Miyakogusa Predicted Gene
- Lj1g3v1386470.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1386470.1 Non Chatacterized Hit- tr|K4AZA1|K4AZA1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,24.81,3e-17,PPR,Pentatricopeptide repeat; seg,NULL; PPR:
pentatricopeptide repeat domain,Pentatricopeptide repea,CUFF.27277.1
(562 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 431 e-121
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 430 e-120
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 420 e-117
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 415 e-116
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 413 e-115
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 404 e-113
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 403 e-112
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-112
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 391 e-109
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 388 e-108
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 388 e-108
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 386 e-107
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 384 e-107
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 384 e-106
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 378 e-105
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-104
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-103
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 373 e-103
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 371 e-103
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 370 e-102
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 369 e-102
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 367 e-101
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 365 e-101
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 364 e-101
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 364 e-100
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 363 e-100
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 362 e-100
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 358 8e-99
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 8e-99
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 357 2e-98
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 356 2e-98
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 355 5e-98
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 353 2e-97
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 352 5e-97
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 352 6e-97
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 351 8e-97
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 349 3e-96
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 5e-95
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 344 1e-94
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 1e-94
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 343 1e-94
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 343 3e-94
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 3e-94
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 5e-94
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 7e-94
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 1e-93
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 338 4e-93
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 337 1e-92
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 1e-92
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 336 3e-92
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 333 1e-91
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 6e-91
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 1e-90
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 6e-90
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 1e-89
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 326 3e-89
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 8e-89
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 2e-88
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 6e-88
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 9e-87
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 314 1e-85
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 9e-85
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 308 6e-84
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 305 8e-83
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 1e-81
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 294 1e-79
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 292 4e-79
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 6e-79
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 1e-78
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 285 4e-77
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 283 2e-76
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 5e-75
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 5e-75
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 8e-75
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 2e-74
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 8e-72
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 265 6e-71
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 264 1e-70
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 264 1e-70
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 263 2e-70
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 6e-70
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 6e-70
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 260 1e-69
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 4e-69
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 9e-69
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 6e-68
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 4e-67
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 249 3e-66
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 6e-66
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 8e-66
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 4e-64
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 2e-63
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 237 1e-62
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 237 2e-62
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 4e-61
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 8e-61
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 9e-61
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 230 2e-60
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 5e-60
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 9e-60
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 223 2e-58
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 221 2e-57
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 220 2e-57
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 218 8e-57
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 9e-57
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 4e-56
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 2e-55
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 4e-55
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 4e-55
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 6e-55
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 9e-55
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 1e-54
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 3e-54
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 206 3e-53
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 3e-52
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 3e-52
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 203 3e-52
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 4e-52
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 4e-52
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 4e-51
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 198 7e-51
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 197 1e-50
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 7e-50
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 8e-50
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 2e-49
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 3e-49
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 6e-49
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 6e-49
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 5e-48
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 9e-48
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 2e-46
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 3e-46
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 182 6e-46
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 179 7e-45
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 9e-44
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 174 1e-43
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 2e-43
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 5e-42
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 6e-42
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 5e-40
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 5e-40
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 4e-38
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 3e-34
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 1e-27
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 99 9e-21
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 88 2e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 88 2e-17
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 88 2e-17
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 86 5e-17
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 84 2e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 6e-16
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 81 2e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 7e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 76 8e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 76 8e-14
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 74 3e-13
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 4e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 71 2e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 69 1e-11
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 67 3e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 67 4e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 60 3e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 4e-09
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 59 7e-09
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 54 3e-07
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 53 4e-07
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 50 3e-06
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 431 bits (1107), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/570 (39%), Positives = 340/570 (59%), Gaps = 12/570 (2%)
Query: 1 MNRVYNLHATLIKTGQHNNPLSL-RTFFLRCAELPSADTASYAAAVLLRFPIP-DPTPYN 58
+ ++ +HA I+ G + L + LPS SYA V + P + +N
Sbjct: 30 ITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWN 89
Query: 59 TVIRHLA-LHSPTLATTLFSHMHRTG-VTVDHFTFPLIXXXXXXXXXX---XXXXXXXXX 113
T+IR A + + A +L+ M +G V D T+P +
Sbjct: 90 TLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIR 149
Query: 114 XGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSL 173
GF S I+VQN+L++ Y + G + A +FD+MP++DL +W+++I F NG P EAL+L
Sbjct: 150 SGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALAL 209
Query: 174 FQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALIN 233
+ +M + DG ++S++SA + +GAL LG VH Y+ + GL + L++
Sbjct: 210 YTEMNSKGIK----PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 265
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREA-GLRPDGA 292
+Y+RCG ++ + +F+EM +N V+WTSLI GLAV+G +EA+ F+ M GL P
Sbjct: 266 LYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEI 325
Query: 293 AYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVED 352
+ L ACSH G+V++G+ F MR EY + P +EH+GCMVDLL RAG + +A+++++
Sbjct: 326 TFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS 385
Query: 353 MPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXX 412
MP++PN VIWRTLLGAC H D LAE A+ ++ +L+P+H GDYVLLSN Y
Sbjct: 386 MPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDV 445
Query: 413 XXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYA 472
+R M + + K PG S+V + VHEF+ GD SHPQ + I L + ++ GY
Sbjct: 446 QKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYV 505
Query: 473 PNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHV 532
P S+V D++EEEKE+++ YHSEK+A+AF+L+ +R I V+KNLR+C DCH +K V
Sbjct: 506 PQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLV 565
Query: 533 SGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
S +++++I++RDR+RFHHF GSCSC D+W
Sbjct: 566 SKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/443 (46%), Positives = 297/443 (67%), Gaps = 4/443 (0%)
Query: 120 IFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
I + N +I+ Y G A LFD+M QR + SW+T+I ++ NG+ +A+ +F++M+
Sbjct: 208 IVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK 267
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
GD + + V ++SV+ A+S LG+LELG W+H Y +G+ + LG+ALI+MYS+CG
Sbjct: 268 GDIR----PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 323
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
I++++ VFE +P NV+TW+++I G A+HG++ +A+ F MR+AG+RP AY L
Sbjct: 324 IIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 383
Query: 300 ACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNS 359
ACSHGGLVE+G R F M S G+ P +EHYGCMVDLLGR+G+L EA +F+ +MPIKP+
Sbjct: 384 ACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDD 443
Query: 360 VIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSM 419
VIW+ LLGAC ++ + ++ + ++ PH G YV LSN Y +R M
Sbjct: 444 VIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRM 503
Query: 420 RENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVL 479
+E I K+PG S++ ID V+HEFV D+SHP+ +EI LV + D ++L GY P T+ VL
Sbjct: 504 KEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVL 563
Query: 480 HDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKD 539
+++EE+KE+ L YHSEK+A AF L+ K IR++KNLRIC DCHS +K +S ++ +
Sbjct: 564 LNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRK 623
Query: 540 IIIRDRNRFHHFSKGSCSCGDFW 562
I +RDR RFHHF GSCSC D+W
Sbjct: 624 ITVRDRKRFHHFQDGSCSCMDYW 646
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 124/285 (43%), Gaps = 54/285 (18%)
Query: 136 LNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAE--ALSLFQQMQLGDPQVPESTDGVMM 193
L+ A +F++MPQR+ SW+T+I F+ + A++LF +M + P
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNR---FTF 131
Query: 194 LSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSI------------ 241
SV+ A + G ++ G +H + G G + + L+ MY CG +
Sbjct: 132 PSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNII 191
Query: 242 --------DRSVK-------------------------VFEEMPHRNVVTWTSLITGLAV 268
DR + +F++M R+VV+W ++I+G ++
Sbjct: 192 EKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSL 251
Query: 269 HGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDG-WRVFESMRSEYGVYPML 327
+G ++A+ FR+M++ +RP+ + L A S G +E G W + S + +L
Sbjct: 252 NGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVL 311
Query: 328 EHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNH 372
++D+ + G++ +A E +P + N + W ++ H
Sbjct: 312 G--SALIDMYSKCGIIEKAIHVFERLP-RENVITWSAMINGFAIH 353
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 198/449 (44%), Positives = 296/449 (65%), Gaps = 5/449 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF S I+VQN+L++ Y + G + A +FD+MP++DL +W+++I F NG P EAL+L+
Sbjct: 18 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 77
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+M + DG ++S++SA + +GAL LG VH Y+ + GL + L+++
Sbjct: 78 TEMNSKGIK----PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDL 133
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREA-GLRPDGAA 293
Y+RCG ++ + +F+EM +N V+WTSLI GLAV+G +EA+ F+ M GL P
Sbjct: 134 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEIT 193
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+ L ACSH G+V++G+ F MR EY + P +EH+GCMVDLL RAG + +A+++++ M
Sbjct: 194 FVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM 253
Query: 354 PIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXX 413
P++PN VIWRTLLGAC H D LAE A+ ++ +L+P+H GDYVLLSN Y
Sbjct: 254 PMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQ 313
Query: 414 XVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAP 473
+R M + + K PG S+V + VHEF+ GD SHPQ + I L + ++ GY P
Sbjct: 314 KIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVP 373
Query: 474 NTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVS 533
S+V D++EEEKE+++ YHSEK+A+AF+L+ +R I V+KNLR+C DCH +K VS
Sbjct: 374 QISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVS 433
Query: 534 GIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
+++++I++RDR+RFHHF GSCSC D+W
Sbjct: 434 KVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 95/170 (55%), Gaps = 3/170 (1%)
Query: 203 LGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSL 262
+ + LG +H+ + R+G G + + +L+++Y+ CG + + KVF++MP +++V W S+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 263 ITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYG 322
I G A +G+ EAL + +M G++PDG + L AC+ G + G RV M + G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-IKVG 119
Query: 323 VYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL-GACVN 371
+ L ++DL R G + EA ++M + NSV W +L+ G VN
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVN 168
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 193/441 (43%), Positives = 288/441 (65%), Gaps = 6/441 (1%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM-QLGDP 182
A+I Y G++ A LFD M +RD+ SW+ +I + +G+P +AL LFQ++ G P
Sbjct: 196 TAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKP 255
Query: 183 QVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSID 242
+ D + +++ +SA S +GALE G W+H +++ + + L V + T LI+MYS+CGS++
Sbjct: 256 K----PDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLE 311
Query: 243 RSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE-AGLRPDGAAYTAALVAC 301
+V VF + P +++V W ++I G A+HG S++ALR F +M+ GL+P + L AC
Sbjct: 312 EAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQAC 371
Query: 302 SHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVI 361
+H GLV +G R+FESM EYG+ P +EHYGC+V LLGRAG L A++ +++M + +SV+
Sbjct: 372 AHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVL 431
Query: 362 WRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRE 421
W ++LG+C H D VL ++ E + L+ + G YVLLSN Y VRN M+E
Sbjct: 432 WSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKE 491
Query: 422 NRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHD 481
IVKEPG+S + I+ VHEF +GD H + +EI L + + IK GY PNT++VL D
Sbjct: 492 KGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQD 551
Query: 482 IQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDII 541
++E EKE SL HSE+LA+A+ L+ + +++ KNLR+C DCH+ K +S I + I+
Sbjct: 552 LEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIV 611
Query: 542 IRDRNRFHHFSKGSCSCGDFW 562
+RDRNRFHHF+ GSCSCGDFW
Sbjct: 612 MRDRNRFHHFTDGSCSCGDFW 632
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 117/276 (42%), Gaps = 42/276 (15%)
Query: 129 AYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPEST 188
AY S G + ++ LF + DL ++ I + NG +A L+ Q+ + E T
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 189 DGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVF 248
++ S + + G +H ++ + GLG+ + T L+++Y++ G + + KVF
Sbjct: 133 FSSLLKSC--------STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVF 184
Query: 249 EEMPHR-------------------------------NVVTWTSLITGLAVHGRSREALR 277
+ MP R ++V+W +I G A HG +AL
Sbjct: 185 DRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALM 244
Query: 278 AFRDMREAGL-RPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDL 336
F+ + G +PD AAL ACS G +E G + ++S + ++ ++D+
Sbjct: 245 LFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSR-IRLNVKVCTGLIDM 303
Query: 337 LGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNH 372
+ G L EA D P K + V W ++ H
Sbjct: 304 YSKCGSLEEAVLVFNDTPRK-DIVAWNAMIAGYAMH 338
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 5/154 (3%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N+ V LI+ Y GSL AV +F++ P++D+ +W+ +I + +GY +AL LF +MQ
Sbjct: 293 NVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQ 352
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYI-RRAGLGLTVPLGTALINMYSR 237
P TD + + + A + G + GI + + + G+ + L+++ R
Sbjct: 353 GITGLQP--TD-ITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGR 409
Query: 238 CGSIDRSVKVFEEMP-HRNVVTWTSLITGLAVHG 270
G + R+ + + M + V W+S++ +HG
Sbjct: 410 AGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/596 (37%), Positives = 324/596 (54%), Gaps = 48/596 (8%)
Query: 6 NLHATLIKTGQHNNPL---SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIR 62
+LH +K+ ++ SL + C +L SA V D +N++I
Sbjct: 152 SLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSA------CKVFTTIKEKDVVSWNSMIN 205
Query: 63 HLALH-SPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXX---XXXXXXXXXGFAS 118
SP A LF M V H T +
Sbjct: 206 GFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNV 265
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFD-------------------------------EMP 147
N+ + NA+++ Y GS+ A LFD MP
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 148 QRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALE 207
Q+D+ +W+ LI + NG P EAL +F ++QL Q + + ++S +SA + +GALE
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQL---QKNMKLNQITLVSTLSACAQVGALE 382
Query: 208 LGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLA 267
LG W+H+YI++ G+ + + +ALI+MYS+CG +++S +VF + R+V W+++I GLA
Sbjct: 383 LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442
Query: 268 VHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPML 327
+HG EA+ F M+EA ++P+G +T ACSH GLV++ +F M S YG+ P
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502
Query: 328 EHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNE 387
+HY C+VD+LGR+G L +A KF+E MPI P++ +W LLGAC H +L LAE A R+ E
Sbjct: 503 KHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLE 562
Query: 388 LDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDN 447
L+P +DG +VLLSN Y +R MR + KEPG S + ID ++HEF+SGDN
Sbjct: 563 LEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDN 622
Query: 448 SHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHDIQEEE-KEHSLGYHSEKLAVAFVLLY 506
+HP E++ L V++ +K GY P S VL I+EEE KE SL HSEKLA+ + L+
Sbjct: 623 AHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLIS 682
Query: 507 HRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
K IRVIKNLR+C DCHS K +S ++D++II+RDR RFHHF G CSC DFW
Sbjct: 683 TEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 184/412 (44%), Gaps = 50/412 (12%)
Query: 1 MNRVYNLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTV 60
+ ++ H +I+TG ++P S F A L S + YA V P P+ +NT+
Sbjct: 43 LRQLKQTHGHMIRTGTFSDPYSASKLFAMAA-LSSFASLEYARKVFDEIPKPNSFAWNTL 101
Query: 61 IRHLALH-SPTLATTLFSHM-HRTGVTVDHFTFPLIXXXXXXXXXXXXXXX---XXXXXG 115
IR A P L+ F M + + +TFP +
Sbjct: 102 IRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA 161
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
S++FV N+LI+ Y S G L+ A +F + ++D+ SW+++I F G P +AL LF+
Sbjct: 162 VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFK 221
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMY 235
+M+ D + V M+ V+SA + + LE G V +YI + + + L A+++MY
Sbjct: 222 KMESEDVKASH----VTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 236 SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAV--------------------------- 268
++CGSI+ + ++F+ M ++ VTWT+++ G A+
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 269 ----HGRSREALRAFRDMR-EAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGV 323
+G+ EAL F +++ + ++ + + L AC+ G +E G R S ++G+
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGI 396
Query: 324 YPMLEHYGCMVDLLGRAGML---LEAFKFVEDMPIKPNSVIWRTLLGACVNH 372
++ + + G L E F VE K + +W ++G H
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVE----KRDVFVWSAMIGGLAMH 444
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 145/350 (41%), Gaps = 44/350 (12%)
Query: 49 FPIPD-PTPYNTVIRHLALHSPTLATTLFS----HMHRTGVTVDHFTFPLIXXXXXXXXX 103
F P+ PT N RH++L ++ HM RTG D ++
Sbjct: 18 FSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYS------------- 64
Query: 104 XXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTN 163
AS +F AL S SL A +FDE+P+ + +W+TLI + +
Sbjct: 65 -------------ASKLFAMAAL----SSFASLEYARKVFDEIPKPNSFAWNTLIRAYAS 107
Query: 164 NGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGL 223
P ++ F M P ++ + VSSL LG +H ++ +G
Sbjct: 108 GPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLS---LGQSLHGMAVKSAVGS 164
Query: 224 TVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMR 283
V + +LI+ Y CG +D + KVF + ++VV+W S+I G G +AL F+ M
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 284 EAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGML 343
++ L AC+ +E G +V S E V L M+D+ + G +
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVC-SYIEENRVNVNLTLANAMLDMYTKCGSI 283
Query: 344 LEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHD 393
+A + + M K N V W T+L D E A+E +N + P D
Sbjct: 284 EDAKRLFDAMEEKDN-VTWTTMLDGYAISEDY---EAAREVLNSM-PQKD 328
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 404 bits (1038), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/538 (37%), Positives = 313/538 (58%), Gaps = 9/538 (1%)
Query: 30 CAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLA-LHSPTLATTLFSHMHRTGVTVDH 88
C E P+ + SYA + PD +N++ R + +P +LF + G+ D+
Sbjct: 70 CTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDN 129
Query: 89 FTFPLIXXXXXXXXXXXXXXXX---XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDE 145
+TFP + G N++V LIN Y ++ A +FD
Sbjct: 130 YTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDR 189
Query: 146 MPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGA 205
+ + + ++ +I + P EALSLF++MQ G P + + +LSV+S+ + LG+
Sbjct: 190 IVEPCVVCYNAMITGYARRNRPNEALSLFREMQ-GKYLKP---NEITLLSVLSSCALLGS 245
Query: 206 LELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITG 265
L+LG W+H Y ++ V + TALI+M+++CGS+D +V +FE+M +++ W+++I
Sbjct: 246 LDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVA 305
Query: 266 LAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYP 325
A HG++ +++ F MR ++PD + L ACSH G VE+G + F M S++G+ P
Sbjct: 306 YANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVP 365
Query: 326 MLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERV 385
++HYG MVDLL RAG L +A++F++ +PI P ++WR LL AC +HN+L LAEK ER+
Sbjct: 366 SIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERI 425
Query: 386 NELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSG 445
ELD H GDYV+LSN Y +R M++ + VK PG S + ++ VVHEF SG
Sbjct: 426 FELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSG 485
Query: 446 DNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLH-DIQEEEKEHSLGYHSEKLAVAFVL 504
D ++ + L +V +KL GY P+TS V+H ++ ++EKE +L YHSEKLA+ F L
Sbjct: 486 DGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGL 545
Query: 505 LYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
L IRV+KNLR+C DCH+ K +S IF + +++RD RFHHF G CSCGDFW
Sbjct: 546 LNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/564 (39%), Positives = 314/564 (55%), Gaps = 8/564 (1%)
Query: 6 NLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLA 65
+HA L++T N F R A +Y+ V + P + NT+IR +
Sbjct: 29 QIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAFS 88
Query: 66 L-HSPTLATTLFSHMHRTGVTVDH---FTFPL-IXXXXXXXXXXXXXXXXXXXXGFASNI 120
L +P LF + R + +F L GF S+
Sbjct: 89 LSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDS 148
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLG 180
+ L++ Y + + A +FDE+P+RD SW+ L C+ N + L LF +M+
Sbjct: 149 LLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMK-N 207
Query: 181 DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGS 240
D DGV L + A ++LGAL+ G VH +I GL + L L++MYSRCGS
Sbjct: 208 DVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGS 267
Query: 241 IDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVA 300
+D++ +VF M RNVV+WT+LI+GLA++G +EA+ AF +M + G+ P+ T L A
Sbjct: 268 MDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSA 327
Query: 301 CSHGGLVEDGWRVFESMRS-EYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNS 359
CSH GLV +G F+ MRS E+ + P L HYGC+VDLLGRA +L +A+ ++ M +KP+S
Sbjct: 328 CSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDS 387
Query: 360 VIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSM 419
IWRTLLGAC H D+ L E+ + EL GDYVLL N Y +R+ M
Sbjct: 388 TIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLM 447
Query: 420 RENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVL 479
+E RI +PG S + + VHEF+ D SHP+ EEI K L + +K+ GY +S L
Sbjct: 448 KEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSEL 507
Query: 480 HDIQ-EEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDK 538
H+++ EEEK ++L YHSEKLA+AF +L IRV KNLR C DCH+F K VS ++D+
Sbjct: 508 HNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDR 567
Query: 539 DIIIRDRNRFHHFSKGSCSCGDFW 562
+I+RDR+RFHHF GSCSC DFW
Sbjct: 568 IVIVRDRSRFHHFKGGSCSCNDFW 591
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/561 (37%), Positives = 311/561 (55%), Gaps = 14/561 (2%)
Query: 6 NLHATLIKTGQHNNPLSLRTF---FLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIR 62
+H+ KTG +++ L F + +C ++ +A+ F PD YN +I
Sbjct: 242 QIHSLATKTGCYSHDYVLTGFISLYSKCGKI------KMGSALFREFRKPDIVAYNAMIH 295
Query: 63 HLALHSPT-LATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXXXXXGFASNIF 121
+ T L+ +LF + +G + T + F S+
Sbjct: 296 GYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHAS 355
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
V AL Y + A LFDE P++ L SW+ +I +T NG +A+SLF++MQ +
Sbjct: 356 VSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSE 415
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSI 241
S + V + ++SA + LGAL LG WVH +R ++ + TALI MY++CGSI
Sbjct: 416 F----SPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSI 471
Query: 242 DRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVAC 301
+ ++F+ M +N VTW ++I+G +HG+ +EAL F +M +G+ P + L AC
Sbjct: 472 AEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYAC 531
Query: 302 SHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVI 361
SH GLV++G +F SM YG P ++HY CMVD+LGRAG L A +F+E M I+P S +
Sbjct: 532 SHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSV 591
Query: 362 WRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRE 421
W TLLGAC H D LA E++ ELDP + G +VLLSN + VR + ++
Sbjct: 592 WETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKK 651
Query: 422 NRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHD 481
++ K PG +++ I + H F SGD SHPQ +EI + L + ++ GY P T LHD
Sbjct: 652 RKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHD 711
Query: 482 IQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDII 541
++EEE+E + HSE+LA+AF L+ IR+IKNLR+C DCH+ K +S I ++ I+
Sbjct: 712 VEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIV 771
Query: 542 IRDRNRFHHFSKGSCSCGDFW 562
+RD NRFHHF G CSCGD+W
Sbjct: 772 VRDANRFHHFKDGVCSCGDYW 792
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/420 (20%), Positives = 167/420 (39%), Gaps = 47/420 (11%)
Query: 8 HATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLALH 67
HA +I G N+ L R ++L + YA + L PD +N ++R +++
Sbjct: 40 HAQIILHGFRNDISLLTKLTQRLSDLGAI---YYARDIFLSVQRPDVFLFNVLMRGFSVN 96
Query: 68 -SPTLATTLFSHMHR-TGVTVDHFTFPLIXXXXXXXXXXXXXXX---XXXXXGFASNIFV 122
SP + ++F+H+ + T + + T+ G S + +
Sbjct: 97 ESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLL 156
Query: 123 QNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDP 182
+ ++ Y + A +FD MP++D W+T+I + N E++ +F+ +
Sbjct: 157 GSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL----- 211
Query: 183 QVPEST---DGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
+ ES D +L ++ AV+ L L LG+ +H+ + G + T I++YS+CG
Sbjct: 212 -INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTA--- 296
I +F E ++V + ++I G +G + +L F+++ +G R + +
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP 330
Query: 297 -----ALVACSHGGLVEDGW-----------------RVFESMRSEYGVYP--MLEHYGC 332
L+ HG ++ + ES R + P L +
Sbjct: 331 VSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNA 390
Query: 333 MVDLLGRAGMLLEAFKFVEDM---PIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELD 389
M+ + G+ +A +M PN V +L AC L L + + V D
Sbjct: 391 MISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTD 450
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/450 (43%), Positives = 276/450 (61%), Gaps = 10/450 (2%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N+FV A+++ Y G L+ A +FD+ ++DL W+T+I + + YP EAL +F++M
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC 336
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+ D V M SVISA ++LG L+ WVH+ I GL + + ALINMY++C
Sbjct: 337 CSGIK----PDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKC 392
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G +D + VFE+MP RNVV+W+S+I L++HG + +AL F M++ + P+ + L
Sbjct: 393 GGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVL 452
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
CSH GLVE+G ++F SM EY + P LEHYGCMVDL GRA +L EA + +E MP+ N
Sbjct: 453 YGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASN 512
Query: 359 SVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNS 418
VIW +L+ AC H +L L + A +R+ EL+P HDG VL+SN Y +R
Sbjct: 513 VVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRV 572
Query: 419 MRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSV 478
M E + KE GLS + + HEF+ GD H Q EI L VV +KL GY P+ SV
Sbjct: 573 MEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSV 632
Query: 479 LHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRK------AIRVIKNLRICYDCHSFMKHV 532
L D++EEEK+ + +HSEKLA+ F L+ + IR++KNLR+C DCH F K V
Sbjct: 633 LVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLV 692
Query: 533 SGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
S +++++II+RDR RFH + G CSC D+W
Sbjct: 693 SKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 182/410 (44%), Gaps = 45/410 (10%)
Query: 1 MNRVYNLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIP-DPTPYNT 59
+N + LHA +++T ++ L +F + S+ SYA V P P + +N
Sbjct: 25 LNHIKQLHAHILRTVINHK---LNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNP 81
Query: 60 VIRHLALHSPTLATTLFSHMHR-TGVTVDHFTF-PLIXXXXXXXXXXXXXXXXXXXXGFA 117
+R L+ S AT LF R G +D F+F P++ A
Sbjct: 82 FLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIA 141
Query: 118 S--NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
+ + FV+ ++ Y S G +N A ++FDEM RD+ +W+T+I + G EA LF+
Sbjct: 142 TLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFE 201
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM- 234
+M+ D V D +++ +++SA G + ++ ++ + + L TAL+ M
Sbjct: 202 EMK--DSNV--MPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMY 257
Query: 235 ------------------------------YSRCGSIDRSVKVFEEMPHRNVVTWTSLIT 264
YS+CG +D + +F++ +++V WT++I+
Sbjct: 258 AGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMIS 317
Query: 265 GLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVY 324
+EALR F +M +G++PD + + + AC++ G+++ V + G+
Sbjct: 318 AYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN-GLE 376
Query: 325 PMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHND 374
L ++++ + G L E MP + N V W +++ A H +
Sbjct: 377 SELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGE 425
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 13/207 (6%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G S + + NALIN Y G L+ +F++MP+R++ SWS++I + +G ++ALSLF
Sbjct: 374 GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLF 433
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLG--TALI 232
+M+ + + E T + V+ S G +E G + A + +T L ++
Sbjct: 434 ARMKQENVEPNEVT----FVGVLYGCSHSGLVEEGKKIFASMTDE-YNITPKLEHYGCMV 488
Query: 233 NMYSRCGSIDRSVKVFEEMP-HRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDG 291
+++ R + +++V E MP NVV W SL++ +HG L F R L PD
Sbjct: 489 DLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELE--LGKFAAKRILELEPD- 545
Query: 292 AAYTAALVACSHGGLVEDGWRVFESMR 318
+ ALV S+ E W ++R
Sbjct: 546 --HDGALVLMSNIYAREQRWEDVRNIR 570
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 400 bits (1029), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/593 (34%), Positives = 324/593 (54%), Gaps = 40/593 (6%)
Query: 6 NLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLA 65
+HA ++KTG + ++ F C S+D YA V F PD +N +IR +
Sbjct: 32 QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFS 91
Query: 66 L-HSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXX---XXXXXGFASNIF 121
P + L+ M + + +TFP + G+ ++++
Sbjct: 92 CSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVY 151
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNG---------------- 165
N+LIN+Y +G+ LA LFD +P+ D SW+++I + G
Sbjct: 152 AVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKN 211
Query: 166 ---------------YPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGI 210
EAL LF +MQ D + D V + + +SA + LGALE G
Sbjct: 212 AISWTTMISGYVQADMNKEALQLFHEMQNSDVE----PDNVSLANALSACAQLGALEQGK 267
Query: 211 WVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHG 270
W+H+Y+ + + + LG LI+MY++CG ++ +++VF+ + ++V WT+LI+G A HG
Sbjct: 268 WIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHG 327
Query: 271 RSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHY 330
REA+ F +M++ G++P+ +TA L ACS+ GLVE+G +F SM +Y + P +EHY
Sbjct: 328 HGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHY 387
Query: 331 GCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDP 390
GC+VDLLGRAG+L EA +F+++MP+KPN+VIW LL AC H ++ L E+ E + +DP
Sbjct: 388 GCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDP 447
Query: 391 HHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHP 450
+H G YV +N + R M+E + K PG S + ++ HEF++GD SHP
Sbjct: 448 YHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHP 507
Query: 451 QWEEIMKFLVSVVDTIKLGGYAPNTSSVLHD-IQEEEKEHSLGYHSEKLAVAFVLLYHRD 509
+ E+I + ++ GY P +L D + ++E+E + HSEKLA+ + L+ +
Sbjct: 508 EIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKP 567
Query: 510 RKAIRVIKNLRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
IR++KNLR+C DCH K +S I+ +DI++RDR RFHHF G CSCGD+W
Sbjct: 568 GTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/538 (36%), Positives = 313/538 (58%), Gaps = 7/538 (1%)
Query: 29 RCAELPSADTASYAAAVLLRFPIPDPTPYNTVIR-HLALHSPTLATTLFSHMHRTGVTVD 87
+CA ++ +YAA++ P +NT+IR ++ + S A ++ M + G D
Sbjct: 72 KCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPD 131
Query: 88 HFTFPLIXXXXXXXXXXXXXXX---XXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFD 144
+FT+P + G +++FVQN+LIN YG G + L+ +F+
Sbjct: 132 NFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFE 191
Query: 145 EMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLG 204
++ + ASWS+++ G +E L LF+ M + + G M+S + A ++ G
Sbjct: 192 KLESKTAASWSSMVSARAGMGMWSECLLLFRGM-CSETNLKAEESG--MVSALLACANTG 248
Query: 205 ALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLIT 264
AL LG+ +H ++ R L + + T+L++MY +CG +D+++ +F++M RN +T++++I+
Sbjct: 249 ALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMIS 308
Query: 265 GLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVY 324
GLA+HG ALR F M + GL PD Y + L ACSH GLV++G RVF M E V
Sbjct: 309 GLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVE 368
Query: 325 PMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKER 384
P EHYGC+VDLLGRAG+L EA + ++ +PI+ N VIWRT L C ++ L + A +
Sbjct: 369 PTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQE 428
Query: 385 VNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVS 444
+ +L H+ GDY+L+SN Y R + + + PG S+V + H FVS
Sbjct: 429 LLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVS 488
Query: 445 GDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVL 504
D SHP+ +EI K L + +K GY+P+ + +L ++ EEEK+ L HS+K+A+AF L
Sbjct: 489 QDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGL 548
Query: 505 LYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
LY I++ +NLR+C DCH++ K +S I++++I++RDRNRFH F G+CSC D+W
Sbjct: 549 LYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/443 (43%), Positives = 270/443 (60%), Gaps = 3/443 (0%)
Query: 120 IFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
+ N+++ Y +G ++ A F+ MP++++ SW+T+I EA+ +F MQ
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ- 461
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
Q + DGV M+S+ SA LGAL+L W++ YI + G+ L V LGT L++M+SRCG
Sbjct: 462 --SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
+ ++ +F + +R+V WT+ I +A+ G + A+ F DM E GL+PDG A+ AL
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 300 ACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNS 359
ACSHGGLV+ G +F SM +GV P HYGCMVDLLGRAG+L EA + +EDMP++PN
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 360 VIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSM 419
VIW +LL AC ++ +A A E++ L P G YVLLSN Y VR SM
Sbjct: 640 VIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSM 699
Query: 420 RENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVL 479
+E + K PG S + I HEF SGD SHP+ I L V G+ P+ S+VL
Sbjct: 700 KEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVL 759
Query: 480 HDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKD 539
D+ E+EK L HSEKLA+A+ L+ IR++KNLR+C DCHSF K S +++++
Sbjct: 760 MDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNRE 819
Query: 540 IIIRDRNRFHHFSKGSCSCGDFW 562
II+RD NRFH+ +G CSCGDFW
Sbjct: 820 IILRDNNRFHYIRQGKCSCGDFW 842
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 188/397 (47%), Gaps = 32/397 (8%)
Query: 7 LHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPT-PYNTVIRHLA 65
H +L K G N+ ++ R EL + ++ S+A V YN++IR A
Sbjct: 51 FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYA 110
Query: 66 LHS-PTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX---XXXXGFASNIF 121
A LF M +G++ D +TFP G+A ++F
Sbjct: 111 SSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLF 170
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
VQN+L++ Y G L+ A +FDEM +R++ SW+++I + + +A+ LF +M +
Sbjct: 171 VQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDE 230
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSI 241
P S V M+ VISA + L LE G V+A+IR +G+ + + +AL++MY +C +I
Sbjct: 231 EVTPNS---VTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 242 DRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVAC 301
D + ++F+E N+ ++ + G +REAL F M ++G+RPD + +A+ +C
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 302 S-----------HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFV 350
S HG ++ +G+ ++++ ++D+ + AF+
Sbjct: 348 SQLRNILWGKSCHGYVLRNGFESWDNI------------CNALIDMYMKCHRQDTAFRIF 395
Query: 351 EDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNE 387
+ M K V W +++ V + ++ A + E + E
Sbjct: 396 DRMSNK-TVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 8/209 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G N + +AL++ Y ++++A LFDE +L + + + G EAL +F
