Miyakogusa Predicted Gene

Lj1g3v1388180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1388180.1 Non Chatacterized Hit- tr|I4HQB7|I4HQB7_MICAE
Uncharacterized protein OS=Microcystis aeruginosa PCC
,33.33,7e-18,CpeT,Chromophore lyase CpcT/CpeT;
seg,NULL,NODE_12968_length_2450_cov_41.697552.path1.1
         (265 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G51020.1 | Symbols: CRL | crumpled leaf | chr5:20745560-20747...   437   e-123

>AT5G51020.1 | Symbols: CRL | crumpled leaf | chr5:20745560-20747165
           REVERSE LENGTH=269
          Length = 269

 Score =  437 bits (1123), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 204/256 (79%), Positives = 227/256 (88%)

Query: 10  NGWNRARGLAVKTLLLIGGALLVKRLRKSTTRWDHARFVSNSLTGEKYSKEQASRDPENY 69
           NGW+RARGL VKTL+LIGGALL+KRL KSTTR DHAR VS SLTGEK+++EQASRDP+NY
Sbjct: 14  NGWSRARGLVVKTLVLIGGALLIKRLTKSTTRRDHARVVSRSLTGEKFTREQASRDPDNY 73

Query: 70  FNIRMLTCPAAELVDGSKVLYFEQAFWRSPQKPFRQRFYMVKPCPKELKCDVELSTYAIR 129
           FNIRML+CPAAE+VDGS+VLY EQAFWR+PQKPFRQR YMVKPCPKELKCDVE+S+YAIR
Sbjct: 74  FNIRMLSCPAAEMVDGSEVLYLEQAFWRTPQKPFRQRLYMVKPCPKELKCDVEVSSYAIR 133

Query: 130 DMEEYKNFCDRPKDQRPQPEEVIGDIAEHLTTIHLKRCPRGKRCLYEGSTPPGGFPNSWN 189
           D EEYKNFCDRPKDQRP PEEVIGDI EHLTTIHL  C RGKRCLYEGST PGGFPNSWN
Sbjct: 134 DAEEYKNFCDRPKDQRPLPEEVIGDIGEHLTTIHLNCCDRGKRCLYEGSTSPGGFPNSWN 193

Query: 190 GATYCTSELAVLKNNEIHTWDRGFDDDGNQVWGQKDGPYEFKPAPTSCFNDMLSPLNFPP 249
           GA+YCTS+LAVLKNNEIH WDRGFD++ NQVWG K+GPYEFKPA +S  N+ LS LN   
Sbjct: 194 GASYCTSDLAVLKNNEIHLWDRGFDENRNQVWGPKEGPYEFKPATSSSINENLSALNILY 253

Query: 250 PPSMDRRIEGSFILQD 265
             S+D+ I+GS ILQD
Sbjct: 254 QSSIDKPIQGSLILQD 269