Miyakogusa Predicted Gene

Lj1g3v1442480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1442480.1 tr|A9RJN2|A9RJN2_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_159473,23.89,8e-19,DUF793,Protein BYPASS-related;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,NODE_924_length_1510_cov_234.939072.path2.1
         (296 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G74450.1 | Symbols:  | Protein of unknown function (DUF793) |...   396   e-110
AT1G18740.1 | Symbols:  | Protein of unknown function (DUF793) |...   389   e-108
AT1G43630.1 | Symbols:  | Protein of unknown function (DUF793) |...   368   e-102
AT1G63930.1 | Symbols: ROH1 | from the Czech 'roh' meaning 'corn...   222   3e-58
AT4G11300.1 | Symbols:  | Protein of unknown function (DUF793) |...   165   3e-41
AT4G23530.1 | Symbols:  | Protein of unknown function (DUF793) |...   154   9e-38

>AT1G74450.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr1:27982737-27983930 FORWARD LENGTH=397
          Length = 397

 Score =  396 bits (1017), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 199/305 (65%), Positives = 247/305 (80%), Gaps = 19/305 (6%)

Query: 1   MVADYFERSVKALDVCNAIRDGIEQIRQWQKLLEIVLFALGGN------QRSIGEGQFRR 54
           +V+DYFERSVKALDVCNAIRDG+EQIRQWQKL+EIV+ A   N      +R +GEGQFRR
Sbjct: 103 LVSDYFERSVKALDVCNAIRDGVEQIRQWQKLIEIVICAFNNNGGGSSGKRPLGEGQFRR 162

Query: 55  AKKALIDLAIGMLDDKDSNASV---SHRNRSFGKSRDXXXXXXXXXXXXXXRSLGHFRSL 111
           A+K LI+LAIGMLD+KDS++S     HRNRSFG++++              R++GHFRSL
Sbjct: 163 ARKTLIELAIGMLDEKDSSSSSVSSQHRNRSFGRNKEQLHH----------RTIGHFRSL 212

Query: 112 SWSVSRTWSAARQLQAIGNNTYPPRASDLVASHGLAMPVFIMNSILLFVMWALVAGIPCQ 171
           SWSVSR+WSA++QLQAIGNN   PRASD+ A++GL +PV+ M ++LLFVMWALVA IPCQ
Sbjct: 213 SWSVSRSWSASKQLQAIGNNLATPRASDITATNGLIVPVYTMTTVLLFVMWALVAAIPCQ 272

Query: 172 DRGLHAHFTIPRNYTWAVPLLSLHERIFEESKKRERKNACGLLKEIYQIEKCARAMNELA 231
           DRGL  HF +PRNY W   L+SLH+RI EESKKRERKN CGLLKEI+Q EK +R MNEL 
Sbjct: 273 DRGLQVHFNVPRNYQWGGSLMSLHDRIIEESKKRERKNTCGLLKEIHQFEKTSRLMNELV 332

Query: 232 DSVQFPLTEEREGEVRKRVQEVSQVCDALKDGLDPLERQVREVFHRIVRSRTEGLDSLGR 291
           DSVQFPL+EE+E EVR+RV+E+ ++ +ALK+GLDP ER+VREVFHRIVRSRTEGLD++G+
Sbjct: 333 DSVQFPLSEEKEMEVRERVEELGKLQEALKNGLDPFERKVREVFHRIVRSRTEGLDTVGK 392

Query: 292 PNNAE 296
            + +E
Sbjct: 393 HHGSE 397


>AT1G18740.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr1:6464125-6465273 FORWARD LENGTH=382
          Length = 382

 Score =  389 bits (1000), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 188/291 (64%), Positives = 237/291 (81%), Gaps = 14/291 (4%)

Query: 1   MVADYFERSVKALDVCNAIRDGIEQIRQWQKLLEIVLFALGGNQRSIGEGQFRRAKKALI 60
           +++DYFERS+KALDVCNAIRDGIEQIRQW+KL +IV+ AL  + R IGEGQ RRAKKALI
Sbjct: 104 LISDYFERSIKALDVCNAIRDGIEQIRQWEKLADIVISALDSH-RPIGEGQLRRAKKALI 162

