375 (14%)
Query: 2 PVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHVHS 61
P++DLPSK+ CRV+ + K + +TDEV+AQ++L+P D V R V+
Sbjct: 68 PIFDLPSKLRCRVVAIDRKVDKNTDEVYAQISLMP----DTTEVMTHNTTMDTRRPIVYF 123
Query: 62 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFRGQ 121
F K LTASD S GG + +++A EC PPLDMS+ TQ L AKDL+G EW F+H+FRG
Sbjct: 124 FSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGT 183
Query: 122 PRRHLLQSG--WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHS 179
P+RH+ SG WSVF ++KRL+ GD F+ LRGENGELR G+RRA QQG++P SVIS++
Sbjct: 184 PQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANC 243
Query: 180 MHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGE 239
M GV+A+ +A T +F V YKPR M+FEG+
Sbjct: 244 MQHGVIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGK 275
Query: 240 EAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXXXXXXXX 299
+ E+R+ GT++G+ D+ S W+DS WR LKV+WDE S RP++VSPW IE
Sbjct: 276 DFSEKRYDGTIIGVNDM-SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDI 334
Query: 300 XXXXXXRPKRPRSIAVLSSPDSSVLT------REASSKVSVDPLPANGFPRVLQGQEFST 353
+ K + + + S++ T R +S +SV P +P ++ +F
Sbjct: 335 SQSSLKKKKHWLQLNEIGATLSNLWTCQEIGQRSMNSPISV---PEFSYPNAIEDSKF-- 389
Query: 354 LRGNIARLRSLLLGH 368
L LLL H
Sbjct: 390 -------LSGLLLNH 397
>AT1G34170.3 | Symbols: ARF13 | AUXIN RESPONSE FACTOR 13 |
chr1:12443578-12446764 REVERSE LENGTH=546
Length = 546
Score = 273 bits (698), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 210/375 (56%), Gaps = 53/375 (14%)
Query: 2 PVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHVHS 61
P++DLPSK+ CRV+ + K + +TDEV+AQ++L+P D V R V+
Sbjct: 68 PIFDLPSKLRCRVVAIDRKVDKNTDEVYAQISLMP----DTTEVMTHNTTMDTRRPIVYF 123
Query: 62 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFRGQ 121
F K LTASD S GG + +++A EC PPLDMS+ TQ L AKDL+G EW F+H+FRG
Sbjct: 124 FSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGT 183
Query: 122 PRRHLLQSG--WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPPSVISSHS 179
P+RH+ SG WSVF ++KRL+ GD F+ LRGENGELR G+RRA QQG++P SVIS++
Sbjct: 184 PQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANC 243
Query: 180 MHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGE 239
M GV+A+ +A T +F V YKPR M+FEG+
Sbjct: 244 MQHGVIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGK 275
Query: 240 EAPEQRFTGTVVGIEDVDSKSWRDSRWRCLKVRWDETSNTPRPDRVSPWKIEXXXXXXXX 299
+ E+R+ GT++G+ D+ S W+DS WR LKV+WDE S RP++VSPW IE
Sbjct: 276 DFSEKRYDGTIIGVNDM-SPHWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDI 334
Query: 300 XXXXXXRPKRPRSIAVLSSPDSSVLT------REASSKVSVDPLPANGFPRVLQGQEFST 353
+ K + + + S++ T R +S +SV P +P ++ +F
Sbjct: 335 SQSSLKKKKHWLQLNEIGATLSNLWTCQEIGQRSMNSPISV---PEFSYPNAIEDSKF-- 389
Query: 354 LRGNIARLRSLLLGH 368
L LLL H
Sbjct: 390 -------LSGLLLNH 397
>AT2G28350.1 | Symbols: ARF10 | auxin response factor 10 |
chr2:12114331-12116665 FORWARD LENGTH=693
Length = 693
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/331 (38%), Positives = 172/331 (51%), Gaps = 45/331 (13%)
Query: 6 LPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQD----ENAV----EKEXXXXXXXRF 57
+P ILCRV++V+ A+ +TDEVFA++TLLP P D +AV +
Sbjct: 51 VPPLILCRVVSVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKE 110
Query: 58 HVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHI 117
SF KTLT SD + GGFSV R A+ P LD S +PP Q + AKD+HG W+FRHI
Sbjct: 111 KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHI 170
