Miyakogusa Predicted Gene
- Lj1g3v1388090.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1388090.1 Non Chatacterized Hit- tr|Q0WPI1|Q0WPI1_ARATH
Putative uncharacterized protein At5g05180 (Fragment)
,37.89,3e-19,coiled-coil,NULL;
seg,NULL,gene.Ljchr1_pseudomol_20120830.path1.gene3454.1
(194 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G05180.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 80 8e-16
AT5G05180.2 | Symbols: | unknown protein; BEST Arabidopsis thal... 80 1e-15
AT2G30500.2 | Symbols: | Kinase interacting (KIP1-like) family ... 76 2e-14
AT2G30500.1 | Symbols: | Kinase interacting (KIP1-like) family ... 76 2e-14
AT5G58320.2 | Symbols: | Kinase interacting (KIP1-like) family ... 57 8e-09
AT3G10880.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 55 3e-08
>AT5G05180.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G10880.1); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
- 339 (source: NCBI BLink). | chr5:1536924-1538318
FORWARD LENGTH=432
Length = 432
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 34/190 (17%)
Query: 31 EEIRNILSEKLEM---EEALKGEIELLKAEIEQREKNIKDLNEKLDTSKL-------ERD 80
++I++ +EK+EM E L+ EI LK ++ R ++I+ LN+ D KL E+D
Sbjct: 235 DQIKHSEAEKMEMQRKEVELQAEISALKTDLATRGEHIEALNKDFDKHKLRYDMLMAEKD 294
Query: 81 NLIVEVGSLKEEVKSRDGRIENMDNHLNQLHMEHVKLIA-------GMEE---------- 123
+ EV +LK E++SRD +I+ M+ LNQL + +L++ +EE
Sbjct: 295 GVCAEVDNLKAEMRSRDIQIQQMEEQLNQLVYKQTELVSESGNAKNTVEELKAVVKELEI 354
Query: 124 -------AHRQXXXXXXXXXXXXXXXXRRKTEILEGAEEKREAIRQLCFSLEHYRNGYHM 176
A + ++ I +G EEKREAIRQLCFSL+HY++GY
Sbjct: 355 EVELQSKAKKTVEELRATVWEMEKHAELQRNAISQGEEEKREAIRQLCFSLDHYKSGYKQ 414
Query: 177 LRQHFTGHKR 186
L + +G+ +
Sbjct: 415 LLWYLSGNNQ 424
>AT5G05180.2 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G10880.1); Has 50151 Blast hits to 28081
proteins in 1838 species: Archae - 860; Bacteria - 6013;
Metazoa - 25867; Fungi - 3836; Plants - 2236; Viruses -
90; Other Eukaryotes - 11249 (source: NCBI BLink). |
chr5:1536924-1538318 FORWARD LENGTH=408
Length = 408
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 34/190 (17%)
Query: 31 EEIRNILSEKLEM---EEALKGEIELLKAEIEQREKNIKDLNEKLDTSKL-------ERD 80
++I++ +EK+EM E L+ EI LK ++ R ++I+ LN+ D KL E+D
Sbjct: 211 DQIKHSEAEKMEMQRKEVELQAEISALKTDLATRGEHIEALNKDFDKHKLRYDMLMAEKD 270
Query: 81 NLIVEVGSLKEEVKSRDGRIENMDNHLNQLHMEHVKLIA-------GMEE---------- 123
+ EV +LK E++SRD +I+ M+ LNQL + +L++ +EE
Sbjct: 271 GVCAEVDNLKAEMRSRDIQIQQMEEQLNQLVYKQTELVSESGNAKNTVEELKAVVKELEI 330
Query: 124 -------AHRQXXXXXXXXXXXXXXXXRRKTEILEGAEEKREAIRQLCFSLEHYRNGYHM 176
A + ++ I +G EEKREAIRQLCFSL+HY++GY
Sbjct: 331 EVELQSKAKKTVEELRATVWEMEKHAELQRNAISQGEEEKREAIRQLCFSLDHYKSGYKQ 390
Query: 177 LRQHFTGHKR 186
L + +G+ +
Sbjct: 391 LLWYLSGNNQ 400
>AT2G30500.2 | Symbols: | Kinase interacting (KIP1-like) family
protein | chr2:12998329-13000072 REVERSE LENGTH=517
Length = 517
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 92/194 (47%), Gaps = 46/194 (23%)
Query: 1 MRSEMTKLLEDRTNLEEQIREWECRGRSFEEEIRNILSEKLEMEEALKGEIELLKAEIEQ 60
++ EM+K+LE+R+ L EQ+RE E IR I EK E EE L+G E +
Sbjct: 370 IKGEMSKMLEERSQLGEQLRE-------LESHIRLIKEEKAETEEKLRGGTEKISG---- 418