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M D V D + MLS IS+ S L + G H Y+ R G + ALI+M
Sbjct: 326 NLMM--DSGV--RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDM 381
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y +C D + ++F+ M ++ VVTW S++ G +G A F M E + ++
Sbjct: 382 YMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSW 437
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGV 323
+ G L E+ VF SM+S+ GV
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/448 (43%), Positives = 278/448 (62%), Gaps = 6/448 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G S++FV++ALI+ + G A+ +FDEM D W+++I F N AL LF
Sbjct: 189 GLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELF 248
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
++M+ ++T + SV+ A + L LELG+ H +I + L L AL++M
Sbjct: 249 KRMKRAGFIAEQAT----LTSVLRACTGLALLELGMQAHVHIVKYDQDLI--LNNALVDM 302
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y +CGS++ +++VF +M R+V+TW+++I+GLA +G S+EAL+ F M+ +G +P+
Sbjct: 303 YCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITI 362
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
L ACSH GL+EDGW F SM+ YG+ P+ EHYGCM+DLLG+AG L +A K + +M
Sbjct: 363 VGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEME 422
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
+P++V WRTLLGAC ++VLAE A ++V LDP G Y LLSN Y
Sbjct: 423 CEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEE 482
Query: 415 VRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPN 474
+R MR+ I KEPG S + +++ +H F+ GDNSHPQ E+ K L ++ + GY P
Sbjct: 483 IRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPE 542
Query: 475 TSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSG 534
T+ VL D++ E+ E SL +HSEKLA+AF L+ K IR+ KNLRIC DCH F K S
Sbjct: 543 TNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASK 602
Query: 535 IFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
+ + I+IRD R+HHF G CSCGD+W
Sbjct: 603 LEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 125/249 (50%), Gaps = 11/249 (4%)
Query: 120 IFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
+F+ N LIN Y LN A LFD+MPQR++ SW+T+I ++ +AL L M L
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLM-L 154
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
D P +L + +S + L GI + GL V + +ALI+++++ G
Sbjct: 155 RDNVRPNVYTYSSVLRSCNGMSDVRMLHCGII------KEGLESDVFVRSALIDVFAKLG 208
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
+ ++ VF+EM + + W S+I G A + RS AL F+ M+ AG + A T+ L
Sbjct: 209 EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268
Query: 300 ACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNS 359
AC+ L+E G + + +Y +L + +VD+ + G L +A + M + +
Sbjct: 269 ACTGLALLELGMQAHVHI-VKYDQDLILNN--ALVDMYCKCGSLEDALRVFNQMK-ERDV 324
Query: 360 VIWRTLLGA 368
+ W T++
Sbjct: 325 ITWSTMISG 333
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/570 (36%), Positives = 316/570 (55%), Gaps = 16/570 (2%)
Query: 1 MNRVYNLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTV 60
+ ++ +HA LI TG + SL T + A SA +Y + L P+PD +N+V
Sbjct: 22 VKQLQQVHAHLIVTG-YGRSRSLLTKLITLA--CSARAIAYTHLLFLSVPLPDDFLFNSV 78
Query: 61 IRHLA-LHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX---XXXXGF 116
I+ + L P + M + V+ ++TF + GF
Sbjct: 79 IKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGF 138
Query: 117 ASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQ 176
+ +VQ AL+ Y G + A +FD MP++ + +W++L+ F NG EA+ +F Q
Sbjct: 139 GLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQ 198
Query: 177 MQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYS 236
M+ + D +S++SA + GA+ LG WVH YI GL L V LGTALIN+YS
Sbjct: 199 MR----ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYS 254
Query: 237 RCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE-AGLRPDGAAYT 295
RCG + ++ +VF++M NV WT++I+ HG ++A+ F M + G P+ +
Sbjct: 255 RCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFV 314
Query: 296 AALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPI 355
A L AC+H GLVE+G V++ M Y + P +EH+ CMVD+LGRAG L EA+KF+ +
Sbjct: 315 AVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDA 374
Query: 356 KPNSV---IWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXX 412
+ +W +LGAC H + L + +R+ L+P + G +V+LSN Y
Sbjct: 375 TGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEV 434
Query: 413 XXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYA 472
+R+ M N + K+ G SV+ ++ + F GD SH + EI ++L +++ K GYA
Sbjct: 435 SHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYA 494
Query: 473 PNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHV 532
P + V+H ++EEEKE +L YHSEKLAVAF LL D AI ++KNLRIC DCHS K++
Sbjct: 495 PVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICEDCHSAFKYI 553
Query: 533 SGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
S + ++ I +RD+ RFHHF GSCSC D+W
Sbjct: 554 SIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/565 (36%), Positives = 311/565 (55%), Gaps = 15/565 (2%)
Query: 7 LHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLAL 66
+H ++ G +P ++L S D YA V + +N + R L L
Sbjct: 99 VHRHILDNGSDQDPFLATKLIGMYSDLGSVD---YARKVFDKTRKRTIYVWNALFRALTL 155
Query: 67 --HSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX-------XXXXGFA 117
H + L+ M+R GV D FT+ + G++
Sbjct: 156 AGHGEEV-LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYS 214
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
S++++ L++ Y G ++ A ++F MP R++ SWS +I C+ NG EAL F++M
Sbjct: 215 SHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM 274
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
S + V M+SV+ A +SL ALE G +H YI R GL +P+ +AL+ MY R
Sbjct: 275 MRETKD--SSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGR 332
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
CG ++ +VF+ M R+VV+W SLI+ VHG ++A++ F +M G P + +
Sbjct: 333 CGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSV 392
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
L ACSH GLVE+G R+FE+M ++G+ P +EHY CMVDLLGRA L EA K V+DM +P
Sbjct: 393 LGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEP 452
Query: 358 NSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRN 417
+W +LLG+C H ++ LAE+A R+ L+P + G+YVLL++ Y V+
Sbjct: 453 GPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKK 512
Query: 418 SMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSS 477
+ + K PG + + + ++ FVS D +P E+I FLV + + +K GY P T
Sbjct: 513 LLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKG 572
Query: 478 VLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFD 537
VL++++ EEKE + HSEKLA+AF L+ + IR+ KNLR+C DCH F K +S +
Sbjct: 573 VLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFME 632
Query: 538 KDIIIRDRNRFHHFSKGSCSCGDFW 562
K+I++RD NRFH F G CSCGD+W
Sbjct: 633 KEILVRDVNRFHRFKNGVCSCGDYW 657
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/442 (43%), Positives = 269/442 (60%), Gaps = 3/442 (0%)
Query: 120 IFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
+ N+++ Y +G ++ A F+ MP++++ SW+T+I EA+ +F MQ
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ- 461
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
Q + DGV M+S+ SA LGAL+L W++ YI + G+ L V LGT L++M+SRCG
Sbjct: 462 --SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
+ ++ +F + +R+V WT+ I +A+ G + A+ F DM E GL+PDG A+ AL
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 300 ACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNS 359
ACSHGGLV+ G +F SM +GV P HYGCMVDLLGRAG+L EA + +EDMP++PN
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 360 VIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSM 419
VIW +LL AC ++ +A A E++ L P G YVLLSN Y VR SM
Sbjct: 640 VIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSM 699
Query: 420 RENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVL 479
+E + K PG S + I HEF SGD SHP+ I L V G+ P+ S+VL
Sbjct: 700 KEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVL 759
Query: 480 HDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKD 539
D+ E+EK L HSEKLA+A+ L+ IR++KNLR+C DCHSF K S +++++
Sbjct: 760 MDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNRE 819
Query: 540 IIIRDRNRFHHFSKGSCSCGDF 561
II+RD NRFH+ +G CSCGDF
Sbjct: 820 IILRDNNRFHYIRQGKCSCGDF 841
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 188/397 (47%), Gaps = 32/397 (8%)
Query: 7 LHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPT-PYNTVIRHLA 65
H +L K G N+ ++ R EL + ++ S+A V YN++IR A
Sbjct: 51 FHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYA 110
Query: 66 LHS-PTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX---XXXXGFASNIF 121
A LF M +G++ D +TFP G+A ++F
Sbjct: 111 SSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLF 170
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
VQN+L++ Y G L+ A +FDEM +R++ SW+++I + + +A+ LF +M +
Sbjct: 171 VQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDE 230
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSI 241
P S V M+ VISA + L LE G V+A+IR +G+ + + +AL++MY +C +I
Sbjct: 231 EVTPNS---VTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 242 DRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVAC 301
D + ++F+E N+ ++ + G +REAL F M ++G+RPD + +A+ +C
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 302 S-----------HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFV 350
S HG ++ +G+ ++++ ++D+ + AF+
Sbjct: 348 SQLRNILWGKSCHGYVLRNGFESWDNI------------CNALIDMYMKCHRQDTAFRIF 395
Query: 351 EDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNE 387
+ M K V W +++ V + ++ A + E + E
Sbjct: 396 DRMSNK-TVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 8/209 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G N + +AL++ Y ++++A LFDE +L + + + G EAL +F
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M D V D + MLS IS+ S L + G H Y+ R G + ALI+M
Sbjct: 326 NLMM--DSGV--RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDM 381
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y +C D + ++F+ M ++ VVTW S++ G +G A F M E + ++
Sbjct: 382 YMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSW 437
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGV 323
+ G L E+ VF SM+S+ GV
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/444 (42%), Positives = 272/444 (61%), Gaps = 4/444 (0%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N+ N +I Y G ++ A +LFD+MP+RD SW+ +I ++ +G+ EAL LF QM+
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
++ S+ S +S + + ALELG +H + + G +G AL+ MY +C
Sbjct: 402 REGGRLNRSS----FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 457
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
GSI+ + +F+EM +++V+W ++I G + HG ALR F M+ GL+PD A A L
Sbjct: 458 GSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVL 517
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
ACSH GLV+ G + F +M +YGV P +HY CMVDLLGRAG+L +A +++MP +P+
Sbjct: 518 SACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPD 577
Query: 359 SVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNS 418
+ IW TLLGA H + LAE A +++ ++P + G YVLLSN Y +R
Sbjct: 578 AAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVR 637
Query: 419 MRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSV 478
MR+ + K PG S + I H F GD HP+ +EI FL + +K GY TS V
Sbjct: 638 MRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVV 697
Query: 479 LHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDK 538
LHD++EEEKE + YHSE+LAVA+ ++ + IRVIKNLR+C DCH+ +K+++ I +
Sbjct: 698 LHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGR 757
Query: 539 DIIIRDRNRFHHFSKGSCSCGDFW 562
II+RD NRFHHF GSCSCGD+W
Sbjct: 758 LIILRDNNRFHHFKDGSCSCGDYW 781
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 110/257 (42%), Gaps = 16/257 (6%)
Query: 25 TFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLALHSPTL-ATTLFSHMHRTG 83
T + +C ++ S A + + P DP + +I + + A LF M R G
Sbjct: 351 TGYAQCGKI------SEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
Query: 84 VTVDHFTFPLIXXXXXXXXXXXXXXX---XXXXXGFASNIFVQNALINAYGSSGSLNLAV 140
++ +F G+ + FV NAL+ Y GS+ A
Sbjct: 405 GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAN 464
Query: 141 HLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAV 200
LF EM +D+ SW+T+I ++ +G+ AL F+ M+ + ++T M++V+SA
Sbjct: 465 DLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT----MVAVLSAC 520
Query: 201 SSLGALELG-IWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR-NVVT 258
S G ++ G + + + G+ ++++ R G ++ + + + MP +
Sbjct: 521 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI 580
Query: 259 WTSLITGLAVHGRSREA 275
W +L+ VHG + A
Sbjct: 581 WGTLLGASRVHGNTELA 597
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 119/270 (44%), Gaps = 28/270 (10%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N +I Y + +L A LF+ MP+RD+ SW+T++ + NG +A S+F +M
Sbjct: 130 NVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM------ 183
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
PE D V +++SA +E + + R L L+ + + I
Sbjct: 184 -PEKND-VSWNALLSAYVQNSKMEEACML--FKSRENWALVS--WNCLLGGFVKKKKIVE 237
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSH 303
+ + F+ M R+VV+W ++ITG A G+ EA + F + D +TA +
Sbjct: 238 ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF----DESPVQDVFTWTAMVSGYIQ 293
Query: 304 GGLVEDGWRVFESM--RSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVED-MPIKPNSV 360
+VE+ +F+ M R+E ML Y G +E K + D MP + N
Sbjct: 294 NRMVEEARELFDKMPERNEVSWNAMLAGY--------VQGERMEMAKELFDVMPCR-NVS 344
Query: 361 IWRTLLGACVNHNDLVLAEKAKERVNELDP 390
W T++ + A+ +++ + DP
Sbjct: 345 TWNTMITGYAQCGKISEAKNLFDKMPKRDP 374
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 104/249 (41%), Gaps = 53/249 (21%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
S+I N I++Y +G N A+ +F MP+ S++ +I + NG A LF +M
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
PE + + + Y+R LG
Sbjct: 122 -------PERD----------------LVSWNVMIKGYVRNRNLG--------------- 143
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
++ ++FE MP R+V +W ++++G A +G +A F M E + ++ A
Sbjct: 144 -----KARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE----KNDVSWNAL 194
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
L A +E+ +F+S R + L + C++ + ++EA +F + M ++
Sbjct: 195 LSAYVQNSKMEEACMLFKS-RENWA----LVSWNCLLGGFVKKKKIVEARQFFDSMNVR- 248
Query: 358 NSVIWRTLL 366
+ V W T++
Sbjct: 249 DVVSWNTII 257
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/558 (35%), Positives = 313/558 (56%), Gaps = 40/558 (7%)
Query: 41 YAAAVLLRFPIPDPTPYNTVIRHLALHS-PTLATTLFSHMHRTGVTVDHFTFPLIXXXXX 99
YA + + P+ +N +IR + + P+ A ++ M ++ + D+ TFP +
Sbjct: 69 YAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASS 128
Query: 100 XXXXX---XXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLA----------------- 139
GF ++++V+N+L++ Y + G + A
Sbjct: 129 EMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTS 188
Query: 140 --------------VHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVP 185
+FDEMP R+L +WS +I + N +A+ LF+ M+
Sbjct: 189 MVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVAN 248
Query: 186 ESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSV 245
E+ +M+SVIS+ + LGALE G + Y+ ++ + + + LGTAL++M+ RCG I++++
Sbjct: 249 ET----VMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAI 304
Query: 246 KVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGG 305
VFE +P + ++W+S+I GLAVHG + +A+ F M G P +TA L ACSHGG
Sbjct: 305 HVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGG 364
Query: 306 LVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTL 365
LVE G ++E+M+ ++G+ P LEHYGC+VD+LGRAG L EA F+ M +KPN+ I L
Sbjct: 365 LVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGAL 424
Query: 366 LGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIV 425
LGAC + + +AE+ + ++ P H G YVLLSN Y +R+ M+E +
Sbjct: 425 LGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVK 484
Query: 426 KEPGLSVVHIDQVVHEFVSGDN-SHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHDIQE 484
K PG S++ ID +++F GD+ HP+ +I + ++ I+L GY NT D+ E
Sbjct: 485 KPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDE 544
Query: 485 EEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDIIIRD 544
EEKE S+ HSEKLA+A+ ++ + IR++KNLR+C DCH+ K +S ++ +++I+RD
Sbjct: 545 EEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRD 604
Query: 545 RNRFHHFSKGSCSCGDFW 562
RNRFHHF G CSC D+W
Sbjct: 605 RNRFHHFRNGVCSCRDYW 622
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 39/269 (14%)
Query: 136 LNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLS 195
L A +F ++ +L ++ LI CF+ P++A + QM L P D +
Sbjct: 67 LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQM-LKSRIWP---DNITFPF 122
Query: 196 VISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRN 255
+I A S + + +G H+ I R G V + +L++MY+ CG I + ++F +M R+
Sbjct: 123 LIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRD 182
Query: 256 VVTWTSLITG--------------------------LAVHGRSR-----EALRAFRDMRE 284
VV+WTS++ G + ++G ++ +A+ F M+
Sbjct: 183 VVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKR 242
Query: 285 AGLRPDGAAYTAALVACSHGGLVEDGWRVFE-SMRSEYGVYPMLEHYGCMVDLLGRAGML 343
G+ + + + +C+H G +E G R +E ++S V +L +VD+ R G +
Sbjct: 243 EGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILG--TALVDMFWRCGDI 300
Query: 344 LEAFKFVEDMPIKPNSVIWRTLLGACVNH 372
+A E +P + +S+ W +++ H
Sbjct: 301 EKAIHVFEGLP-ETDSLSWSSIIKGLAVH 328
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/444 (40%), Positives = 277/444 (62%), Gaps = 4/444 (0%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
+ + A++ A G + A LF+ MP+RD +W+ +I + G EAL++F MQ
Sbjct: 173 DFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQ 232
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
L +V +GV M+SV+SA + LGAL+ G W H+YI R + +TV L T L+++Y++C
Sbjct: 233 LEGVKV----NGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKC 288
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G ++++++VF M +NV TW+S + GLA++G + L F M++ G+ P+ + + L
Sbjct: 289 GDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVL 348
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
CS G V++G R F+SMR+E+G+ P LEHYGC+VDL RAG L +A ++ MP+KP+
Sbjct: 349 RGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPH 408
Query: 359 SVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNS 418
+ +W +LL A + +L L A +++ EL+ + G YVLLSN Y VR S
Sbjct: 409 AAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQS 468
Query: 419 MRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSV 478
M+ + K+PG SV+ ++ VHEF GD SHP++ +I + ++L GY +T+ V
Sbjct: 469 MKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPV 528
Query: 479 LHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDK 538
+ DI EEEKE +L HSEK A+AF ++ ++ IR++KNLR+C DCH +S IF++
Sbjct: 529 MFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNR 588
Query: 539 DIIIRDRNRFHHFSKGSCSCGDFW 562
+II+RDRNRFHHF G CSC FW
Sbjct: 589 EIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 37/263 (14%)
Query: 136 LNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQ-MQLGDPQVPESTDGVMML 194
L+ A + D + L + +++I + P ++ +++ + G+ P D +
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKP---DNYTVN 112
Query: 195 SVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMY------------------- 235
++ A + L E G+ VH R G + T LI++Y
Sbjct: 113 FLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCP 172
Query: 236 ------------SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMR 283
+RCG + + K+FE MP R+ + W ++I+G A G SREAL F M+
Sbjct: 173 DFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQ 232
Query: 284 EAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGML 343
G++ +G A + L AC+ G ++ G R S + + +VDL + G +
Sbjct: 233 LEGVKVNGVAMISVLSACTQLGALDQG-RWAHSYIERNKIKITVRLATTLVDLYAKCGDM 291
Query: 344 LEAFKFVEDMPIKPNSVIWRTLL 366
+A + M K N W + L
Sbjct: 292 EKAMEVFWGMEEK-NVYTWSSAL 313
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/442 (42%), Positives = 276/442 (62%), Gaps = 3/442 (0%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDP- 182
N+++NAY +G ++ A LFDEMP+R++ SWS LI + G EAL LF++MQL P
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191
Query: 183 QVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSID 242
+ + M +V+SA LGALE G WVHAYI + + + + LGTALI+MY++CGS++
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 251
Query: 243 RSVKVFEEM-PHRNVVTWTSLITGLAVHGRSREALRAFRDMREA-GLRPDGAAYTAALVA 300
R+ +VF + ++V ++++I LA++G + E + F +M + + P+ + L A
Sbjct: 252 RAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGA 311
Query: 301 CSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSV 360
C H GL+ +G F+ M E+G+ P ++HYGCMVDL GR+G++ EA F+ MP++P+ +
Sbjct: 312 CVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVL 371
Query: 361 IWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMR 420
IW +LL D+ E A +R+ ELDP + G YVLLSN Y +R+ M
Sbjct: 372 IWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEME 431
Query: 421 ENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLH 480
I K PG S V ++ VVHEFV GD S + E I L ++ ++ GY +T VL
Sbjct: 432 VKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLL 491
Query: 481 DIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDI 540
D+ E++KE +L YHSEKLA+AF L+ R +R+IKNLRIC DCH MK +S +F ++I
Sbjct: 492 DLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREI 551
Query: 541 IIRDRNRFHHFSKGSCSCGDFW 562
++RD NRFHHF GSCSC DFW
Sbjct: 552 VVRDCNRFHHFRDGSCSCRDFW 573
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 49/196 (25%)
Query: 225 VPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMR- 283
+P +++N Y++ G ID + K+F+EMP RNV++W+ LI G + G+ +EAL FR+M+
Sbjct: 128 LPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQL 187
Query: 284 ----EAGLRPDGAAYTAALVACSHGGLVEDG-W--------------------------- 311
EA +RP+ + L AC G +E G W
Sbjct: 188 PKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKC 247
Query: 312 -------RVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP----IKPNSV 360
RVF ++ S+ V + Y M+ L G+ E F+ +M I PNSV
Sbjct: 248 GSLERAKRVFNALGSKKDV----KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSV 303
Query: 361 IWRTLLGACVNHNDLV 376
+ +LGACV H L+
Sbjct: 304 TFVGILGACV-HRGLI 318
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 11/217 (5%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEM-PQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
+I + ALI+ Y GSL A +F+ + ++D+ ++S +I C G E LF +M
Sbjct: 233 DIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEM 292
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGI-WVHAYIRRAGLGLTVPLGTALINMYS 236
D P S V + ++ A G + G + I G+ ++ ++++Y
Sbjct: 293 TTSDNINPNS---VTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYG 349
Query: 237 RCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
R G I + MP +V+ W SL++G + G + A + + E GA
Sbjct: 350 RSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVL 409
Query: 296 AALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGC 332
+ V G W + +R E V + + GC
Sbjct: 410 LSNVYAKTG-----RWMEVKCIRHEMEVKGINKVPGC 441
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/441 (43%), Positives = 274/441 (62%), Gaps = 6/441 (1%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N ++ Y +G L A +F EMP RD SWST+IV +NG E+ F+++Q +
Sbjct: 207 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQ----R 262
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
S + V + V+SA S G+ E G +H ++ +AG V + ALI+MYSRCG++
Sbjct: 263 AGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPM 322
Query: 244 SVKVFEEMPH-RNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACS 302
+ VFE M R +V+WTS+I GLA+HG+ EA+R F +M G+ PDG ++ + L ACS
Sbjct: 323 ARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACS 382
Query: 303 HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIW 362
H GL+E+G F M+ Y + P +EHYGCMVDL GR+G L +A+ F+ MPI P +++W
Sbjct: 383 HAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVW 442
Query: 363 RTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMREN 422
RTLLGAC +H ++ LAE+ K+R+NELDP++ GD VLLSNAY +R SM
Sbjct: 443 RTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQ 502
Query: 423 RIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIK-LGGYAPNTSSVLHD 481
RI K S+V + + +++F +G+ E + L ++ +K GY P +S L+D
Sbjct: 503 RIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYD 562
Query: 482 IQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDII 541
++EEEKE + HSEKLA+AF L IR++KNLRIC DCH+ MK S ++ +I+
Sbjct: 563 VEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEIL 622
Query: 542 IRDRNRFHHFSKGSCSCGDFW 562
+RDRNRFH F GSCSC D+W
Sbjct: 623 VRDRNRFHSFKDGSCSCRDYW 643
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 15/240 (6%)
Query: 133 SGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVM 192
S +L A L P+ D ++TL+ ++ + P ++++F +M P+S
Sbjct: 52 SDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAF 111
Query: 193 MLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMP 252
VI AV + +L G +H + GL + +GT LI MY CG ++ + KVF+EM
Sbjct: 112 ---VIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMH 168
Query: 253 HRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWR 312
N+V W ++IT R + A R++ + L + ++ L G +E R
Sbjct: 169 QPNLVAWNAVITACF---RGNDVAGA-REIFDKMLVRNHTSWNVMLAGYIKAGELESAKR 224
Query: 313 VFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP---IKPNSVIWRTLLGAC 369
+F M V + M+ + G E+F + ++ + PN V +L AC
Sbjct: 225 IFSEMPHRDDV-----SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSAC 279
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/450 (40%), Positives = 280/450 (62%), Gaps = 5/450 (1%)
Query: 115 GFASNIFVQNALINAY--GSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALS 172
GF + V N L++AY G G + +A +FD++ +D S+++++ + +G EA
Sbjct: 213 GFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFE 272
Query: 173 LFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALI 232
+F+++ + + + + +V+ AVS GAL +G +H + R GL V +GT++I
Sbjct: 273 VFRRLV---KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329
Query: 233 NMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGA 292
+MY +CG ++ + K F+ M ++NV +WT++I G +HG + +AL F M ++G+RP+
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389
Query: 293 AYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVED 352
+ + L ACSH GL +GWR F +M+ +GV P LEHYGCMVDLLGRAG L +A+ ++
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449
Query: 353 MPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXX 412
M +KP+S+IW +LL AC H ++ LAE + R+ ELD + G Y+LLS+ Y
Sbjct: 450 MKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDV 509
Query: 413 XXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYA 472
VR M+ +VK PG S++ ++ VH F+ GD HPQ E+I +FL + + GY
Sbjct: 510 ERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYV 569
Query: 473 PNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHV 532
NTSSV HD+ EEEKE +L HSEKLA+AF ++ + V+KNLR+C DCH+ +K +
Sbjct: 570 SNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLI 629
Query: 533 SGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
S I D++ ++RD RFHHF G CSCGD+W
Sbjct: 630 SKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 162/363 (44%), Gaps = 50/363 (13%)
Query: 53 DPTPYNTVIRHLALHSPTLATTL-FSHMHRTGVTVDHFTFPLIXXXXXX---XXXXXXXX 108
D +N+VI LA + L FS M + + +FP
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 109 XXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPA 168
G+ S+IFV +ALI Y + G L A +FDE+P+R++ SW+++I + NG
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 169 EALSLFQQMQLGDPQVPEST--DGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVP 226
+A+SLF+ + + + ++ D + ++SVISA S + A L +H+++ + G V
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 227 LGTALINMYSRCGSIDRSV--KVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM-R 283
+G L++ Y++ G +V K+F+++ ++ V++ S+++ A G S EA FR + +
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 284 EAGLRPDGAAYTAALVACSHGGL-----------------------------------VE 308
+ + + L+A SH G VE
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 309 DGWRVFESMRSE--YGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL 366
+ F+ M+++ M+ YG + G A LE F + D ++PN + + ++L
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYG----MHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 367 GAC 369
AC
Sbjct: 396 AAC 398
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/523 (39%), Positives = 289/523 (55%), Gaps = 14/523 (2%)
Query: 50 PIPDPTPYNTVIRHLALHSPTL--ATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXX 107
P D +N++I LA +L A F + R G ++ TF +
Sbjct: 477 PEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG 536
Query: 108 XXX---XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR-DLASWSTLIVCFTN 163
A +NALI YG G ++ +F M +R D +W+++I + +
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 164 NGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGL 223
N A+AL L M Q + D M +V+SA +S+ LE G+ VHA RA L
Sbjct: 597 NELLAKALDLVWFM----LQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLES 652
Query: 224 TVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMR 283
V +G+AL++MYS+CG +D +++ F MP RN +W S+I+G A HG+ EAL+ F M+
Sbjct: 653 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 284 EAGLRP-DGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGM 342
G P D + L ACSH GL+E+G++ FESM YG+ P +EH+ CM D+LGRAG
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGE 772
Query: 343 LLEAFKFVEDMPIKPNSVIWRTLLGACVNHN--DLVLAEKAKERVNELDPHHDGDYVLLS 400
L + F+E MP+KPN +IWRT+LGAC N L +KA E + +L+P + +YVLL
Sbjct: 773 LDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLG 832
Query: 401 NAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLV 460
N Y R M++ + KE G S V + VH FV+GD SHP + I K L
Sbjct: 833 NMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLK 892
Query: 461 SVVDTIKLGGYAPNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRK-AIRVIKNL 519
+ ++ GY P T L+D+++E KE L YHSEKLAVAFVL R IR++KNL
Sbjct: 893 ELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNL 952
Query: 520 RICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
R+C DCHS K++S I + II+RD NRFHHF G+CSC DFW
Sbjct: 953 RVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 153/342 (44%), Gaps = 17/342 (4%)
Query: 38 TASYAAAVLLRFPIPDPTPYNTVIR-HLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXX 96
+ YA + + +N++I + A +FS M G +TF +
Sbjct: 155 SVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT 214
Query: 97 XXXXXXX-----XXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDL 151
G +++FV + L++A+ SGSL+ A +F++M R+
Sbjct: 215 TACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNA 274
Query: 152 ASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVI---SAVSSLGALEL 208
+ + L+V + EA LF M PES V++LS S +G L+
Sbjct: 275 VTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESY--VILLSSFPEYSLAEEVG-LKK 331
Query: 209 GIWVHAYIRRAGL-GLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLA 267
G VH ++ GL V +G L+NMY++CGSI + +VF M ++ V+W S+ITGL
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391
Query: 268 VHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVF-ESMRSEYGVYPM 326
+G EA+ ++ MR + P ++L +C+ + G ++ ES++ G+
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK--LGIDLN 449
Query: 327 LEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGA 368
+ ++ L G L E K MP + + V W +++GA
Sbjct: 450 VSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 113/234 (48%), Gaps = 20/234 (8%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
++++ N LINAY +G A +FDEMP R+ SW+ ++ ++ NG EAL + M
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDM- 93
Query: 179 LGDPQVPES--TDGVMMLSVISAVSSLGALEL--GIWVHAYIRRAGLGLTVPLGTALINM 234
V E ++ +SV+ A +G++ + G +H + + + + LI+M
Sbjct: 94 -----VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISM 148
Query: 235 YSRC-GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
Y +C GS+ ++ F ++ +N V+W S+I+ + G R A R F M+ G RP
Sbjct: 149 YWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRP--TE 206
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAF 347
YT + + L E R+ E + ++ G + DL +G L+ AF
Sbjct: 207 YTFGSLVTTACSLTEPDVRLLEQ------IMCTIQKSGLLTDLFVGSG-LVSAF 253
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 124/256 (48%), Gaps = 7/256 (2%)
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
+ N L+N Y GS+ A +F M +D SW+++I NG EA+ ++ M+ D
Sbjct: 351 IGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHD 410
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSI 241
+P S ++S +S+ +SL +LG +H + G+ L V + AL+ +Y+ G +
Sbjct: 411 I-LPGS---FTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYL 466
Query: 242 DRSVKVFEEMPHRNVVTWTSLITGLAVHGRSR-EALRAFRDMREAGLRPDGAAYTAALVA 300
+ K+F MP + V+W S+I LA RS EA+ F + + AG + + +++ L A
Sbjct: 467 NECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSA 526
Query: 301 CSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSV 360
S E G ++ + + + ++ G+ G + K M + ++V
Sbjct: 527 VSSLSFGELGKQI-HGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNV 585
Query: 361 IWRTLLGACVNHNDLV 376
W +++ + HN+L+
Sbjct: 586 TWNSMISGYI-HNELL 600
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Query: 188 TDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKV 247
T+ V + V S V GA + H+ + + L V L LIN Y G + KV
Sbjct: 2 TNCVPLSFVQSCVGHRGAAR---FFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKV 58
Query: 248 FEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLV 307
F+EMP RN V+W +++G + +G +EAL RDM + G+ + A+ + L AC G V
Sbjct: 59 FDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/576 (36%), Positives = 309/576 (53%), Gaps = 26/576 (4%)
Query: 2 NRVYNLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVI 61
+++ L + + G + RCA P D S+A + P P +N +I
Sbjct: 17 SQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDL-SFAVQIFRYIPKPLTNDWNAII 75
Query: 62 RHLALHS-PTLATTLFSHM------HRTGVTVDHFTFPLIXXXXXXXXXXXXXXX---XX 111
R A S P+LA + + M VD T
Sbjct: 76 RGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQI 135
Query: 112 XXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEAL 171
G +++ + L++AY +G L A LFDEMP RD+ASW+ LI + +EA+
Sbjct: 136 NRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAM 195
Query: 172 SLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWV-HAYIRRAGLGLTVPLGTA 230
L+++M+ + E V +++ + A S LG ++ G + H Y V + A
Sbjct: 196 ELYKRMETEGIRRSE----VTVVAALGACSHLGDVKEGENIFHGYSND-----NVIVSNA 246
Query: 231 LINMYSRCGSIDRSVKVFEEMP-HRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRP 289
I+MYS+CG +D++ +VFE+ ++VVTW ++ITG AVHG + AL F + + G++P
Sbjct: 247 AIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKP 306
Query: 290 DGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKF 349
D +Y AAL AC H GLVE G VF +M + GV ++HYGC+VDLL RAG L EA
Sbjct: 307 DDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDI 365
Query: 350 VEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXX 409
+ M + P+ V+W++LLGA ++D+ +AE A + E+ ++DGD+VLLSN Y
Sbjct: 366 ICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRW 425
Query: 410 XXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLG 469
VR+ M ++ K PGLS + +HEF + D SH QW EI + + + I+
Sbjct: 426 KDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIRED 485
Query: 470 GYAPNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLY---HRDRKAIRVIKNLRICYDCH 526
GY T VLHDI EEEKE++L YHSEKLAVA+ L+ + +RVI NLRIC DCH
Sbjct: 486 GYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCH 545
Query: 527 SFMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
KH+S I+ ++II+RDR RFH F GSCSC DFW
Sbjct: 546 VVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/518 (37%), Positives = 287/518 (55%), Gaps = 8/518 (1%)
Query: 49 FPIPDPTPYNTVIRHLALHSP-TLATTLFSHMHRTGVTVDHFTFPL---IXXXXXXXXXX 104
P D YNT+I A A + M T + D FT I
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 105 XXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNN 164
G S++++ ++L++ Y S + + +F + RD SW++L+ + N
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321
Query: 165 GYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLT 224
G EAL LF+QM + V SVI A + L L LG +H Y+ R G G
Sbjct: 322 GRYNEALRLFRQMVTAKVK----PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN 377
Query: 225 VPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE 284
+ + +AL++MYS+CG+I + K+F+ M + V+WT++I G A+HG EA+ F +M+
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 437
Query: 285 AGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLL 344
G++P+ A+ A L ACSH GLV++ W F SM YG+ LEHY + DLLGRAG L
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497
Query: 345 EAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYX 404
EA+ F+ M ++P +W TLL +C H +L LAEK E++ +D + G YVL+ N Y
Sbjct: 498 EAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYA 557
Query: 405 XXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVD 464
+R MR+ + K+P S + + H FVSGD SHP ++I +FL +V++
Sbjct: 558 SNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVME 617
Query: 465 TIKLGGYAPNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYD 524
++ GY +TS VLHD+ EE K L HSE+LAVAF ++ IRV KN+RIC D
Sbjct: 618 QMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTD 677
Query: 525 CHSFMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
CH +K +S I +++II+RD +RFHHF++G+CSCGD+W
Sbjct: 678 CHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 154/358 (43%), Gaps = 52/358 (14%)
Query: 52 PDPTPYNTVIRHL---ALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXX 108
P + +VIR +L S LA+ F M +G DH FP +
Sbjct: 68 PPVLAWKSVIRCFTDQSLFSKALAS--FVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125
Query: 109 XX---XXXXGFASNIFVQNALINAYGS---SGSLNLAVHLFDEMPQR------------- 149
G +++ NAL+N Y GS ++FDEMPQR
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 150 --------------------DLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTD 189
D+ S++T+I + +G +AL + ++M D + D
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK----PD 241
Query: 190 GVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFE 249
+ SV+ S + G +H Y+ R G+ V +G++L++MY++ I+ S +VF
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 250 EMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVED 309
+ R+ ++W SL+ G +GR EALR FR M A ++P A+++ + AC+H +
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 310 GWRVFE-SMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL 366
G ++ +R +G + +VD+ + G + A K + M + + V W ++
Sbjct: 362 GKQLHGYVLRGGFGSNIFIA--SALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAII 416
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 133/329 (40%), Gaps = 83/329 (25%)
Query: 126 LINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVP 185
+I+ Y + L+ A+ LF + + +W ++I CFT+ ++AL+ F +M+ + P
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMR-ASGRCP 103
Query: 186 ESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC---GS-- 240
D + SV+ + + + L G VH +I R G+ + G AL+NMY++ GS
Sbjct: 104 ---DHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKI 160
Query: 241 -------------------------------IDRSVKVFEEMPHRNVVTWTSLITGLAVH 269
ID +VFE MP ++VV++ ++I G A
Sbjct: 161 SVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQS 220
Query: 270 GRSREALRAFRDMREAGLRPDGAAYTAALVACS-----------HG-------------- 304
G +ALR R+M L+PD ++ L S HG
Sbjct: 221 GMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIG 280
Query: 305 ----------GLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM- 353
+ED RVF + G+ + +V + G EA + M
Sbjct: 281 SSLVDMYAKSARIEDSERVFSRLYCRDGI-----SWNSLVAGYVQNGRYNEALRLFRQMV 335
Query: 354 --PIKPNSVIWRTLLGACVNHNDLVLAEK 380
+KP +V + +++ AC + L L ++
Sbjct: 336 TAKVKPGAVAFSSVIPACAHLATLHLGKQ 364
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/585 (36%), Positives = 316/585 (54%), Gaps = 30/585 (5%)
Query: 1 MNRVYNLHATLIKTGQHNNPLSLRTFFLRCAELPSA-DTASYAAAVLLRFPIPDPTPYNT 59
M+++ LHA ++T P +L + + +L S+ +YA V +NT
Sbjct: 61 MSQLKQLHAFTLRTTYPEEPATL-FLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNT 119
Query: 60 VIRHLA--LHSPTLATTLFSHM-HRTGVTVDHFTFPLIXXXXXXX---XXXXXXXXXXXX 113
+IR A + A L+ M R + D TFP +
Sbjct: 120 LIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVK 179
Query: 114 XGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSL 173
GF +++V N LI+ YGS G L+LA +FDEMP+R L SW+++I G AL L
Sbjct: 180 HGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQL 239
Query: 174 FQQMQLG-DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRR---AGLGLTVPLGT 229
F++MQ +P DG M SV+SA + LG+L LG W HA++ R + + V +
Sbjct: 240 FREMQRSFEP------DGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKN 293
Query: 230 ALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM--REAGL 287
+LI MY +CGS+ + +VF+ M R++ +W ++I G A HGR+ EA+ F M + +
Sbjct: 294 SLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENV 353
Query: 288 RPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAF 347
RP+ + L+AC+H G V G + F+ M +Y + P LEHYGC+VDL+ RAG + EA
Sbjct: 354 RPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAI 413
Query: 348 KFVEDMPIKPNSVIWRTLLGACVNHNDLV-LAEK-------AKERVNELDPHHDGDYVLL 399
V MP+KP++VIWR+LL AC V L+E+ KE + + G YVLL
Sbjct: 414 DMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLL 473
Query: 400 SNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFL 459
S Y VR M E+ I KEPG S + I+ + HEF +GD SHPQ ++I + L
Sbjct: 474 SRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQL 533
Query: 460 VSVVDTIKLGGYAPNTSS--VLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIK 517
+ D ++ GY P+ S ++ + KE+SL HSE+LA+AF L+ + IR+ K
Sbjct: 534 KVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFK 593
Query: 518 NLRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
NLR+C DCH K +S +F+ +II+RDR RFHHF GSCSC D+W
Sbjct: 594 NLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/456 (39%), Positives = 280/456 (61%), Gaps = 8/456 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G + FVQN L++ Y G +++A+ +F +M RDL +W+T+I + + + +AL L
Sbjct: 435 GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLL 494
Query: 175 QQMQ-------LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPL 227
+MQ G +V + + +++++ + ++L AL G +HAY + L V +
Sbjct: 495 HKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV 554
Query: 228 GTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGL 287
G+AL++MY++CG + S KVF+++P +NV+TW +I +HG +EA+ R M G+
Sbjct: 555 GSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 614
Query: 288 RPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAF 347
+P+ + + ACSH G+V++G R+F M+ +YGV P +HY C+VDLLGRAG + EA+
Sbjct: 615 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 674
Query: 348 KFVEDMPIKPNSV-IWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXX 406
+ + MP N W +LLGA HN+L + E A + + +L+P+ YVLL+N Y
Sbjct: 675 QLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 734
Query: 407 XXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTI 466
VR +M+E + KEPG S + VH+FV+GD+SHPQ E++ +L ++ + +
Sbjct: 735 GLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 794
Query: 467 KLGGYAPNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCH 526
+ GY P+TS VLH+++E+EKE L HSEKLA+AF +L IRV KNLR+C DCH
Sbjct: 795 RKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCH 854
Query: 527 SFMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
K +S I D++II+RD RFH F G+CSCGD+W
Sbjct: 855 LATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 158/392 (40%), Gaps = 39/392 (9%)