Query: 118 FRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA-------------- 163
+RG PRRHLL +GWS FV+ K+L+AGD+ +FLR E+G+L VG+RRA
Sbjct: 171 YRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNP 230
Query: 164 ----------------------MRQQGNVPPSVISSHSMHLGVLATAWHAILTGTIFTVY 201
M++ GN + ++ + + +A A G F V
Sbjct: 231 YPGFSGFLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVV 290
Query: 202 YKPRTSPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGEEAPE-QRFTGTVVGIEDVDSKS 260
Y PR S EF V +++ + GMRFKM FE E++ F GTV ++ D
Sbjct: 291 YYPRASTPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIR 350
Query: 261 WRDSRWRCLKVRWDETSNTPRPDRVSPWKIE 291
W +S WR L+V WDE RVSPW +E
Sbjct: 351 WPNSPWRLLQVAWDEPDLLQNVKRVSPWLVE 381
>AT4G30080.1 | Symbols: ARF16 | auxin response factor 16 |
chr4:14703369-14705564 REVERSE LENGTH=670
Length = 670
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 174/326 (53%), Gaps = 42/326 (12%)
Query: 6 LPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXR-FHVHS--- 61
+P +LCRV+ ++ A+ ++DEVFA++ L+P +D+ V+ E F +S
Sbjct: 60 IPPMVLCRVLAIKYMADAESDEVFAKLRLIPL--KDDEYVDHEYGDGEDSNGFESNSEKT 117
Query: 62 --FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFR 119
F KTLT SD + GGFSV R A+ P LD + +PP Q + AKD+HG+ W+FRHI+R
Sbjct: 118 PSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYR 177
Query: 120 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ-GNVPP-----S 173
G PRRHLL +GWS FV+ K+LVAGD+ +F+R ENG+L VG+RRA R GN P +
Sbjct: 178 GTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWN 237
Query: 174 VISSHSMHLGVL---------------------ATAWHAI------LTGTIFTVYYKPRT 206
I + +L TA I ++G F V Y PR
Sbjct: 238 PIGGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRA 297
Query: 207 SPAEFIVPYDQYMESLKTNYTVGMRFKMRFEGEEAPEQR-FTGTVVGIEDVDSKSWRDSR 265
S +EF V +++ + GMRFKM FE E++ F GTV + D W +S
Sbjct: 298 STSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSP 357
Query: 266 WRCLKVRWDETSNTPRPDRVSPWKIE 291
WR L+V WDE RV+PW +E
Sbjct: 358 WRLLQVAWDEPDLLQNVKRVNPWLVE 383
>AT1G77850.1 | Symbols: ARF17 | auxin response factor 17 |
chr1:29272405-29275193 FORWARD LENGTH=585
Length = 585
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 176/390 (45%), Gaps = 56/390 (14%)
Query: 8 SKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRF---------- 57
S + C + ++QL A+P TDEVFA + L P +++ RF
Sbjct: 61 SPVPCIITSIQLLADPVTDEVFAHLILQP-------MTQQQFTPTNYSRFGRFDGDVDDN 113
Query: 58 -HVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRH 116
V +F K LT SD + GGFSV R AD P L+ PP Q+L D+HG W FRH
Sbjct: 114 NKVTTFAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRH 173
Query: 117 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR-------------- 162
I+RG PRRHLL +GWS FV+SK+L+AGD+ +F+R E+ +GVRR
Sbjct: 174 IYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYG 233
Query: 163 -------------AMRQQGNVPPSVISSHSMHLGVLAT--AWHAILTGTIFTVYYKPRTS 207
A G+ + S + L A A + G F V + P
Sbjct: 234 GDEYNGYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAG 293
Query: 208 PAEFIVPYDQYMESLKTNYTVGMRFKMRFEGEEAPEQRFTGTVVGIEDVDSKSWRDSRWR 267
+EF+V + S+ +T G R KM E E++ + +V ++ WR S W+
Sbjct: 294 WSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWK 353
Query: 268 CLKVRWDETSNTPRPDRVSPWKIEXXXXXXXXXXXX--XXRPKRPR-SIAVLSSPDSSVL 324
L++ WDE RV+PW++E R K P+ LS D +L
Sbjct: 354 QLQITWDEPEILQNVKRVNPWQVEIAAHATQLHTPFPPAKRLKYPQPGGGFLSGDDGEIL 413