Query: 61  DLAIGMLDDKD--SNASVSHRNRSFGKSRDXXXXXXXXXXXXXXRSLGHFRSLSWSVSRT 118
           DLAIGMLD+KD  S  +++HRNRSFG+ +D              RS+GHFRSLSWSVSR+
Sbjct: 163 DLAIGMLDEKDHPSGTNLAHRNRSFGRVKDSHH-----------RSIGHFRSLSWSVSRS 211

Query: 119 WSAARQLQAIGNNTYPPRASDLVASHGLAMPVFIMNSILLFVMWALVAGIPCQDRGLHAH 178
           WSA++QLQA+ +N   PR +D+VAS+GLA+PV+ M S+LLFVMW LVA IPCQDRGL  +
Sbjct: 212 WSASKQLQALASNLATPRPNDVVASNGLAVPVYTMTSVLLFVMWVLVAAIPCQDRGLQVN 271

Query: 179 FTIPRNYTWAVPLLSLHERIFEESKKRERKNACGLLKEIYQIEKCARAMNELADSVQFPL 238
           F +PR++ WA P++SLH++I EESK+R+RKN CGLLKEI +IEK +R MNEL DS+ FPL
Sbjct: 272 FFVPRHFQWAAPVMSLHDKIVEESKRRDRKNCCGLLKEIDRIEKSSRLMNELIDSIHFPL 331

Query: 239 TEEREGEVRKRVQEVSQVCDALKDGLDPLERQVREVFHRIVRSRTEGLDSL 289
            +++E EV++RV E+ QV +AL++GLDP ER+VREVFHRIVRSRTE LDSL
Sbjct: 332 NDDKEVEVKQRVDELVQVREALRNGLDPFERKVREVFHRIVRSRTESLDSL 382


>AT1G43630.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr1:16436445-16437686 REVERSE LENGTH=413
          Length = 413

 Score =  368 bits (945), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 182/298 (61%), Positives = 235/298 (78%), Gaps = 16/298 (5%)

Query: 1   MVADYFERSVKALDVCNAIRDGIEQIRQWQKLLEIVLFALGGNQRSIGEGQFRRAKKALI 60
           ++ +YFERSVKALDVCNAIRDGIEQIRQWQKL+EIV+ AL  NQR +GEG+  RAKKALI
Sbjct: 130 LIEEYFERSVKALDVCNAIRDGIEQIRQWQKLIEIVISALDTNQRQLGEGEIHRAKKALI 189

Query: 61  DLAIGMLDDKDSNASVSHRNRSFGKSRDXXXXXXXXXXXXXXRSLGHFRSLSWSVSRTWS 120
           DLAIGMLD+KDS  S +HRNRSF +++D              + +G+ RSLSWSVSR+WS
Sbjct: 190 DLAIGMLDEKDS--SNTHRNRSFTRNKDHN------------QHIGYIRSLSWSVSRSWS 235

Query: 121 AARQLQAIGNNTYPPRASDLVASHGLAMPVFIMNSILLFVMWALVAGIPCQDRGLHAHFT 180
           A+RQLQ IGNN   PRASD++A++GLA+ V+ M SILLFV W LVA IPCQDRGLH HF 
Sbjct: 236 ASRQLQGIGNNLATPRASDVMATNGLALTVYTMTSILLFVTWVLVAAIPCQDRGLHVHFY 295

Query: 181 IPRNYTWAVPLLSLHERIFEES-KKRERKNACGLLKEIYQIEKCARAMNELADSVQFPLT 239
            PR++ WAVP++SLH++I +ES K+ ++K  CGLL+EI QIE+ +R +++L DS  F LT
Sbjct: 296 FPRHFQWAVPVMSLHDKIMDESKKRDKKKKGCGLLREINQIERNSRMLSDLIDSDNFSLT 355