Query: 6 NLHATLIKTGQHNNPL--SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRH 63
+HA ++ G+ N+ + +L + + +L S+ +L F D +NTV+
Sbjct: 223 QVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKV------LLGSFGGRDLVTWNTVLSS 276
Query: 64 LALHSPTL-ATTLFSHMHRTGVTVDHFT----FPLIXXXXXXXXXXXXXXXXXXXXGFAS 118
L + L A M GV D FT P
Sbjct: 277 LCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE 336
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N FV +AL++ Y + + +FD M R + W+ +I ++ N + EAL LF M+
Sbjct: 337 NSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGME 396
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+ ST M V+ A GA +H ++ + GL + L++MYSR
Sbjct: 397 ESAGLLANST---TMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMR-----------EAGL 287
G ID ++++F +M R++VTW ++ITG +AL M+ L
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513
Query: 288 RPDGAAYTAALVACSHGGLVEDG-----WRVFESMRSEYGVYPMLEHYGCMVDLLGRAGM 342
+P+ L +C+ + G + + ++ ++ V L VD+ + G
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSAL------VDMYAKCGC 567
Query: 343 LLEAFKFVEDMPIKPNSVIWRTLLGACVNHND 374
L + K + +P K N + W ++ A H +
Sbjct: 568 LQMSRKVFDQIPQK-NVITWNVIIMAYGMHGN 598
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 8/195 (4%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
++ V N L+N Y G +FD + +R+ SW++LI + AL F+ M
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 191
Query: 179 LGDPQVPESTDGVMMLSVISAVSSL---GALELGIWVHAYIRRAGLGLTVPLGTALINMY 235
D V S+ ++SV++A S+L L +G VHAY R G L + L+ MY
Sbjct: 192 --DENVEPSS--FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMY 246
Query: 236 SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
+ G + S + R++VTW ++++ L + + EAL R+M G+ PD +
Sbjct: 247 GKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS 306
Query: 296 AALVACSHGGLVEDG 310
+ L ACSH ++ G
Sbjct: 307 SVLPACSHLEMLRTG 321
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 195 SVISAVSSLGALELGIWVHAYIRRAGLGL-TVPLGTALINMYSRCGSIDRSVKVFEEMPH 253
+++ AV+ L +ELG +HA++ + G G+ +V + L+N+Y +CG KVF+ +
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE 161
Query: 254 RNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSH 303
RN V+W SLI+ L + AL AFR M + + P + + ACS+
Sbjct: 162 RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/527 (37%), Positives = 299/527 (56%), Gaps = 10/527 (1%)
Query: 42 AAAVLLRFPIPDPTPYNTVIRHLA-LHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXX 100
A + P+ D +N +I A + A LF M +T V D T +
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 101 XXXXXXXXXX---XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTL 157
GF SN+ + NALI+ Y G L A LF+ +P +D+ SW+TL
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338
Query: 158 IVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIR 217
I +T+ EAL LFQ+M + E+ + V MLS++ A + LGA+++G W+H YI
Sbjct: 339 IGGYTHMNLYKEALLLFQEML----RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 218 RAGLGLT--VPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREA 275
+ G+T L T+LI+MY++CG I+ + +VF + H+++ +W ++I G A+HGR+ +
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 454
Query: 276 LRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVD 335
F MR+ G++PD + L ACSH G+++ G +F +M +Y + P LEHYGCM+D
Sbjct: 455 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMID 514
Query: 336 LLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGD 395
LLG +G+ EA + + M ++P+ VIW +LL AC H ++ L E E + +++P + G
Sbjct: 515 LLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGS 574
Query: 396 YVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEI 455
YVLLSN Y R + + + K PG S + ID VVHEF+ GD HP+ EI
Sbjct: 575 YVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 634
Query: 456 MKFLVSVVDTIKLGGYAPNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRV 515
L + ++ G+ P+TS VL +++EE KE +L +HSEKLA+AF L+ + + +
Sbjct: 635 YGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTI 694
Query: 516 IKNLRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
+KNLR+C +CH K +S I+ ++II RDR RFHHF G CSC D+W
Sbjct: 695 VKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 156/339 (46%), Gaps = 39/339 (11%)
Query: 7 LHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLAL 66
+HA +IK G HN +L C P + YA +V P+ +NT+ R AL
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 67 HS-PTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX------------XXX 113
S P A L+ M G+ + +TFP +
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 114 XGFASNIFVQN----------------------ALINAYGSSGSLNLAVHLFDEMPQRDL 151
+++VQN ALI Y S G + A LFDE+P +D+
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 152 ASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIW 211
SW+ +I + G EAL LF+ M + + EST M++V+SA + G++ELG
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST----MVTVVSACAQSGSIELGRQ 287
Query: 212 VHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGR 271
VH +I G G + + ALI++YS+CG ++ + +FE +P+++V++W +LI G
Sbjct: 288 VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNL 347
Query: 272 SREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDG 310
+EAL F++M +G P+ + L AC+H G ++ G
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 39/270 (14%)
Query: 136 LNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM-QLGDPQVPESTDGVMML 194
L A+ +F + + +L W+T+ + P AL L+ M LG +P S
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLG--LLPNS---YTFP 138
Query: 195 SVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR 254
V+ + + A + G +H ++ + G L + + T+LI+MY + G ++ + KVF++ PHR
Sbjct: 139 FVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR 198
Query: 255 -------------------------------NVVTWTSLITGLAVHGRSREALRAFRDMR 283
+VV+W ++I+G A G +EAL F+DM
Sbjct: 199 DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM 258
Query: 284 EAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGML 343
+ +RPD + + AC+ G +E G +V + ++G L+ ++DL + G L
Sbjct: 259 KTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI-DDHGFGSNLKIVNALIDLYSKCGEL 317
Query: 344 LEAFKFVEDMPIKPNSVIWRTLLGACVNHN 373
A E +P K + + W TL+G + N
Sbjct: 318 ETACGLFERLPYK-DVISWNTLIGGYTHMN 346
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/447 (40%), Positives = 270/447 (60%), Gaps = 10/447 (2%)
Query: 120 IFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF--QQM 177
+ NA+I+ G G + A +FD M +R+ ASW T+I NG+ EAL LF Q
Sbjct: 265 VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK 324
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
Q P P ++S++S +SL +L G VHA + R + V + + L+ MY +
Sbjct: 325 QGVRPTFP------TLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIK 378
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAG-LRPDGAAYTA 296
CG + +S +F+ P ++++ W S+I+G A HG EAL+ F +M +G +P+ + A
Sbjct: 379 CGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVA 438
Query: 297 ALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIK 356
L ACS+ G+VE+G +++ESM S +GV P+ HY CMVD+LGRAG EA + ++ M ++
Sbjct: 439 TLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVE 498
Query: 357 PNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVR 416
P++ +W +LLGAC H+ L +AE +++ E++P + G Y+LLSN Y +R
Sbjct: 499 PDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELR 558
Query: 417 NSMRENRIVKEPGLSVVHIDQVVHEFVSGD-NSHPQWEEIMKFLVSVVDTIKLGGYAPNT 475
M+ + K PG S ++ VH F G NSHP+ E I+K L + ++ GY P+
Sbjct: 559 KLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDC 618
Query: 476 SSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGI 535
S LHD+ EEEK +SL YHSE+LAVA+ LL + IRV+KNLR+C DCH+ +K +S +
Sbjct: 619 SYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKV 678
Query: 536 FDKDIIIRDRNRFHHFSKGSCSCGDFW 562
+++II+RD NRFHHF G CSC D+W
Sbjct: 679 KEREIILRDANRFHHFRNGECSCKDYW 705
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 123/248 (49%), Gaps = 22/248 (8%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
NI N L++ Y +G ++ A +FD MP+R++ SW+ L+ + +NG A SLF +M
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM- 136
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
P+ + + VM++ + A +L + A T++I+ +
Sbjct: 137 ---PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIA--------RTSMIHGLCKE 185
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G +D + ++F+EM R+V+TWT+++TG + R +A + F M E ++T+ L
Sbjct: 186 GRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSML 241
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
+ G +ED +FE M V P++ M+ LG+ G + +A + + M + N
Sbjct: 242 MGYVQNGRIEDAEELFEVM----PVKPVIA-CNAMISGLGQKGEIAKARRVFDSMK-ERN 295
Query: 359 SVIWRTLL 366
W+T++
Sbjct: 296 DASWQTVI 303
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
F +++V + L+ Y G L + +FD P +D+ W+++I + ++G EAL +F
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRA-GLGLTVPLGTALINM 234
+M L P + V ++ +SA S G +E G+ ++ + G+ +++M
Sbjct: 422 EMPLSGSTKP---NEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDM 478
Query: 235 YSRCGSIDRSVKVFEEMP-HRNVVTWTSLITGLAVHGR 271
R G + ++++ + M + W SL+ H +
Sbjct: 479 LGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQ 516
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/445 (40%), Positives = 268/445 (60%), Gaps = 4/445 (0%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
N FV+ L+N Y G + A +FD M ++D+ +WST+I + +N +P E + LF QM
Sbjct: 245 KNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQM 304
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
L + P D ++ +S+ +SLGAL+LG W + I R + + ALI+MY++
Sbjct: 305 -LQENLKP---DQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAK 360
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
CG++ R +VF+EM +++V + I+GLA +G + + F + G+ PDG+ +
Sbjct: 361 CGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGL 420
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
L C H GL++DG R F ++ Y + +EHYGCMVDL GRAGML +A++ + DMP++P
Sbjct: 421 LCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRP 480
Query: 358 NSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRN 417
N+++W LL C D LAE + + L+P + G+YV LSN Y VR+
Sbjct: 481 NAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRD 540
Query: 418 SMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSS 477
M + + K PG S + ++ VHEF++ D SHP ++I L + + ++L G+ P T
Sbjct: 541 MMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEF 600
Query: 478 VLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFD 537
V D++EEEKE LGYHSEKLAVA L+ + IRV+KNLR+C DCH MK +S I
Sbjct: 601 VFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITR 660
Query: 538 KDIIIRDRNRFHHFSKGSCSCGDFW 562
++I++RD NRFH F+ GSCSC D+W
Sbjct: 661 REIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 170/368 (46%), Gaps = 28/368 (7%)
Query: 1 MNRVYNLHATLIKTGQHN-----NPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPT 55
+N + +H +LI H+ N L RT F R Y+ + P+
Sbjct: 26 VNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFR--------QTKYSYLLFSHTQFPNIF 77
Query: 56 PYNTVIRHLA---LHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXX---X 109
YN++I L TL LF + + G+ + FTFPL+
Sbjct: 78 LYNSLINGFVNNHLFHETL--DLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHS 135
Query: 110 XXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAE 169
GF ++ +L++ Y SG LN A LFDE+P R + +W+ L +T +G E
Sbjct: 136 LVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHRE 195
Query: 170 ALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGT 229
A+ LF++M ++ D ++ V+SA +G L+ G W+ Y+ + + T
Sbjct: 196 AIDLFKKM----VEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRT 251
Query: 230 ALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRP 289
L+N+Y++CG ++++ VF+ M +++VTW+++I G A + +E + F M + L+P
Sbjct: 252 TLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKP 311
Query: 290 DGAAYTAALVACSHGGLVEDG-WRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFK 348
D + L +C+ G ++ G W + R E+ + + ++D+ + G + F+
Sbjct: 312 DQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMAN--ALIDMYAKCGAMARGFE 369
Query: 349 FVEDMPIK 356
++M K
Sbjct: 370 VFKEMKEK 377
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 114/228 (50%), Gaps = 12/228 (5%)
Query: 142 LFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVS 201
LF ++ +++LI F NN E L LF ++ + G V+ A +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYL----HGFTFPLVLKACT 122
Query: 202 SLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTS 261
+ +LGI +H+ + + G V T+L+++YS G ++ + K+F+E+P R+VVTWT+
Sbjct: 123 RASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTA 182
Query: 262 LITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDG-W--RVFESMR 318
L +G GR REA+ F+ M E G++PD L AC H G ++ G W + E M
Sbjct: 183 LFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME 242
Query: 319 SEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL 366
+ + +V+L + G +E + V D ++ + V W T++
Sbjct: 243 MQKNSFVRTT----LVNLYAKCGK-MEKARSVFDSMVEKDIVTWSTMI 285
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 77/152 (50%), Gaps = 6/152 (3%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
F +N+F+ NALI+ Y G++ +F EM ++D+ + I NG+ + ++F
Sbjct: 344 FLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFG 403
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGI-WVHAYIRRAGLGLTVPLGTALINM 234
Q + ++ S DG L ++ G ++ G+ + +A L TV ++++
Sbjct: 404 QTE----KLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDL 459
Query: 235 YSRCGSIDRSVKVFEEMPHR-NVVTWTSLITG 265
+ R G +D + ++ +MP R N + W +L++G
Sbjct: 460 WGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/426 (42%), Positives = 259/426 (60%), Gaps = 9/426 (2%)
Query: 142 LFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVS 201
+F +M ++ L SW+ +I + N P EA+ L+ +M+ D P D V + SV+ A
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRME-ADGFEP---DAVSITSVLPACG 320
Query: 202 SLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTS 261
AL LG +H YI R L + L ALI+MY++CG ++++ VFE M R+VV+WT+
Sbjct: 321 DTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTA 380
Query: 262 LITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEY 321
+I+ GR +A+ F ++++GL PD A+ L ACSH GL+E+G F+ M Y
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHY 440
Query: 322 GVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKA 381
+ P LEH CMVDLLGRAG + EA++F++DM ++PN +W LLGAC H+D + A
Sbjct: 441 KITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLA 500
Query: 382 KERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHE 441
+++ +L P G YVLLSN Y +RN M+ + K PG S V +++++H
Sbjct: 501 ADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHT 560
Query: 442 FVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHDIQEEEKEHSLGYHSEKLAVA 501
F+ GD SHPQ +EI + L +V +K GY P++ S LHD++EE+KE L HSEKLA+
Sbjct: 561 FLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIV 620
Query: 502 FVLLYHRDRK-----AIRVIKNLRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSKGSC 556
F L+ ++ + IR+ KNLRIC DCH K +S I ++IIIRD NRFH F G C
Sbjct: 621 FALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVC 680
Query: 557 SCGDFW 562
SCGD+W
Sbjct: 681 SCGDYW 686
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 124/258 (48%), Gaps = 10/258 (3%)
Query: 126 LINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVP 185
L+ AY S + A +FDE+P+R++ + +I + NNG+ E + +F M G P
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTM-CGCNVRP 138
Query: 186 ESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSV 245
D V+ A S G + +G +H + GL T+ +G L++MY +CG + +
Sbjct: 139 ---DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195
Query: 246 KVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGG 305
V +EM R+VV+W SL+ G A + R +AL R+M + D + L A S+
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN-- 253
Query: 306 LVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP---IKPNSVIW 362
+ + M + G ++ + M+ + + M +EA + M +P++V
Sbjct: 254 TTTENVMYVKDMFFKMGKKSLVS-WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSI 312
Query: 363 RTLLGACVNHNDLVLAEK 380
++L AC + + L L +K
Sbjct: 313 TSVLPACGDTSALSLGKK 330
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 212 VHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGR 271
VH+ I L LG L+ Y+ + + KVF+E+P RNV+ +I +G
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 272 SREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYG 331
E ++ F M +RPD + L ACS G + G ++ S ++ G+ L
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSA-TKVGLSSTLFVGN 179
Query: 332 CMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL 366
+V + G+ G L EA +++M + + V W +L+
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLV 213
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/524 (35%), Positives = 297/524 (56%), Gaps = 10/524 (1%)
Query: 45 VLLRFPIPDPTPYNTVIRHLALH-SPTLATTLFSHMHRTGVTVDHFTF----PLIXXXXX 99
V R + D +N++I+ L+ P A +LF M + + D T ++
Sbjct: 304 VFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGD 363
Query: 100 XXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIV 159
F +I + NA++ Y G ++ A +F+ +P D+ SW+T+I
Sbjct: 364 IRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIIS 423
Query: 160 CFTNNGYPAEALSLFQQMQL-GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRR 218
+ NG+ +EA+ ++ M+ G+ + T +SV+ A S GAL G+ +H + +
Sbjct: 424 GYAQNGFASEAIEMYNIMEEEGEIAANQGT----WVSVLPACSQAGALRQGMKLHGRLLK 479
Query: 219 AGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRA 278
GL L V + T+L +MY +CG ++ ++ +F ++P N V W +LI HG +A+
Sbjct: 480 NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVML 539
Query: 279 FRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLG 338
F++M + G++PD + L ACSH GLV++G FE M+++YG+ P L+HYGCMVD+ G
Sbjct: 540 FKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYG 599
Query: 339 RAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVL 398
RAG L A KF++ M ++P++ IW LL AC H ++ L + A E + E++P H G +VL
Sbjct: 600 RAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVL 659
Query: 399 LSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKF 458
LSN Y +R+ + K PG S + +D V F +G+ +HP +EE+ +
Sbjct: 660 LSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRE 719
Query: 459 LVSVVDTIKLGGYAPNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKN 518
L ++ +K+ GY P+ VL D++++EKEH L HSE+LA+AF L+ + IR+ KN
Sbjct: 720 LTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKN 779
Query: 519 LRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
LR+C DCHS K +S I +++II+RD NRFHHF G CSCGD+W
Sbjct: 780 LRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 109/212 (51%), Gaps = 8/212 (3%)
Query: 79 MHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNL 138
M +G+T D+ TFP + GF +++V +LI+ Y ++
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGN 203
Query: 139 AVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVIS 198
A LFDEMP RD+ SW+ +I + +G EAL+L ++ + D V ++S++S
Sbjct: 204 ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR--------AMDSVTVVSLLS 255
Query: 199 AVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVT 258
A + G G+ +H+Y + GL + + LI++Y+ G + KVF+ M R++++
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315
Query: 259 WTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
W S+I ++ + A+ F++MR + ++PD
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPD 347
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 115/250 (46%), Gaps = 12/250 (4%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N+ + L+N Y G++ LA H FD + RD+ +W+ +I + G +E + F
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
L P D SV+ A ++ G +H + G V + +LI++YSR
Sbjct: 145 LSSGLTP---DYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRY 198
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
++ + +F+EMP R++ +W ++I+G G ++EAL +R D + L
Sbjct: 199 KAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLL 254
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
AC+ G G + S ++G+ L ++DL G L + K + M ++ +
Sbjct: 255 SACTEAGDFNRGVTI-HSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR-D 312
Query: 359 SVIWRTLLGA 368
+ W +++ A
Sbjct: 313 LISWNSIIKA 322
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/567 (36%), Positives = 302/567 (53%), Gaps = 13/567 (2%)
Query: 2 NRVYNLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVI 61
++ +HA +++TG + SL T L L YA V P +NT+
Sbjct: 25 KQLKKIHAIVLRTG-FSEKNSLLTQLLE--NLVVIGDMCYARQVFDEMHKPRIFLWNTLF 81
Query: 62 R-HLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX---XXXXGFA 117
+ ++ P + L+ M GV D FT+P + GF
Sbjct: 82 KGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFG 141
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
V L+ Y G L+ A LF+ M +DL +W+ + G A AL F +M
Sbjct: 142 CLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKM 201
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
Q D ++S++SA LG+LE+G ++ R+ + + + A ++M+ +
Sbjct: 202 CADAVQF----DSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLK 257
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
CG+ + + +FEEM RNVV+W+++I G A++G SREAL F M+ GLRP+ +
Sbjct: 258 CGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGV 317
Query: 298 LVACSHGGLVEDGWRVFESM--RSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPI 355
L ACSH GLV +G R F M ++ + P EHY CMVDLLGR+G+L EA++F++ MP+
Sbjct: 318 LSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPV 377
Query: 356 KPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXV 415
+P++ IW LLGAC H D++L +K + + E P +VLLSN Y V
Sbjct: 378 EPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKV 437
Query: 416 RNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNT 475
R+ MR+ K S V + +H F GD SHPQ + I + L ++ I+ GY P+T
Sbjct: 438 RSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDT 497
Query: 476 SSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGI 535
SV HD++ EEKE SL +HSEKLA+AF L+ R IRV+KNLR C DCH+F K VS +
Sbjct: 498 CSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSL 557
Query: 536 FDKDIIIRDRNRFHHFSKGSCSCGDFW 562
+II+RD+NRFHHF G CSC +FW
Sbjct: 558 TSTEIIMRDKNRFHHFRNGVCSCKEFW 584
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 358 bits (918), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 192/526 (36%), Positives = 281/526 (53%), Gaps = 12/526 (2%)
Query: 43 AAVLLRFPIPDPTPYNTVIRHLALHS-PTLATTLFSHMHRTGVTVDHFTFPLIXXX---X 98
A L R D + +I+ LA + A F M G+ +D + F +
Sbjct: 224 ALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGL 283
Query: 99 XXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLI 158
F +I+V +ALI+ Y L+ A +FD M Q+++ SW+ ++
Sbjct: 284 GAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMV 343
Query: 159 VCFTNNGYPAEALSLFQQMQLG--DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYI 216
V + G EA+ +F MQ DP D + ISA +++ +LE G H
Sbjct: 344 VGYGQTGRAEEAVKIFLDMQRSGIDP------DHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 217 RRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREAL 276
+GL V + +L+ +Y +CG ID S ++F EM R+ V+WT++++ A GR+ E +
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETI 457
Query: 277 RAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDL 336
+ F M + GL+PDG T + ACS GLVE G R F+ M SEYG+ P + HY CM+DL
Sbjct: 458 QLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDL 517
Query: 337 LGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDY 396
R+G L EA +F+ MP P+++ W TLL AC N +L + + A E + ELDPHH Y
Sbjct: 518 FSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGY 577
Query: 397 VLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIM 456
LLS+ Y +R MRE + KEPG S + +H F + D S P ++I
Sbjct: 578 TLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIY 637
Query: 457 KFLVSVVDTIKLGGYAPNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVI 516
L + + I GY P+TS V HD++E K L YHSE+LA+AF L++ + IRV
Sbjct: 638 AKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVG 697
Query: 517 KNLRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
KNLR+C DCH+ KH+S + ++I++RD RFH F G+CSCGDFW
Sbjct: 698 KNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 132/250 (52%), Gaps = 7/250 (2%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N + N+L+ + G + A+ LF M ++D SW+ +I NG EA+ F++M+
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+ ++ + G SV+ A LGA+ G +HA I R + +G+ALI+MY +C
Sbjct: 263 VQGLKMDQYPFG----SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
+ + VF+ M +NVV+WT+++ G GR+ EA++ F DM+ +G+ PD A+
Sbjct: 319 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAI 378
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
AC++ +E+G + F G+ + +V L G+ G + ++ + +M ++ +
Sbjct: 379 SACANVSSLEEGSQ-FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-D 436
Query: 359 SVIWRTLLGA 368
+V W ++ A
Sbjct: 437 AVSWTAMVSA 446
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 8/202 (3%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N+F N L+ AY +G ++ F+++P RD +W+ LI ++ +G A+ + M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+ V +++++ SS G + LG +H + + G + +G+ L+ MY+
Sbjct: 131 ---RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANV 187
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G I + KVF + RN V + SL+ GL G +AL+ FR G+ D ++ A +
Sbjct: 188 GCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFR-----GMEKDSVSWAAMI 242
Query: 299 VACSHGGLVEDGWRVFESMRSE 320
+ GL ++ F M+ +
Sbjct: 243 KGLAQNGLAKEAIECFREMKVQ 264
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 357 bits (917), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 177/445 (39%), Positives = 267/445 (60%), Gaps = 8/445 (1%)
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEALSLFQQM 177
V NA I +G ++ A+ +F+ ++ ++ SW+++I NG EAL LF++M
Sbjct: 320 VCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM 379
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
Q+ + + V + S++ A ++ AL G H + R L V +G+ALI+MY++
Sbjct: 380 QVAGVK----PNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAK 435
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
CG I+ S VF MP +N+V W SL+ G ++HG+++E + F + L+PD ++T+
Sbjct: 436 CGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSL 495
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
L AC GL ++GW+ F+ M EYG+ P LEHY CMV+LLGRAG L EA+ +++MP +P
Sbjct: 496 LSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEP 555
Query: 358 NSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRN 417
+S +W LL +C N++ LAE A E++ L+P + G YVLLSN Y +RN
Sbjct: 556 DSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRN 615
Query: 418 SMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSS 477
M + K PG S + + V+ ++GD SHPQ ++I + + + ++ G+ PN
Sbjct: 616 KMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDF 675
Query: 478 VLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFD 537
LHD++E+E+E L HSEKLAV F LL D ++VIKNLRIC DCH+ +K +S
Sbjct: 676 ALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAG 735
Query: 538 KDIIIRDRNRFHHFSKGSCSCGDFW 562
++I IRD NRFHHF G CSCGDFW
Sbjct: 736 REIFIRDTNRFHHFKDGICSCGDFW 760
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 180/459 (39%), Gaps = 107/459 (23%)
Query: 8 HATLIKTGQHNNPLSLRTFFLRCAELPS-ADTASYAAAVLLRFPIPDPTPYNTVIRHLAL 66
HA ++K+G N+ ++ + S ++ + A L+ IPDPT Y+ AL
Sbjct: 38 HARILKSGAQNDG------YISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYAL 91
Query: 67 HSPTLATT---LFSHMHRTGVTVDHFTFP---LIXXXXXXXXXXXXXXXXXXXXGFASNI 120
L T +FS M G+ D P + G +
Sbjct: 92 TKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQRD------------------------------ 150
FVQ ++ + Y G + A +FD M +D
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 151 -----LASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGA 205
+ SW+ ++ F +GY EA+ +FQ++ + D V + SV+ +V
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH----HLGFCPDQVTVSSVLPSVGDSEM 267
Query: 206 LELGIWVHAYIRRAGLGLTVPLGTALINMY------------------------------ 235
L +G +H Y+ + GL + +A+I+MY
Sbjct: 268 LNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITG 327
Query: 236 -SRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
SR G +D+++++FE + NVV+WTS+I G A +G+ EAL FR+M+ AG++P+
Sbjct: 328 LSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPN 387
Query: 291 GAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLE-----HYG-CMVDLLGRAGMLL 344
+ L AC + + G RS +G + H G ++D+ + G +
Sbjct: 388 HVTIPSMLPACGNIAALGHG-------RSTHGFAVRVHLLDNVHVGSALIDMYAKCGRIN 440
Query: 345 EAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKE 383
+ MP K N V W +L+ N + KAKE
Sbjct: 441 LSQIVFNMMPTK-NLVCWNSLM------NGFSMHGKAKE 472
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 72 ATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXXXXXGFA------SNIFVQNA 125
A LF M GV +H T P GFA N+ V +A
Sbjct: 372 ALELFREMQVAGVKPNHVTIP---SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSA 428
Query: 126 LINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVP 185
LI+ Y G +NL+ +F+ MP ++L W++L+ F+ +G E +S+F+ + +
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM----RTR 484
Query: 186 ESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLG--TALINMYSRCGSIDR 243
D + S++SA +G + G W + + G+ L + ++N+ R G +
Sbjct: 485 LKPDFISFTSLLSACGQVGLTDEG-WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQE 543
Query: 244 SVKVFEEMPHR-NVVTWTSLIT 264
+ + +EMP + W +L+
Sbjct: 544 AYDLIKEMPFEPDSCVWGALLN 565
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 297/547 (54%), Gaps = 17/547 (3%)
Query: 22 SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLALHS-PTLATTLFSHMH 80
+L + +C +L SA AV Y ++I A A LF M
Sbjct: 336 TLLDMYSKCGDLDSA------KAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 81 RTGVTVDHFTFPLIXXXXXXXXXXXXXXX-----XXXXXGFASNIFVQNALINAYGSSGS 135
G++ D +T + GF +IFV NAL++ Y GS
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF--DIFVSNALMDMYAKCGS 447
Query: 136 LNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLS 195
+ A +F EM +D+ SW+T+I ++ N Y EALSLF + + S D +
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL---EEKRFSPDERTVAC 504
Query: 196 VISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRN 255
V+ A +SL A + G +H YI R G + +L++MY++CG++ + +F+++ ++
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 564
Query: 256 VVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFE 315
+V+WT +I G +HG +EA+ F MR+AG+ D ++ + L ACSH GLV++GWR F
Sbjct: 565 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN 624
Query: 316 SMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDL 375
MR E + P +EHY C+VD+L R G L++A++F+E+MPI P++ IW LL C H+D+
Sbjct: 625 IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDV 684
Query: 376 VLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHI 435
LAEK E+V EL+P + G YVL++N Y +R + + + K PG S + I
Sbjct: 685 KLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 744
Query: 436 DQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHDIQEEEKEHSLGYHS 495
V+ FV+GD+S+P+ E I FL V + GY+P T L D +E EKE +L HS
Sbjct: 745 KGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHS 804
Query: 496 EKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSKGS 555
EKLA+A ++ K IRV KNLR+C DCH K +S + ++I++RD NRFH F G
Sbjct: 805 EKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGH 864
Query: 556 CSCGDFW 562
CSC FW
Sbjct: 865 CSCRGFW 871
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 164/350 (46%), Gaps = 16/350 (4%)
Query: 23 LRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLALHSP-TLATTLFSHMHR 81
L + C +L A + V I +N ++ LA + + LF M
Sbjct: 135 LSLMYTNCGDLKEA------SRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS 188
Query: 82 TGVTVDHFTFPLIXXXXXXXXXXXXXXXX---XXXXGFASNIFVQNALINAYGSSGSLNL 138
+GV +D +TF + GF V N+L+ Y + ++
Sbjct: 189 SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDS 248
Query: 139 AVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVIS 198
A +FDEM +RD+ SW+++I + +NG + LS+F QM + ++ +T ++SV +
Sbjct: 249 ARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLAT----IVSVFA 304
Query: 199 AVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVT 258
+ + LG VH+ +A L++MYS+CG +D + VF EM R+VV+
Sbjct: 305 GCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVS 364
Query: 259 WTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMR 318
+TS+I G A G + EA++ F +M E G+ PD TA L C+ L+++G RV E ++
Sbjct: 365 YTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIK 424
Query: 319 SEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGA 368
+ + M D+ + G + EA +M +K + + W T++G
Sbjct: 425 ENDLGFDIFVSNALM-DMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGG 472
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 118/246 (47%), Gaps = 7/246 (2%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N L++ Y G L+ A +F EM R + S++++I + G EA+ LF++M+ +
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME----E 390
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
S D + +V++ + L+ G VH +I+ LG + + AL++MY++CGS+
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFR-DMREAGLRPDGAAYTAALVACS 302
+ VF EM +++++W ++I G + + + EAL F + E PD L AC+
Sbjct: 451 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 510
Query: 303 HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIW 362
+ G R G + +VD+ + G LL A +D+ K + V W
Sbjct: 511 SLSAFDKG-REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK-DLVSW 568
Query: 363 RTLLGA 368
++
Sbjct: 569 TVMIAG 574
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 133/322 (41%), Gaps = 42/322 (13%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF + + + L Y + G L A +FDE+ W+ L+ +G + ++ LF
Sbjct: 124 GFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLF 183
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
++M ++ D V + SSL ++ G +H +I ++G G +G +L+
Sbjct: 184 KKMMSSGVEM----DSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAF 239
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y + +D + KVF+EM R+V++W S+I G +G + + L F M +G+ D A
Sbjct: 240 YLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATI 299
Query: 295 TAALVACSHGGLVEDGWRVFESM-------RSEYGVYPMLEHYGCMVDL----------- 336
+ C+ L+ G R S+ R + +L+ Y DL
Sbjct: 300 VSVFAGCADSRLISLG-RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 358
Query: 337 -------------LGRAGMLLEAFKFVEDMP---IKPNSVIWRTLLGACVNHNDLVLAEK 380
R G+ EA K E+M I P+ +L C + L ++
Sbjct: 359 DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKR 418
Query: 381 AKERVNELDPHHDGDYVLLSNA 402
E + E D D + +SNA
Sbjct: 419 VHEWIKENDLGFD---IFVSNA 437
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 13/130 (10%)
Query: 193 MLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMP 252
+ SV+ + +L+ G V +IR G + LG+ L MY+ CG + + +VF+E+
Sbjct: 97 LCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVK 156
Query: 253 HRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWR 312
+ W L+ LA G ++ F+ M +G+ D +YT + V+ +
Sbjct: 157 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMD--SYTFSCVS-----------K 203
Query: 313 VFESMRSEYG 322
F S+RS +G
Sbjct: 204 SFSSLRSVHG 213
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/446 (40%), Positives = 265/446 (59%), Gaps = 5/446 (1%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
S + V N+L++ Y A +F +PQR SW+ LI + G L LF +M
Sbjct: 384 SILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM 443
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
+ + + +ST +V+ A +S +L LG +HA+I R+G V G+ L++MY++
Sbjct: 444 RGSNLRADQST----FATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAK 499
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
CGSI +V+VFEEMP RN V+W +LI+ A +G A+ AF M E+GL+PD +
Sbjct: 500 CGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGV 559
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
L ACSH G VE G F++M YG+ P +HY CM+DLLGR G EA K +++MP +P
Sbjct: 560 LTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEP 619
Query: 358 NSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHD-GDYVLLSNAYXXXXXXXXXXXVR 416
+ ++W ++L AC H + LAE+A E++ ++ D YV +SN Y V+
Sbjct: 620 DEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVK 679
Query: 417 NSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTS 476
+MRE I K P S V ++ +H F S D +HP +EI++ + + I+ GY P+TS
Sbjct: 680 KAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTS 739
Query: 477 SVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIF 536
SV+ D+ E+ K SL YHSE+LAVAF L+ + I V+KNLR C DCH+ +K +S I
Sbjct: 740 SVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIV 799
Query: 537 DKDIIIRDRNRFHHFSKGSCSCGDFW 562
++I +RD +RFHHFS+G CSCGD+W
Sbjct: 800 KREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 170/384 (44%), Gaps = 25/384 (6%)
Query: 2 NRVYNLHATLIKTGQHNNP-LSLRTFFLRC-AELPSADTASYAAAVLLRFPIPDPTPYNT 59
N V +HA +K G NP L++ L+ E+ D A + P D +NT
Sbjct: 164 NAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLD---LACVLFEEIPEKDSVTFNT 220
Query: 60 VI---RHLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXX---XXXXXXXXXXXXXX 113
+I L++ ++ LF M ++G FTF +
Sbjct: 221 LITGYEKDGLYTESIH--LFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVT 278
Query: 114 XGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSL 173
GF+ + V N +++ Y + LFDEMP+ D S++ +I ++ +L
Sbjct: 279 TGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHF 338
Query: 174 FQQMQ---LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
F++MQ P +T MLS+ + +SSL ++G +H A + +G +
Sbjct: 339 FREMQCMGFDRRNFPFAT----MLSIAANLSSL---QMGRQLHCQALLATADSILHVGNS 391
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
L++MY++C + + +F+ +P R V+WT+LI+G G L+ F MR + LR D
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRAD 451
Query: 291 GAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFV 350
+ + L A + + G ++ + + + G +VD+ + G + +A +
Sbjct: 452 QSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVF 510
Query: 351 EDMPIKPNSVIWRTLLGACVNHND 374
E+MP + N+V W L+ A ++ D
Sbjct: 511 EEMPDR-NAVSWNALISAHADNGD 533
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 6/185 (3%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM- 177
N N +I+ + +G ++ A LFD MP R + +W+ L+ + N + EA LF+QM
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLT--VPLGTALINMY 235
+ +P D V +++ + VHA+ + G + + L+ Y
Sbjct: 138 RSSSCTLP---DHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSY 194
Query: 236 SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
+D + +FEE+P ++ VT+ +LITG G E++ F MR++G +P ++
Sbjct: 195 CEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFS 254
Query: 296 AALVA 300
L A
Sbjct: 255 GVLKA 259
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 105/254 (41%), Gaps = 10/254 (3%)
Query: 75 LFSHMHRTGVTVDHFTFPLIXXXXXXXXXX---XXXXXXXXXXGFASNIFVQNALINAYG 131
LF+ M + + D TF + G N+F + L++ Y
Sbjct: 439 LFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA 498
Query: 132 SSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGV 191
GS+ AV +F+EMP R+ SW+ LI +NG A+ F +M Q D V
Sbjct: 499 KCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQ----PDSV 554
Query: 192 MMLSVISAVSSLGALELGI-WVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEE 250
+L V++A S G +E G + A G+ ++++ R G + K+ +E
Sbjct: 555 SILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDE 614
Query: 251 MPHR-NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVED 309
MP + + W+S++ +H A RA + D AAY + + G E
Sbjct: 615 MPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEK 674
Query: 310 GWRVFESMRSEYGV 323
V ++MR E G+
Sbjct: 675 VRDVKKAMR-ERGI 687
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 355 bits (911), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 211/609 (34%), Positives = 315/609 (51%), Gaps = 64/609 (10%)
Query: 6 NLHATLIKTGQHNNPLS-----LRTFFLRCAELPSADTASYAAAVLLRFPI--PDPTPYN 58
LHA L +G P S L F+ E+ +A + P+ D +
Sbjct: 27 ELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQK------LFDEIPLSEKDNVDWT 80
Query: 59 TVIRHLALHSPTL-ATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXX---XXXXX 114
T++ + + + + LF M R V +D + +
Sbjct: 81 TLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKM 140
Query: 115 GFASNIFVQNALINAYGSSG-------------------------------SLNLAVHLF 143
G +++ V NAL++ YG G L +F
Sbjct: 141 GVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVF 200
Query: 144 DEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSL 203
EMP+R+ +W+ ++ + G+ E L L +M + + V + S++SA +
Sbjct: 201 HEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVF---RCGHGLNFVTLCSMLSACAQS 257
Query: 204 GALELGIWVHAYIRRAGLGL-------TVPLGTALINMYSRCGSIDRSVKVFEEMPHRNV 256
G L +G WVH Y + + + V +GTAL++MY++CG+ID S+ VF M RNV
Sbjct: 258 GNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNV 317
Query: 257 VTWTSLITGLAVHGRSREALRAFRDM-REAGLRPDGAAYTAALVACSHGGLVEDGWRVFE 315
VTW +L +GLA+HG+ R + F M RE ++PD +TA L ACSH G+V++GWR F
Sbjct: 318 VTWNALFSGLAMHGKGRMVIDMFPQMIRE--VKPDDLTFTAVLSACSHSGIVDEGWRCFH 375
Query: 316 SMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDL 375
S+R YG+ P ++HY CMVDLLGRAG++ EA + +MP+ PN V+ +LLG+C H +
Sbjct: 376 SLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKV 434
Query: 376 VLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHI 435
+AE+ K + ++ P + +L+SN Y +R S+R+ I K PGLS +++
Sbjct: 435 EIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYV 494
Query: 436 DQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHDIQE--EEKEHSLGY 493
+ VH F SGD SHP+ +EI L V++ I+ GY P+ S ++ + EEKE +L
Sbjct: 495 NDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCC 554
Query: 494 HSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSK 553
HSEKLAV F LL + + V KNLRIC DCHS MK VS ++D++IIIRDRNRFH F
Sbjct: 555 HSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKG 614
Query: 554 GSCSCGDFW 562
GSCSC D+W
Sbjct: 615 GSCSCSDYW 623
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 92/206 (44%), Gaps = 17/206 (8%)
Query: 206 LELGIWVHAYIRRAGLGLTVP---LGTALINMYSRCGSIDRSVKVFEEMP--HRNVVTWT 260
L G +HA + +GL P L AL Y+ G + + K+F+E+P ++ V WT
Sbjct: 22 LRPGKELHAVLTTSGLK-KAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWT 80
Query: 261 SLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSH---GGLVEDGWRVFESM 317
+L++ + +G +++ F +MR + D + C+ G + G V M
Sbjct: 81 TLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKM 140
Query: 318 RSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVL 377
GV ++ ++D+ G+ G++ E + E++ K + V W +L V L
Sbjct: 141 ----GVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEK-SVVSWTVVLDTVVKWEGL-- 193
Query: 378 AEKAKERVNELDPHHDGDYVLLSNAY 403
E+ +E +E+ + + ++ Y
Sbjct: 194 -ERGREVFHEMPERNAVAWTVMVAGY 218
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 353 bits (906), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/501 (38%), Positives = 281/501 (56%), Gaps = 12/501 (2%)
Query: 70 TLATTLFSHMHRTG-VTVDHFTFPLIXXXXXXXX---XXXXXXXXXXXXGFASNIFVQNA 125
T A LFS M G V +HFTF G ASN V N+
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413
Query: 126 LINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVP 185
+I+ + S + A F+ + +++L S++T + N +A L ++ + V
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473
Query: 186 ESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSV 245
T S++S V+++G++ G +H+ + + GL P+ ALI+MYS+CGSID +
Sbjct: 474 AFT----FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTAS 529
Query: 246 KVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGG 305
+VF M +RNV++WTS+ITG A HG + L F M E G++P+ Y A L ACSH G
Sbjct: 530 RVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 589
Query: 306 LVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTL 365
LV +GWR F SM ++ + P +EHY CMVDLL RAG+L +AF+F+ MP + + ++WRT
Sbjct: 590 LVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTF 649