Query: 61 REKNIKDLNEKLDTSKLERDNLIVEVGSLKEEVKSRDGRIENMDNHLNQLHMEHVKLIAG 120
++D E L+EE+ R+ +I+ + H+ +LHME V+L
Sbjct: 419 ----MRD-----------------ESNVLREEIGKREEKIKETEKHMEELHMEQVRL--- 454
Query: 121 MEEAHRQXXXXXXXXXXXXXXXXRRKTEILEGAEEKREAIRQLCFSLEHYRNGYHMLRQH 180
R + E AE+KREAIRQLC SL+HYR+GY L +
Sbjct: 455 -----------RRRSSELTEEVERTRVSASEMAEQKREAIRQLCMSLDHYRDGYDRLWRV 503
Query: 181 FTGHKRVRVPVLAT 194
GHK RV VL+T
Sbjct: 504 VAGHKSKRVVVLST 517
>AT2G30500.1 | Symbols: | Kinase interacting (KIP1-like) family
protein | chr2:12998329-13000072 REVERSE LENGTH=517
Length = 517
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 92/194 (47%), Gaps = 46/194 (23%)
Query: 1 MRSEMTKLLEDRTNLEEQIREWECRGRSFEEEIRNILSEKLEMEEALKGEIELLKAEIEQ 60
++ EM+K+LE+R+ L EQ+RE E IR I EK E EE L+G E +
Sbjct: 370 IKGEMSKMLEERSQLGEQLRE-------LESHIRLIKEEKAETEEKLRGGTEKISG---- 418
Query: 61 REKNIKDLNEKLDTSKLERDNLIVEVGSLKEEVKSRDGRIENMDNHLNQLHMEHVKLIAG 120
++D E L+EE+ R+ +I+ + H+ +LHME V+L
Sbjct: 419 ----MRD-----------------ESNVLREEIGKREEKIKETEKHMEELHMEQVRL--- 454
Query: 121 MEEAHRQXXXXXXXXXXXXXXXXRRKTEILEGAEEKREAIRQLCFSLEHYRNGYHMLRQH 180
R + E AE+KREAIRQLC SL+HYR+GY L +
Sbjct: 455 -----------RRRSSELTEEVERTRVSASEMAEQKREAIRQLCMSLDHYRDGYDRLWRV 503
Query: 181 FTGHKRVRVPVLAT 194
GHK RV VL+T
Sbjct: 504 VAGHKSKRVVVLST 517
>AT5G58320.2 | Symbols: | Kinase interacting (KIP1-like) family
protein | chr5:23577728-23579641 FORWARD LENGTH=558
Length = 558
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 101/195 (51%), Gaps = 43/195 (22%)
Query: 1 MRSEMTKLLEDRTNLEEQIREWECRGRSFEEEIRNILSEKLEMEEALKGEIELLKAEIEQ 60
+++++ KLLE++ + ++Q +E E R E+E R + +EK+E EE LK EIE+L E +
Sbjct: 406 VKADIAKLLEEKIHRDDQFKELEANVRYLEDERRKVNNEKIEEEEKLKSEIEVLTLEKVE 465
Query: 61 REKNIKDLNEKLDTSKLERDNLIVEVGSLKEEVKSRDGRIENMDNHLNQLHMEHVKLIAG 120
+ + I+ L+ K+ S+LE E+ L E+K+RD R M+ +
Sbjct: 466 KGRCIETLSRKV--SELES-----EISRLGSEIKARDDRTMEMEKEV------------- 505
Query: 121 MEEAHRQXXXXXXXXXXXXXXXXRRKTEILEGAEEKREAIRQLCFSLEHYRNGYHMLRQH 180
+++ E+ E AEEKRE IRQLCFSL++ R+ Y LR
Sbjct: 506 ----------------------EKQRRELEEVAEEKREVIRQLCFSLDYSRDEYKRLRIA 543
Query: 181 FTGHKRVRV-PVLAT 194
F+GH R +LA+
Sbjct: 544 FSGHPPTRPSSILAS 558
>AT3G10880.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G05180.1); Has 15699 Blast hits to 11378
proteins in 1134 species: Archae - 391; Bacteria - 2054;
Metazoa - 6851; Fungi - 1354; Plants - 1096; Viruses -
119; Other Eukaryotes - 3834 (source: NCBI BLink). |
chr3:3406092-3407131 FORWARD LENGTH=319
Length = 319
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 15 LEEQIREWECRGRSFEEEIRNI------LSEKLEMEEALKGEIELLKAEIEQREKNIKDL 68
LE RE E R + E E R + LS+ + E L+ E++ +K + E + L
Sbjct: 150 LETARRELEARNIAIETEKRYVVDLESKLSDSVYKIEKLESELDEVKECLGVSEAEVSKL 209
Query: 69 NEKL-----DTSKLERDNLIVEVGSLKEEVKSRDGRIENMDNHLNQ-LHMEHVKLIAGME 122
E L + SKL+ DN + SL+ E++SR+ +IE M+ +LNQ L + ++ + E
Sbjct: 210 MEMLSECKNEKSKLQTDNADDLLDSLRAELRSREIQIEQMEEYLNQVLCLNETEIKSESE 269
Query: 123 EAHRQXXXXXXXXXXXXXXXXRRKTEILEGAEEKREAIRQLCFSLEHYRN 172
++ I E EEKREAIRQLCFSL+HY N
Sbjct: 270 TDKNIVEELRAKVEVLEKQVELQRNVITEREEEKREAIRQLCFSLDHYMN 319