Query: 240 EER-EGEVRKRVQEVSQVCDALKDGLDPLERQVREVFHRIVRSRTEGLDSLGRPNNAE 296
           +E+   EV++RVQE+  VC+A+K+GLDP +R+VR+VFH+IVR+RTE LDSLG+  N E
Sbjct: 356 DEKCTLEVKERVQELMNVCEAIKEGLDPFDRKVRDVFHQIVRTRTEALDSLGKLQNQE 413


>AT1G63930.1 | Symbols: ROH1 | from the Czech 'roh' meaning 'corner'
           | chr1:23727927-23729174 FORWARD LENGTH=415
          Length = 415

 Score =  222 bits (565), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 113/302 (37%), Positives = 188/302 (62%), Gaps = 23/302 (7%)

Query: 1   MVADYFERSVKALDVCNAIRDGIEQIRQWQKLLEIVLFALGGNQRSIGEGQFRRAKKALI 60
           +V +  +RS+KALD+C A+ +GI+ +R +Q+L EI + AL   QR +G+G  RRAK+AL 
Sbjct: 113 LVPEMLDRSIKALDICTAVVNGIDSVRHYQRLAEIAVTAL--EQRPLGDGNVRRAKRALA 170

Query: 61  DLAIGM-LDDKDSNA----------SVSHRNRSFGKSRDXXXXXXXXXXXXXXRSLGHFR 109
           +L + + L+DK++ +            + R+ SFG+                  ++G  +
Sbjct: 171 NLVVALSLEDKENVSGGGGGGGGGNKTTERSWSFGRRSGGSSAASKGGA-----TIGQLK 225

Query: 110 SLSWSVSRTWSAARQLQAIGNNTYPPRASDLVASHGLAMPVFIMNSILLFVMWALVAGIP 169
           S SW+V R WSAA+Q+ A+  N  PPR ++   + GL  P+FIM+++++FVMW L A +P
Sbjct: 226 SSSWAVGRNWSAAKQIHAMTANLTPPRGNE---AAGLPQPMFIMSTVMVFVMWVLTAAVP 282

Query: 170 CQDR-GLHAHFTIP-RNYTWAVPLLSLHERIFEESKKRERKNACGLLKEIYQIEKCARAM 227
           CQ+R GL  H  +P ++  WA  L+ +HE+I +E KK+E+K + GL++E+ ++EK   ++
Sbjct: 283 CQERSGLANHLPVPPKHLNWAQSLIGIHEKIGDEWKKKEKKGSAGLMEEMTRMEKLGHSL 342

Query: 228 NELADSVQFPLTEEREGEVRKRVQEVSQVCDALKDGLDPLERQVREVFHRIVRSRTEGLD 287
            E AD   +P  ++       +V E++++C  +++ L PL++Q+REVFHRIVRSR E L+
Sbjct: 343 MEFADGFHYPAEKDAAESAAVQVAEMAEICRRMEEELVPLQQQIREVFHRIVRSRAEILE 402

Query: 288 SL 289
            L
Sbjct: 403 VL 404


>AT4G11300.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr4:6872345-6873460 REVERSE LENGTH=371
          Length = 371

 Score =  165 bits (417), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/290 (34%), Positives = 160/290 (55%), Gaps = 21/290 (7%)

Query: 1   MVADYFERSVKALDVCNAIRDGIEQIRQWQKLLEIVLFALGGNQRSIGEGQFRRAKKALI 60
           +V +  +R VKALD+C A+ +G++ +RQ Q+  EI + AL   Q  + +G  RRAK+AL 
Sbjct: 100 LVPEMLDRIVKALDICTAVVNGVDSVRQIQRCAEIAVTAL--KQTPLSDGSVRRAKRALT 157