Query: 366 LGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIV 425
LGAC H++ L + A ++ ELDP+ Y+ LSN Y +R M+E +V
Sbjct: 650 LGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLV 709
Query: 426 KEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHDIQEE 485
KE G S + + +H+F GD +HP +I L ++ IK GY P+T VLH ++EE
Sbjct: 710 KEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEE 769
Query: 486 EKEHS----LGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDII 541
E L HSEK+AVAF L+ + +RV KNLR+C DCH+ MK++S + ++I+
Sbjct: 770 NDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIV 829
Query: 542 IRDRNRFHHFSKGSCSCGDFW 562
+RD NRFHHF G CSC D+W
Sbjct: 830 LRDLNRFHHFKDGKCSCNDYW 850
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 104/194 (53%), Gaps = 12/194 (6%)
Query: 116 FASNIFVQNALINAY-GSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
F S++ V +LI+ + S A +FD+M + ++ +W+ +I G+P EA+ F
Sbjct: 198 FESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFF 257
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M L + +D + SV SA + L L LG +H++ R+GL V +L++M
Sbjct: 258 LDMVLSGFE----SDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE--CSLVDM 311
Query: 235 YSRC---GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGR-SREALRAFRDMREAG-LRP 289
Y++C GS+D KVF+ M +V++WT+LITG + + EA+ F +M G + P
Sbjct: 312 YAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEP 371
Query: 290 DGAAYTAALVACSH 303
+ +++A AC +
Sbjct: 372 NHFTFSSAFKACGN 385
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 11/186 (5%)
Query: 124 NALINAYGSSGSLNLAVHLFDEM---PQRDLASWSTLIVCFTNNGYPAEALSLFQQ-MQL 179
N+LI+ Y SG A +F+ M +RD+ SWS ++ C+ NNG +A+ +F + ++L
Sbjct: 101 NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLEL 160
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAG-LGLTVPLGTALINMYSRC 238
G VP + +VI A S+ + +G ++ + G V +G +LI+M+ +
Sbjct: 161 G--LVP---NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKG 215
Query: 239 -GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
S + + KVF++M NVVTWT +IT G REA+R F DM +G D ++
Sbjct: 216 ENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV 275
Query: 298 LVACSH 303
AC+
Sbjct: 276 FSACAE 281
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 7/188 (3%)
Query: 189 DGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVF 248
D V S++ + LG VHA + + L +LI++YS+ G ++ VF
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 249 EEMPH---RNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGG 305
E M R+VV+W++++ +GR +A++ F + E GL P+ YTA + ACS+
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSD 180
Query: 306 LVEDGWRVFESMRSEYGVYPMLEHYGC-MVDLLGRAGMLLE-AFKFVEDMPIKPNSVIWR 363
V G RV + G + GC ++D+ + E A+K + M + N V W
Sbjct: 181 FVGVG-RVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS-ELNVVTWT 238
Query: 364 TLLGACVN 371
++ C+
Sbjct: 239 LMITRCMQ 246
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 352 bits (902), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 177/448 (39%), Positives = 262/448 (58%), Gaps = 5/448 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G N+ V N+LI+ Y ++ A +F ++ R L SW+ +I+ F NG P +AL+ F
Sbjct: 367 GLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYF 426
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
QM+ D +SVI+A++ L W+H + R+ L V + TAL++M
Sbjct: 427 SQMR----SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDM 482
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y++CG+I + +F+ M R+V TW ++I G HG + AL F +M++ ++P+G +
Sbjct: 483 YAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTF 542
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
+ + ACSH GLVE G + F M+ Y + ++HYG MVDLLGRAG L EA+ F+ MP
Sbjct: 543 LSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP 602
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
+KP ++ +LGAC H ++ AEKA ER+ EL+P G +VLL+N Y
Sbjct: 603 VKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQ 662
Query: 415 VRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPN 474
VR SM + K PG S+V I VH F SG +HP ++I FL ++ IK GY P+
Sbjct: 663 VRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPD 722
Query: 475 TSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSG 534
T+ VL ++ + KE L HSEKLA++F LL I V KNLR+C DCH+ K++S
Sbjct: 723 TNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISL 781
Query: 535 IFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
+ ++I++RD RFHHF G+CSCGD+W
Sbjct: 782 VTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 118/209 (56%), Gaps = 5/209 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF+ ++F L N Y +N A +FD MP+RDL SW+T++ ++ NG AL +
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+ M + + S + ++SV+ AVS+L + +G +H Y R+G V + TAL++M
Sbjct: 225 KSM--CEENLKPSF--ITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y++CGS++ + ++F+ M RNVV+W S+I + +EA+ F+ M + G++P +
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGV 323
AL AC+ G +E G R + E G+
Sbjct: 341 MGALHACADLGDLERG-RFIHKLSVELGL 368
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 148/297 (49%), Gaps = 38/297 (12%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF S + + AL++ Y GSL A LFD M +R++ SW+++I + N P EA+ +F
Sbjct: 266 GFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIF 325
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
Q+M L + P TD V ++ + A + LG LE G ++H GL V + +LI+M
Sbjct: 326 QKM-LDEGVKP--TD-VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISM 381
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y +C +D + +F ++ R +V+W ++I G A +GR +AL F MR ++PD Y
Sbjct: 382 YCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTY 441
Query: 295 TAALVACS-----------HGGLVEDGW--RVFES-----MRSEYG-------VYPMLEH 329
+ + A + HG ++ VF + M ++ G ++ M+
Sbjct: 442 VSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSE 501
Query: 330 -----YGCMVDLLGRAGMLLEAFKFVEDM---PIKPNSVIWRTLLGACVNHNDLVLA 378
+ M+D G G A + E+M IKPN V + +++ AC +H+ LV A
Sbjct: 502 RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISAC-SHSGLVEA 557
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 125/261 (47%), Gaps = 8/261 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G F Q L++ + GS++ A +F+ + + + T++ F +AL F
Sbjct: 64 GLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFF 123
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+M+ D + P + +L V L +G +H + ++G L + T L NM
Sbjct: 124 VRMRYDDVE-PVVYNFTYLLKV---CGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y++C ++ + KVF+ MP R++V+W +++ G + +G +R AL + M E L+P
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239
Query: 295 TAALVACSHGGLVEDGWRVFE-SMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+ L A S L+ G + +MRS G ++ +VD+ + G L A + + M
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRS--GFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 354 PIKPNSVIWRTLLGACVNHND 374
++ N V W +++ A V + +
Sbjct: 298 -LERNVVSWNSMIDAYVQNEN 317
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 352 bits (902), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 197/566 (34%), Positives = 308/566 (54%), Gaps = 21/566 (3%)
Query: 7 LHATLIKTGQHNNPLSLRT----FFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVI- 61
+HA +IKT ++ LRT F+ +C D A VL P + + +I
Sbjct: 74 VHAHMIKT-RYLPATYLRTRLLIFYGKC------DCLEDARKVLDEMPEKNVVSWTAMIS 126
Query: 62 RHLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXX---XXXXXGFAS 118
R+ + A T+F+ M R+ + FTF + + S
Sbjct: 127 RYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDS 186
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
+IFV ++L++ Y +G + A +F+ +P+RD+ S + +I + G EAL +F ++
Sbjct: 187 HIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLH 246
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
S + V S+++A+S L L+ G H ++ R L L +LI+MYS+C
Sbjct: 247 ----SEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKC 302
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMR-EAGLRPDGAAYTAA 297
G++ + ++F+ MP R ++W +++ G + HG RE L FR MR E ++PD A
Sbjct: 303 GNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAV 362
Query: 298 LVACSHGGLVEDGWRVFESMRS-EYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIK 356
L CSHG + + G +F+ M + EYG P EHYGC+VD+LGRAG + EAF+F++ MP K
Sbjct: 363 LSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
Query: 357 PNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVR 416
P + + +LLGAC H + + E R+ E++P + G+YV+LSN Y VR
Sbjct: 423 PTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVR 482
Query: 417 NSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTS 476
M + + KEPG S + +Q +H F + D +HP+ EE++ + + +K GY P+ S
Sbjct: 483 AMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLS 542
Query: 477 SVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIF 536
VL+D+ EE+KE L HSEKLA+ F L+ + IRV KNLRIC DCH+F K S +F
Sbjct: 543 CVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVF 602
Query: 537 DKDIIIRDRNRFHHFSKGSCSCGDFW 562
++++ +RD+NRFH G CSCGD+W
Sbjct: 603 EREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
Query: 195 SVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR 254
++++A AL G VHA++ + L T L+ Y +C ++ + KV +EMP +
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 255 NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVF 314
NVV+WT++I+ + G S EAL F +M + +P+ + L +C + G ++
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQI- 175
Query: 315 ESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
+ ++ + ++D+ +AG + EA + E +P
Sbjct: 176 HGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 351 bits (901), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 264/442 (59%), Gaps = 9/442 (2%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD-- 181
NA+I +G G ++ A +FD M RD A+W +I + G+ EAL LF QMQ
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVR 328
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSI 241
P P ++S++S ++L +L+ G VHA++ R V + + L+ MY +CG +
Sbjct: 329 PSFPS------LISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGEL 382
Query: 242 DRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVAC 301
++ VF+ ++++ W S+I+G A HG EAL+ F +M +G P+ A L AC
Sbjct: 383 VKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTAC 442
Query: 302 SHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVI 361
S+ G +E+G +FESM S++ V P +EHY C VD+LGRAG + +A + +E M IKP++ +
Sbjct: 443 SYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATV 502
Query: 362 WRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRE 421
W LLGAC H+ L LAE A +++ E +P + G YVLLS+ VR +MR
Sbjct: 503 WGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRT 562
Query: 422 NRIVKEPGLSVVHIDQVVHEFVSGD-NSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLH 480
N + K PG S + + + VH F G +HP+ I+ L ++ GY+P+ S VLH
Sbjct: 563 NNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLH 622
Query: 481 DIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDI 540
D+ EEEK SL HSE+LAVA+ LL + IRV+KNLR+C DCH+ +K +S + +++I
Sbjct: 623 DVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREI 682
Query: 541 IIRDRNRFHHFSKGSCSCGDFW 562
I+RD NRFHHF+ G CSC D+W
Sbjct: 683 ILRDANRFHHFNNGECSCRDYW 704
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 26/252 (10%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N+ N L++ Y + + A ++F+ MP+R++ SW+ ++ + G EA SLF +M
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM- 136
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
P+ E + VM +I A +L + V T +I R
Sbjct: 137 ---PERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK--------DVVASTNMIGGLCRE 185
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G +D + +F+EM RNVVTWT++ITG + R A + F M E ++T+ L
Sbjct: 186 GRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPE----KTEVSWTSML 241
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGC--MVDLLGRAGMLLEAFKFVEDMPIK 356
+ + G +ED FE M PM C M+ G G + +A + + M +
Sbjct: 242 LGYTLSGRIEDAEEFFEVM-------PMKPVIACNAMIVGFGEVGEISKARRVFDLMEDR 294
Query: 357 PNSVIWRTLLGA 368
N+ WR ++ A
Sbjct: 295 DNAT-WRGMIKA 305
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 29/238 (12%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N++++ Y S+G A LFDEM +R++ SW+ L+ + N EA ++F+ M
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELM------ 105
Query: 184 VPEST--DGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSI 241
PE M+ +G E W R + TV G + + G I
Sbjct: 106 -PERNVVSWTAMVKGYMQEGMVGEAESLFWRMP--ERNEVSWTVMFGGLIDD-----GRI 157
Query: 242 DRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVAC 301
D++ K+++ MP ++VV T++I GL GR EA F +MRE + +T +
Sbjct: 158 DKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV----VTWTTMITGY 213
Query: 302 SHGGLVEDGWRVFESM--RSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
V+ ++FE M ++E ML Y +G + +A +F E MP+KP
Sbjct: 214 RQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTL-------SGRIEDAEEFFEVMPMKP 264
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 8/180 (4%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
F +++V + L+ Y G L A +FD +D+ W+++I + ++G EAL +F
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFH 421
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIR-RAGLGLTVPLGTALINM 234
+M P + V ++++++A S G LE G+ + + + + TV + ++M
Sbjct: 422 EM----PSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Query: 235 YSRCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
R G +D+++++ E M + + W +L+ H R A A + + E PD A
Sbjct: 478 LGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEN--EPDNAG 535
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 349 bits (895), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 200/538 (37%), Positives = 288/538 (53%), Gaps = 15/538 (2%)
Query: 22 SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLALHS-PTLATTLFSHMH 80
+L + +C L A V + P D + T+I + H P A F+ M
Sbjct: 100 TLLNMYAKCGSLEEARK------VFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 81 RTGVTVDHFTFPLIXXXXXXXXXXX---XXXXXXXXXGFASNIFVQNALINAYGSSGSLN 137
R G + + FT + GF SN+ V +AL++ Y G ++
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213
Query: 138 LAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVI 197
A +FD + R+ SW+ LI +AL LFQ M L D P S+
Sbjct: 214 DAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM-LRDGFRPSH---FSYASLF 269
Query: 198 SAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVV 257
A SS G LE G WVHAY+ ++G L G L++MY++ GSI + K+F+ + R+VV
Sbjct: 270 GACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV 329
Query: 258 TWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESM 317
+W SL+T A HG +EA+ F +MR G+RP+ ++ + L ACSH GL+++GW +E M
Sbjct: 330 SWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELM 389
Query: 318 RSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVL 377
+ + G+ P HY +VDLLGRAG L A +F+E+MPI+P + IW+ LL AC H + L
Sbjct: 390 KKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTEL 448
Query: 378 AEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQ 437
A E V ELDP G +V+L N Y VR M+E+ + KEP S V I+
Sbjct: 449 GAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIEN 508
Query: 438 VVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHDIQEEEKEHSLGYHSEK 497
+H FV+ D HPQ EEI + V+ IK GY P+TS V+ + ++E+E +L YHSEK
Sbjct: 509 AIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEK 568
Query: 498 LAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSKGS 555
+A+AF LL I + KN+R+C DCH+ +K S + ++II+RD NRFHHF S
Sbjct: 569 IALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDAS 626
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 131/257 (50%), Gaps = 6/257 (2%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
F +I + N L+N Y GSL A +F++MPQRD +W+TLI ++ + P +AL F
Sbjct: 91 FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFN 150
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMY 235
QM + S + + SVI A ++ G +H + + G V +G+AL+++Y
Sbjct: 151 QML----RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLY 206
Query: 236 SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
+R G +D + VF+ + RN V+W +LI G A + +AL F+ M G RP +Y
Sbjct: 207 TRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYA 266
Query: 296 AALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPI 355
+ ACS G +E G V M + G + ++D+ ++G + +A K + +
Sbjct: 267 SLFGACSSTGFLEQGKWVHAYM-IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA- 324
Query: 356 KPNSVIWRTLLGACVNH 372
K + V W +LL A H
Sbjct: 325 KRDVVSWNSLLTAYAQH 341
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 26/172 (15%)
Query: 209 GIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAV 268
G VHA+I ++ + +G L+NMY++CGS++ + KVFE+MP R+ VTWT+LI+G +
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 269 HGRSREALRAFRDMREAGLRPDGAAYTAALVACS-----------HGGLVEDGWRVFESM 317
H R +AL F M G P+ ++ + A + HG V+ G F+S
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG---FDSN 195
Query: 318 RSEYGVYPMLEHYG-CMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGA 368
H G ++DL R G++ +A + V D N V W L+
Sbjct: 196 ----------VHVGSALLDLYTRYGLMDDA-QLVFDALESRNDVSWNALIAG 236
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 345 bits (885), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 175/491 (35%), Positives = 271/491 (55%), Gaps = 7/491 (1%)
Query: 75 LFSHMHRTGVTVDHFTFPLIXXX---XXXXXXXXXXXXXXXXXGFASNIFVQNALINAYG 131
LF+ MH+ G D FT + G+ +++V + +++ Y
Sbjct: 504 LFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYV 563
Query: 132 SSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGV 191
G ++ A FD +P D +W+T+I NG A +F QM+L E T
Sbjct: 564 KCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFT--- 620
Query: 192 MMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEM 251
+ ++ A S L ALE G +HA + +GT+L++MY++CGSID + +F+ +
Sbjct: 621 -IATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRI 679
Query: 252 PHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGW 311
N+ W +++ GLA HG +E L+ F+ M+ G++PD + L ACSH GLV + +
Sbjct: 680 EMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAY 739
Query: 312 RVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVN 371
+ SM +YG+ P +EHY C+ D LGRAG++ +A +E M ++ ++ ++RTLL AC
Sbjct: 740 KHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRV 799
Query: 372 HNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLS 431
D ++ ++ EL+P YVLLSN Y R M+ +++ K+PG S
Sbjct: 800 QGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFS 859
Query: 432 VVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHDIQEEEKEHSL 491
+ + +H FV D S+ Q E I + + ++ IK GY P T L D++EEEKE +L
Sbjct: 860 WIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERAL 919
Query: 492 GYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHF 551
YHSEKLAVAF LL IRVIKNLR+C DCH+ MK+++ +++++I++RD NRFH F
Sbjct: 920 YYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRF 979
Query: 552 SKGSCSCGDFW 562
G CSCGD+W
Sbjct: 980 KDGICSCGDYW 990
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 154/378 (40%), Gaps = 52/378 (13%)
Query: 41 YAAAVLLRFPIPDPTPYNTVIRHLALHSPTL-ATTLFSHMHRTGVTVDHFTFPLIXXXXX 99
+A V D +N+VI +A + + A LF + R G+ D +T +
Sbjct: 368 FARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Query: 100 XXXXXXXXXXXXXXXGF----ASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWS 155
S+ FV ALI+AY + + A LF E DL +W+
Sbjct: 428 SLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWN 486
Query: 156 TLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAY 215
++ +T + + L LF M + E +D + +V L A+ G VHAY
Sbjct: 487 AMMAGYTQSHDGHKTLKLFALMH----KQGERSDDFTLATVFKTCGFLFAINQGKQVHAY 542
Query: 216 IRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREA 275
++G L + + + +++MY +CG + + F+ +P + V WT++I+G +G A
Sbjct: 543 AIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERA 602
Query: 276 LRAFRDMREAGLRPDG------AAYTAALVACSHGGLVE-------------------DG 310
F MR G+ PD A ++ L A G + D
Sbjct: 603 FHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDM 662
Query: 311 WRVFESMRSEYGVYPMLEHYGCMVDLLGRAGML------------LEAFKFVEDMPIKPN 358
+ S+ Y ++ +E M+++ ML L+ FK ++ + IKP+
Sbjct: 663 YAKCGSIDDAYCLFKRIE----MMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPD 718
Query: 359 SVIWRTLLGACVNHNDLV 376
V + +L AC +H+ LV
Sbjct: 719 KVTFIGVLSAC-SHSGLV 735
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 131/316 (41%), Gaps = 15/316 (4%)
Query: 66 LHSPTLATTL--FSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXX---XXXXXGFASNI 120
LHS + L F+ M + V D TF L+ G +
Sbjct: 291 LHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLML 350
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLG 180
V N+LIN Y A +FD M +RDL SW+++I NG EA+ LF Q+
Sbjct: 351 TVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQL--- 407
Query: 181 DPQVPESTDGVMMLSVISAVSSL-GALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
+ D M SV+ A SSL L L VH + + + TALI+ YSR
Sbjct: 408 -LRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
+ + +FE + ++V W +++ G + L+ F M + G R D
Sbjct: 467 CMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFK 525
Query: 300 ACSHGGLVEDGWRVFE-SMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
C + G +V +++S Y + + ++D+ + G + A + +P+ P+
Sbjct: 526 TCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPV-PD 582
Query: 359 SVIWRTLLGACVNHND 374
V W T++ C+ + +
Sbjct: 583 DVAWTTMISGCIENGE 598
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 118/268 (44%), Gaps = 14/268 (5%)
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPA-----EALSLFQ 175
F+ N LI+ Y GSL A +FD+MP RDL SW++++ + + +A LF+
Sbjct: 75 FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR 134
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMY 235
++ Q T + + ++ G + H Y + GL + AL+N+Y
Sbjct: 135 ILR----QDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIY 190
Query: 236 SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
+ G + +FEEMP+R+VV W ++ G EA+ +GL P+ T
Sbjct: 191 LKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPN--EIT 248
Query: 296 AALVACSHGGLVEDGW-RVFESMRSEYGVYPMLEHYGCMVDLL--GRAGMLLEAFKFVED 352
L+A G + G + F + V ++ + + L G+ LL+ F + +
Sbjct: 249 LRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVE 308
Query: 353 MPIKPNSVIWRTLLGACVNHNDLVLAEK 380
++ + V + +L V + L L ++
Sbjct: 309 SDVECDQVTFILMLATAVKVDSLALGQQ 336
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 4/142 (2%)
Query: 161 FTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAG 220
+ ++G + L F M D + + T ++ML+ V SL LG VH + G
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVT-FILMLATAVKVDSLA---LGQQVHCMALKLG 345
Query: 221 LGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFR 280
L L + + +LINMY + + VF+ M R++++W S+I G+A +G EA+ F
Sbjct: 346 LDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFM 405
Query: 281 DMREAGLRPDGAAYTAALVACS 302
+ GL+PD T+ L A S
Sbjct: 406 QLLRCGLKPDQYTMTSVLKAAS 427
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 171/444 (38%), Positives = 264/444 (59%), Gaps = 4/444 (0%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N++V AL++ Y G + AV +F+ M + +WS+++ + N EAL L+++ Q
Sbjct: 196 NLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQ 255
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
++ + + SVI A S+L AL G +HA I ++G G V + ++ ++MY++C
Sbjct: 256 ----RMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKC 311
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
GS+ S +F E+ +N+ W ++I+G A H R +E + F M++ G+ P+ +++ L
Sbjct: 312 GSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLL 371
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
C H GLVE+G R F+ MR+ YG+ P + HY CMVD+LGRAG+L EA++ ++ +P P
Sbjct: 372 SVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPT 431
Query: 359 SVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNS 418
+ IW +LL +C + +L LAE A E++ EL+P + G++VLLSN Y R
Sbjct: 432 ASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKL 491
Query: 419 MRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSV 478
+R+ + K G S + I VH F G++ HP+ EI L ++V + GY P+
Sbjct: 492 LRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHE 551
Query: 479 LHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDK 538
LHD++ +KE L HSEKLA+ F L+ + +R++KNLRIC DCH FMK S +
Sbjct: 552 LHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRR 611
Query: 539 DIIIRDRNRFHHFSKGSCSCGDFW 562
II+RD NRFHHFS G CSCGDFW
Sbjct: 612 FIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 141/271 (52%), Gaps = 14/271 (5%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
++ + N LINAY G + LA +FD M +R L SW+T+I +T N +EAL +F +M+
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 179 LGDPQVPESTDGVMMLSVISAVS-SLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
+ E T + SV+SA + ALE +H + + L + +GTAL+++Y++
Sbjct: 155 NEGFKFSEFT----ISSVLSACGVNCDALECK-KLHCLSVKTCIDLNLYVGTALLDLYAK 209
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
CG I +V+VFE M ++ VTW+S++ G + EAL +R + L + ++
Sbjct: 210 CGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSV 269
Query: 298 LVACSHGGLVEDGWRVFESM-RSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIK 356
+ ACS+ + +G ++ + +S +G + VD+ + G L E++ ++ K
Sbjct: 270 ICACSNLAALIEGKQMHAVICKSGFGSNVFVASSA--VDMYAKCGSLRESYIIFSEVQEK 327
Query: 357 PNSVIWRTLLGACVNHND----LVLAEKAKE 383
N +W T++ H ++L EK ++
Sbjct: 328 -NLELWNTIISGFAKHARPKEVMILFEKMQQ 357
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 8/181 (4%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF SN+FV ++ ++ Y GSL + +F E+ +++L W+T+I F + P E + LF
Sbjct: 293 GFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILF 352
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRA-GLGLTVPLGTALIN 233
++MQ D P + V S++S G +E G +R GL V + +++
Sbjct: 353 EKMQ-QDGMHP---NEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVD 408
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVT-WTSLITGLAVHGRSREALRAFRDMREAGLRPDGA 292
+ R G + + ++ + +P + W SL+ V+ A A + E L P+ A
Sbjct: 409 ILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFE--LEPENA 466
Query: 293 A 293
Sbjct: 467 G 467
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 204 GALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLI 263
GA+ H I R L V L LIN YS+CG ++ + +VF+ M R++V+W ++I
Sbjct: 75 GAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMI 134
Query: 264 TGLAVHGR-SREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDG--WRVFESMRSE 320
GL R EAL F +MR G + ++ L AC G+ D + + +
Sbjct: 135 -GLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC---GVNCDALECKKLHCLSVK 190
Query: 321 YGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACV---NHNDLVL 377
+ L ++DL + GM+ +A + E M K +SV W +++ V N+ + +L
Sbjct: 191 TCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK-SSVTWSSMVAGYVQNKNYEEALL 249
Query: 378 AEKAKERVN 386
+ +R++
Sbjct: 250 LYRRAQRMS 258
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 190/528 (35%), Positives = 281/528 (53%), Gaps = 9/528 (1%)
Query: 40 SYAAAVLLRFPIPDPTPYNTVIRHLALHS-PTLATTLFSHMHRTGVTVDHFTFPLIXXXX 98
S A V P D P++ +I + A LF M V + FT I
Sbjct: 299 SDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGC 358
Query: 99 XXXXXXXXXXXX---XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWS 155
GF +I+V NALI+ Y ++ AV LF E+ ++ SW+
Sbjct: 359 AIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWN 418
Query: 156 TLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAY 215
T+IV + N G +A S+F++ V E T S + A +SL +++LG+ VH
Sbjct: 419 TVIVGYENLGEGGKAFSMFREALRNQVSVTEVT----FSSALGACASLASMDLGVQVHGL 474
Query: 216 IRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREA 275
+ V + +LI+MY++CG I + VF EM +V +W +LI+G + HG R+A
Sbjct: 475 AIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQA 534
Query: 276 LRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVD 335
LR M++ +P+G + L CS+ GL++ G FESM ++G+ P LEHY CMV
Sbjct: 535 LRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVR 594
Query: 336 LLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGD 395
LLGR+G L +A K +E +P +P+ +IWR +L A +N N+ A ++ E + +++P +
Sbjct: 595 LLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEAT 654
Query: 396 YVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEI 455
YVL+SN Y +R SM+E + KEPGLS + VH F G + HP + I
Sbjct: 655 YVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLI 714
Query: 456 MKFLVSVVDTIKLGGYAPNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYH-RDRKAIR 514
L + GY P+ ++VL D+ +EEK+ L HSE+LA+A+ L+ R I
Sbjct: 715 NGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRIL 774
Query: 515 VIKNLRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
++KNLRIC DCHS MK +S I +D++IRD NRFHHF G CSCGD W
Sbjct: 775 IMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 121/255 (47%), Gaps = 12/255 (4%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G+ SN FV ALINAY GS++ A +F+ + +D+ W+ ++ C+ NGY ++L L
Sbjct: 176 GYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLL 235
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M++ T + + A LGA + VH I + L +G L+ +
Sbjct: 236 SCMRMAGFMPNNYT----FDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQL 291
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y++ G + + KVF EMP +VV W+ +I +G EA+ F MREA + P+
Sbjct: 292 YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTL 351
Query: 295 TAALVACSHG---GLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVE 351
++ L C+ G GL E + + + +Y ++D+ + + A K
Sbjct: 352 SSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYV----SNALIDVYAKCEKMDTAVKLFA 407
Query: 352 DMPIKPNSVIWRTLL 366
++ K N V W T++
Sbjct: 408 ELSSK-NEVSWNTVI 421
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 4/178 (2%)
Query: 125 ALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQV 184
L+ Y G ++ A +F+EMP+ D+ WS +I F NG+ EA+ LF +M+
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP 346
Query: 185 PESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRS 244
E T + S+++ + LG +H + + G L + + ALI++Y++C +D +
Sbjct: 347 NEFT----LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTA 402
Query: 245 VKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACS 302
VK+F E+ +N V+W ++I G G +A FR+ + +++AL AC+
Sbjct: 403 VKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACA 460
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 26/261 (9%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAE-ALSL 173
G ++F N L+NAY +G A++LFDEMP+R+ S+ TL GY + + L
Sbjct: 79 GSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLA-----QGYACQDPIGL 133
Query: 174 FQQM-QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALI 232
+ ++ + G P + L V SL E+ W+H+ I + G +G ALI
Sbjct: 134 YSRLHREGHELNPHVFTSFLKLFV-----SLDKAEICPWLHSPIVKLGYDSNAFVGAALI 188
Query: 233 NMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGA 292
N YS CGS+D + VFE + +++V W +++ +G ++L+ MR AG P+
Sbjct: 189 NAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNY 248
Query: 293 AYTAALVACSHGGLVEDGWRVFESMRSEYG-----VYPMLEHYGC-MVDLLGRAGMLLEA 346
+ AL A G F+ + +G Y + G ++ L + G + +A
Sbjct: 249 TFDTALKA-------SIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDA 301
Query: 347 FKFVEDMPIKPNSVIWRTLLG 367
FK +MP K + V W ++
Sbjct: 302 FKVFNEMP-KNDVVPWSFMIA 321
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 343 bits (881), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 178/440 (40%), Positives = 263/440 (59%), Gaps = 5/440 (1%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
AL++ Y G +N A ++F + RD+ +W+ +IV + +G EA++LF+ M +G Q
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM-VGGGQ 409
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
P S + +++S SSL +L G +H ++G +V + ALI MY++ G+I
Sbjct: 410 RPNS---YTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITS 466
Query: 244 SVKVFEEMP-HRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACS 302
+ + F+ + R+ V+WTS+I LA HG + EAL F M GLRPD Y AC+
Sbjct: 467 ASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACT 526
Query: 303 HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIW 362
H GLV G + F+ M+ + P L HY CMVDL GRAG+L EA +F+E MPI+P+ V W
Sbjct: 527 HAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTW 586
Query: 363 RTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMREN 422
+LL AC H ++ L + A ER+ L+P + G Y L+N Y +R SM++
Sbjct: 587 GSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDG 646
Query: 423 RIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHDI 482
R+ KE G S + + VH F D +HP+ EI + + D IK GY P+T+SVLHD+
Sbjct: 647 RVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDL 706
Query: 483 QEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDIII 542
+EE KE L +HSEKLA+AF L+ D+ +R++KNLR+C DCH+ +K +S + ++II+
Sbjct: 707 EEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIV 766
Query: 543 RDRNRFHHFSKGSCSCGDFW 562
RD RFHHF G CSC D+W
Sbjct: 767 RDTTRFHHFKDGFCSCRDYW 786
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 137/293 (46%), Gaps = 40/293 (13%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
NA+I + G ++LA+ F++M +RD+ +W+++I F GY AL +F +M L D
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM-LRDSL 274
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
+ S D + SV+SA ++L L +G +H++I G ++ + ALI+MYSRCG ++
Sbjct: 275 L--SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 244 SVKVFEE---------------------------------MPHRNVVTWTSLITGLAVHG 270
+ ++ E+ + R+VV WT++I G HG
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392
Query: 271 RSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHY 330
EA+ FR M G RP+ A L S + G ++ S +Y +
Sbjct: 393 SYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS-VSVS 451
Query: 331 GCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKE 383
++ + +AG + A + + + + ++V W +++ A H AE+A E
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGH---AEEALE 501
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 36/215 (16%)
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLG 180
F N +++AY G ++ FD++PQRD SW+T+IV + N G +A+ + M
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 181 DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC-- 238
+ + T + +V+++V++ +E G VH++I + GL V + +L+NMY++C
Sbjct: 141 GIEPTQFT----LTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 239 -----------------------------GSIDRSVKVFEEMPHRNVVTWTSLITGLAVH 269
G +D ++ FE+M R++VTW S+I+G
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256
Query: 270 GRSREALRAFRDM-REAGLRPDGAAYTAALVACSH 303
G AL F M R++ L PD + L AC++
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACAN 291
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 83/170 (48%), Gaps = 7/170 (4%)
Query: 225 VPLGTA-----LINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAF 279
+PL TA +++ YS+ G +D + + F+++P R+ V+WT++I G G+ +A+R
Sbjct: 75 MPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVM 134
Query: 280 RDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGR 339
DM + G+ P T L + + +E G +V S + G+ + ++++ +
Sbjct: 135 GDMVKEGIEPTQFTLTNVLASVAATRCMETGKKV-HSFIVKLGLRGNVSVSNSLLNMYAK 193
Query: 340 AGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELD 389
G + A KFV D + + W ++ + + LA E++ E D
Sbjct: 194 CGDPMMA-KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 178/441 (40%), Positives = 263/441 (59%), Gaps = 8/441 (1%)
Query: 126 LINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVP 185
LI AY G++ A LF+ +P +D+ +W+ ++ F N P EAL F +M+ +
Sbjct: 221 LIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRA- 279
Query: 186 ESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLT--VPLGTALINMYSRCGSIDR 243
D V + ISA + LGA + +++G + V +G+ALI+MYS+CG+++
Sbjct: 280 ---DEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEE 336
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM-REAGLRPDGAAYTAALVACS 302
+V VF M ++NV T++S+I GLA HGR++EAL F M + ++P+ + AL+ACS
Sbjct: 337 AVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACS 396
Query: 303 HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIW 362
H GLV+ G +VF+SM +GV P +HY CMVDLLGR G L EA + ++ M ++P+ +W
Sbjct: 397 HSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVW 456
Query: 363 RTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMREN 422
LLGAC HN+ +AE A E + EL+P G+Y+LLSN Y VR ++E
Sbjct: 457 GALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEK 516
Query: 423 RIVKEPGLS-VVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHD 481
+ K P +S VV + +H+F G+ +HP +I L +V+ + + GY P+ SSV +D
Sbjct: 517 GLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYD 576
Query: 482 IQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDII 541
+ + K L H+EKLA+AF LL I ++KNLR+C DCH FM+ S + K II
Sbjct: 577 VSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVII 636
Query: 542 IRDRNRFHHFSKGSCSCGDFW 562
+RD RFHHF G CSCGDFW
Sbjct: 637 MRDNMRFHHFRSGDCSCGDFW 657
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 118/295 (40%), Gaps = 82/295 (27%)
Query: 154 WSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVH 213
W+ +I + G EA++++ M+ + P S +++ A ++ L LG H
Sbjct: 117 WTAVIRGYAIEGKFDEAIAMYGCMR-KEEITPVS---FTFSALLKACGTMKDLNLGRQFH 172
Query: 214 AYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSL----------- 262
A R V +G +I+MY +C SID + KVF+EMP R+V++WT L
Sbjct: 173 AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNME 232
Query: 263 --------------------ITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVAC- 301
+TG A + + +EAL F M ++G+R D + AC
Sbjct: 233 CAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACA 292
Query: 302 ------------------------------------SHGGLVEDGWRVFESMRSEYGVYP 325
S G VE+ VF SM ++ V+
Sbjct: 293 QLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK-NVFT 351
Query: 326 MLEHYGCMVDLL---GRAGMLLEAFKF-VEDMPIKPNSVIWRTLLGACVNHNDLV 376
Y M+ L GRA L F + V IKPN+V + L AC +H+ LV
Sbjct: 352 ----YSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMAC-SHSGLV 401
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 4/180 (2%)
Query: 191 VMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG-SID-RSVKVF 248
+++ S+IS + L +H ++ R GL + + T LI ++ G +D + +V
Sbjct: 47 LLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVI 106
Query: 249 EEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVE 308
E + RN WT++I G A+ G+ EA+ + MR+ + P ++A L AC +
Sbjct: 107 EPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLN 166
Query: 309 DGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGA 368
G R F + + + M+D+ + + A K ++MP + + + W L+ A
Sbjct: 167 LG-RQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMP-ERDVISWTELIAA 224
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 342 bits (878), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 198/572 (34%), Positives = 311/572 (54%), Gaps = 18/572 (3%)
Query: 1 MNRVYNLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPI-PDPTPYNT 59
M ++ +H+ +I G ++P S+ LR + + S+A + F P + +N
Sbjct: 18 MKKLRKIHSHVIINGLQHHP-SIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNY 76
Query: 60 VIRHLALHSPTLATTLF-SHMHRTGVTV-DHFTFPLIXXXXXXXXXXXXXXX---XXXXX 114
+IR + S L + LF + M + V+ D FTF
Sbjct: 77 LIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRS 136
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF + V +L+ Y ++GS+ +A +FDEMP RDL SW+ +I CF++ G +ALS++
Sbjct: 137 GFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMY 196
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
++M G+ V D +++++S+ + + AL +G+ +H V + ALI+M
Sbjct: 197 KRM--GNEGV--CGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDM 252
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y++CGS++ ++ VF M R+V+TW S+I G VHG EA+ FR M +G+RP+ +
Sbjct: 253 YAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITF 312
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
L+ CSH GLV++G FE M S++ + P ++HYGCMVDL GRAG L + + +
Sbjct: 313 LGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASS 372
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
+ V+WRTLLG+C H +L L E A +++ +L+ + GDYVL+++ Y
Sbjct: 373 CHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFAS 432
Query: 415 VRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPN 474
+R +R + + PG S + I VH+FV D HP+ I L V++ L GY P
Sbjct: 433 MRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPE 492
Query: 475 ----TSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMK 530
T+ L D + S HSEKLA+A+ L+ +R+ KNLR+C DCHSF K
Sbjct: 493 DSNRTAPTLSDRCLGSADTS---HSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTK 549
Query: 531 HVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
+VS F+++II+RDR RFHHF+ G CSC D+W
Sbjct: 550 YVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 342 bits (876), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 195/561 (34%), Positives = 289/561 (51%), Gaps = 11/561 (1%)
Query: 6 NLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLA 65
+H+ +IKT N A+L DTA +L+RF D + T+I
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA---WDILIRFAGKDVVSWTTMIAGYT 567
Query: 66 LHS-PTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXX---XXXXXGFASNIF 121
++ A T F M G+ D GF+S++
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
QNAL+ Y G + + F++ D +W+ L+ F +G EAL +F +M
Sbjct: 628 FQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG 687
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSI 241
T G S + A S ++ G VHA I + G + ALI+MY++CGSI
Sbjct: 688 IDNNNFTFG----SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSI 743
Query: 242 DRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVAC 301
+ K F E+ +N V+W ++I + HG EAL +F M + +RP+ L AC
Sbjct: 744 SDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSAC 803
Query: 302 SHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVI 361
SH GLV+ G FESM SEYG+ P EHY C+VD+L RAG+L A +F+++MPIKP++++
Sbjct: 804 SHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALV 863
Query: 362 WRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRE 421
WRTLL ACV H ++ + E A + EL+P YVLLSN Y R M+E
Sbjct: 864 WRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKE 923
Query: 422 NRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHD 481
+ KEPG S + + +H F GD +HP +EI ++ + GY + S+L++
Sbjct: 924 KGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNE 983
Query: 482 IQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDII 541
+Q E+K+ + HSEKLA++F LL I V+KNLR+C DCH+++K VS + +++II
Sbjct: 984 LQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREII 1043
Query: 542 IRDRNRFHHFSKGSCSCGDFW 562
+RD RFHHF G+CSC D+W
Sbjct: 1044 VRDAYRFHHFEGGACSCKDYW 1064
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 137/320 (42%), Gaps = 10/320 (3%)
Query: 53 DPTPYNTVIRHLA-LHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXX---XXXX 108
D YNT+I L+ A LF MH G+ D T +
Sbjct: 353 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLH 412
Query: 109 XXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPA 168
GFASN ++ AL+N Y + A+ F E ++ W+ ++V +
Sbjct: 413 AYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLR 472
Query: 169 EALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLG 228
+ +F+QMQ+ + VP + S++ LG LELG +H+ I + L +
Sbjct: 473 NSFRIFRQMQI-EEIVP---NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC 528
Query: 229 TALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLR 288
+ LI+MY++ G +D + + ++VV+WT++I G + +AL FR M + G+R
Sbjct: 529 SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 289 PDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFK 348
D T A+ AC+ +++G ++ + G L +V L R G + E++
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647