Query: 325 TREA--SSKVSVDPLPA----NGFPRVLQG 348
++ SS + DP P+ + FP +QG
Sbjct: 414 YPQSGLSSAAAPDPSPSMFSYSTFPAGMQG 443
>AT1G43950.1 | Symbols: ARF23 | auxin response factor 23 |
chr1:16672582-16673952 REVERSE LENGTH=222
Length = 222
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 106/160 (66%), Gaps = 7/160 (4%)
Query: 2 PVYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEXXXXXXXRFHVHS 61
P DLPSK+ CRVI + LK E ++DE + ++TL+P+ Q E E R V+S
Sbjct: 70 PNCDLPSKLQCRVIAIHLKVENNSDETYVEITLMPDTTQVVIPTENENQF----RPIVNS 125
Query: 62 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFRGQ 121
F K LTASDTS G FSV +HA ECLPPLDMS+ P QEL A DLHGN+WRF+H +R
Sbjct: 126 FTKVLTASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-V 184
Query: 122 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVR 161
PR +GW+ F +SK+LV GD +F RGE GELRVG+R
Sbjct: 185 PRGD--TTGWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222
>AT1G01030.1 | Symbols: NGA3 | AP2/B3-like transcriptional factor
family protein | chr1:11864-12940 REVERSE LENGTH=358
Length = 358
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 60 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFR 119
H F K +T SD + ++HA+ P LD S L +D +G WRFR+ +
Sbjct: 54 HMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRFRYSYW 112
Query: 120 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 151
+ +++ GWS FV K+L AGD F RG
Sbjct: 113 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 144
>AT4G01500.1 | Symbols: NGA4 | AP2/B3-like transcriptional factor
family protein | chr4:639791-640792 FORWARD LENGTH=333
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 60 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFR 119
H F K LT SD + ++HA+ P D L +D +G WRFR+ +
Sbjct: 34 HMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQN---GTVLDFQDKNGKMWRFRYSYW 90
Query: 120 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 151
+ +++ GWS FV K+L AGD F RG
Sbjct: 91 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 122
>AT2G46870.1 | Symbols: NGA1 | AP2/B3-like transcriptional factor
family protein | chr2:19261313-19262245 FORWARD
LENGTH=310
Length = 310
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 60 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFR 119
H F K +T SD + ++HA+ P LD S L +DL G WRFR+ +
Sbjct: 33 HMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYW 91
Query: 120 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR--GENG 154
+ +++ GWS FV K+L AGD F R G++G
Sbjct: 92 NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSG 128
>AT3G61970.1 | Symbols: NGA2 | AP2/B3-like transcriptional factor
family protein | chr3:22951829-22952728 FORWARD
LENGTH=299
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 60 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQE---LAAKDLHGNEWRFRH 116
H F K +T SD + ++HA+ P LD S + + L +D GN WRFR+
Sbjct: 21 HMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNKGLLLNFEDRSGNSWRFRY 79
Query: 117 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 150
+ + +++ GWS FV K+L AGD F R
Sbjct: 80 SYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 113
>AT1G13260.1 | Symbols: RAV1, EDF4 | related to ABI3/VP1 1 |
chr1:4542386-4543420 FORWARD LENGTH=344
Length = 344
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 62 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELAAKDLHGNEWRFRHIFRGQ 121
F K +T SD + + HA++ P + L +D++G WRFR+ +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNS 247
