Miyakogusa Predicted Gene

Lj1g3v1442490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1442490.1 Non Chatacterized Hit- tr|K4BTE1|K4BTE1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,51.89,7e-19,no
description,NULL; seg,NULL; HSP20,Alpha crystallin/Hsp20 domain;
HSP20-like chaperones,HSP20-like,gene.g31425.t1.1
         (170 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G76770.1 | Symbols:  | HSP20-like chaperones superfamily prot...    97   7e-21
AT1G76780.1 | Symbols:  | HSP20-like chaperones superfamily prot...    59   2e-09
AT1G59860.1 | Symbols:  | HSP20-like chaperones superfamily prot...    48   3e-06
AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily prot...    47   4e-06

>AT1G76770.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:28813569-28814378 FORWARD LENGTH=244
          Length = 244

 Score = 96.7 bits (239), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 50/96 (52%), Positives = 70/96 (72%), Gaps = 5/96 (5%)

Query: 1   MFTLTAHLKGYKKDNIDISISVDGTEISVSGEKEVQEM---QMIPFKKELKIKGFRKKFK 57
           +F L  HLKG+KKD IDI I+ +G  I +SG K+V+EM   + + +KKE +IK F+K F+
Sbjct: 41  VFFLILHLKGFKKDGIDIEINKEGNLIKISGRKQVEEMVLVKWVEWKKETEIKEFKKVFR 100

Query: 58  IPDGVVLDRIKAKYDEEDAALTIVMPKMEMAKGISG 93
           IPD V+LD+IKA+++EED  LT+ MPK    KGI+G
Sbjct: 101 IPDIVILDKIKARFNEEDGTLTVTMPK--KVKGITG 134


>AT1G76780.1 | Symbols:  | HSP20-like chaperones superfamily
          protein | chr1:28816641-28822256 FORWARD LENGTH=1871
          Length = 1871

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 40/53 (75%), Gaps = 2/53 (3%)

Query: 41 IPFKKELKIKGFRKKFKIPDGVVLDRIKAKYDEEDAALTIVMPKMEMAKGISG 93
          + ++KE++   F+K F+IPD V LD+IKA++D++DA LTI MPK    KGISG
Sbjct: 7  MAWRKEVEFSVFKKVFRIPDTVDLDKIKARFDDDDATLTITMPK--RVKGISG 57


>AT1G59860.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:22031474-22031941 FORWARD LENGTH=155
          Length = 155

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 5/88 (5%)

Query: 4   LTAHLKGYKKDNIDISISVDGTEISVSGEKEVQ--EMQMIPFKKELKIKGFRKKFKIPDG 61
             A L G KK+ + + I  D + + +SGE+ V+  E Q    + E    GF +KF++P+ 
Sbjct: 59  FKADLPGMKKEEVKVEIE-DDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPEN 117

Query: 62  VVLDRIKAKYDEEDAALTIVMPKMEMAK 89
           V +D++KA    E+  LT+ +PK+E  K
Sbjct: 118 VKMDQVKASM--ENGVLTVTVPKVETNK 143


>AT1G07400.1 | Symbols:  | HSP20-like chaperones superfamily protein
           | chr1:2275148-2275621 FORWARD LENGTH=157
          Length = 157

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 5/88 (5%)

Query: 4   LTAHLKGYKKDNIDISISVDGTEISVSGEKEVQ--EMQMIPFKKELKIKGFRKKFKIPDG 61
             A L G KK+ + + I  D + + +SGE+ V+  E Q    + E     F +KFK+P+ 
Sbjct: 61  FKADLPGMKKEEVKVEIE-DDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPEN 119

Query: 62  VVLDRIKAKYDEEDAALTIVMPKMEMAK 89
           V +D++KA    E+  LT+ +PK+E AK
Sbjct: 120 VKMDQVKASM--ENGVLTVTVPKVEEAK 145