Query: 349 FVEDMPIKPNSVIWRTLLGA 368
E N + W L+
Sbjct: 648 AFEQTEAGDN-IAWNALVSG 666
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 125/255 (49%), Gaps = 8/255 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G + V N LI+ Y +G ++LA +FD + +D +SW +I + N AEA+ LF
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 276
Query: 175 QQMQ-LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALIN 233
M LG P + SV+SA + +LE+G +H + + G + AL++
Sbjct: 277 CDMYVLGIMPTPYAFS-----SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVS 331
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
+Y G++ + +F M R+ VT+ +LI GL+ G +A+ F+ M GL PD
Sbjct: 332 LYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNT 391
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+ +VACS G + G ++ + ++ G + G +++L + + A + +
Sbjct: 392 LASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 354 PIKPNSVIWRTLLGA 368
++ N V+W +L A
Sbjct: 451 EVE-NVVLWNVMLVA 464
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 5/197 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G SN + L + Y G L A +FDEMP+R + +W+ +I + E LF
Sbjct: 115 GLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLF 174
Query: 175 QQMQLGDPQVPEST-DGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALIN 233
+M + E T GV+ +V A ++ +HA I GL + + LI+
Sbjct: 175 VRMVSENVTPNEGTFSGVLEACRGGSV----AFDVVEQIHARILYQGLRDSTVVCNPLID 230
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
+YSR G +D + +VF+ + ++ +W ++I+GL+ + EA+R F DM G+ P A
Sbjct: 231 LYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYA 290
Query: 294 YTAALVACSHGGLVEDG 310
+++ L AC +E G
Sbjct: 291 FSSVLSACKKIESLEIG 307
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 48/106 (45%)
Query: 204 GALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLI 263
G+L+ G +H+ I + GL L L + Y G + + KVF+EMP R + TW +I
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158
Query: 264 TGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVED 309
LA E F M + P+ ++ L AC G + D
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFD 204
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 341 bits (875), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 178/439 (40%), Positives = 253/439 (57%), Gaps = 4/439 (0%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
+ LI Y SG LN A LF+ MP++++ SW+TLI F+ G A+S + +M +
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
E T + +V+SA S GAL GI +H YI G+ L +GTAL++MY++CG +D
Sbjct: 291 PNEYT----IAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDC 346
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSH 303
+ VF M H+++++WT++I G AVHGR +A++ FR M +G +PD + A L AC +
Sbjct: 347 AATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLN 406
Query: 304 GGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWR 363
V+ G F+SMR +Y + P L+HY +VDLLGRAG L EA + VE+MPI P+ W
Sbjct: 407 SSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWA 466
Query: 364 TLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENR 423
L AC H AE + + ELDP G Y+ L + R S+++
Sbjct: 467 ALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRI 526
Query: 424 IVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHDIQ 483
+ G S + +D +++F +GD SH +EI L ++ GY P +HDI+
Sbjct: 527 KERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIE 586
Query: 484 EEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDIIIR 543
EEEKE+ G HSEKLA+ L IR+IKNLRIC DCHS MK+VS I +DI++R
Sbjct: 587 EEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLR 646
Query: 544 DRNRFHHFSKGSCSCGDFW 562
D +FHHF G CSCGD+W
Sbjct: 647 DARQFHHFKDGRCSCGDYW 665
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
+ AL++ Y G L+ A +F M +D+ SW+ +I + +G +A+ F+QM
Sbjct: 330 IGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSG 389
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIR-RAGLGLTVPLGTALINMYSRCGS 240
E D V+ L+V++A + ++LG+ +R + T+ ++++ R G
Sbjct: 390 ----EKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGK 445
Query: 241 IDRSVKVFEEMP-HRNVVTWTSLITGLAVHGRSREALRAFRDMRE 284
++ + ++ E MP + ++ TW +L H R A +++ E
Sbjct: 446 LNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLE 490
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 8/195 (4%)
Query: 187 STDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVK 246
S D +S+I A +L VHA I R G+ L+ + L++ S S D S+
Sbjct: 26 SPDESHFISLIHACKDTASLR---HVHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYSLS 81
Query: 247 VFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGL 306
+F RN +LI GL + R ++R F M G++PD + L + S G
Sbjct: 82 IFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGF 141
Query: 307 VEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP--IKPNSV-IWR 363
G + + + +VD+ + G L AF+ E+ P IK S+ IW
Sbjct: 142 RWLGRALHAATLKNFVDCDSFVRLS-LVDMYAKTGQLKHAFQVFEESPDRIKKESILIWN 200
Query: 364 TLLGACVNHNDLVLA 378
L+ D+ +A
Sbjct: 201 VLINGYCRAKDMHMA 215
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 181/452 (40%), Positives = 252/452 (55%), Gaps = 7/452 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEM--PQRDLASWSTLIVCFTNNGYPAEALS 172
G V N LI+ Y ++ A +FD + +RD+ +W+ +I ++ +G +AL
Sbjct: 402 GHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALE 461
Query: 173 LFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPL--GTA 230
L +M D Q + + + A +SL AL +G +HAY R VPL
Sbjct: 462 LLSEMFEEDCQT--RPNAFTISCALVACASLAALRIGKQIHAYALRNQQN-AVPLFVSNC 518
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
LI+MY++CGSI + VF+ M +N VTWTSL+TG +HG EAL F +MR G + D
Sbjct: 519 LIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLD 578
Query: 291 GAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFV 350
G L ACSH G+++ G F M++ +GV P EHY C+VDLLGRAG L A + +
Sbjct: 579 GVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLI 638
Query: 351 EDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXX 410
E+MP++P V+W L C H + L E A E++ EL +HDG Y LLSN Y
Sbjct: 639 EEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWK 698
Query: 411 XXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGG 470
+R+ MR + K PG S V + F GD +HP +EI + L+ + IK G
Sbjct: 699 DVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIG 758
Query: 471 YAPNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMK 530
Y P T LHD+ +EEK+ L HSEKLA+A+ +L AIR+ KNLR+C DCH+
Sbjct: 759 YVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFT 818
Query: 531 HVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
++S I D DII+RD +RFHHF GSCSC +W
Sbjct: 819 YMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 144/297 (48%), Gaps = 10/297 (3%)
Query: 35 SADTASYAAAVLLRFPIPDPTPY--NTVIRHLALHS-PTLATTLFSHMHRTGVTVDHFTF 91
S S+A ++L RFP D Y N++IR + LF MH T D++TF
Sbjct: 71 SVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTF 130
Query: 92 PLIXXXXXXXXXX---XXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQ 148
P + GF SN+FV NAL+ Y SL+ A +FDEM
Sbjct: 131 PFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSV 190
Query: 149 RDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALEL 208
D+ SW+++I + G P AL +F +M + D + +++V+ +SLG L
Sbjct: 191 WDVVSWNSIIESYAKLGKPKVALEMFSRMT---NEFGCRPDNITLVNVLPPCASLGTHSL 247
Query: 209 GIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAV 268
G +H + + + + +G L++MY++CG +D + VF M ++VV+W +++ G +
Sbjct: 248 GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQ 307
Query: 269 HGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYP 325
GR +A+R F M+E ++ D ++AA+ + GL + V M S G+ P
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS-GIKP 363
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 179/411 (43%), Gaps = 58/411 (14%)
Query: 12 IKTGQHNNPLSLRTFFLRCAELPSADTASY--------AAAVLLRFPIPDPTPYNTVIRH 63
++ G+ + LSL T F+ + +A A Y A V + D +N++I
Sbjct: 143 VRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIES 202
Query: 64 LA-LHSPTLATTLFSHM-HRTGVTVDHFTFPLIX---XXXXXXXXXXXXXXXXXXXGFAS 118
A L P +A +FS M + G D+ T +
Sbjct: 203 YAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ 262
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N+FV N L++ Y G ++ A +F M +D+ SW+ ++ ++ G +A+ LF++MQ
Sbjct: 263 NMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQ 322
Query: 179 LGDPQVPEST-------------------------------DGVMMLSVISAVSSLGALE 207
++ T + V ++SV+S +S+GAL
Sbjct: 323 EEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALM 382
Query: 208 LGIWVHAY-------IRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEM--PHRNVVT 258
G +H Y +R+ G G + LI+MY++C +D + +F+ + R+VVT
Sbjct: 383 HGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVT 442
Query: 259 WTSLITGLAVHGRSREALRAFRDMRE--AGLRPDGAAYTAALVACSHGGLVEDGWRVFE- 315
WT +I G + HG + +AL +M E RP+ + ALVAC+ + G ++
Sbjct: 443 WTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAY 502
Query: 316 SMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL 366
++R++ P+ C++D+ + G + +A + V D + N V W +L+
Sbjct: 503 ALRNQQNAVPLFVS-NCLIDMYAKCGSISDA-RLVFDNMMAKNEVTWTSLM 551
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 121/271 (44%), Gaps = 13/271 (4%)
Query: 126 LINAYGSSGSLNLAVHLFDEMPQRD--LASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
LI+ Y S G L+ AV L P D + W++LI + +NG + L LF M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMH----S 120
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
+ + D V A + ++ G HA G V +G AL+ MYSRC S+
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM-REAGLRPDGAAYTAALVACS 302
+ KVF+EM +VV+W S+I A G+ + AL F M E G RPD L C+
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 303 HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIW 362
G G ++ + + M C+VD+ + GM+ EA +M +K + V W
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVG-NCLVDMYAKCGMMDEANTVFSNMSVK-DVVSW 298
Query: 363 RTLLGACVN----HNDLVLAEKAKERVNELD 389
++ + + L EK +E ++D
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 338 bits (868), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 202/549 (36%), Positives = 288/549 (52%), Gaps = 28/549 (5%)
Query: 32 ELPSADTASY---------------AAAVLLRFPIPDPTPYNTVIRHLALHSP-TLATTL 75
E+P DT SY A + R P D +NT+I A A L
Sbjct: 118 EIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKAREL 177
Query: 76 F-SHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSG 134
F S M + V+ + I + A+I Y +
Sbjct: 178 FYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAP------VRGVVAWTAMITGYMKAK 231
Query: 135 SLNLAVHLFDEMP-QRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMM 193
+ LA +F +M ++L +W+ +I + N P + L LF+ M L + P S+ +
Sbjct: 232 KVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAM-LEEGIRPNSSG---L 287
Query: 194 LSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPH 253
S + S L AL+LG +H + ++ L V T+LI+MY +CG + + K+FE M
Sbjct: 288 SSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK 347
Query: 254 RNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRV 313
++VV W ++I+G A HG + +AL FR+M + +RPD + A L+AC+H GLV G
Sbjct: 348 KDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAY 407
Query: 314 FESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHN 373
FESM +Y V P +HY CMVDLLGRAG L EA K + MP +P++ ++ TLLGAC H
Sbjct: 408 FESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHK 467
Query: 374 DLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVV 433
++ LAE A E++ +L+ + YV L+N Y VR M+E+ +VK PG S +
Sbjct: 468 NVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWI 527
Query: 434 HIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHDIQEEEKEHSLGY 493
I VH F S D HP+ + I K L + +KL GY P LH+++EE+KE L +
Sbjct: 528 EIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLW 587
Query: 494 HSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSK 553
HSEKLAVAF + I+V KNLRIC DCH +K +S I ++II+RD RFHHF
Sbjct: 588 HSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKD 647
Query: 554 GSCSCGDFW 562
GSCSCGD+W
Sbjct: 648 GSCSCGDYW 656
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 337 bits (864), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 178/450 (39%), Positives = 262/450 (58%), Gaps = 6/450 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF +++ V N LI+ YG + + +F EM ++ SW +L+ + N +A L+
Sbjct: 239 GFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY 298
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+ + + E++D M+ SV+SA + + LELG +HA+ +A + T+ +G+AL++M
Sbjct: 299 LRSR---KDIVETSD-FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDM 354
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM--REAGLRPDGA 292
Y +CG I+ S + F+EMP +N+VT SLI G A G+ AL F +M R G P+
Sbjct: 355 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 414
Query: 293 AYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVED 352
+ + L ACS G VE+G ++F+SMRS YG+ P EHY C+VD+LGRAGM+ A++F++
Sbjct: 415 TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKK 474
Query: 353 MPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXX 412
MPI+P +W L AC H L A E + +LDP G++VLLSN +
Sbjct: 475 MPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEA 534
Query: 413 XXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYA 472
VR ++ I K G S + + VH F + D SH +EI L + + ++ GY
Sbjct: 535 NTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYK 594
Query: 473 PNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHV 532
P+ L+D++EEEK + +HSEKLA+AF LL IR+ KNLRIC DCHSF K V
Sbjct: 595 PDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFV 654
Query: 533 SGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
SG ++II+RD NRFH F G CSC D+W
Sbjct: 655 SGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 158/376 (42%), Gaps = 12/376 (3%)
Query: 7 LHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLAL 66
+HA ++KT P L + + D A VL P + + ++I LA
Sbjct: 28 VHARIVKTLDSPPPPFLANYLINM--YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQ 85
Query: 67 HSP-TLATTLFSHMHRTGVTVDHFTFPLIXXXXXXX---XXXXXXXXXXXXXGFASNIFV 122
+ + A F M R GV + FTFP G ++FV
Sbjct: 86 NGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFV 145
Query: 123 QNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDP 182
+ + Y + + A LFDE+P+R+L +W+ I +G P EA+ F + +
Sbjct: 146 GCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR---- 201
Query: 183 QVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSID 242
++ + + + ++A S L LG+ +H + R+G V + LI+ Y +C I
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261
Query: 243 RSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACS 302
S +F EM +N V+W SL+ + +A + R+ + ++ L AC+
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 321
Query: 303 HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIW 362
+E G R + + V + +VD+ G+ G + ++ + ++MP K N V
Sbjct: 322 GMAGLELG-RSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEK-NLVTR 379
Query: 363 RTLLGACVNHNDLVLA 378
+L+G + + +A
Sbjct: 380 NSLIGGYAHQGQVDMA 395
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 337 bits (864), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/449 (39%), Positives = 256/449 (57%), Gaps = 5/449 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G + V NA IN YG +G L + LF+++ ++L SW+T+IV NG + L+ F
Sbjct: 164 GVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYF 223
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+ +V D L+V+ + +G + L +H I G + TAL+++
Sbjct: 224 NMSR----RVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDL 279
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
YS+ G ++ S VF E+ + + WT+++ A HG R+A++ F M G+ PD +
Sbjct: 280 YSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTF 339
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
T L ACSH GLVE+G FE+M Y + P L+HY CMVDLLGR+G+L +A+ +++MP
Sbjct: 340 THLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMP 399
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
++P+S +W LLGAC + D L KA ER+ EL+P +YV+LSN Y
Sbjct: 400 MEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASR 459
Query: 415 VRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLG-GYAP 473
+RN M++ +V+ G S + +H+FV GD SHP+ E+I K L + +K GY
Sbjct: 460 IRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKS 519
Query: 474 NTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVS 533
T VLHD+ E+ KE + HSEK+A+AF LL + I + KNLRIC DCH K +S
Sbjct: 520 KTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAIS 579
Query: 534 GIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
I + IIIRD RFHHF GSCSC D+W
Sbjct: 580 LIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 124/262 (47%), Gaps = 22/262 (8%)
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLG 180
F+ + L+ Y G A LFDEMP+RDL SW++LI ++ GY + + +M +
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMI- 125
Query: 181 DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGS 240
+V + V LS+ISA G+ E G +H + + G+ V + A IN Y + G
Sbjct: 126 -SEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGD 184
Query: 241 IDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVA 300
+ S K+FE++ +N+V+W ++I +G + + L F R G PD A + A L +
Sbjct: 185 LTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRS 244
Query: 301 CSHGGLVEDGWRVFESMRSEYGVYPMLEHYG---------CMVDLLGRAGMLLEAFKFVE 351
C G+V R G++ ++ G ++DL + G L ++
Sbjct: 245 CEDMGVV----------RLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFH 294
Query: 352 DMPIKPNSVIWRTLLGACVNHN 373
++ P+S+ W +L A H
Sbjct: 295 EIT-SPDSMAWTAMLAAYATHG 315
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 336 bits (862), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 200/566 (35%), Positives = 294/566 (51%), Gaps = 25/566 (4%)
Query: 6 NLHATLIKTGQHNNPL---SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIR 62
LH + K G P +L + + +C + A + + YN +I
Sbjct: 74 QLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVC----YNALIS 129
Query: 63 HLALHSP-TLATTLFSHMHRTGVTVDHFTF----PLIXXXXXXXXXXXXXXXXXXXXGFA 117
+S T A +F M TGV+VD T PL G
Sbjct: 130 GYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKG-GLD 188
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
S + V N+ I Y GS+ LFDEMP + L +W+ +I ++ NG + L L++QM
Sbjct: 189 SEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM 248
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
+ P D ++SV+S+ + LGA ++G V + G V + A I+MY+R
Sbjct: 249 K-SSGVCP---DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYAR 304
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
CG++ ++ VF+ MP +++V+WT++I +HG L F DM + G+RPDGA +
Sbjct: 305 CGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMV 364
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
L ACSH GL + G +F +M+ EY + P EHY C+VDLLGRAG L EA +F+E MP++P
Sbjct: 365 LSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEP 424
Query: 358 NSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRN 417
+ +W LLGAC H ++ +AE A +V E +P++ G YVL+SN Y +R
Sbjct: 425 DGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRV 484
Query: 418 SMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSV-VDTIKLGGYAPNTS 476
MRE K+PG S V VH F++GD SH Q EE+ + L + ++L G
Sbjct: 485 MMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGN----- 539
Query: 477 SVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIF 536
+ + EE + HSE+LA+AF +L I VIKNLR+C DCH F+K VS I
Sbjct: 540 --MDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIV 597
Query: 537 DKDIIIRDRNRFHHFSKGSCSCGDFW 562
D+ ++RD +RFH+F G CSC D+W
Sbjct: 598 DRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 153/320 (47%), Gaps = 12/320 (3%)
Query: 55 TPYNTVIRHLALHSP-TLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX--- 110
TP+N +R LA S + + +L+ M R+G + D F+FP I
Sbjct: 19 TPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 78
Query: 111 XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLAS--WSTLIVCFTNNGYPA 168
G + FV ALI+ Y G + A +F+E PQ S ++ LI +T N
Sbjct: 79 VTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVT 138
Query: 169 EALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLG 228
+A +F++M+ + S D V ML ++ + L LG +H + GL V +
Sbjct: 139 DAAYMFRRMK----ETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVL 194
Query: 229 TALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLR 288
+ I MY +CGS++ ++F+EMP + ++TW ++I+G + +G + + L + M+ +G+
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 289 PDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFK 348
PD + L +C+H G + G V + + S G P + + + R G L +A
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESN-GFVPNVFVSNASISMYARCGNLAKARA 313
Query: 349 FVEDMPIKPNSVIWRTLLGA 368
+ MP+K + V W ++G
Sbjct: 314 VFDIMPVK-SLVSWTAMIGC 332
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 333 bits (855), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 179/546 (32%), Positives = 289/546 (52%), Gaps = 17/546 (3%)
Query: 23 LRTFFLRCAELPSADTASYAAAVLLRFPIPDPT--PYNTVIRHLALH-SPTLATTLFSHM 79
L + +C L SA T V P+P+ T + ++ A + P A +FS M
Sbjct: 160 LIALYAKCRRLGSART------VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 213
Query: 80 HRTGVTVDHFTFPLIXXXXXXXXXXXXXX---XXXXXXGFASNIFVQNALINAYGSSGSL 136
+ V D + G + +L Y G +
Sbjct: 214 RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQV 273
Query: 137 NLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSV 196
A LFD+M +L W+ +I + NGY EA+ +F +M D + D + + S
Sbjct: 274 ATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVR----PDTISITSA 329
Query: 197 ISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNV 256
ISA + +G+LE ++ Y+ R+ V + +ALI+M+++CGS++ + VF+ R+V
Sbjct: 330 ISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDV 389
Query: 257 VTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFES 316
V W+++I G +HGR+REA+ +R M G+ P+ + L+AC+H G+V +GW F
Sbjct: 390 VVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNR 449
Query: 317 MRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLV 376
M +++ + P +HY C++DLLGRAG L +A++ ++ MP++P +W LL AC H +
Sbjct: 450 M-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508
Query: 377 LAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHID 436
L E A +++ +DP + G YV LSN Y VR M+E + K+ G S V +
Sbjct: 509 LGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVR 568
Query: 437 QVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHDIQEEEKEHSLGYHSE 496
+ F GD SHP++EEI + + + +K GG+ N + LHD+ +EE E +L HSE
Sbjct: 569 GRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSE 628
Query: 497 KLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSKGSC 556
++A+A+ L+ +R+ KNLR C +CH+ K +S + D++I++RD NRFHHF G C
Sbjct: 629 RIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVC 688
Query: 557 SCGDFW 562
SCGD+W
Sbjct: 689 SCGDYW 694
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 170/334 (50%), Gaps = 14/334 (4%)
Query: 40 SYAAAVLLRFPIPDPTPYNTVIRHLALHSP-TLATTLFSHMHRTGVTVDHFTFPLIXXXX 98
++A V P P P+N +IR + ++ A ++S+M V+ D FTFP +
Sbjct: 70 TFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC 129
Query: 99 XXXXXXXXXX---XXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFD--EMPQRDLAS 153
GF +++FVQN LI Y L A +F+ +P+R + S
Sbjct: 130 SGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVS 189
Query: 154 WSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVH 213
W+ ++ + NG P EAL +F QM+ D + D V ++SV++A + L L+ G +H
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSQMRKMDVK----PDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 214 AYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSR 273
A + + GL + L +L MY++CG + + +F++M N++ W ++I+G A +G +R
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 274 EALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESM-RSEYGVYPMLEHYGC 332
EA+ F +M +RPD + T+A+ AC+ G +E ++E + RS+Y +
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SA 363
Query: 333 MVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL 366
++D+ + G +E + V D + + V+W ++
Sbjct: 364 LIDMFAKCGS-VEGARLVFDRTLDRDVVVWSAMI 396
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 52/328 (15%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G + F+ LI+A S G + A +FD++P+ + W+ +I ++ N + +AL ++
Sbjct: 48 GLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMY 107
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
MQL S D ++ A S L L++G +VHA + R G V + LI +
Sbjct: 108 SNMQLARV----SPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIAL 163
Query: 235 YSRCGSIDRSVKVFE--EMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGA 292
Y++C + + VFE +P R +V+WT++++ A +G EAL F MR+ ++PD
Sbjct: 164 YAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWV 223
Query: 293 AYTAALVACS-----------HGGLVEDGWRV------------------------FESM 317
A + L A + H +V+ G + F+ M
Sbjct: 224 ALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKM 283
Query: 318 RSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM---PIKPNSVIWRTLLGACVNHND 374
+S P L + M+ + G EA +M ++P+++ + + AC
Sbjct: 284 KS-----PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGS 338
Query: 375 LVLAEKAKERVNELDPHHDGDYVLLSNA 402
L A E V D D V +S+A
Sbjct: 339 LEQARSMYEYVGRSDYRDD---VFISSA 363
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 332 bits (850), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 187/526 (35%), Positives = 278/526 (52%), Gaps = 9/526 (1%)
Query: 42 AAAVLLRFPIPDPTPYNTVIRHL-ALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXX 100
A V P T +N +I L +LF MH G + D +T +
Sbjct: 44 ARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAG 103
Query: 101 XXXXXXXXXX---XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTL 157
G ++ V ++L + Y +G L + MP R+L +W+TL
Sbjct: 104 LRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTL 163
Query: 158 IVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIR 217
I+ NG P L L++ M++ + + + ++V+S+ S L G +HA
Sbjct: 164 IMGNAQNGCPETVLYLYKMMKISGCR----PNKITFVTVLSSCSDLAIRGQGQQIHAEAI 219
Query: 218 RAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALR 277
+ G V + ++LI+MYS+CG + + K F E + V W+S+I+ HG+ EA+
Sbjct: 220 KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIE 279
Query: 278 AFRDMRE-AGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDL 336
F M E + + A+ L ACSH GL + G +F+ M +YG P L+HY C+VDL
Sbjct: 280 LFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDL 339
Query: 337 LGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDY 396
LGRAG L +A + MPIK + VIW+TLL AC H + +A++ + + ++DP+ Y
Sbjct: 340 LGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACY 399
Query: 397 VLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIM 456
VLL+N + VR SMR+ + KE G+S VH+F GD S + +EI
Sbjct: 400 VLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIY 459
Query: 457 KFLVSVVDTIKLGGYAPNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVI 516
+L + +KL GY P+T+SVLHD+ EEEKE L HSEKLAVAF L+ + IR+I
Sbjct: 460 SYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRII 519
Query: 517 KNLRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
KNLR+C DCH K++S I +++I +RD +RFHHF G CSCGD+W
Sbjct: 520 KNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 131/279 (46%), Gaps = 16/279 (5%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N N LIN Y +G L A +FDEMP R L +W+ +I + E LSLF++M
Sbjct: 24 NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 83
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+ S D + SV S + L ++ +G +H Y + GL L + + ++L +MY R
Sbjct: 84 ----GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRN 139
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G + V MP RN+V W +LI G A +G L ++ M+ +G RP+ + L
Sbjct: 140 GKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVL 199
Query: 299 VACSHGGLVEDGWRVF-ESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
+CS + G ++ E+++ G ++ ++ + + G L +A K +
Sbjct: 200 SSCSDLAIRGQGQQIHAEAIK--IGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE-DE 256
Query: 358 NSVIWRTLLGACVNHND--------LVLAEKAKERVNEL 388
+ V+W +++ A H +AE+ +NE+
Sbjct: 257 DEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEV 295
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 77/172 (44%), Gaps = 10/172 (5%)
Query: 197 ISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNV 256
+S S LG + V+ +R+ + LIN Y R G + + KVF+EMP R +
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSS----NILINGYVRAGDLVNARKVFDEMPDRKL 56
Query: 257 VTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGL--VEDGWRVF 314
TW ++I GL + E L FR+M G PD YT V GL V G ++
Sbjct: 57 TTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD--EYTLGSVFSGSAGLRSVSIGQQI- 113
Query: 315 ESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL 366
+YG+ L + + R G L + + MP++ N V W TL+
Sbjct: 114 HGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVR-NLVAWNTLI 164
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 330 bits (847), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/446 (38%), Positives = 262/446 (58%), Gaps = 7/446 (1%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
++FV ++++ Y G L LFD M + L SW+T+I + NG+P AL +F+QM
Sbjct: 530 DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
L Q+ G+ M+ V A S L +L LG HAY + L + +LI+MY++
Sbjct: 590 LYGIQLC----GISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKN 645
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
GSI +S KVF + ++ +W ++I G +HG ++EA++ F +M+ G PD + L
Sbjct: 646 GSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVL 705
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFV-EDMPIKP 357
AC+H GL+ +G R + M+S +G+ P L+HY C++D+LGRAG L +A + V E+M +
Sbjct: 706 TACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEA 765
Query: 358 NSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRN 417
+ IW++LL +C H +L + EK ++ EL+P +YVLLSN Y VR
Sbjct: 766 DVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQ 825
Query: 418 SMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVD-TIKLGGYAPNTS 476
M E + K+ G S + +++ V FV G+ +EEI K L S+++ I GY P+T
Sbjct: 826 RMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEI-KSLWSILEMKISKMGYRPDTM 884
Query: 477 SVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIF 536
SV HD+ EEEK L HSEKLA+ + L+ + IRV KNLRIC DCH+ K +S +
Sbjct: 885 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 944
Query: 537 DKDIIIRDRNRFHHFSKGSCSCGDFW 562
+++I++RD RFHHF G CSCGD+W
Sbjct: 945 EREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 17/241 (7%)
Query: 74 TLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX---XXXXGFASNIFVQNALINAY 130
T + T + DHFT+P + G ++FV NAL++ Y
Sbjct: 173 TFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY 232
Query: 131 GSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDG 190
G+ G + A+ LFD MP+R+L SW+++I F++NG+ E+ L +M + E+ DG
Sbjct: 233 GTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEM------MEENGDG 286
Query: 191 VMMLSVISAVSSLGA------LELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRS 244
M V + V+ L + LG VH + + L + L AL++MYS+CG I +
Sbjct: 287 AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA 346
Query: 245 VKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAG--LRPDGAAYTAALVACS 302
+F+ ++NVV+W +++ G + G + R M G ++ D A+ C
Sbjct: 347 QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 406
Query: 303 H 303
H
Sbjct: 407 H 407
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 4/187 (2%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
F N V NA + +Y GSL+ A +F + + + SW+ LI + P +L
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 485
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMY 235
QM++ +P D + S++SA S L +L LG VH +I R L + + +++++Y
Sbjct: 486 QMKIS-GLLP---DSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLY 541
Query: 236 SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
CG + +F+ M +++V+W ++ITG +G AL FR M G++ G +
Sbjct: 542 IHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMM 601
Query: 296 AALVACS 302
ACS
Sbjct: 602 PVFGACS 608
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 19/252 (7%)
Query: 126 LINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVP 185
+I Y GS + + +FD + ++L W+ +I ++ N E L F +M +P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 186 ESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSV 245
D VI A + + + +G+ VH + + GL V +G AL++ Y G + ++
Sbjct: 186 ---DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDAL 242
Query: 246 KVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE----AGLRPDGAAYTAALVAC 301
++F+ MP RN+V+W S+I + +G S E+ +M E PD A L C
Sbjct: 243 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302
Query: 302 SHG-----GLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIK 356
+ G GW V + E L ++D+ + G + A + + M
Sbjct: 303 AREREIGLGKGVHGWAVKLRLDKE------LVLNNALMDMYSKCGCITNA-QMIFKMNNN 355
Query: 357 PNSVIWRTLLGA 368
N V W T++G
Sbjct: 356 KNVVSWNTMVGG 367
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 2/183 (1%)
Query: 120 IFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
+ + NAL++ Y G + A +F +++ SW+T++ F+ G + +QM
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
G V D V +L+ + L +H Y + + A + Y++CG
Sbjct: 387 GGEDVK--ADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCG 444
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
S+ + +VF + + V +W +LI G A R +L A M+ +GL PD + L
Sbjct: 445 SLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLS 504
Query: 300 ACS 302
ACS
Sbjct: 505 ACS 507
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Query: 227 LGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM-REA 285
L T +I MY+ CGS D S VF+ + +N+ W ++I+ + + E L F +M
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT 181
Query: 286 GLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLE 345
L PD Y + AC+ V G V + + G+ + +V G G + +
Sbjct: 182 DLLPDHFTYPCVIKACAGMSDVGIGLAV-HGLVVKTGLVEDVFVGNALVSFYGTHGFVTD 240
Query: 346 AFKFVEDMPIKPNSVIWRTLL 366
A + + MP + N V W +++
Sbjct: 241 ALQLFDIMP-ERNLVSWNSMI 260
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 328 bits (841), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 264/448 (58%), Gaps = 4/448 (0%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G S+ + ++L++ YG G ++ A ++FD++ ++D+ SW+++I + + E SLF
Sbjct: 248 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLF 307
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
++ +G + P + V++A + L ELG VH Y+ R G ++L++M
Sbjct: 308 SEL-VGSCERP---NEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDM 363
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y++CG+I+ + V + P ++V+WTSLI G A +G+ EAL+ F + ++G +PD +
Sbjct: 364 YTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTF 423
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
L AC+H GLVE G F S+ ++ + +HY C+VDLL R+G + + +MP
Sbjct: 424 VNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMP 483
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
+KP+ +W ++LG C + ++ LAE+A + + +++P + YV ++N Y
Sbjct: 484 MKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGK 543
Query: 415 VRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPN 474
+R M+E + K PG S I + H F++ D SHP + +I++FL + +K GY P
Sbjct: 544 MRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPA 603
Query: 475 TSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSG 534
TS VLHD+++E+KE +L YHSEKLAVAF +L + AI+V KNLR C DCH +K +S
Sbjct: 604 TSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISN 663
Query: 535 IFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
I + I +RD RFH F G CSCGD+W
Sbjct: 664 ITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 125/250 (50%), Gaps = 7/250 (2%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N ++N Y G L A LFDEM ++D SW+ ++ + P EAL L+ MQ +
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQ----R 210
Query: 184 VPESTDGVMMLSVISAVSSL-GALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSID 242
VP S + +S+ A ++ + G +H +I RAGL L ++L++MY +CG ID
Sbjct: 211 VPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCID 270
Query: 243 RSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACS 302
+ +F+++ ++VV+WTS+I R RE F ++ + RP+ + L AC+
Sbjct: 271 EARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACA 330
Query: 303 HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIW 362
E G +V M + G P +VD+ + G + A V+ P KP+ V W
Sbjct: 331 DLTTEELGKQVHGYM-TRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSW 388
Query: 363 RTLLGACVNH 372
+L+G C +
Sbjct: 389 TSLIGGCAQN 398
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 7/122 (5%)
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
LG + P ++ ++I S ALE G VH +IR +G + + L+ MY++C
Sbjct: 77 LGRAKKPPAS---TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKC 133
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
GS+ + KVF+EMP+R++ +W ++ G A G EA + F +M E D ++TA +
Sbjct: 134 GSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE----KDSYSWTAMV 189
Query: 299 VA 300
Sbjct: 190 TG 191
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 327 bits (838), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/449 (38%), Positives = 255/449 (56%), Gaps = 5/449 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G ++ V NALI+ Y G + ++ +F M D +W+T+I G A L +
Sbjct: 438 GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVT 497
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
QM+ + VP D L + +SL A LG +H + R G + +G ALI M
Sbjct: 498 TQMRKSEV-VP---DMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEM 553
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
YS+CG ++ S +VFE M R+VVTWT +I ++G +AL F DM ++G+ PD +
Sbjct: 554 YSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVF 613
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
A + ACSH GLV++G FE M++ Y + PM+EHY C+VDLL R+ + +A +F++ MP
Sbjct: 614 IAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMP 673
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
IKP++ IW ++L AC D+ AE+ R+ EL+P G +L SNAY
Sbjct: 674 IKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSL 733
Query: 415 VRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPN 474
+R S+++ I K PG S + + + VH F SGD+S PQ E I K L + + GY P+
Sbjct: 734 IRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPD 793
Query: 475 TSSVLHDI-QEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVS 533
V ++ +EEEK + HSE+LA+AF LL ++V+KNLR+C DCH K +S
Sbjct: 794 PREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLIS 853
Query: 534 GIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
I ++I++RD NRFH F G+CSC D W
Sbjct: 854 KIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 135/299 (45%), Gaps = 46/299 (15%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF V+N LI+ Y G + A +F+ M +D SW+++I + +G EA+ LF
Sbjct: 337 GFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLF 396
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+ M + + E D + L +IS + L L+ G +H+ ++G+ + + + ALI+M
Sbjct: 397 KMMMI----MEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDM 452
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y++CG + S+K+F M + VTW ++I+ G L+ MR++ + PD A +
Sbjct: 453 YAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATF 512
Query: 295 TAALVAC-----------------------------------SHGGLVEDGWRVFESM-- 317
L C S G +E+ RVFE M
Sbjct: 513 LVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSR 572
Query: 318 RSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLV 376
R M+ YG + G LE F +E I P+SV++ ++ AC +H+ LV
Sbjct: 573 RDVVTWTGMIYAYG----MYGEGEKALETFADMEKSGIVPDSVVFIAIIYAC-SHSGLV 626
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 157/336 (46%), Gaps = 13/336 (3%)
Query: 50 PIPDPTPYNTVIRHLALHS--PTLATTLFSHMHRTGVTVDHFTFPLIXXXXX---XXXXX 104
P + +N++IR + + P A + + + V+ D +TFP +
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPE-ALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 105 XXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNN 164
GF S++FV NAL++ Y G L A +FDEMP RDL SW++LI ++++
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 165 GYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLT 224
GY EAL ++ +++ VP D + SV+ A +L ++ G +H + ++G+
Sbjct: 186 GYYEEALEIYHELK-NSWIVP---DSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSV 241
Query: 225 VPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE 284
V + L+ MY + + +VF+EM R+ V++ ++I G E++R F + +
Sbjct: 242 VVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD 301
Query: 285 AGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLL 344
+PD ++ L AC H + ++ M + G ++D+ + G ++
Sbjct: 302 Q-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYML-KAGFVLESTVRNILIDVYAKCGDMI 359
Query: 345 EAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEK 380
A M K ++V W +++ + DL+ A K
Sbjct: 360 TARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMK 394
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 5/197 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEM-PQRDLASWSTLIVCFTNNGYPAEALSL 173
G S+ F LI+ Y ++ +F + P +++ W+++I F+ NG EAL
Sbjct: 34 GLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEF 93
Query: 174 FQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALIN 233
+ +++ + S D SVI A + L E+G V+ I G + +G AL++
Sbjct: 94 YGKLR----ESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVD 149
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
MYSR G + R+ +VF+EMP R++V+W SLI+G + HG EAL + +++ + + PD
Sbjct: 150 MYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFT 209
Query: 294 YTAALVACSHGGLVEDG 310
++ L A + +V+ G
Sbjct: 210 VSSVLPAFGNLLVVKQG 226
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 119/254 (46%), Gaps = 9/254 (3%)
Query: 139 AVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVIS 198
A +FDEM RD S++T+I + E++ +F ++ D P D + + SV+
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKP---DLLTVSSVLR 315
Query: 199 AVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVT 258
A L L L +++ Y+ +AG L + LI++Y++CG + + VF M ++ V+
Sbjct: 316 ACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS 375
Query: 259 WTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMR 318
W S+I+G G EA++ F+ M + D Y + + ++ G + S
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG-KGLHSNG 434
Query: 319 SEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLV-- 376
+ G+ L ++D+ + G + ++ K M ++V W T++ ACV D
Sbjct: 435 IKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVISACVRFGDFATG 493
Query: 377 LAEKAKERVNELDP 390
L + R +E+ P
Sbjct: 494 LQVTTQMRKSEVVP 507
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 6/178 (3%)
Query: 212 VHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEM-PHRNVVTWTSLITGLAVHG 270
+HA + GL + LI+ YS S+ VF + P +NV W S+I + +G
Sbjct: 26 IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG 85
Query: 271 RSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHY 330
EAL + +RE+ + PD + + + AC+ E G V+E + + G L
Sbjct: 86 LFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL-DMGFESDLFVG 144
Query: 331 GCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNEL 388
+VD+ R G+L A + ++MP++ + V W +L+ +H E+A E +EL
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYSSHG---YYEEALEIYHEL 198
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 326 bits (835), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 166/446 (37%), Positives = 253/446 (56%), Gaps = 5/446 (1%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N A+++ Y SG A+ LF +P ++L SW+ LI F +G EA S+F +M+
Sbjct: 170 NTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMR 229
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+ + D +++ S++ A ++L A G VH + G V + ALI+MY++C
Sbjct: 230 ---RERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKC 286