Query: 61  DLAIGMLDDKDSNASVSHRNRSFGKSRDXXXXXXXXXXXXXXRSLGHFRSLSWSVSRTWS 120
            L   +  + D N+  S        S D                 G        VS+ WS
Sbjct: 158 SLLAAL--NADKNSGSSGGGSGRRSSTDQWSSFGRRSGGSSGGGGGGAGC----VSKNWS 211

Query: 121 AARQLQAIGNNTYPPRASDLVASHGLAMPVFIMNSILLFVMWALVAGIPCQ-DRGLHAHF 179
           AA+Q+QA+  N   PR        G A P++IM+S+++ VMW LV  +PCQ   GL  H 
Sbjct: 212 AAKQIQAMTANLVAPRG-------GEASPMYIMSSVMVMVMWTLVVAVPCQTSNGLMVHV 264

Query: 180 TIPRNYTWAVPLLSLHERIFEESKKRERKNACGLLKEIYQIEKCARAMNELADSVQFPLT 239
            +P+N  WA   +S+ ER+ EE K++E +   GL++E+ ++E+    + E ++  +F   
Sbjct: 265 PLPKNQVWANAAVSISERVGEEMKRKETRGG-GLMEEMQRMERIGLKLMEFSEGFRF--- 320

Query: 240 EEREGEVRKRVQEVSQVCDALKDGLDPLERQVREVFHRIVRSRTEGLDSL 289
              E +V   V E+ ++C  ++DGL+ L+R+VREVFHR+V+SR+E L+ +
Sbjct: 321 -NGEEDVVAEVAEMEEICRKMEDGLEGLQRRVREVFHRLVKSRSEILEVI 369


>AT4G23530.1 | Symbols:  | Protein of unknown function (DUF793) |
           chr4:12279171-12280361 FORWARD LENGTH=396
          Length = 396

 Score =  154 bits (388), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 110/297 (37%), Positives = 177/297 (59%), Gaps = 34/297 (11%)

Query: 1   MVADYFERSVKALDVCNAIRDGIEQIRQWQKLLEIVLFALGGNQRSIGEGQFRRAKKALI 60
           ++ +  +R +KALD+CNA+ +GI+ +RQ ++  EI + AL   QR + +G  RRAK+AL 
Sbjct: 110 VLPEMLDRILKALDLCNAVVNGIDSVRQSRRFAEIAVTAL--KQRPLCDGSVRRAKRALT 167

Query: 61  DLAIGMLDD--KDSNAS---------VSHRNRSFGKSRDXXXXXXXXXXXXXXRSLGHFR 109
            L IG+  D  +D N+           + R+ SFG   +                 G + 
Sbjct: 168 SLLIGLNADERRDRNSGGSGCSNQRRTTSRSWSFGTRSNVTGG-------------GLYG 214

Query: 110 SLSWSVSRTWSAARQLQAIGNNTYPPRASDLVASHGLAMPVFIMNSILLFVMWALVAGIP 169
            +   VS+ WSA++Q+QA+  N   PR ++   + G AMPV+IM+S+++ VMW LVA +P
Sbjct: 215 QV---VSKNWSASKQIQAMVANLVLPRGAE---ASGPAMPVYIMSSVMVLVMWVLVAAVP 268

Query: 170 CQDRG-LHAHFTIPRNYTWAVPLLSLHERIFEESKKRERK-NACGLLKEIYQIEKCARAM 227
           CQ    L A   +P++  WA   +S+ ERI EE K++E++    GL++E+ ++EK   ++
Sbjct: 269 CQTSSVLVAPLPLPKHQNWASAAMSIQERIGEEIKRKEKRCGGGGLMEEMQRMEKIGLSL 328

Query: 228 NELADSVQFPLTEEREGEVRKRVQEVSQVCDALKDGLDPLERQVREVFHRIVRSRTE 284
            E A+  +FP  EE E EV ++V E+ ++C  ++ GL+ L+RQVR+VFHR+VRSR E
Sbjct: 329 MEFAERFRFPADEEEEVEVAEKVDEMEEICRRMEVGLEDLQRQVRQVFHRLVRSRIE 385