Query: 122 PRRHLLQSGWSVFVSSKRLVAGDAFIFLR--GENGELRVG 159
+ ++L GWS FV K L AGD F R G++ +L +G
Sbjct: 248 SQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287
>AT3G25730.1 | Symbols: EDF3 | ethylene response DNA binding factor
3 | chr3:9396505-9397506 FORWARD LENGTH=333
Length = 333
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 62 FCKTLTASDTSTHGGFSVLRRHADECLP-PL-DMSKQPPTQELAAKDLHGNEWRFRHIFR 119
F KT+T SD + + A++ P PL + + L +D++G WRFR+ +
Sbjct: 183 FEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYW 242
Query: 120 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGEN 153
+ ++L GWS FV KRL AGD F R +
Sbjct: 243 NSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSND 276
>AT2G36080.1 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15148612-15151411 REVERSE LENGTH=244
Length = 244
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 62 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQE---LAAKDLHGNEWRFRHIF 118
F K LT SD + ++HA+ P L + ++ L +D G WRFR+ +
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFP-LAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96
Query: 119 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIF--LRGENGELRVGVRR 162
+ ++L GWS +V K L AGD +F R + G +G RR
Sbjct: 97 WNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>AT1G25560.1 | Symbols: TEM1, EDF1 | AP2/B3 transcription factor
family protein | chr1:8981891-8982976 REVERSE LENGTH=361
Length = 361
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 62 FCKTLTASDTSTHGGFSVLRRHADECLP------PLDMSKQPPTQELAA-KDLHGNEWRF 114
F KT+T SD + ++HA++ P + M+ P L +D G WRF
Sbjct: 195 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRF 254
Query: 115 RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 150
R+ + + ++L GWS FV K L AGD F R
Sbjct: 255 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFER 290
>AT2G36080.2 | Symbols: | AP2/B3-like transcriptional factor family
protein | chr2:15150890-15151411 REVERSE LENGTH=173
Length = 173
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 62 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQEL--AAKDLHGNEWRFRHIFR 119
F K LT SD + ++HA+ P + + L +D G WRFR+ +
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSYW 97
Query: 120 GQPRRHLLQSGWSVFVSSKRLVAGDAFIF--LRGENGELRVGVRR 162
+ ++L GWS +V K L AGD +F R + G +G RR
Sbjct: 98 NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>AT1G68840.2 | Symbols: RAV2, AtRAV2 | related to ABI3/VP1 2 |
chr1:25880442-25881500 FORWARD LENGTH=352
Length = 352
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 62 FCKTLTASDTSTHGGFSVLRRHADECLP-PLDMSKQPPTQELAAKDLHGNEWRFRHIFRG 120
F K +T SD + ++HA++ P P + +D++G WRFR+ +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWN 247
Query: 121 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 150
+ ++L GWS FV K L AGD F R
Sbjct: 248 SSQSYVLTKGWSRFVKEKNLRAGDVVTFER 277
>AT1G68840.1 | Symbols: RAV2, RAP2.8, TEM2, EDF2, AtRAV2 | related
to ABI3/VP1 2 | chr1:25880442-25881500 FORWARD
LENGTH=352
Length = 352
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 62 FCKTLTASDTSTHGGFSVLRRHADECLP-PLDMSKQPPTQELAAKDLHGNEWRFRHIFRG 120
F K +T SD + ++HA++ P P + +D++G WRFR+ +
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWN 247
Query: 121 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLR 150
+ ++L GWS FV K L AGD F R
Sbjct: 248 SSQSYVLTKGWSRFVKEKNLRAGDVVTFER 277