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
+ + +F M HR+VV+WTSLI G+A HG++ +AL + DM G++P+ + +
Sbjct: 287 SDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLI 346
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
ACSH G VE G +F+SM +YG+ P L+HY C++DLLGR+G+L EA + MP P+
Sbjct: 347 YACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPD 406
Query: 359 SVIWRTLLGACVNHNDLVLAEK-AKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRN 417
W LL AC + + A V+ Y+LLSN Y R
Sbjct: 407 EPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARR 466
Query: 418 SMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKL-GGYAPNTS 476
+ E + K+PG S V + + F +G+ SHP E+I + L + + +++ GY P+TS
Sbjct: 467 KLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTS 526
Query: 477 SVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIF 536
+LHD+ E+EKE L +HSE+ AVA+ LL IR++KNLR+C DCH +KH+S I
Sbjct: 527 WILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEIT 586
Query: 537 DKDIIIRDRNRFHHFSKGSCSCGDFW 562
+++II+RD R+HHF G CSC DFW
Sbjct: 587 EREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 103/197 (52%), Gaps = 7/197 (3%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N L+N YG G+ + A+ +FDEMP RD +W++++ + LS+F +
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
P D + +++ A ++LG+++ G VH + + + ++L++MY++CG ++
Sbjct: 102 RP---DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNS 158
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSH 303
+ VF+ + +N ++WT++++G A GR EAL FR + L ++TA +
Sbjct: 159 AKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLY----SWTALISGFVQ 214
Query: 304 GGLVEDGWRVFESMRSE 320
G + + VF MR E
Sbjct: 215 SGKGLEAFSVFTEMRRE 231
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 87/157 (55%), Gaps = 5/157 (3%)
Query: 212 VHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGR 271
+HA+I + G+ PL L+N+Y +CG+ +++VF+EMPHR+ + W S++T L
Sbjct: 25 LHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANL 84
Query: 272 SREAL-RAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVF-ESMRSEYGVYPMLEH 329
S + L +GLRPD ++A + AC++ G ++ G +V + SEY +++
Sbjct: 85 SGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVK- 143
Query: 330 YGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL 366
+VD+ + G+L A + + +K N++ W ++
Sbjct: 144 -SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMV 178
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 6/165 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF S +F+ NALI+ Y + A +F M RD+ SW++LIV +G +AL+L+
Sbjct: 268 GFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALY 327
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWV-HAYIRRAGLGLTVPLGTALIN 233
M + E V + +I A S +G +E G + + + G+ ++ T L++
Sbjct: 328 DDMVSHGVKPNE----VTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLD 383
Query: 234 MYSRCGSIDRSVKVFEEMPH-RNVVTWTSLITGLAVHGRSREALR 277
+ R G +D + + MP + TW +L++ GR + +R
Sbjct: 384 LLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIR 428
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 325 bits (832), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 170/492 (34%), Positives = 266/492 (54%), Gaps = 5/492 (1%)
Query: 72 ATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYG 131
A LFS M R GV + FT+ +I + + V AL++AY
Sbjct: 381 AVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKT-NYERSSTVGTALLDAYV 439
Query: 132 SSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGV 191
G + A +F + +D+ +WS ++ + G A+ +F ++ G + E T
Sbjct: 440 KLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSS 499
Query: 192 MMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEM 251
++ + +S+G G H + ++ L ++ + +AL+ MY++ G+I+ + +VF+
Sbjct: 500 ILNVCAATNASMGQ---GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 252 PHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGW 311
+++V+W S+I+G A HG++ +AL F++M++ ++ DG + AC+H GLVE+G
Sbjct: 557 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGE 616
Query: 312 RVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVN 371
+ F+ M + + P EH CMVDL RAG L +A K +E+MP S IWRT+L AC
Sbjct: 617 KYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRV 676
Query: 372 HNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLS 431
H L A E++ + P YVLLSN Y VR M E + KEPG S
Sbjct: 677 HKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYS 736
Query: 432 VVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHDIQEEEKEHSL 491
+ + + F++GD SHP ++I L + +K GY P+TS VL DI +E KE L
Sbjct: 737 WIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVL 796
Query: 492 GYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHF 551
HSE+LA+AF L+ + +IKNLR+C DCH +K ++ I +++I++RD NRFHHF
Sbjct: 797 AQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHF 856
Query: 552 SK-GSCSCGDFW 562
S G CSCGDFW
Sbjct: 857 SSDGVCSCGDFW 868
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 144/314 (45%), Gaps = 26/314 (8%)
Query: 72 ATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXX---XXXXXGFASNIFVQNALIN 128
A LF ++HR G+ +D F + GF ++ V +L++
Sbjct: 77 AKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVD 136
Query: 129 AYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPEST 188
Y + +FDEM +R++ +W+TLI + N E L+LF +MQ Q P S
Sbjct: 137 TYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ-PNSF 195
Query: 189 DGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVF 248
L V++ G G+ VH + + GL T+P+ +LIN+Y +CG++ ++ +F
Sbjct: 196 TFAAALGVLAEEGVGGR---GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILF 252
Query: 249 EEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVE 308
++ ++VVTW S+I+G A +G EAL F MR +R +++ + + C++
Sbjct: 253 DKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN----- 307
Query: 309 DGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGM---------LLEAFKFVEDMPIKPNS 359
+ +R ++ + YG + D R + +L+A + +++ N
Sbjct: 308 -----LKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNV 362
Query: 360 VIWRTLLGACVNHN 373
V W ++ + ++
Sbjct: 363 VSWTAMISGFLQND 376
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 8/231 (3%)
Query: 74 TLFSHMHRTGVTVDHFTFPL---IXXXXXXXXXXXXXXXXXXXXGFASNIFVQNALINAY 130
TLF M G + FTF + G I V N+LIN Y
Sbjct: 180 TLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY 239
Query: 131 GSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDG 190
G++ A LFD+ + + +W+++I + NG EAL +F M+L ++ ES+
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESS-- 297
Query: 191 VMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEE 250
SVI ++L L +H + + G + TAL+ YS+C ++ ++++F+E
Sbjct: 298 --FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKE 355
Query: 251 MPH-RNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVA 300
+ NVV+WT++I+G + EA+ F +M+ G+RP+ Y+ L A
Sbjct: 356 IGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/447 (37%), Positives = 249/447 (55%), Gaps = 5/447 (1%)
Query: 117 ASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQ 176
A ++ NAL++ Y SSG + A +F EM ++++ SW +I NG+ E L LF
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407
Query: 177 MQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYS 236
M+ + E D I + + LGA G HA + + G ++ G ALI MY+
Sbjct: 408 MK---REGFEPCD-YAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYA 463
Query: 237 RCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTA 296
+CG ++ + +VF MP + V+W +LI L HG EA+ + +M + G+RPD
Sbjct: 464 KCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLT 523
Query: 297 ALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIK 356
L ACSH GLV+ G + F+SM + Y + P +HY ++DLL R+G +A +E +P K
Sbjct: 524 VLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFK 583
Query: 357 PNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVR 416
P + IW LL C H ++ L A +++ L P HDG Y+LLSN + VR
Sbjct: 584 PTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVR 643
Query: 417 NSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTS 476
MR+ + KE S + ++ VH F+ D SHP+ E + +L + ++ GY P+TS
Sbjct: 644 KLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTS 703
Query: 477 SVLHDIQEE-EKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGI 535
VLHD++ + KE L HSEK+AVAF L+ IR+ KNLR C DCH+F + +S +
Sbjct: 704 FVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWV 763
Query: 536 FDKDIIIRDRNRFHHFSKGSCSCGDFW 562
+DII+RDR RFHHF G CSCG+FW
Sbjct: 764 VQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 161/407 (39%), Gaps = 81/407 (19%)
Query: 40 SYAAAVLLRFPI--PDPTPYNTVIRHLALHSPTL-ATTLFSHMHRTGVTVDHFTFPLIXX 96
+ A V + P+ D YN +I + ++ A LF M G D+FTF +
Sbjct: 97 TLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLA 156
Query: 97 XXXXXXXXXXXXXXXXXXGFASN----IFVQNALINAYGSSGS----LNLAVHLFDEMPQ 148
S V NAL++ Y S L+ A +FDE+ +
Sbjct: 157 GLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILE 216
Query: 149 RDLASWSTLIVCFTNNGY--------------------------------PAEALSLFQQ 176
+D SW+T++ + NGY EAL + ++
Sbjct: 217 KDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRR 276
Query: 177 MQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYS 236
M ++ E T SVI A ++ G L+LG VHAY+ R + +L+++Y
Sbjct: 277 MVSSGIELDEFT----YPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYY 331
Query: 237 RCGSIDRSVKVFEEMPHRNVVTWTSL-------------------------------ITG 265
+CG D + +FE+MP +++V+W +L I+G
Sbjct: 332 KCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISG 391
Query: 266 LAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYP 325
LA +G E L+ F M+ G P A++ A+ +C+ G +G + + + + G
Sbjct: 392 LAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ-YHAQLLKIGFDS 450
Query: 326 MLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNH 372
L ++ + + G++ EA + MP +SV W L+ A H
Sbjct: 451 SLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQH 496
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 128/291 (43%), Gaps = 52/291 (17%)
Query: 123 QNALINAYGSSGSLNLAVHLFDEMP--QRDLASWSTLIVCFTNNGYPAEALSLFQQMQLG 180
+ +++ Y +SG + LA +F++ P RD ++ +I F++N A++LF +M+
Sbjct: 83 RTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMK-- 140
Query: 181 DPQVPESTDGVMMLSVISAVSSLGALELG-IWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
D SV++ ++ + E + HA ++G G + AL+++YS+C
Sbjct: 141 --HEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 240 S----IDRSVKVFEEMPHRNVVTWTSLITGLAVHGR------------------------ 271
S + + KVF+E+ ++ +WT+++TG +G
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 272 --------SREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRV--FESMRSEY 321
+EAL R M +G+ D Y + + AC+ GL++ G +V + R ++
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF 318
Query: 322 GVYPMLEHY-GCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVN 371
H+ +V L + G EA E MP K + V W LL V+
Sbjct: 319 SF-----HFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVS 363
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF S++ NALI Y G + A +F MP D SW+ LI +G+ AEA+ ++
Sbjct: 447 GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVY 506
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLG----TA 230
++M L P D + +L+V++A S G ++ G Y +P G
Sbjct: 507 EEM-LKKGIRP---DRITLLTVLTACSHAGLVDQG---RKYFDSMETVYRIPPGADHYAR 559
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRNVV-TWTSLITGLAVHG 270
LI++ R G + V E +P + W +L++G VHG
Sbjct: 560 LIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG 600
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 322 bits (824), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 187/564 (33%), Positives = 284/564 (50%), Gaps = 18/564 (3%)
Query: 7 LHATLIKTGQHNNPL---SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRH 63
LH ++ +G N + +L + + + E+ S + VLL+ P D +N +I
Sbjct: 384 LHGLVVVSGLFYNQIIGNALVSMYGKIGEM------SESRRVLLQMPRRDVVAWNALIGG 437
Query: 64 LAL-HSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXX----XXXXXXXXXXXXXXGFAS 118
A P A F M GV+ ++ T + GF S
Sbjct: 438 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 497
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
+ V+N+LI Y G L+ + LF+ + R++ +W+ ++ ++G+ E L L +M+
Sbjct: 498 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 557
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
S D +SA + L LE G +H + G + A +MYS+C
Sbjct: 558 ----SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKC 613
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G I VK+ +R++ +W LI+ L HG E F +M E G++P + + L
Sbjct: 614 GEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLL 673
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
ACSHGGLV+ G ++ + ++G+ P +EH C++DLLGR+G L EA F+ MP+KPN
Sbjct: 674 TACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPN 733
Query: 359 SVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNS 418
++WR+LL +C H +L KA E +++L+P D YVL SN + VR
Sbjct: 734 DLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQ 793
Query: 419 MRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSV 478
M I K+ S V + V F GD +HPQ EI L + IK GY +TS
Sbjct: 794 MGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQA 853
Query: 479 LHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDK 538
L D EE+KEH+L HSE+LA+A+ L+ + +R+ KNLRIC DCHS K VS + +
Sbjct: 854 LQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGR 913
Query: 539 DIIIRDRNRFHHFSKGSCSCGDFW 562
I++RD+ RFHHF +G CSC D+W
Sbjct: 914 RIVLRDQYRFHHFERGLCSCKDYW 937
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 129/263 (49%), Gaps = 12/263 (4%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G S + V+N+LI+ GS G+++ A ++FD+M +RD SW+++ + NG+ E+ +F
Sbjct: 190 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 249
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIW---VHAYIRRAGLGLTVPLGTAL 231
M+ +V +T V + +S LG ++ W +H + + G V + L
Sbjct: 250 SLMRRFHDEVNSTT-------VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTL 302
Query: 232 INMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDG 291
+ MY+ G + VF++MP +++++W SL+ GRS +AL M +G +
Sbjct: 303 LRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNY 362
Query: 292 AAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVE 351
+T+AL AC E G R+ + G++ +V + G+ G + E+ + +
Sbjct: 363 VTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLL 421
Query: 352 DMPIKPNSVIWRTLLGACVNHND 374
MP + + V W L+G D
Sbjct: 422 QMP-RRDVVAWNALIGGYAEDED 443
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 5/197 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF S + V N L+ Y +G A +F +MP +DL SW++L+ F N+G +AL L
Sbjct: 291 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL 350
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M +S + V S ++A + E G +H + +GL +G AL++M
Sbjct: 351 CSM----ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSM 406
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y + G + S +V +MP R+VV W +LI G A +AL AF+ MR G+ +
Sbjct: 407 YGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITV 466
Query: 295 TAALVAC-SHGGLVEDG 310
+ L AC G L+E G
Sbjct: 467 VSVLSACLLPGDLLERG 483
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 127/243 (52%), Gaps = 13/243 (5%)
Query: 130 YGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTD 189
Y G + A HLFD MP R+ SW+T++ G E + F++M D + S+
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM--CDLGIKPSS- 58
Query: 190 GVMMLSVISAVSSLGAL-ELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVF 248
++ S+++A G++ G+ VH ++ ++GL V + TA++++Y G + S KVF
Sbjct: 59 -FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 249 EEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVE 308
EEMP RNVV+WTSL+ G + G E + ++ MR G+ + + + + +C GL++
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLK 174
Query: 309 D---GWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTL 365
D G ++ + + G+ L ++ +LG G + A ++ D + +++ W ++
Sbjct: 175 DESLGRQIIGQV-VKSGLESKLAVENSLISMLGSMGNVDYA-NYIFDQMSERDTISWNSI 232
Query: 366 LGA 368
A
Sbjct: 233 AAA 235
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 127/258 (49%), Gaps = 8/258 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G S+++V A+++ YG G ++ + +F+EMP R++ SW++L+V +++ G P E + ++
Sbjct: 89 GLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY 148
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+ M+ E++ M VIS+ L LG + + ++GL + + +LI+M
Sbjct: 149 KGMRGEGVGCNENS----MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISM 204
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
G++D + +F++M R+ ++W S+ A +G E+ R F MR +
Sbjct: 205 LGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTV 264
Query: 295 TAALVACSHGGLVEDGW-RVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+ L H + W R + + G ++ ++ + AG +EA + M
Sbjct: 265 STLLSVLGH--VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM 322
Query: 354 PIKPNSVIWRTLLGACVN 371
P K + + W +L+ + VN
Sbjct: 323 PTK-DLISWNSLMASFVN 339
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
MY++ G + + +F+ MP RN V+W ++++G+ G E + FR M + G++P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 294 YTAALVACSH-GGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVED 352
+ + AC G + +G +V ++ G+ + ++ L G G++ + K E+
Sbjct: 61 IASLVTACGRSGSMFREGVQV-HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 353 MPIKPNSVIWRTLL 366
MP + N V W +L+
Sbjct: 120 MPDR-NVVSWTSLM 132
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 318 bits (814), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 164/445 (36%), Positives = 255/445 (57%), Gaps = 11/445 (2%)
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
V N L+ Y SG + A +FD M +R++ +W++LI + E +LF++MQ
Sbjct: 273 VYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ--- 329
Query: 182 PQVPESTDG---VMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
E G + +++ A S + AL G +HA I ++ VPL +L++MY +C
Sbjct: 330 ----EEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKC 385
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G ++ S +VF+ M +++ +W ++ A++G E + F M E+G+ PDG + A L
Sbjct: 386 GEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALL 445
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
CS GL E G +FE M++E+ V P LEHY C+VD+LGRAG + EA K +E MP KP+
Sbjct: 446 SGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPS 505
Query: 359 SVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNS 418
+ IW +LL +C H ++ + E A + + L+PH+ G+YV++SN Y +R
Sbjct: 506 ASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREM 565
Query: 419 MRENRIVKEPGLSVVHIDQVVHEFVSGDN-SHPQWEEIMKFLVSVVDTIKLGGYAPNTSS 477
M++ + KE G S V + + FV+G +E K + + I+ GY+PNTS
Sbjct: 566 MKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSV 625
Query: 478 VLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFD 537
VLHD+ EE K + + HSE+LA + L++ + IR+ KNLR+C DCHS+MK VS +
Sbjct: 626 VLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTR 685
Query: 538 KDIIIRDRNRFHHFSKGSCSCGDFW 562
+ I++RD RFHHF G CSC D+W
Sbjct: 686 RVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 116/259 (44%), Gaps = 20/259 (7%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLAS---WSTLIVCFTNNGYPAEALSLFQQMQLG 180
+ LI + L+LA +FD++ L + W+ + + ++ NG P +AL ++ M
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 181 --DPQVPESTDGVMMLSV-ISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
+P G +SV + A L L +G +HA I + + + L+ +Y
Sbjct: 231 FIEP-------GNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYME 283
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
G D + KVF+ M RNVVTW SLI+ L+ R E FR M+E + A T
Sbjct: 284 SGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTI 343
Query: 298 LVACSHGGLVEDGWRVFESM--RSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPI 355
L ACS + G + + E P+L ++D+ G+ G +E + V D+ +
Sbjct: 344 LPACSRVAALLTGKEIHAQILKSKEKPDVPLLNS---LMDMYGKCGE-VEYSRRVFDVML 399
Query: 356 KPNSVIWRTLLGA-CVNHN 373
+ W +L +N N
Sbjct: 400 TKDLASWNIMLNCYAINGN 418
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 168/448 (37%), Positives = 252/448 (56%), Gaps = 4/448 (0%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF + + ALIN YG G + A +FD+ +++ +T++ + + EAL+LF
Sbjct: 267 GFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLF 326
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+M + E T +++ ++++ L L+ G +H + ++G V +G AL+NM
Sbjct: 327 SKMDTKEVPPNEYTFAILL----NSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNM 382
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y++ GSI+ + K F M R++VTW ++I+G + HG REAL AF M G P+ +
Sbjct: 383 YAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITF 442
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
L ACSH G VE G F + ++ V P ++HY C+V LL +AGM +A F+ P
Sbjct: 443 IGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAP 502
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
I+ + V WRTLL AC + L +K E E P+ G YVLLSN +
Sbjct: 503 IEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAK 562
Query: 415 VRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPN 474
VR+ M + KEPG+S + I H F++ DN HP+ I + V+ IK GY+P+
Sbjct: 563 VRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPD 622
Query: 475 TSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSG 534
+ HD+ EE++E +L YHSEKLAVA+ L+ ++ + V KN+RIC DCHS +K +S
Sbjct: 623 VAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISK 682
Query: 535 IFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
I + I+IRD NRFHHF G CSC D+W
Sbjct: 683 ISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 4/236 (1%)
Query: 117 ASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQ 176
A + + N+LIN Y A LFD MP+R++ SW ++ + N+G+ E L LF+
Sbjct: 66 AEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKS 125
Query: 177 MQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYS 236
M P + + V + S+ G +E G H + GL + L+ MYS
Sbjct: 126 MFFSGESRP---NEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYS 182
Query: 237 RCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTA 296
C +++V +++P+ ++ ++S ++G G +E L R + Y +
Sbjct: 183 LCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLS 242
Query: 297 ALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVED 352
+L S+ + +V M +G +E G ++++ G+ G +L A + +D
Sbjct: 243 SLRLFSNLRDLNLALQVHSRM-VRFGFNAEVEACGALINMYGKCGKVLYAQRVFDD 297
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 120/259 (46%), Gaps = 8/259 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G S+ FV+N L+ Y A+ + D++P DL+ +S+ + + G E L +
Sbjct: 166 GLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVL 225
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
++ D + + LS + S+L L L + VH+ + R G V ALINM
Sbjct: 226 RKTANEDF----VWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINM 281
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y +CG + + +VF++ +N+ T+++ EAL F M + P+ +
Sbjct: 282 YGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTF 341
Query: 295 TAALVACSHGGLVEDGWRVFE-SMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
L + + L++ G + ++S Y + M+ + +V++ ++G + +A K M
Sbjct: 342 AILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGN--ALVNMYAKSGSIEDARKAFSGM 399
Query: 354 PIKPNSVIWRTLLGACVNH 372
+ + V W T++ C +H
Sbjct: 400 TFR-DIVTWNTMISGCSHH 417
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 229 TALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAG-L 287
+LIN+Y +C R+ K+F+ MP RNVV+W +++ G G E L+ F+ M +G
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 288 RPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAF 347
RP+ T +CS+ G +E+G + F +YG+ +V + EA
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEG-KQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAI 191
Query: 348 KFVEDMPIKPNSVIWRTLLG 367
+ ++D+P SV L G
Sbjct: 192 RVLDDLPYCDLSVFSSALSG 211
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 311 bits (796), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 170/449 (37%), Positives = 255/449 (56%), Gaps = 7/449 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF +V +LI Y + + + +FDE +A W+ L+ ++ N +ALS+F
Sbjct: 255 GFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIF 314
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M L + +P + S +++ S+LG L+ G +H + GL +G +L+ M
Sbjct: 315 SGM-LRNSILPNQS---TFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVM 370
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
YS G+++ +V VF ++ +++V+W S+I G A HGR + A F M PD +
Sbjct: 371 YSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITF 430
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYG-VYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
T L ACSH G +E G ++F M S + ++HY CMVD+LGR G L EA + +E M
Sbjct: 431 TGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERM 490
Query: 354 PIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXX 413
+KPN ++W LL AC H+D+ EKA + LD YVLLSN Y
Sbjct: 491 VVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVS 550
Query: 414 XVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAP 473
+R M++N I+K+PG S V I HEF SGD P I + L + + +K GYAP
Sbjct: 551 KLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHCSRIYEKLEFLREKLKELGYAP 608
Query: 474 NTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVS 533
+ S LHD+++E+KE L YHSE+LA+AF L+ + A+ V+KNLR+C DCH+ +K +S
Sbjct: 609 DYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLIS 668
Query: 534 GIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
G+ ++I++RD RFHHF G+CSCGD+W
Sbjct: 669 GVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 4/187 (2%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N++++ Y G ++ A+ LF +MP +++ SW+T+I N EAL LF+ M +
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNM----LR 218
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
+ VI+A ++ A +GI VH I + G + +LI Y+ C I
Sbjct: 219 CCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGD 278
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSH 303
S KVF+E H V WT+L++G +++ + +AL F M + P+ + + + L +CS
Sbjct: 279 SRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSA 338
Query: 304 GGLVEDG 310
G ++ G
Sbjct: 339 LGTLDWG 345
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 115/260 (44%), Gaps = 55/260 (21%)
Query: 116 FASNIFVQN--ALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSL 173
F+ + QN LI + S ++ A +F+++P ++ ++ +I +T + +AL+L
Sbjct: 29 FSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNL 88
Query: 174 FQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALIN 233
F +M + D V+S W ++I+
Sbjct: 89 FDEMPVRD--------------VVS------------W-----------------NSMIS 105
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
CG ++ +VK+F+EMP R+VV+WT+++ G G+ +A R F M D AA
Sbjct: 106 GCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPV----KDTAA 161
Query: 294 YTAALVACSHGGLVEDGWRVFESM--RSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVE 351
+ + + G V+D ++F+ M ++ M+ C +D R+G L+ FK +
Sbjct: 162 WNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMI----CGLDQNERSGEALDLFKNML 217
Query: 352 DMPIKPNSVIWRTLLGACVN 371
IK S + ++ AC N
Sbjct: 218 RCCIKSTSRPFTCVITACAN 237
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 164/439 (37%), Positives = 241/439 (54%), Gaps = 6/439 (1%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N +I + G LA + +++ +W+ +I + N EAL + M
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
P + S ++A + LG L WVH+ + +G+ L L +AL+++Y++CG I
Sbjct: 162 KP---NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGT 218
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSH 303
S +VF + +V W ++ITG A HG + EA+R F +M + PD + L CSH
Sbjct: 219 SREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSH 278
Query: 304 GGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWR 363
GL+E+G F M + + P LEHYG MVDLLGRAG + EA++ +E MPI+P+ VIWR
Sbjct: 279 CGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWR 338
Query: 364 TLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENR 423
+LL + + + L E A + L GDYVLLSN Y VR M +
Sbjct: 339 SLLSSSRTYKNPELGEIA---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEG 395
Query: 424 IVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHDIQ 483
I K G S + ++H F +GD SH + + I K L ++ K G+ +T VL D+
Sbjct: 396 IRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVS 455
Query: 484 EEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDIIIR 543
EEEKE +L YHSEKLA+A+V+L IR+ KN+R+C DCH+++K VS + ++ II+R
Sbjct: 456 EEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMR 515
Query: 544 DRNRFHHFSKGSCSCGDFW 562
DR RFH F G CSC D+W
Sbjct: 516 DRIRFHRFEDGLCSCRDYW 534
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G N + +AL++ Y G + + +F + + D++ W+ +I F +G EA+ +F
Sbjct: 195 GIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVF 254
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYI-RRAGLGLTVPLGTALIN 233
+M+ S D + L +++ S G LE G + RR + + A+++
Sbjct: 255 SEMEAEHV----SPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVD 310
Query: 234 MYSRCGSIDRSVKVFEEMP-HRNVVTWTSLIT 264
+ R G + + ++ E MP +VV W SL++
Sbjct: 311 LLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 308 bits (789), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 155/452 (34%), Positives = 251/452 (55%), Gaps = 8/452 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLA----SWSTLIVCFTNNGYPAEA 170
G + N+L + Y + G A+ + +M ++ +A SW+ + + NG A
Sbjct: 321 GIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNA 380
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
L +F +MQ + + M +++ + L L G VH + R L + TA
Sbjct: 381 LKVFIKMQ----EEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATA 436
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
L++MY + G + ++++F + ++++ +W ++ G A+ GR E + AF M EAG+ PD
Sbjct: 437 LVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPD 496
Query: 291 GAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFV 350
+T+ L C + GLV++GW+ F+ MRS YG+ P +EH CMVDLLGR+G L EA+ F+
Sbjct: 497 AITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFI 556
Query: 351 EDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXX 410
+ M +KP++ IW L +C H DL LAE A +R+ L+PH+ +Y+++ N Y
Sbjct: 557 QTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWE 616
Query: 411 XXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGG 470
+RN MR NR+ + S + IDQ VH F + +HP +I L +V +K G
Sbjct: 617 DVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSG 676
Query: 471 YAPNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMK 530
Y P+TS + DI + EKE L H+EKLA+ + L+ + IRV+KN IC D H+ K
Sbjct: 677 YVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAK 736
Query: 531 HVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
++S + +++I++++ R HHF G CSC D W
Sbjct: 737 YMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 164/411 (39%), Gaps = 81/411 (19%)
Query: 7 LHATLIKTGQHNNPLSLRT----FFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIR 62
+H LIK G N+ + + F+ RC L +A + P D +N ++
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSL------GFANKLFDEMPKRDDLAWNEIVM 62
Query: 63 -HLALHSPTLATTLFSHMHRTGVTV-DHFTFPLIXXXXXXXXXXXXXXX--XXXXXGFAS 118
+L + A LF M +G D L+ G S
Sbjct: 63 VNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLES 122
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N+ + N+LI Y +G L L+ +F+ M R+L+SW++++ +T GY +A+ L +M+
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 179 L---------------GDPQVPESTDGVMML----------------SVISAVSSLGALE 207
+ G S D + +L S++ AV+ G L+
Sbjct: 183 ICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLK 242
Query: 208 LGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGL- 266
LG +H YI R L V + T LI+MY + G + + VF+ M +N+V W SL++GL
Sbjct: 243 LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLS 302
Query: 267 ----------------------------------AVHGRSREALRAFRDMREAGLRPDGA 292
A G+ +AL M+E G+ P+
Sbjct: 303 YACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVV 362
Query: 293 AYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGML 343
++TA CS G + +VF M+ E GV P ++ +LG +L
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEE-GVGPNAATMSTLLKILGCLSLL 412
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 306 bits (783), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 185/568 (32%), Positives = 281/568 (49%), Gaps = 22/568 (3%)
Query: 7 LHATLIKTGQHNNPL---SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRH 63
LH ++ +G N + +L + + + E+ S + VLL+ P D +N +I
Sbjct: 367 LHGLVVVSGLFYNQIIGNALVSMYGKIGEM------SESRRVLLQMPRRDVVAWNALIGG 420
Query: 64 LAL-HSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXX----XXXXXXXXXXXXXXGFAS 118
A P A F M GV+ ++ T + GF S
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
+ V+N+LI Y G L+ + LF+ + R++ +W+ ++ ++G+ E L L +M+
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 540
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
S D +SA + L LE G +H + G + A +MYS+C
Sbjct: 541 ----SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKC 596
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G I VK+ +R++ +W LI+ L HG E F +M E G++P + + L
Sbjct: 597 GEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLL 656
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
ACSHGGLV+ G ++ + ++G+ P +EH C++DLLGR+G L EA F+ MP+KPN
Sbjct: 657 TACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPN 716
Query: 359 SVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNS 418
++WR+LL +C H +L KA E +++L+P D YVL SN + VR
Sbjct: 717 DLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQ 776
Query: 419 MRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSV 478
M I K+ S V + V F GD +HPQ EI L + IK GY +TS
Sbjct: 777 MGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQA 836
Query: 479 LHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDK 538
L D EE+KEH+L HSE+LA+A+ L+ + +R+ KNLRIC DCHS K VS + +
Sbjct: 837 LQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGR 896
Query: 539 DIIIRDRNRFHHFSKGSCSCG----DFW 562
I++RD+ RFHHF +G G FW
Sbjct: 897 RIVLRDQYRFHHFERGLFGKGSGFQQFW 924
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 129/263 (49%), Gaps = 12/263 (4%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G S + V+N+LI+ GS G+++ A ++FD+M +RD SW+++ + NG+ E+ +F
Sbjct: 173 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 232
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIW---VHAYIRRAGLGLTVPLGTAL 231
M+ +V +T V + +S LG ++ W +H + + G V + L
Sbjct: 233 SLMRRFHDEVNSTT-------VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTL 285
Query: 232 INMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDG 291
+ MY+ G + VF++MP +++++W SL+ GRS +AL M +G +
Sbjct: 286 LRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNY 345
Query: 292 AAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVE 351
+T+AL AC E G R+ + G++ +V + G+ G + E+ + +
Sbjct: 346 VTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLL 404
Query: 352 DMPIKPNSVIWRTLLGACVNHND 374
MP + + V W L+G D
Sbjct: 405 QMP-RRDVVAWNALIGGYAEDED 426
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 5/197 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF S + V N L+ Y +G A +F +MP +DL SW++L+ F N+G +AL L
Sbjct: 274 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL 333
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M +S + V S ++A + E G +H + +GL +G AL++M
Sbjct: 334 CSM----ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSM 389
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y + G + S +V +MP R+VV W +LI G A +AL AF+ MR G+ +
Sbjct: 390 YGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITV 449
Query: 295 TAALVAC-SHGGLVEDG 310
+ L AC G L+E G
Sbjct: 450 VSVLSACLLPGDLLERG 466
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 127/258 (49%), Gaps = 8/258 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G S+++V A+++ YG G ++ + +F+EMP R++ SW++L+V +++ G P E + ++
Sbjct: 72 GLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY 131
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+ M+ E++ M VIS+ L LG + + ++GL + + +LI+M
Sbjct: 132 KGMRGEGVGCNENS----MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISM 187
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
G++D + +F++M R+ ++W S+ A +G E+ R F MR +
Sbjct: 188 LGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTV 247
Query: 295 TAALVACSHGGLVEDGW-RVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+ L H + W R + + G ++ ++ + AG +EA + M
Sbjct: 248 STLLSVLGH--VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQM 305
Query: 354 PIKPNSVIWRTLLGACVN 371
P K + + W +L+ + VN
Sbjct: 306 PTK-DLISWNSLMASFVN 322
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 119/227 (52%), Gaps = 13/227 (5%)
Query: 146 MPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGA 205
MP R+ SW+T++ G E + F++M D + S+ ++ S+++A G+
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC--DLGIKPSS--FVIASLVTACGRSGS 56
Query: 206 L-ELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLIT 264
+ G+ VH ++ ++GL V + TA++++Y G + S KVFEEMP RNVV+WTSL+
Sbjct: 57 MFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMV 116
Query: 265 GLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVED---GWRVFESMRSEY 321
G + G E + ++ MR G+ + + + + +C GL++D G ++ + +
Sbjct: 117 GYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQV-VKS 172
Query: 322 GVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGA 368
G+ L ++ +LG G + A ++ D + +++ W ++ A
Sbjct: 173 GLESKLAVENSLISMLGSMGNVDYA-NYIFDQMSERDTISWNSIAAA 218
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 305 bits (780), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 158/448 (35%), Positives = 259/448 (57%), Gaps = 5/448 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G+ +++FV ++L++ Y G + A +FDEMPQR++ +WS ++ + G EAL LF
Sbjct: 146 GYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLF 205
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
++ + V + + SVIS ++ LELG +H ++ + +G++L+++
Sbjct: 206 KEALFENLAVNDYS----FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSL 261
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
YS+CG + + +VF E+P +N+ W +++ A H +++ + F+ M+ +G++P+ +
Sbjct: 262 YSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITF 321
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
L ACSH GLV++G F+ M+ E + P +HY +VD+LGRAG L EA + + +MP
Sbjct: 322 LNVLNACSHAGLVDEGRYYFDQMK-ESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMP 380
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
I P +W LL +C H + LA A ++V EL P G ++ LSNAY
Sbjct: 381 IDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAK 440
Query: 415 VRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPN 474
R +R+ KE GLS V VH F +G+ H + +EI + L + + ++ GY +
Sbjct: 441 ARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIAD 500
Query: 475 TSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSG 534
TS VL ++ +EK ++ YHSE+LA+AF L+ + IRV+KNLR+C DCH+ +K +S
Sbjct: 501 TSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSV 560
Query: 535 IFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
+ II+RD NRFH F G CSC D+W
Sbjct: 561 CTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 127/253 (50%), Gaps = 6/253 (2%)
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLG 180
V N LIN Y S + F++ PQ+ +WS++I CF N P +L ++M G
Sbjct: 51 LVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAG 110
Query: 181 DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGS 240
+ + D ++ S + + L ++G VH + G V +G++L++MY++CG
Sbjct: 111 NLR----PDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGE 166
Query: 241 IDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVA 300
I + K+F+EMP RNVVTW+ ++ G A G + EAL F++ L + ++++ +
Sbjct: 167 IVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISV 226
Query: 301 CSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSV 360
C++ L+E G R + + +V L + G+ A++ ++P+K N
Sbjct: 227 CANSTLLELG-RQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLG 284
Query: 361 IWRTLLGACVNHN 373
IW +L A H+
Sbjct: 285 IWNAMLKAYAQHS 297
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 209 GIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAV 268
G+ +H Y+ ++GL L + LIN YS+ S + FE+ P ++ TW+S+I+ A
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 269 HGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRV-FESMRSEYGVYPML 327
+ +L + M LRPD +A +C+ + G V SM++ Y +
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153
Query: 328 EHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL 366
+VD+ + G ++ A K ++MP + N V W ++
Sbjct: 154 G--SSLVDMYAKCGEIVYARKMFDEMPQR-NVVTWSGMM 189
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 161/449 (35%), Positives = 247/449 (55%), Gaps = 8/449 (1%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
S+ + +L++ Y G L A FD++ ++ + SWS+LI+ + G EA+ LF+++
Sbjct: 245 SSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
Q + Q+ D + S+I + L G + A + GL + ++++MY +
Sbjct: 305 QELNSQI----DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLK 360
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
CG +D + K F EM ++V++WT +ITG HG ++++R F +M + PD Y A
Sbjct: 361 CGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAV 420
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
L ACSH G++++G +F + +G+ P +EHY C+VDLLGRAG L EA ++ MPIKP
Sbjct: 421 LSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKP 480
Query: 358 NSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRN 417
N IW+TLL C H D+ L ++ + + +D + +YV++SN Y R
Sbjct: 481 NVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARE 540
Query: 418 SMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLG-GYAPNTS 476
+ KE G+S V I++ VH F SG++SHP I + L ++ GY
Sbjct: 541 LGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLK 600
Query: 477 SVLHDIQEEEKEHSLGYHSEKLAVAFVLL---YHRDRKAIRVIKNLRICYDCHSFMKHVS 533
LHDI +E KE +L HSEKLA+ L ++ K IRV KNLR+C DCH F+K +S
Sbjct: 601 HELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLS 660
Query: 534 GIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
I ++RD RFH F G CSCGD+W
Sbjct: 661 KITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 139/283 (49%), Gaps = 10/283 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G N+ N LI+ Y +A +FD MP+R++ SWS L+ NG +LSLF
Sbjct: 36 GSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLF 95
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+M E T + + A L ALE G+ +H + + G + V +G +L++M
Sbjct: 96 SEMGRQGIYPNEFT----FSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM 151
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGL--RPDGA 292
YS+CG I+ + KVF + R++++W ++I G G +AL F M+EA + RPD
Sbjct: 152 YSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEF 211
Query: 293 AYTAALVACSHGGLVEDGWRVFESM-RSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVE 351
T+ L ACS G++ G ++ + RS + G +VDL + G L A K +
Sbjct: 212 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD 271
Query: 352 DMPIKPNSVI-WRTLLGACVNHNDLVLAEKAKERVNELDPHHD 393
IK ++I W +L+ + V A +R+ EL+ D
Sbjct: 272 Q--IKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQID 312
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 171/383 (44%), Gaps = 31/383 (8%)
Query: 6 NLHATLIKTGQHNNPLS---LRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIR 62
+H L+K+G N ++ L + +C E P L+ + + D P V+
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCRE-P-----------LMAYKVFDSMPERNVVS 74
Query: 63 HLALHSPTL-------ATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX---XX 112
AL S + + +LFS M R G+ + FTF
Sbjct: 75 WSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCL 134
Query: 113 XXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALS 172
GF + V N+L++ Y G +N A +F + R L SW+ +I F + GY ++AL
Sbjct: 135 KIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALD 194
Query: 173 LFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGL--TVPLGTA 230
F MQ + + E D + S++ A SS G + G +H ++ R+G + + +
Sbjct: 195 TFGMMQ--EANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGS 252
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
L+++Y +CG + + K F+++ + +++W+SLI G A G EA+ F+ ++E + D
Sbjct: 253 LVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQID 312
Query: 291 GAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFV 350
A ++ + + L+ G + +++ + +VD+ + G++ EA K
Sbjct: 313 SFALSSIIGVFADFALLRQG-KQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCF 371
Query: 351 EDMPIKPNSVIWRTLLGACVNHN 373
+M +K + + W ++ H
Sbjct: 372 AEMQLK-DVISWTVVITGYGKHG 393
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 91/178 (51%), Gaps = 2/178 (1%)
Query: 193 MLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMP 252
++S++ + G + G VH Y+ ++G GL + LI+MY +C + KVF+ MP
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 253 HRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWR 312
RNVV+W++L++G ++G + +L F +M G+ P+ ++ L AC +E G +
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 313 VFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACV 370
+ + G M+E +VD+ + G + EA K + + + + W ++ V
Sbjct: 129 I-HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAGFV 184
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 178/524 (33%), Positives = 272/524 (51%), Gaps = 16/524 (3%)
Query: 51 IPDPTPYNTVIRHLALHSP-TLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXX 109
+ D +N++I H A L+ M G +D FT +
Sbjct: 202 LRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQ 261
Query: 110 ---XXXXXGFASNIFVQNALINAYGSSGSLNL---AVHLFDEMPQRDLASWSTLIVCFT- 162
GF N V + LI+ Y G + + +F E+ DL W+T+I ++
Sbjct: 262 FHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSM 321
Query: 163 NNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGL- 221
N EA+ F+QMQ ++ D + V SA S+L + +H ++ +
Sbjct: 322 NEELSEEAVKSFRQMQ----RIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIP 377
Query: 222 GLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRD 281
+ + ALI++Y + G++ + VF+ MP N V++ +I G A HG EAL ++
Sbjct: 378 SNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQR 437
Query: 282 MREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAG 341
M ++G+ P+ + A L AC+H G V++G F +M+ + + P EHY CM+DLLGRAG
Sbjct: 438 MLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAG 497
Query: 342 MLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSN 401
L EA +F++ MP KP SV W LLGAC H ++ LAE+A + + P YV+L+N
Sbjct: 498 KLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLAN 557
Query: 402 AYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVS 461
Y VR SMR RI K+PG S + + + H FV+ D SHP E+ ++L
Sbjct: 558 MYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEE 617
Query: 462 VVDTIKLGGYAPNTSSVL---HDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKN 518
++ +K GY + + + E ++E LG+HSEKLAVAF L+ RD + + V+KN
Sbjct: 618 MMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKN 677
Query: 519 LRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
LRIC DCH+ +K +S + ++II+RD RFH F G CSCGD+W
Sbjct: 678 LRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 119/255 (46%), Gaps = 18/255 (7%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N+F N ++ AY +++A LFDE+PQ D S++TLI + + A+ LF++M+
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
++ DG + +I+A ++L +H + G + A + YS+
Sbjct: 133 ----KLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKG 186
Query: 239 GSIDRSVKVFEEMPH-RNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDG---AAY 294
G + +V VF M R+ V+W S+I H +AL +++M G + D A+
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAG---MLLEAFKFVE 351
AL + H L+ G R F + G + ++D + G + ++ K +
Sbjct: 247 LNALTSLDH--LI--GGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQ 302
Query: 352 DMPIKPNSVIWRTLL 366
++ + P+ V+W T++
Sbjct: 303 EI-LSPDLVVWNTMI 316
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 171/484 (35%), Positives = 252/484 (52%), Gaps = 32/484 (6%)
Query: 4 VYNLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRH 63
V ++HA +I+T + + C+ L S D YA V P+ Y +I
Sbjct: 45 VPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVD---YAYDVFSYVSNPNVYLYTAMIDG 101
Query: 64 LALHSPTL-ATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXXXXXGFASNIFV 122
+ +L+ M V D++ + GF S+ V
Sbjct: 102 FVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVLKL-GFGSSRSV 160
Query: 123 QNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDP 182
++ YG SG L A +FDEMP RD + + +I C++ G+ EAL LFQ +++ D
Sbjct: 161 GLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDT 220
Query: 183 --------------------------QVPE-STDGVMMLSVISAVSSLGALELGIWVHAY 215
Q+ S + + V+SA S LGALELG WVH++
Sbjct: 221 VCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSF 280
Query: 216 IRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREA 275
+ + L+ +G ALINMYSRCG I+ + +VF M ++V+++ ++I+GLA+HG S EA
Sbjct: 281 VENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEA 340
Query: 276 LRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVD 335
+ FRDM G RP+ A L ACSHGGL++ G VF SM+ + V P +EHYGC+VD
Sbjct: 341 INEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVD 400
Query: 336 LLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGD 395
LLGR G L EA++F+E++PI+P+ ++ TLL AC H ++ L EK +R+ E + G
Sbjct: 401 LLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGT 460
Query: 396 YVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEI 455
YVLLSN Y +R SMR++ I KEPG S + +D +HEF+ GD +HP E I
Sbjct: 461 YVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAI 520
Query: 456 MKFL 459
+ L
Sbjct: 521 YQRL 524
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 292 bits (747), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 247/497 (49%), Gaps = 19/497 (3%)
Query: 72 ATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXX---XXXXXXXXXXGFASNIFVQNALIN 128
A LF + GV D F F ++ G S + V L++
Sbjct: 269 ALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVD 328
Query: 129 AYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPEST 188
Y S A F E+ + + SWS +I + EA+ F+ ++ + + S
Sbjct: 329 FYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNS- 387
Query: 189 DGVMMLSVISAVSSLGALELGIWVHA-YIRRAGLGLTVPLGTALINMYSRCGSIDRSVKV 247
S+ A S L +G VHA I+R+ +G +ALI MYS+CG +D + +V
Sbjct: 388 --FTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG-ESALITMYSKCGCLDDANEV 444
Query: 248 FEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLV 307
FE M + ++V WT+ I+G A +G + EALR F M G++P+ + A L ACSH GLV
Sbjct: 445 FESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLV 504
Query: 308 EDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLG 367
E G ++M +Y V P ++HY CM+D+ R+G+L EA KF+++MP +P+++ W+ L
Sbjct: 505 EQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLS 564
Query: 368 ACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKE 427
C H +L L E A E + +LDP YVL N Y + M E + KE
Sbjct: 565 GCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKE 624
Query: 428 PGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHDIQEEEK 487
S + +H F+ GD HPQ +EI + KL + + E+
Sbjct: 625 LSCSWIQEKGKIHRFIVGDKHHPQTQEIYE---------KLKEFDGFMEGDMFQCNMTER 675
Query: 488 EHSLGYHSEKLAVAFVLL-YHRDRKA-IRVIKNLRICYDCHSFMKHVSGIFDKDIIIRDR 545
L HSE+LA+AF L+ H + A I+V KNLR C DCH F KHVS + +I+IRD
Sbjct: 676 REQLLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDS 735
Query: 546 NRFHHFSKGSCSCGDFW 562
RFHHF +G CSC D+W
Sbjct: 736 RRFHHFKEGKCSCNDYW 752
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 126/252 (50%), Gaps = 7/252 (2%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
++ +QN ++ Y SL A LFDEM + + S +T+I + G +A+ LF M
Sbjct: 117 SVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGML 176
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+ P S M +++ ++ + AL+ G +HA++ RAGL + T ++NMY +C
Sbjct: 177 ASGDKPPSS----MYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKC 232
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G + + +VF++M + V T L+ G GR+R+AL+ F D+ G+ D ++ L
Sbjct: 233 GWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVL 292
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
AC+ + G ++ + ++ G+ + +VD + A + +++ +PN
Sbjct: 293 KACASLEELNLGKQIHACV-AKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPN 350
Query: 359 SVIWRTLL-GAC 369
V W ++ G C
Sbjct: 351 DVSWSAIISGYC 362
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 43/298 (14%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G SN ++ ++N Y G L A +FD+M + + + L+V +T G +AL LF
Sbjct: 214 GLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLF 273
Query: 175 QQMQLGDPQVPEST--DGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALI 232
+ V E D + V+ A +SL L LG +HA + + GL V +GT L+
Sbjct: 274 VDL------VTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLV 327
Query: 233 NMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRP-DG 291
+ Y +C S + + + F+E+ N V+W+++I+G + EA++ F+ +R +
Sbjct: 328 DFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNS 387
Query: 292 AAYTAALVACSH------GGLVEDGWRVFESMRSEYGVYPMLEHY---GCMVD------- 335
YT+ ACS GG V + S+YG ++ Y GC+ D
Sbjct: 388 FTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFES 447
Query: 336 ------------LLGRA--GMLLEAFKFVEDM---PIKPNSVIWRTLLGACVNHNDLV 376
+ G A G EA + E M +KPNSV + +L AC +H LV
Sbjct: 448 MDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTAC-SHAGLV 504
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 104/258 (40%), Gaps = 47/258 (18%)
Query: 169 EALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLG 228
EA Q+M V + + A L +L G +H +R +V L
Sbjct: 66 EAFEFLQEMDKAGVSVSSYS----YQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQ 121
Query: 229 TALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLR 288
++ MY C S++ + K+F+EM N V+ T++I+ A G +A+ F M +G +
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181
Query: 289 PDGAAYTAALVA----------------------CSHGGL--------VEDGW-----RV 313
P + YT L + CS+ + V+ GW RV
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 314 FESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM---PIKPNSVIWRTLLGACV 370
F+ M V + G MV +AG +A K D+ ++ +S ++ +L AC
Sbjct: 242 FDQM----AVKKPVACTGLMVGYT-QAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
Query: 371 NHNDLVLAEKAKERVNEL 388
+ +L L ++ V +L
Sbjct: 297 SLEELNLGKQIHACVAKL 314
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 291 bits (746), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 253/449 (56%), Gaps = 8/449 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF S + Q +L+ Y ++ ++ +F + + SW++LI NG AL F
Sbjct: 297 GFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEF 356
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
++M + D P S + S + S+L E G +H + + G G+ LI++
Sbjct: 357 RKM-MRDSIKPNS---FTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDL 412
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y +CG D + VF+ + +V++ ++I A +G REAL F M GL+P+
Sbjct: 413 YGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTV 472
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
+ L+AC++ LVE+G +F+S R + + +HY CMVDLLGRAG L EA ++
Sbjct: 473 LSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV- 530
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
I P+ V+WRTLL AC H + +AE+ ++ E++P +G +L+SN Y
Sbjct: 531 INPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIE 590
Query: 415 VRNSMRENRIVKEPGLSVVHIDQVVHEFVSGD-NSHPQWEEIMKFLVSVVDTIKLGGYAP 473
+++ M++ ++ K P +S V I++ H F++GD SHP E+I++ L ++ K GY
Sbjct: 591 MKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVE 650
Query: 474 NTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVS 533
+ S V D++E KE SL HSEKLA+AF + + +IR++KNLR+C DCHS++K VS
Sbjct: 651 DKSCVFQDMEETAKERSLHQHSEKLAIAFAV-WRNVGGSIRILKNLRVCVDCHSWIKIVS 709
Query: 534 GIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
+ ++II RD RFHHF GSCSCGD+W
Sbjct: 710 RVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 121/225 (53%), Gaps = 7/225 (3%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
SN+FV +AL++ Y G A + D + ++D+ + LIV ++ G EA+ FQ M
Sbjct: 199 SNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSM 258
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
+ Q E T SV+ + +L + G +H + ++G + T+L+ MY R
Sbjct: 259 LVEKVQPNEYT----YASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLR 314
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
C +D S++VF+ + + N V+WTSLI+GL +GR AL FR M ++P+ ++A
Sbjct: 315 CSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSA 374
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGC-MVDLLGRAG 341
L CS+ + E+G R + ++YG + ++ G ++DL G+ G
Sbjct: 375 LRGCSNLAMFEEG-RQIHGIVTKYG-FDRDKYAGSGLIDLYGKCG 417
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 135/283 (47%), Gaps = 16/283 (5%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF + I + L++A G ++ A +FD M +R + +W++LI + EA+ ++
Sbjct: 95 GFPAEI-SGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMY 153
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLT-VPLGTALIN 233
+ M + + +P D + SV A S L + H GL ++ V +G+AL++
Sbjct: 154 RLM-ITNNVLP---DEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVD 209
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
MY + G + V + + ++VV T+LI G + G EA++AF+ M ++P+
Sbjct: 210 MYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYT 269
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGML---LEAFKFV 350
Y + L++C + + +G ++ + + G L ++ + R ++ L FK +
Sbjct: 270 YASVLISCGNLKDIGNG-KLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCI 328
Query: 351 EDMPIKPNSVIWRTLLGACVNH--NDLVLAEKAKERVNELDPH 391
E PN V W +L+ V + ++ L E K + + P+
Sbjct: 329 E----YPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPN 367
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 212 VHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGR 271
+ A++ ++G + G+ L++ +CG ID + +VF+ M R++VTW SLI L H R
Sbjct: 87 IQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRR 145
Query: 272 SREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWR 312
S+EA+ +R M + PD ++ A S L ++ R
Sbjct: 146 SKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQR 186
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 172/492 (34%), Positives = 265/492 (53%), Gaps = 47/492 (9%)
Query: 8 HATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLAL- 66
H +I TG + + L++ F C+ +A YA +V P P+ +NT+IR L+L
Sbjct: 35 HCYMIITGLNRDNLNVAKFIEACS---NAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLL 91
Query: 67 ---HSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXX---XXXXXXXXXXGFASNI 120
++ ++A T++ + D FTFP + GF S++
Sbjct: 92 DEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSV 151
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQRDL----------------------------- 151
V LI Y S G L A +FDEM +D+
Sbjct: 152 HVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCW 211
Query: 152 ----ASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALE 207
SW+ +I + +G +EA+ +FQ+M + + + D V +L+V+SA + LG+LE
Sbjct: 212 VRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVE----PDEVTLLAVLSACADLGSLE 267
Query: 208 LGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLA 267
LG + +Y+ G+ V L A+I+MY++ G+I +++ VFE + RNVVTWT++I GLA
Sbjct: 268 LGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLA 327
Query: 268 VHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPML 327
HG EAL F M +AG+RP+ + A L ACSH G V+ G R+F SMRS+YG++P +
Sbjct: 328 THGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNI 387
Query: 328 EHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNE 387
EHYGCM+DLLGRAG L EA + ++ MP K N+ IW +LL A H+DL L E+A + +
Sbjct: 388 EHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIK 447
Query: 388 LDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDN 447
L+P++ G+Y+LL+N Y +RN M+ + K G S + ++ V++F+SGD
Sbjct: 448 LEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDL 507
Query: 448 SHPQWEEIMKFL 459
+HPQ E I + L
Sbjct: 508 THPQVERIHEIL 519
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 285 bits (730), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 141/358 (39%), Positives = 214/358 (59%), Gaps = 5/358 (1%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N N +I+ Y SG ++ A +FD+MP+RDL SW+ +I F GY EAL F++MQ
Sbjct: 139 NSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQ 198
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+ + D V +++ ++A ++LGAL G+WVH Y+ V + +LI++Y RC
Sbjct: 199 ISGVK----PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRC 254
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G ++ + +VF M R VV+W S+I G A +G + E+L FR M+E G +PD +T AL
Sbjct: 255 GCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGAL 314
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
ACSH GLVE+G R F+ M+ +Y + P +EHYGC+VDL RAG L +A K V+ MP+KPN
Sbjct: 315 TACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPN 374
Query: 359 SVIWRTLLGACVNH-NDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRN 417
V+ +LL AC NH N++VLAE+ + + +L+ +YV+LSN Y +R
Sbjct: 375 EVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRR 434
Query: 418 SMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNT 475
M+ + K+PG S + ID +H F++GDN+H + I + L + ++L G T
Sbjct: 435 KMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 40/284 (14%)
Query: 137 NLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSV 196
N + ++ SW++ I T NG AEA F M L + P + +LS
Sbjct: 22 NPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVE-PNHITFIALLSG 80
Query: 197 ISAVSSLGALELGIWVHAYIRRAGLGLT-VPLGTALINMYS------------------- 236
+S G+ LG +H Y + GL V +GTA+I MYS
Sbjct: 81 CGDFTS-GSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKN 139
Query: 237 ------------RCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE 284
R G +D + K+F++MP R++++WT++I G G EAL FR+M+
Sbjct: 140 SVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQI 199
Query: 285 AGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLL 344
+G++PD A AAL AC++ G + G V + S+ + ++DL R G +
Sbjct: 200 SGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQ-DFKNNVRVSNSLIDLYCRCGCVE 258
Query: 345 EAFKFVEDMPIKPNSVIWRT-LLGACVN---HNDLVLAEKAKER 384
A + +M K V W + ++G N H LV K +E+
Sbjct: 259 FARQVFYNME-KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEK 301
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
F +N+ V N+LI+ Y G + A +F M +R + SW+++IV F NG E+L F+
Sbjct: 237 FKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFR 296
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIR-RAGLGLTVPLGTALINM 234
+MQ + D V ++A S +G +E G+ ++ + + L+++
Sbjct: 297 KMQ----EKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDL 352
Query: 235 YSRCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVHGRS 272
YSR G ++ ++K+ + MP + N V SL+ + HG +
Sbjct: 353 YSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNN 391
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/452 (32%), Positives = 236/452 (52%), Gaps = 8/452 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G N FV LI+ Y G + A F+ MP++ +W+ +I + +GY EAL L
Sbjct: 254 GVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLL 313
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M+ + + T +M I + L LEL HA + R G + TAL++
Sbjct: 314 YDMRDSGVSIDQFTLSIM----IRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDF 369
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
YS+ G +D + VF+++P +N+++W +L+ G A HGR +A++ F M A + P+ +
Sbjct: 370 YSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTF 429
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
A L AC++ GL E GW +F SM +G+ P HY CM++LLGR G+L EA F+ P
Sbjct: 430 LAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAP 489
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
+K +W LL AC +L L E++ + P G+YV++ N Y
Sbjct: 490 LKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAG 549
Query: 415 VRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVD----TIKLGG 470
V ++ + P + V + H F+SGD E + + + VD I G
Sbjct: 550 VLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYG 609
Query: 471 YAPNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMK 530
Y+ +L D+ E+E+E YHSEKLA+A+ L+ + +++ +N RIC +CH ++
Sbjct: 610 YSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVE 669
Query: 531 HVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
+S + +++++RD +RFHHF +G CSCG +W
Sbjct: 670 FISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 133/291 (45%), Gaps = 30/291 (10%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF ++ N ++ + G + A LFDE+P+R+L S+ ++I F N G EA LF
Sbjct: 153 GFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELF 212
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+ M T VM+ A + LG++ +G +H + G+ + LI+M
Sbjct: 213 KMMWEELSDCETHTFAVML----RASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDM 268
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
YS+CG I+ + FE MP + V W ++I G A+HG S EAL DMR++G+ D
Sbjct: 269 YSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTL 328
Query: 295 TA-----------ALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGML 343
+ L +H L+ +G FES + +VD + G +
Sbjct: 329 SIMIRISTKLAKLELTKQAHASLIRNG---FES---------EIVANTALVDFYSKWGRV 376
Query: 344 LEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERV--NELDPHH 392
A ++V D + N + W L+G NH A K E++ + P+H
Sbjct: 377 DTA-RYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNH 426
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 172/533 (32%), Positives = 263/533 (49%), Gaps = 53/533 (9%)
Query: 6 NLHATLIKTGQHNN---PLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIR 62
+H ++K+G N +L + +C E+ SA A+L + D +N++I
Sbjct: 248 QVHCCIVKSGFKTNIYVQSALIDMYAKCREMESA------RALLEGMEVDDVVSWNSMIV 301
Query: 63 HLALHSPT-LATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXX----XXXGFA 117
A ++F MH + +D FT P I G+A
Sbjct: 302 GCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYA 361
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
+ V NAL++ Y G ++ A+ +F+ M ++D+ SW+ L+ T+NG EAL LF M
Sbjct: 362 TYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNM 421
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
++G + D ++ SV+SA + L LE G VH ++G ++ + +L+ MY++
Sbjct: 422 RVGGI----TPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTK 477
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
CGS++ + +F M R+++TWT LI G A
Sbjct: 478 CGSLEDANVIFNSMEIRDLITWTCLIVGYA------------------------------ 507
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
GL+ED R F+SMR+ YG+ P EHY CM+DL GR+G ++ + + M ++P
Sbjct: 508 -----KNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEP 562
Query: 358 NSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRN 417
++ +W+ +L A H ++ E+A + + EL+P++ YV LSN Y VR
Sbjct: 563 DATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRR 622
Query: 418 SMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSS 477
M+ I KEPG S V VH F+S D HP+ EI + ++ IK GY + S
Sbjct: 623 LMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSF 682
Query: 478 VLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMK 530
LHD+ +E KE L YHSEKLAVAF LL IR+IKNLR+C DCHS MK
Sbjct: 683 ALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMK 735
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 131/274 (47%), Gaps = 7/274 (2%)
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLG 180
F N +I AY +S L+ A LF P ++ SW+ LI + +G EA +LF +MQ
Sbjct: 60 FTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSD 119
Query: 181 DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGS 240
+ E T G SV+ +SL L G +H + + G L V + L+ MY++C
Sbjct: 120 GIKPNEYTLG----SVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKR 175
Query: 241 IDRSVKVFEEMP-HRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
I + +FE M +N VTWTS++TG + +G + +A+ FRD+R G + + + + L
Sbjct: 176 ISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLT 235
Query: 300 ACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNS 359
AC+ G +V + + G + ++D+ + + A +E M + +
Sbjct: 236 ACASVSACRVGVQVHCCI-VKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEV-DDV 293
Query: 360 VIWRTLLGACVNHNDLVLAEKAKERVNELDPHHD 393
V W +++ CV + A R++E D D
Sbjct: 294 VSWNSMIVGCVRQGLIGEALSMFGRMHERDMKID 327
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 149/333 (44%), Gaps = 32/333 (9%)
Query: 50 PIPDPTPYNTVIR-HLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXX 108
P+ + +N +I + S A LF M G+ + +T +
Sbjct: 86 PVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGE 145
Query: 109 XX---XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMP-QRDLASWSTLIVCFTNN 164
GF ++ V N L+ Y ++ A +LF+ M +++ +W++++ ++ N
Sbjct: 146 QIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQN 205
Query: 165 GYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLT 224
G+ +A+ F+ ++ Q + T SV++A +S+ A +G+ VH I ++G
Sbjct: 206 GFAFKAIECFRDLRREGNQSNQYT----FPSVLTACASVSACRVGVQVHCCIVKSGFKTN 261
Query: 225 VPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE 284
+ + +ALI+MY++C ++ + + E M +VV+W S+I G G EAL F M E
Sbjct: 262 IYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHE 321
Query: 285 AGLRPD-----------GAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCM 333
++ D + T +A S L+ +++ Y Y ++ + +
Sbjct: 322 RDMKIDDFTIPSILNCFALSRTEMKIASSAHCLI---------VKTGYATYKLVNN--AL 370
Query: 334 VDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL 366
VD+ + G++ A K E M I+ + + W L+
Sbjct: 371 VDMYAKRGIMDSALKVFEGM-IEKDVISWTALV 402
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 137/333 (41%), Positives = 203/333 (60%), Gaps = 5/333 (1%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
+ +I+ Y + ++ A LFD MP+R+L SW+T+I + N P E + LFQ+M
Sbjct: 205 KTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEM 264
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
Q P D V +LSV+ A+S GAL LG W H +++R L V + TA+++MYS+
Sbjct: 265 QATTSLDP---DDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSK 321
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
CG I+++ ++F+EMP + V +W ++I G A++G +R AL F M +PD A
Sbjct: 322 CGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAV 380
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
+ AC+HGGLVE+G + F MR E G+ +EHYGCMVDLLGRAG L EA + +MP +P
Sbjct: 381 ITACNHGGLVEEGRKWFHVMR-EMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEP 439
Query: 358 NSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRN 417
N +I + L AC + D+ AE+ ++ EL+P +DG+YVLL N Y V+N
Sbjct: 440 NGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKN 499
Query: 418 SMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHP 450
MR+N+ KE G S++ I+ +V EF+SGD +HP
Sbjct: 500 VMRKNQAKKEVGCSLIEINYIVSEFISGDTTHP 532
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 128/282 (45%), Gaps = 22/282 (7%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF ++++V +++ Y G + A + FDEMP R SW+ LI + G A LF
Sbjct: 108 GFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLF 167
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
QM P D V+ +++ G + + + TV T +I+
Sbjct: 168 DQM-------PHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK----TVITWTTMIHG 216
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMR-EAGLRPDGAA 293
Y ID + K+F+ MP RN+V+W ++I G + + +E +R F++M+ L PD
Sbjct: 217 YCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVT 276
Query: 294 YTAALVACSHGGLVEDG-WRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVED 352
+ L A S G + G W R + + ++ ++D+ + G + +A + ++
Sbjct: 277 ILSVLPAISDTGALSLGEWCHCFVQRKK--LDKKVKVCTAILDMYSKCGEIEKAKRIFDE 334
Query: 353 MPIKPNSVIWRTLL-GACVNHN-----DLVLAEKAKERVNEL 388
MP K W ++ G +N N DL + +E+ +E+
Sbjct: 335 MPEK-QVASWNAMIHGYALNGNARAALDLFVTMMIEEKPDEI 375
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 20/259 (7%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRD--LASWSTLIVCFTNNGYPAEALSLFQQ 176
IF + +I+A S+ + A LFD+ PQRD S S + YP ++ +L++
Sbjct: 11 QIFTKFLVISA--SAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYP-DSFALYRD 67
Query: 177 MQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYS 236
++ P D ++ + S + G+ +H+ I R G + + T +++MY+
Sbjct: 68 LRKETCFAP---DNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYA 124
Query: 237 RCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTA 296
+ G + + F+EMPHR+ V+WT+LI+G G A + F M D Y A
Sbjct: 125 KFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNA 181
Query: 297 ALVACSHGGLVEDGWRVFESMRSEYGV-YPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPI 355
+ G + R+F+ M + + + + H C + + A L +A MP
Sbjct: 182 MMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDA------MP- 234
Query: 356 KPNSVIWRTLLGA-CVNHN 373
+ N V W T++G C N
Sbjct: 235 ERNLVSWNTMIGGYCQNKQ 253
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 138/365 (37%), Positives = 215/365 (58%), Gaps = 4/365 (1%)
Query: 117 ASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQ 176
A ++ +++ Y G+L LA FD+MP RD SW+ +I + G E+L +F++
Sbjct: 299 ARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFRE 358
Query: 177 MQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYS 236
MQ +P D M+SV++A + LG+LE+G W+ YI + + V +G ALI+MY
Sbjct: 359 MQSAG-MIP---DEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYF 414
Query: 237 RCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTA 296
+CG +++ KVF +M R+ TWT+++ GLA +G+ +EA++ F M++ ++PD Y
Sbjct: 415 KCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLG 474
Query: 297 ALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIK 356
L AC+H G+V+ + F MRS++ + P L HYGCMVD+LGRAG++ EA++ + MP+
Sbjct: 475 VLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMN 534
Query: 357 PNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVR 416
PNS++W LLGA HND +AE A +++ EL+P + Y LL N Y VR
Sbjct: 535 PNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVR 594
Query: 417 NSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTS 476
+ + I K PG S++ ++ HEFV+GD SH Q EEI L + Y P+TS
Sbjct: 595 RKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTS 654
Query: 477 SVLHD 481
+L +
Sbjct: 655 ELLFE 659
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 186/445 (41%), Gaps = 77/445 (17%)
Query: 2 NRVYNLHATLIKTGQHNNP-LSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTV 60
++ LH+ I G NP + F C+ L SYA + ++ P PD +N +
Sbjct: 48 DQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRL--GGHVSYAYKLFVKIPEPDVVVWNNM 105
Query: 61 IRHLA-LHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX----XXXXG 115
I+ + + L+ +M + GVT D TFP + G
Sbjct: 106 IKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFG 165
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
SN++VQNAL+ Y G +++A +FD + D+ SW+ +I + E++ L
Sbjct: 166 LGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLV 225
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMY 235
+M+ + S V +L V+SA S + +L VH Y+ ++ L AL+N Y
Sbjct: 226 EME----RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAY 281
Query: 236 SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHG--------------RSR-------- 273
+ CG +D +V++F M R+V++WTS++ G G R R
Sbjct: 282 AACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMID 341
Query: 274 ---------EALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDG-W--------RVFE 315
E+L FR+M+ AG+ PD + L AC+H G +E G W ++
Sbjct: 342 GYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKN 401
Query: 316 SMRSEYGVYPMLEHYGC---------------------MVDLLGRAGMLLEAFKF---VE 351
+ + M GC MV L G EA K ++
Sbjct: 402 DVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQ 461
Query: 352 DMPIKPNSVIWRTLLGACVNHNDLV 376
DM I+P+ + + +L AC NH+ +V
Sbjct: 462 DMSIQPDDITYLGVLSAC-NHSGMV 485
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 278 bits (710), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 151/449 (33%), Positives = 245/449 (54%), Gaps = 5/449 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF ++ ++ ALI+ YG G L A +FD M ++++ SW+++I + NG AL LF
Sbjct: 360 GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELF 419
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
Q++ VP+ST + S++ A + +L G +HAYI ++ + +L++M
Sbjct: 420 QEL-WDSSLVPDST---TIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHM 475
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y+ CG ++ + K F + ++VV+W S+I AVHG R ++ F +M + + P+ + +
Sbjct: 476 YAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTF 535
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
+ L ACS G+V++GW FESM+ EYG+ P +EHYGCM+DL+GR G A +F+E+MP
Sbjct: 536 ASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMP 595
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
P + IW +LL A NH D+ +AE A E++ +++ + G YVLL N Y
Sbjct: 596 FVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNR 655
Query: 415 VRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTI-KLGGYAP 473
++ M I + S V H F +GD SH +I + L V + + Y
Sbjct: 656 IKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVH 715
Query: 474 NTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVS 533
S + + + + +S HS +LA F L+ + + V N RIC CH F++ S
Sbjct: 716 CVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKAS 775
Query: 534 GIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
+ ++I++ D FHHFS G CSCG++W
Sbjct: 776 RLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 141/306 (46%), Gaps = 15/306 (4%)
Query: 72 ATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXX---XXXXXXGFASNIFVQNALIN 128
A +S M GV D FT+P + GF S+++V N+LI+
Sbjct: 114 AVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLIS 173
Query: 129 AYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPEST 188
Y G A +F+EMP+RD+ SW+++I + G +L LF++M +
Sbjct: 174 LYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEML----KCGFKP 229
Query: 189 DGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGL-TVPLGTALINMYSRCGSIDRSVKV 247
D +S + A S + + ++G +H + R+ + V + T++++MYS+ G + + ++
Sbjct: 230 DRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERI 289
Query: 248 FEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREA-GLRPDGAAYTAALVACSHGGL 306
F M RN+V W +I A +GR +A F+ M E GL+PD L A +
Sbjct: 290 FNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA---- 345
Query: 307 VEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL 366
+ +G R G P + ++D+ G G L A + + D + N + W +++
Sbjct: 346 ILEG-RTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSA-EVIFDRMAEKNVISWNSII 403
Query: 367 GACVNH 372
A V +
Sbjct: 404 AAYVQN 409
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 131/271 (48%), Gaps = 16/271 (5%)
Query: 127 INAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPE 186
+ + S + A+ LFDEM + D W+ +I FT+ G EA+ + +M +
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK--- 127
Query: 187 STDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVK 246
D VI +V+ + +LE G +HA + + G V + +LI++Y + G + K
Sbjct: 128 -ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 186
Query: 247 VFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGL 306
VFEEMP R++V+W S+I+G G +L F++M + G +PD + +AL ACSH
Sbjct: 187 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 246
Query: 307 VEDGWRV-FESMRS--EYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWR 363
+ G + ++RS E G ++ ++D+ + G + A + M I+ N V W
Sbjct: 247 PKMGKEIHCHAVRSRIETGDVMVMTS---ILDMYSKYGEVSYAERIFNGM-IQRNIVAWN 302
Query: 364 TLLGACVNHN----DLVLAEKAKERVNELDP 390
++G C N D L + N L P
Sbjct: 303 VMIG-CYARNGRVTDAFLCFQKMSEQNGLQP 332
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 12/274 (4%)
Query: 42 AAAVLLRFPIPDPTPYNTVIR-HLALHSPTLATTLFSHMHRTGVTVDHFT----FPLIXX 96
A V P D +N++I +LAL + LF M + G D F+
Sbjct: 184 AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
Query: 97 XXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWST 156
++ V ++++ Y G ++ A +F+ M QR++ +W+
Sbjct: 244 VYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNV 303
Query: 157 LIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYI 216
+I C+ NG +A FQ+M + P+ + +L A+ G +H Y
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA-------SAILEGRTIHGYA 356
Query: 217 RRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREAL 276
R G + L TALI+MY CG + + +F+ M +NV++W S+I +G++ AL
Sbjct: 357 MRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSAL 416
Query: 277 RAFRDMREAGLRPDGAAYTAALVACSHGGLVEDG 310
F+++ ++ L PD + L A + + +G
Sbjct: 417 ELFQELWDSSLVPDSTTIASILPAYAESLSLSEG 450
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 241/457 (52%), Gaps = 17/457 (3%)
Query: 115 GFASNIFVQNALINAYGSS-GSLNLAVHLFDEMPQ-RDLASWSTLIVCFTNNGYPAEALS 172
G + V ALI Y LF EM RD+ +W+ +I F P A+
Sbjct: 297 GLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIH 355
Query: 173 LFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALI 232
LF Q++ Q S D SV+ A + L + +HA + + G L +LI
Sbjct: 356 LFGQLR----QEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLI 411
Query: 233 NMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGA 292
+ Y++CGS+D ++VF++M R+VV+W S++ ++HG+ L F+ M + PD A
Sbjct: 412 HAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSA 468
Query: 293 AYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVED 352
+ A L ACSH G VE+G R+F SM + P L HY C++D+L RA EA + ++
Sbjct: 469 TFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQ 528
Query: 353 MPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNEL-DPHHDGDYVLLSNAYXXXXXXXX 411
MP+ P++V+W LLG+C H + L + A +++ EL +P + Y+ +SN Y
Sbjct: 529 MPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNE 588
Query: 412 XXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGY 471
M R+ KEP LS I VHEF SG P E + + L ++ +K GY
Sbjct: 589 ANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGY 648
Query: 472 APNT-SSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDR-----KAIRVIKNLRICYDC 525
P S+ EE++E +L +HSEKLA+AF ++ R I+++KN RIC DC
Sbjct: 649 VPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDC 708
Query: 526 HSFMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
H+FMK S + K+I++RD NRFHHF SCSC D+W
Sbjct: 709 HNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 12/180 (6%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
++ N+ + N LIN Y G++ A +FD MP+R++ SW+ LI + G E LF
Sbjct: 92 YSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFS 151
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMY 235
M L E T +S+V + E G VH + GL ++ + A+I+MY
Sbjct: 152 SM-LSHCFPNEFT--------LSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMY 202
Query: 236 SRC---GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGA 292
RC + + VFE + +N+VTW S+I ++A+ F M G+ D A
Sbjct: 203 GRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRA 262
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 132/308 (42%), Gaps = 70/308 (22%)
Query: 115 GFASNIFVQNALINAYG---SSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEAL 171
G +I+V NA+I+ YG + A +F+ + ++L +W+++I F +A+
Sbjct: 187 GLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAI 246
Query: 172 SLFQQMQLGDPQVPESTDGV-----MMLSVISAVSSLGAL------ELGIWVHAYIRRAG 220
+F +M +DGV +L++ S++ L + + +H+ ++G
Sbjct: 247 GVFMRMH---------SDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSG 297
Query: 221 LGLTVPLGTALINMYSR-CGSIDRSVKVFEEMPH-RNVVTWTSLITGLAVHGRSREALRA 278
L + TALI +YS K+F EM H R++V W +IT AV+ R A+
Sbjct: 298 LVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPER-AIHL 356
Query: 279 FRDMREAGLRPDGAAYTAALVACS-----------HGGLVEDGW---------------- 311
F +R+ L PD +++ L AC+ H +++ G+
Sbjct: 357 FGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAK 416
Query: 312 --------RVFESMRSEYGVY--PMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVI 361
RVF+ M S V ML+ Y L G+ +L F + M I P+S
Sbjct: 417 CGSLDLCMRVFDDMDSRDVVSWNSMLKAYS----LHGQVDSILPVF---QKMDINPDSAT 469
Query: 362 WRTLLGAC 369
+ LL AC
Sbjct: 470 FIALLSAC 477
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 225 VPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE 284
V L LINMY++CG+I + +VF+ MP RNVV+WT+LITG G +E F M
Sbjct: 96 VILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS 155
Query: 285 AGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRA---G 341
P+ ++ L +C + E G +V + + G++ + ++ + GR
Sbjct: 156 HCF-PNEFTLSSVLTSCRY----EPGKQV-HGLALKLGLHCSIYVANAVISMYGRCHDGA 209
Query: 342 MLLEAFKFVEDMPIKPNSVIWRTLLGA--CVN 371
EA+ E + K N V W +++ A C N
Sbjct: 210 AAYEAWTVFEAIKFK-NLVTWNSMIAAFQCCN 240
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 268 bits (685), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 167/498 (33%), Positives = 249/498 (50%), Gaps = 46/498 (9%)
Query: 1 MNRVYNLHATLIKTG-QHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNT 59
M+ +Y +H LI G P +T L + L S+ YA L + P +N
Sbjct: 21 MSELYKIHTLLITLGLSEEEPFVSQT--LSFSALSSSGDVDYAYKFLSKLSDPPNYGWNF 78
Query: 60 VIRHLA-LHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXX---XXXXXG 115
VIR + +P + +++ M R G+ DH T+P + G
Sbjct: 79 VIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSG 138
Query: 116 FASNIFVQNALINAYGS-------------------------------SGSLNLAVHLFD 144
++F+ N LI+ YGS SG + A +FD
Sbjct: 139 LEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFD 198
Query: 145 EMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM-QLGDPQVPESTDGVMMLSVISAVSSL 203
EM +RD+ +WS++I + G +AL +F QM ++G + E V M+SVI A + L
Sbjct: 199 EMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANE----VTMVSVICACAHL 254
Query: 204 GALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVF--EEMPHRNVVTWTS 261
GAL G VH YI L LTV L T+LI+MY++CGSI + VF + + + W +
Sbjct: 255 GALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNA 314
Query: 262 LITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEY 321
+I GLA HG RE+L+ F MRE+ + PD + L ACSHGGLV++ W F+S++ E
Sbjct: 315 IIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLK-ES 373
Query: 322 GVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKA 381
G P EHY CMVD+L RAG++ +A F+ +MPIKP + LL C+NH +L LAE
Sbjct: 374 GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETV 433
Query: 382 KERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHE 441
+++ EL PH+DG YV L+N Y +R +M + + K G S++ +D H
Sbjct: 434 GKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHR 493
Query: 442 FVSGDNSHPQWEEIMKFL 459
F++ D +H ++I L
Sbjct: 494 FIAHDKTHFHSDKIYAVL 511
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/561 (29%), Positives = 264/561 (47%), Gaps = 100/561 (17%)
Query: 1 MNRVYNLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTV 60
+N+V LHA +I+ H + L + L + A V + P+ N++
Sbjct: 32 LNQVKQLHAQIIRRNLHED---LHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSL 88
Query: 61 IRHLALHS-PTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX---XXXXGF 116
IR A +S P A +FS M R G+ D+FT+P + G
Sbjct: 89 IRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGL 148
Query: 117 ASNIFVQNALINAYG---------------------------------SSGSLNLAVHLF 143
+S+I+V NALI+ Y +G L A LF
Sbjct: 149 SSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLF 208
Query: 144 DEMPQRDL-------------------------------ASWSTLIVCFTNNGYPAEALS 172
DEMPQRDL SWST+++ ++ G A
Sbjct: 209 DEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARV 268
Query: 173 LFQQMQLGDPQVPEST-----------------------------DGVMMLSVISAVSSL 203
+F +M L V T D ++S+++A +
Sbjct: 269 MFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTES 328
Query: 204 GALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLI 263
G L LG+ +H+ ++R+ LG + AL++MY++CG++ ++ VF ++P +++V+W +++
Sbjct: 329 GLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTML 388
Query: 264 TGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGV 323
GL VHG +EA+ F MR G+RPD + A L +C+H GL+++G F SM Y +
Sbjct: 389 HGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDL 448
Query: 324 YPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKE 383
P +EHYGC+VDLLGR G L EA K V+ MP++PN VIW LLGAC HN++ +A++ +
Sbjct: 449 VPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLD 508
Query: 384 RVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFV 443
+ +LDP G+Y LLSN Y +R+ M+ + K G S V ++ +HEF
Sbjct: 509 NLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFT 568
Query: 444 SGDNSHPQWEEIMKFLVSVVD 464
D SHP+ ++I + L S+++
Sbjct: 569 VFDKSHPKSDQIYQMLGSLIE 589
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 265 bits (677), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 163/509 (32%), Positives = 255/509 (50%), Gaps = 46/509 (9%)
Query: 1 MNRVYNLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTV 60
M + +HA+LIKTG ++ ++ C PS +YA V R +P +NT+
Sbjct: 38 MRELKQIHASLIKTGLISDTVTASRVLAFCCASPS--DMNYAYLVFTRINHKNPFVWNTI 95
Query: 61 IRHLALHS-PTLATTLFSHMHRTGVTV--DHFTFPLIXXXXXXXXXXXXXXX---XXXXX 114
IR + S P +A ++F M + +V T+P +
Sbjct: 96 IRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKE 155
Query: 115 GFASNIFVQNALINAYGSSGSL-------------------------------NLAVHLF 143
G + F++N +++ Y + G L + A +LF
Sbjct: 156 GLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLF 215
Query: 144 DEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSL 203
DEMPQR+ SW+++I F NG +AL +F++MQ D + DG M+S+++A + L
Sbjct: 216 DEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK----PDGFTMVSLLNACAYL 271
Query: 204 GALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLI 263
GA E G W+H YI R L + TALI+MY +CG I+ + VFE P + + W S+I
Sbjct: 272 GASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMI 331
Query: 264 TGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGV 323
GLA +G A+ F ++ +GL PD ++ L AC+H G V F M+ +Y +
Sbjct: 332 LGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMI 391
Query: 324 YPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKE 383
P ++HY MV++LG AG+L EA +++MP++ ++VIW +LL AC ++ +A++A +
Sbjct: 392 EPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAK 451
Query: 384 RVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFV 443
+ +LDP YVLLSNAY R M+E ++ KE G S + +D VHEF+
Sbjct: 452 CLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFI 511
Query: 444 SGDNSHPQWEEIMKFLVSV---VDTIKLG 469
S +HP+ EI L + V TIK G
Sbjct: 512 SCGGTHPKSAEIYSLLDILNWDVSTIKSG 540
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/443 (34%), Positives = 232/443 (52%), Gaps = 7/443 (1%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
S + V N LIN Y ++ A+ +F +P++++ SW+++I N EAL +QM
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
++ + + + + ++A + +GAL G +HA++ R G+GL L AL++MY R
Sbjct: 491 KM-----TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVR 545
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
CG ++ + F ++V +W L+TG + G+ + F M ++ +RPD + +
Sbjct: 546 CGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISL 604
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
L CS +V G F M +YGV P L+HY C+VDLLGRAG L EA KF++ MP+ P
Sbjct: 605 LCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTP 663
Query: 358 NSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRN 417
+ +W LL AC H+ + L E + + + ELD G Y+LL N Y VR
Sbjct: 664 DPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRR 723
Query: 418 SMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSS 477
M+EN + + G S V + VH F+S D HPQ +EI L + + G + S
Sbjct: 724 MMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISES 783
Query: 478 VLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFD 537
D E ++ HSE+ A+AF L+ I V KNL +C +CH +K +S
Sbjct: 784 SSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVR 843
Query: 538 KDIIIRDRNRFHHFSKGSCSCGD 560
++I +RD FHHF G CSCGD
Sbjct: 844 REISVRDAEHFHHFKDGECSCGD 866
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 103/176 (58%), Gaps = 5/176 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GFA +I V N+L Y ++GS A LF M ++D+ SW+T+I + N P +A+ +
Sbjct: 327 GFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY 386
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+ M Q D + + +V+SA ++LG L+ G+ +H +A L V + LINM
Sbjct: 387 RMMD----QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINM 442
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
YS+C ID+++ +F +P +NV++WTS+I GL ++ R EAL R M+ L+P+
Sbjct: 443 YSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPN 497
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 130/255 (50%), Gaps = 8/255 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G+ +I V NALI Y G + A LFD MP+RD+ SW+ +I + NG E L LF
Sbjct: 226 GYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELF 285
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M+ + D + + SVISA LG LG +HAY+ G + + + +L M
Sbjct: 286 FAMR----GLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQM 341
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y GS + K+F M +++V+WT++I+G + +A+ +R M + ++PD
Sbjct: 342 YLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITV 401
Query: 295 TAALVACSHGGLVEDGWRVFE-SMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
A L AC+ G ++ G + + ++++ Y ++ + ++++ + + +A ++
Sbjct: 402 AAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN--LINMYSKCKCIDKALDIFHNI 459
Query: 354 PIKPNSVIWRTLLGA 368
P + N + W +++
Sbjct: 460 P-RKNVISWTSIIAG 473
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 3/178 (1%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
NA + + G+L A ++F +M +R+L SW+ L+ + GY EA+ L+ +M
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
P D V+ + L G VH ++ R G L + + ALI MY +CG +
Sbjct: 193 KP---DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKS 249
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVAC 301
+ +F+ MP R++++W ++I+G +G E L F MR + PD T+ + AC
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
Query: 164 NGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGL 223
NG EA+ L MQ ++ + D + ++++ A E G V++ + L
Sbjct: 72 NGKLEEAMKLLNSMQ----ELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 224 TVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAF-RDM 282
V LG A + M+ R G++ + VF +M RN+ +W L+ G A G EA+ + R +
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 283 REAGLRPDGAAYTAALVACSHGGL 306
G++PD + L C GG+
Sbjct: 188 WVGGVKPDVYTFPCVLRTC--GGI 209
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/361 (38%), Positives = 211/361 (58%), Gaps = 5/361 (1%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N N LIN Y G+L A LF++MP +D+ SW+T+I ++ N EA+++F +M
Sbjct: 965 NEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKM- 1023
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+ + +P D V M +VISA + LG LE+G VH Y + G L V +G+AL++MYS+C
Sbjct: 1024 MEEGIIP---DEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKC 1080
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
GS++R++ VF +P +N+ W S+I GLA HG ++EAL+ F M ++P+ + +
Sbjct: 1081 GSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVF 1140
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
AC+H GLV++G R++ SM +Y + +EHYG MV L +AG++ EA + + +M +PN
Sbjct: 1141 TACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPN 1200
Query: 359 SVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNS 418
+VIW LL C H +LV+AE A ++ L+P + G Y LL + Y +R
Sbjct: 1201 AVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGR 1260
Query: 419 MRENRIVKE-PGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSS 477
MRE I K PG S + ID+ H F + D SH +E+ L + D + L GY T +
Sbjct: 1261 MRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETEN 1320
Query: 478 V 478
V
Sbjct: 1321 V 1321
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 118/313 (37%), Gaps = 74/313 (23%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N I A S L+LAV +M + ++ ++ L F +P +L L+ +M L D
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRM-LRDSV 867
Query: 184 VPESTDGVMMLSVISAVSSLG-ALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSID 242
P S ++ S S G +L+ IW + G G V + T LI+ YS G I
Sbjct: 868 SPSSYTYSSLVKASSFASRFGESLQAHIW------KFGFGFHVKIQTTLIDFYSATGRIR 921
Query: 243 RSVKVFEEMPHRNVVTWTS-------------------------------LITGLAVHGR 271
+ KVF+EMP R+ + WT+ LI G G
Sbjct: 922 EARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGN 981
Query: 272 SREALRAFRDM---------------------REA----------GLRPDGAAYTAALVA 300
+A F M REA G+ PD + + A
Sbjct: 982 LEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISA 1041
Query: 301 CSHGGLVEDGWRVFESMRSEYGVYPMLEHYG-CMVDLLGRAGMLLEAFKFVEDMPIKPNS 359
C+H G++E G V M + + + + G +VD+ + G L A ++P K N
Sbjct: 1042 CAHLGVLEIGKEVH--MYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP-KKNL 1098
Query: 360 VIWRTLLGACVNH 372
W +++ H
Sbjct: 1099 FCWNSIIEGLAAH 1111
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 118/265 (44%), Gaps = 12/265 (4%)
Query: 42 AAAVLLRFPIPDPTPYNTVIRHLALHSP-TLATTLFSHMHRTGVTVDHFTFPLIXXXXX- 99
A ++ + P+ D + T+I+ + + A +F M G+ D T +
Sbjct: 985 AESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAH 1044
Query: 100 --XXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTL 157
GF ++++ +AL++ Y GSL A+ +F +P+++L W+++
Sbjct: 1045 LGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSI 1104
Query: 158 IVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVH-AYI 216
I +G+ EAL +F +M++ + + V +SV +A + G ++ G ++ + I
Sbjct: 1105 IEGLAAHGFAQEALKMFAKMEMESVK----PNAVTFVSVFTACTHAGLVDEGRRIYRSMI 1160
Query: 217 RRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVHGRSREA 275
+ V +++++S+ G I ++++ M N V W +L+ G +H A
Sbjct: 1161 DDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIA 1220
Query: 276 LRAFRDMREAGLRPDGAAYTAALVA 300
AF + L P + Y LV+
Sbjct: 1221 EIAFNKL--MVLEPMNSGYYFLLVS 1243
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 203/340 (59%), Gaps = 4/340 (1%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
+ ++ N+L++ Y G + A LF M + + SW+ +I +T G EA+ F+
Sbjct: 171 YERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFR 230
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMY 235
+MQL + D + ++SV+ + + LG+LELG W+H Y R G + ALI MY
Sbjct: 231 EMQLAGIE----PDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMY 286
Query: 236 SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
S+CG I +++++F +M ++V++W+++I+G A HG + A+ F +M+ A ++P+G +
Sbjct: 287 SKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFL 346
Query: 296 AALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPI 355
L ACSH G+ ++G R F+ MR +Y + P +EHYGC++D+L RAG L A + + MP+
Sbjct: 347 GLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPM 406
Query: 356 KPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXV 415
KP+S IW +LL +C +L +A A + + EL+P G+YVLL+N Y +
Sbjct: 407 KPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRL 466
Query: 416 RNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEI 455
R +R + K PG S++ ++ +V EFVSGDNS P W EI
Sbjct: 467 RKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEI 506
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 141/309 (45%), Gaps = 47/309 (15%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G + + F+ +++ ++ A LF+++ ++ ++++I +T+N + + ++
Sbjct: 37 GLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIY 96
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+Q+ ++P+ M + +SLG+ LG VH ++ + G V ALI+M
Sbjct: 97 KQLLRKSFELPDRFTFPFMFK---SCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDM 153
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSR--------------------- 273
Y + + + KVF+EM R+V++W SL++G A G+ +
Sbjct: 154 YMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMI 213
Query: 274 ----------EALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDG-WRVFESMRSEYG 322
EA+ FR+M+ AG+ PD + + L +C+ G +E G W + R +
Sbjct: 214 SGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGF- 272
Query: 323 VYPMLEHYG---CMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAE 379
L+ G ++++ + G++ +A + M K + + W T++ H + A
Sbjct: 273 ----LKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK-DVISWSTMISGYAYHGN---AH 324
Query: 380 KAKERVNEL 388
A E NE+
Sbjct: 325 GAIETFNEM 333
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 9/209 (4%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF V NALI Y G ++ A+ LF +M +D+ SWST+I + +G A+ F
Sbjct: 271 GFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETF 330
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRA-GLGLTVPLGTALIN 233
+MQ + +G+ L ++SA S +G + G+ +R+ + + LI+
Sbjct: 331 NEMQ----RAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLID 386
Query: 234 MYSRCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRP-DG 291
+ +R G ++R+V++ + MP + + W SL++ G AL A + E L P D
Sbjct: 387 VLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVE--LEPEDM 444
Query: 292 AAYTAALVACSHGGLVEDGWRVFESMRSE 320
Y + G ED R+ + +R+E
Sbjct: 445 GNYVLLANIYADLGKWEDVSRLRKMIRNE 473
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 168/571 (29%), Positives = 278/571 (48%), Gaps = 20/571 (3%)
Query: 7 LHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIR-HLA 65
LH +K G ++ ++ + +L +TA + P+ + +VI +
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTAR---KLFDEMCEPNVVSWTSVISGYND 107
Query: 66 LHSPTLATTLFSHMHRTG-VTVDHFTFPLIXXXXXXXXXXXXXX---XXXXXXGFASNIF 121
+ P A ++F MH V + +TF + G NI
Sbjct: 108 MGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIV 167
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQ--RDLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
V ++L++ YG + A +FD M R++ SW+++I + N EA+ LF+
Sbjct: 168 VSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNA 227
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
+ + M+ SVISA SSLG L+ G H + R G + T+L++MY++CG
Sbjct: 228 A--LTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCG 285
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
S+ + K+F + +V+++TS+I A HG A++ F +M + P+ L
Sbjct: 286 SLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLH 345
Query: 300 ACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPI--KP 357
ACSH GLV +G M +YGV P HY C+VD+LGR G + EA++ + + + +
Sbjct: 346 ACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQ 405
Query: 358 NSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRN 417
+++W LL A H + + +A +R+ + + Y+ LSNAY +R
Sbjct: 406 GALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRL 465
Query: 418 SMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGY------ 471
M+ + VKE S + V+ F +GD S + EI +FL + +K G+
Sbjct: 466 EMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSM 525
Query: 472 APNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKH 531
+SSV D+ EE K+ + H E+LA+A+ LL+ IR++ NLR+C DCH K
Sbjct: 526 ITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKL 585
Query: 532 VSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
+S I +++I++RD NRFH F GSC+C D+W
Sbjct: 586 ISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 261 bits (668), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 135/352 (38%), Positives = 206/352 (58%), Gaps = 5/352 (1%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
++ V NA+I Y G + A+ LFD MP++++ SW+T+I F+ NG +EAL +F M+
Sbjct: 147 DVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCME 206
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
P + + ++SV+ A ++LG LE+G + Y R G + + A I MYS+C
Sbjct: 207 KDKSVKP---NHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKC 263
Query: 239 GSIDRSVKVFEEM-PHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
G ID + ++FEE+ RN+ +W S+I LA HG+ EAL F M G +PD +
Sbjct: 264 GMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGL 323
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
L+AC HGG+V G +F+SM + + P LEHYGCM+DLLGR G L EA+ ++ MP+KP
Sbjct: 324 LLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKP 383
Query: 358 NSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRN 417
++V+W TLLGAC H ++ +AE A E + +L+P + G+ V++SN Y +R
Sbjct: 384 DAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRK 443
Query: 418 SMRENRIVKEPGLS-VVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKL 468
M++ + K G S V + VH+F D SHP+ EI + L + +KL
Sbjct: 444 LMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKL 495
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 97/187 (51%), Gaps = 6/187 (3%)
Query: 187 STDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVK 246
+D ++I+A + LGAL V + + VP+ A+I Y R G + +++
Sbjct: 114 ESDSFCCTTLITAYAKLGALCCARRVFDEMSKR----DVPVWNAMITGYQRRGDMKAAME 169
Query: 247 VFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM-REAGLRPDGAAYTAALVACSHGG 305
+F+ MP +NV +WT++I+G + +G EAL+ F M ++ ++P+ + L AC++ G
Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLG 229
Query: 306 LVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTL 365
+E G R+ E E G + + +++ + GM+ A + E++ + N W ++
Sbjct: 230 ELEIGRRL-EGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSM 288
Query: 366 LGACVNH 372
+G+ H
Sbjct: 289 IGSLATH 295
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 7/159 (4%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEM-PQRDLASWSTLIVCFTNNGYPAEALSL 173
GF NI+V NA I Y G +++A LF+E+ QR+L SW+++I +G EAL+L
Sbjct: 245 GFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTL 304
Query: 174 FQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRA-GLGLTVPLGTALI 232
F QM L + + P D V + ++ A G + G + + + + +I
Sbjct: 305 FAQM-LREGEKP---DAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMI 360
Query: 233 NMYSRCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVHG 270
++ R G + + + + MP + + V W +L+ + HG
Sbjct: 361 DLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHG 399
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/331 (38%), Positives = 198/331 (59%), Gaps = 4/331 (1%)
Query: 125 ALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQV 184
+I+ Y G L+++ LFD+M ++D+ W+ +I +AL+LFQ+MQ + +
Sbjct: 328 TMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTK- 386
Query: 185 PESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRS 244
D + M+ +SA S LGAL++GIW+H YI + L L V LGT+L++MY++CG+I +
Sbjct: 387 ---PDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEA 443
Query: 245 VKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHG 304
+ VF + RN +T+T++I GLA+HG + A+ F +M +AG+ PD + L AC HG
Sbjct: 444 LSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHG 503
Query: 305 GLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRT 364
G+++ G F M+S + + P L+HY MVDLLGRAG+L EA + +E MP++ ++ +W
Sbjct: 504 GMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGA 563
Query: 365 LLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRI 424
LL C H ++ L EKA +++ ELDP G YVLL Y R M E +
Sbjct: 564 LLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGV 623
Query: 425 VKEPGLSVVHIDQVVHEFVSGDNSHPQWEEI 455
K PG S + ++ +V EF+ D S P+ E+I
Sbjct: 624 EKIPGCSSIEVNGIVCEFIVRDKSRPESEKI 654
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 181/421 (42%), Gaps = 48/421 (11%)
Query: 6 NLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLA 65
+ A +I G +P + CA L + Y+ +L P+ +N IR +
Sbjct: 71 QIQAQMIINGLILDPFASSRLIAFCA-LSESRYLDYSVKILKGIENPNIFSWNVTIRGFS 129
Query: 66 -LHSPTLATTLFSHMHRTGVTV---DHFTFPLIXXXXXXXXXXXXXXXX---XXXXGFAS 118
+P + L+ M R G DHFT+P++
Sbjct: 130 ESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLEL 189
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
V NA I+ + S G + A +FDE P RDL SW+ LI + G +A+ +++ M+
Sbjct: 190 VSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLME 249
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+ P D V M+ ++S+ S LG L G + Y++ GL +T+PL AL++M+S+C
Sbjct: 250 -SEGVKP---DDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKC 305
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHG---------------------------- 270
G I + ++F+ + R +V+WT++I+G A G
Sbjct: 306 GDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSV 365
Query: 271 ---RSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPML 327
R ++AL F++M+ + +PD L ACS G ++ G + + +Y + +
Sbjct: 366 QAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE-KYSLSLNV 424
Query: 328 EHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNE 387
+VD+ + G + EA + + NS+ + ++G H D A A NE
Sbjct: 425 ALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGD---ASTAISYFNE 480
Query: 388 L 388
+
Sbjct: 481 M 481
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 5/277 (1%)
Query: 115 GFASNIFVQNALIN--AYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALS 172
G + F + LI A S L+ +V + + ++ SW+ I F+ + P E+
Sbjct: 80 GLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFL 139
Query: 173 LFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALI 232
L++QM L D + + L LG + ++ + L L + A I
Sbjct: 140 LYKQM-LRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASI 198
Query: 233 NMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGA 292
+M++ CG ++ + KVF+E P R++V+W LI G G + +A+ ++ M G++PD
Sbjct: 199 HMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDV 258
Query: 293 AYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVED 352
+ +CS G + G +E ++ E G+ + ++D+ + G + EA + ++
Sbjct: 259 TMIGLVSSCSMLGDLNRGKEFYEYVK-ENGLRMTIPLVNALMDMFSKCGDIHEARRIFDN 317
Query: 353 MPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELD 389
+ K V W T++ L ++ K + + E D
Sbjct: 318 LE-KRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 353
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 214/367 (58%), Gaps = 5/367 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF + + A+I+ Y G +NLA +F+ + +RD+ SW+++I + P+ A+ +F
Sbjct: 471 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIF 530
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+QM + D V + + +SA ++L + G +H ++ + L V + LI+M
Sbjct: 531 RQMGVSGI----CYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 586
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE-AGLRPDGAA 293
Y++CG++ ++ VF+ M +N+V+W S+I HG+ +++L F +M E +G+RPD
Sbjct: 587 YAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQIT 646
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+ + +C H G V++G R F SM +YG+ P EHY C+VDL GRAG L EA++ V+ M
Sbjct: 647 FLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSM 706
Query: 354 PIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXX 413
P P++ +W TLLGAC H ++ LAE A ++ +LDP + G YVL+SNA+
Sbjct: 707 PFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVT 766
Query: 414 XVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAP 473
VR+ M+E + K PG S + I++ H FVSGD +HP+ I L S++ ++L GY P
Sbjct: 767 KVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIP 826
Query: 474 NTSSVLH 480
LH
Sbjct: 827 QPYLPLH 833
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 140/262 (53%), Gaps = 16/262 (6%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
+IF+ +ALI+AY +++A ++F + D+ ++ +I + +NG ++L +F+ +
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+V S + + ++S++ + L AL+LG +H +I + G +G A+I+MY++C
Sbjct: 434 ----KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKC 489
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G ++ + ++FE + R++V+W S+IT A A+ FR M +G+ D + +AAL
Sbjct: 490 GRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAAL 549
Query: 299 VACSH-----GGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
AC++ G G+ + S+ S+ VY ++D+ + G L A + M
Sbjct: 550 SACANLPSESFGKAIHGFMIKHSLASD--VY----SESTLIDMYAKCGNLKAAMNVFKTM 603
Query: 354 PIKPNSVIWRTLLGACVNHNDL 375
K N V W +++ AC NH L
Sbjct: 604 KEK-NIVSWNSIIAACGNHGKL 624
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 8/252 (3%)
Query: 56 PYNTVIRHLALHSP-TLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXX---XXXXXX 111
P+N++I + A + M GV+ D TFP +
Sbjct: 105 PWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTV 164
Query: 112 XXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEAL 171
G N FV ++LI AY G +++ LFD + Q+D W+ ++ + G +
Sbjct: 165 SSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVI 224
Query: 172 SLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTAL 231
F M++ Q+ S + V V+S +S ++LG+ +H + +G+ + +L
Sbjct: 225 KGFSVMRMD--QI--SPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 232 INMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDG 291
++MYS+CG D + K+F M + VTW +I+G G E+L F +M +G+ PD
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 292 AAYTAALVACSH 303
+++ L + S
Sbjct: 341 ITFSSLLPSVSK 352
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 121/264 (45%), Gaps = 28/264 (10%)
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
++N+L++ Y G + A LF M + D +W+ +I + +G E+L+ F +M +
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEM-ISS 334
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSI 241
+P D + S++ +VS LE +H YI R + L + L +ALI+ Y +C +
Sbjct: 335 GVLP---DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGV 391
Query: 242 DRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVAC 301
+ +F + +VV +T++I+G +G ++L FR + + + P+ + L
Sbjct: 392 SMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVI 451
Query: 302 S-----------HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFV 350
HG +++ G+ R G ++D+ + G + A++
Sbjct: 452 GILLALKLGRELHGFIIKKGF----DNRCNIGC--------AVIDMYAKCGRMNLAYEIF 499
Query: 351 EDMPIKPNSVIWRTLLGACVNHND 374
E + K + V W +++ C ++
Sbjct: 500 ERLS-KRDIVSWNSMITRCAQSDN 522
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/281 (19%), Positives = 118/281 (41%), Gaps = 39/281 (13%)
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQR--DLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
+ ++ Y GS + +F + R + W+++I F NG +AL+ + +M
Sbjct: 71 YTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKM- 129
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
L P+ + ++ A+ + ++ ++ + G+ + ++LI Y
Sbjct: 130 LCFGVSPDVSTFPCLVKACVALKNFKGID---FLSDTVSSLGMDCNEFVASSLIKAYLEY 186
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G ID K+F+ + ++ V W ++ G A G ++ F MR + P+ + L
Sbjct: 187 GKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVL 246
Query: 299 VACSHGGLVEDGWRV----------FE--------SMRSEYG-------VYPMLEH---- 329
C+ L++ G ++ FE SM S+ G ++ M+
Sbjct: 247 SVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTV 306
Query: 330 -YGCMVDLLGRAGMLLEAFKFVEDM---PIKPNSVIWRTLL 366
+ CM+ ++G++ E+ F +M + P+++ + +LL
Sbjct: 307 TWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 146/441 (33%), Positives = 236/441 (53%), Gaps = 14/441 (3%)
Query: 27 FLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIR-HLALHSPTLATTLFSHMHRTGVT 85
+R + L A ++A +LL P+ +N + R + + SP + ++S M R G+
Sbjct: 51 LVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIK 110
Query: 86 VDHFTFPLIXXXXXX---XXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHL 142
+ TFP + GF +++V N LI+ YG+ + A +
Sbjct: 111 PNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKV 170
Query: 143 FDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSS 202
FDEM +R++ SW++++ NG F +M +G P+ T V++LS
Sbjct: 171 FDEMTERNVVSWNSIMTALVENGKLNLVFECFCEM-IGKRFCPDETTMVVLLSACG---- 225
Query: 203 LGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSL 262
G L LG VH+ + L L LGTAL++MY++ G ++ + VFE M +NV TW+++
Sbjct: 226 -GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAM 284
Query: 263 ITGLAVHGRSREALRAF-RDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEY 321
I GLA +G + EAL+ F + M+E+ +RP+ + L ACSH GLV+DG++ F M +
Sbjct: 285 IVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIH 344
Query: 322 GVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNH---NDLVLA 378
+ PM+ HYG MVD+LGRAG L EA+ F++ MP +P++V+WRTLL AC H +D +
Sbjct: 345 KIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIG 404
Query: 379 EKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQV 438
EK K+R+ EL+P G+ V+++N + VR M+E ++ K G S + +
Sbjct: 405 EKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGS 464
Query: 439 VHEFVSGDNSHPQWEEIMKFL 459
H F SG + ++ I + L
Sbjct: 465 FHRFFSGYDPRSEYVSIYELL 485
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 258 bits (659), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 157/502 (31%), Positives = 244/502 (48%), Gaps = 77/502 (15%)
Query: 6 NLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLA 65
+HA+++ G +N LS+ + A L YA + P PD + N V+R A
Sbjct: 30 QIHASMVVNGLMSN-LSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA 88
Query: 66 LH-SPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXX---XXXXXGFASNIF 121
P +L++ M + GV+ D +TF + GF N +
Sbjct: 89 QSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEY 148
Query: 122 VQNALI-------------------------------NAYGSSGSLNLAVHLFDEMP--- 147
V+NALI + Y G ++ A+ LFDEMP
Sbjct: 149 VKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKD 208
Query: 148 ----------------------------QRDLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
++D+ +W+ +I + N GYP EAL +F++M+
Sbjct: 209 QVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMR- 267
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRR-----AGLGLTVPLGTALINM 234
E D V +LS++SA + LG LE G +H YI + + + P+ ALI+M
Sbjct: 268 ---DAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDM 324
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y++CGSIDR+++VF + R++ TW +LI GLA+H + ++ F +M+ + P+ +
Sbjct: 325 YAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTF 383
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
++ACSH G V++G + F MR Y + P ++HYGCMVD+LGRAG L EAF FVE M
Sbjct: 384 IGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK 443
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
I+PN+++WRTLLGAC + ++ L + A E++ + GDYVLLSN Y
Sbjct: 444 IEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQK 503
Query: 415 VRNSMRENRIVKEPGLSVVHID 436
VR + R+ K G+S++ D
Sbjct: 504 VRKMFDDTRVKKPTGVSLIEED 525
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 204/351 (58%), Gaps = 5/351 (1%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
++F+ ++L++ YG + A +FDEMP R++ +W+ LI + + + + +F++M
Sbjct: 239 DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEML 298
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
D E T + SV+SA + +GAL G VH Y+ + + + GT LI++Y +C
Sbjct: 299 KSDVAPNEKT----LSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKC 354
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G ++ ++ VFE + +NV TWT++I G A HG +R+A F M + + P+ + A L
Sbjct: 355 GCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVL 414
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
AC+HGGLVE+G R+F SM+ + + P +HY CMVDL GR G+L EA +E MP++P
Sbjct: 415 SACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPT 474
Query: 359 SVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNS 418
+V+W L G+C+ H D L + A RV +L P H G Y LL+N Y VR
Sbjct: 475 NVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQ 534
Query: 419 MRENRIVKEPGLSVVHIDQVVHEFVSGDNSHP-QWEEIMKFLVSVVDTIKL 468
M++ ++VK PG S + + + EF++ D+ P + +++ K L +V ++L
Sbjct: 535 MKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRL 585
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 159/358 (44%), Gaps = 14/358 (3%)
Query: 21 LSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLA---LHSPTLATTLFS 77
L L RC +A YA +L + ++++I H + + L+ +
Sbjct: 36 LFLSRLLRRCC--TAATQFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYR 93
Query: 78 HMHRTGVTVDHFTFP--LIXXXXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGS 135
HM R GV TFP L G S+ FV+N+LI+ Y SSG
Sbjct: 94 HMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGL 153
Query: 136 LNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLS 195
+ A LFD +D+ +W+ +I F NG +EA+ F +M+ E T ++S
Sbjct: 154 FDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMT----VVS 209
Query: 196 VISAVSSLGALELGIWVHA-YIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR 254
V+ A + + G VH Y+ + V +G++L++MY +C D + KVF+EMP R
Sbjct: 210 VLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR 269
Query: 255 NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVF 314
NVVTWT+LI G + + F +M ++ + P+ ++ L AC+H G + G RV
Sbjct: 270 NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVH 329
Query: 315 ESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNH 372
M + ++DL + G L EA E + K N W ++ H
Sbjct: 330 CYMIKN-SIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK-NVYTWTAMINGFAAH 385
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/366 (36%), Positives = 222/366 (60%), Gaps = 22/366 (6%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR-DLASWSTLIVCFTNNGYPAEALSL 173
GF + I +Q +L+ Y S G ++ A +FDE P++ ++ W+ +I +T N EA+ L
Sbjct: 95 GFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIEL 154
Query: 174 FQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELG--IWVHAYIRRAGLGLTVPLGTAL 231
F++M+ ++ DGV++ +SA + LGA+++G I+ + R+ L + + L +L
Sbjct: 155 FKRMEAEKIEL----DGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSL 210
Query: 232 INMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMR------EA 285
+NMY + G +++ K+F+E ++V T+TS+I G A++G+++E+L F+ M+ +
Sbjct: 211 LNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDT 270
Query: 286 GLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLE 345
+ P+ + L+ACSH GLVE+G R F+SM +Y + P H+GCMVDL R+G L +
Sbjct: 271 VITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKD 330
Query: 346 AFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXX 405
A +F+ MPIKPN+VIWRTLLGAC H ++ L E+ + R+ ELD H GDYV LSN Y
Sbjct: 331 AHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYAS 390
Query: 406 XXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSG-DNSHPQW-----EEIMKFL 459
+R+ +R+ R+ PG S + + +++EFVSG DN+ Q E+++ L
Sbjct: 391 KGMWDEKSKMRDRVRKRRM---PGKSWIELGSIINEFVSGPDNNDEQLMMGEISEVLRCL 447
Query: 460 VSVVDT 465
VS + +
Sbjct: 448 VSCMTS 453
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 112/263 (42%), Gaps = 55/263 (20%)
Query: 161 FTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALEL-GIWVHAYIRRA 219
+ +G P +AL F+ Q P D +L I S+ A L G +HA +R+
Sbjct: 38 YLESGEPIKALLDFRHRF---RQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKL 94
Query: 220 GLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVHGRSREALRA 278
G + + T+L+ YS G +D + +VF+E P + N+V WT++I+ + S EA+
Sbjct: 95 GFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIEL 154
Query: 279 FRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVF------------------------ 314
F+ M + DG T AL AC+ G V+ G ++
Sbjct: 155 FKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMY 214
Query: 315 --------------ESMRSEYGVY-PMLEHYGCMVDLLGRAGMLLEAFKFV------EDM 353
ESMR + Y M+ Y L G+A LE FK + +D
Sbjct: 215 VKSGETEKARKLFDESMRKDVTTYTSMIFGYA----LNGQAQESLELFKKMKTIDQSQDT 270
Query: 354 PIKPNSVIWRTLLGACVNHNDLV 376
I PN V + +L AC +H+ LV
Sbjct: 271 VITPNDVTFIGVLMAC-SHSGLV 292
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/452 (32%), Positives = 240/452 (53%), Gaps = 31/452 (6%)
Query: 1 MNRVYNLHATLIKTG--QHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYN 58
+ + +HA +I G H PLS + L S SYA ++L + P P YN
Sbjct: 22 LQNLKQIHAQIITIGLSHHTYPLS------KLLHLSSTVCLSYALSILRQIPNPSVFLYN 75
Query: 59 TVIRHL-ALHSPT---LATTLFSHM---HRTGVTVDHFTFPLIXXXXXXXXX------XX 105
T+I + + H+ T LA +L+ + V + FT+P +
Sbjct: 76 TLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRAL 135
Query: 106 XXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNN- 164
+ FVQ AL+ Y + G L A LF+ + + DLA+W+TL+ + N+
Sbjct: 136 HAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSE 195
Query: 165 --GYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLG 222
E L LF +MQ+ ++ ++++I + ++LG G+W H Y+ + L
Sbjct: 196 EIDSDEEVLLLFMRMQVRPNELS-------LVALIKSCANLGEFVRGVWAHVYVLKNNLT 248
Query: 223 LTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM 282
L +GT+LI++YS+CG + + KVF+EM R+V + ++I GLAVHG +E + ++ +
Sbjct: 249 LNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
Query: 283 REAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGM 342
GL PD A + + ACSH GLV++G ++F SM++ YG+ P +EHYGC+VDLLGR+G
Sbjct: 309 ISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGR 368
Query: 343 LLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNA 402
L EA + ++ MP+KPN+ +WR+ LG+ H D E A + + L+ + G+YVLLSN
Sbjct: 369 LEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNI 428
Query: 403 YXXXXXXXXXXXVRNSMRENRIVKEPGLSVVH 434
Y R M+++R+ K PG+S ++
Sbjct: 429 YAGVNRWTDVEKTRELMKDHRVNKSPGISTLN 460
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 231/447 (51%), Gaps = 31/447 (6%)
Query: 120 IFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
+ V N+L++AY SS ++ A ++ M +RD ++++L+ F G ALS+ M
Sbjct: 462 MVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYM-Y 520
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
GD D + + ISA ++LGALE G +H Y ++G + +L++MYS+CG
Sbjct: 521 GDGI---RMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCG 577
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
S++ + KVFEE+ +VV+W L++GLA +G AL AF +MR PD + L
Sbjct: 578 SLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLS 637
Query: 300 ACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNS 359
ACS+G L + G F+ M+ Y + P +EHY +V +LGRAG L EA VE M +KPN+
Sbjct: 638 ACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNA 697
Query: 360 VIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSM 419
+I++TLL AC +L L E + L P Y+LL++ Y RN M
Sbjct: 698 MIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLM 757
Query: 420 RENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVL 479
E R+ K+ G S V + VH FVS D V+ VD G YA +
Sbjct: 758 TEKRLSKKLGKSTVEVQGKVHSFVSED-------------VTRVDKTN-GIYAE-----I 798
Query: 480 HDIQEEEKE--------HSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKH 531
I+EE K + +HS K AV + +Y + V+KN +C DCH F+
Sbjct: 799 ESIKEEIKRFGSPYRGNENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSI 858
Query: 532 VSGIFDKDIIIRDRNRFHHFSKGSCSC 558
++ + DK I +RD N+ H F G CSC
Sbjct: 859 LTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 136/306 (44%), Gaps = 13/306 (4%)
Query: 72 ATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXX---XXXXXGFASNIFVQNALIN 128
A +LF M +G + FTF + GF N V ++L +
Sbjct: 108 ALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSD 167
Query: 129 AYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM-QLGDPQVPES 187
Y G A LF + D SW+ +I EAL + +M + G P P
Sbjct: 168 LYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVP--PNE 225
Query: 188 TDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKV 247
V +L SS LE G +H+ I G+ L V L T+L++ YS+ ++ +V+V
Sbjct: 226 FTFVKLL----GASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRV 281
Query: 248 FEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLV 307
++V WTS+++G + R++EA+ F +MR GL+P+ Y+A L CS +
Sbjct: 282 LNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSL 341
Query: 308 EDGWRVFESMRSEYGVYPMLEHYGCMVDLLGR-AGMLLEAFKFVEDMPIKPNSVIWRTLL 366
+ G ++ S + G + +VD+ + + +EA + M + PN V W TL+
Sbjct: 342 DFGKQI-HSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM-VSPNVVSWTTLI 399
Query: 367 GACVNH 372
V+H
Sbjct: 400 LGLVDH 405
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 99/192 (51%), Gaps = 4/192 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G N+ + N L++ Y + + A LFDEM R + +W+ +I FT + A ALSLF
Sbjct: 53 GLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLF 112
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
++M E T SV+ + + L + G VH + + G +G++L ++
Sbjct: 113 EEMMASGTHPNEFT----FSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDL 168
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
YS+CG + ++F + + + ++WT +I+ L + REAL+ + +M +AG+ P+ +
Sbjct: 169 YSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTF 228
Query: 295 TAALVACSHGGL 306
L A S GL
Sbjct: 229 VKLLGASSFLGL 240
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 138/293 (47%), Gaps = 17/293 (5%)
Query: 115 GFASNIFVQNALINAY-GSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSL 173
GF + V NAL++ Y S S A +F M ++ SW+TLI+ ++G+ + L
Sbjct: 355 GFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGL 414
Query: 174 FQQM--QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTAL 231
+M + +P V V + V+ A S L + + +HAY+ R + + +G +L
Sbjct: 415 LMEMVKREVEPNV------VTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSL 468
Query: 232 INMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDG 291
++ Y+ +D + V M R+ +T+TSL+T G+ AL M G+R D
Sbjct: 469 VDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQ 528
Query: 292 AAYTAALVACSHGGLVEDGWRV-FESMRSEY-GVYPMLEHYGCMVDLLGRAGMLLEAFKF 349
+ + A ++ G +E G + S++S + G +L +VD+ + G L +A K
Sbjct: 529 LSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNS---LVDMYSKCGSLEDAKKV 585
Query: 350 VEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKE--RVNELDPHHDGDYVLLS 400
E++ P+ V W L+ ++ + A A E R+ E +P +LLS
Sbjct: 586 FEEIAT-PDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLS 637
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 33/194 (17%)
Query: 208 LGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLA 267
+G+ +H + + GL + L L+++Y + I + K+F+EM HR V WT +I+
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFT 100
Query: 268 VHGRSREALRAFRDMREAGLRPDGAAYTAALVACS-----------HGGLVEDGWR---- 312
AL F +M +G P+ +++ + +C+ HG +++ G+
Sbjct: 101 KSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV 160
Query: 313 VFESMRSEYG----------VYPMLEH-----YGCMVDLLGRAGMLLEAFKFVEDM---P 354
V S+ Y ++ L++ + M+ L A EA +F +M
Sbjct: 161 VGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG 220
Query: 355 IKPNSVIWRTLLGA 368
+ PN + LLGA
Sbjct: 221 VPPNEFTFVKLLGA 234
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 199/342 (58%), Gaps = 4/342 (1%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
++ N ++ Y + G + +FD+MP+R++ SW+ LI + NG +E L F++M
Sbjct: 120 DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV 179
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLG-LTVPLGTALINMYSR 237
VP D M L V+SA + LGA + G WVH Y G + V + ALI+MY +
Sbjct: 180 DEGSVVP--NDATMTL-VLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGK 236
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
CG+I+ +++VF+ + R++++W ++I GLA HG EAL F +M+ +G+ PD +
Sbjct: 237 CGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGV 296
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
L AC H GLVEDG F SM +++ + P +EH GC+VDLL RAG L +A +F+ MP+K
Sbjct: 297 LCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKA 356
Query: 358 NSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRN 417
++VIW TLLGA + + + E A E + +L+P + ++V+LSN Y ++
Sbjct: 357 DAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKV 416
Query: 418 SMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFL 459
+MR+ KE G+S + D + +F S HP+ EE+ + L
Sbjct: 417 AMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRIL 458
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 146/454 (32%), Positives = 241/454 (53%), Gaps = 10/454 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWST--LIVCFTNNGYPAEALS 172
G A N +Q AL++ + A +FD+ P +S +T +I + NG P +A+S
Sbjct: 447 GTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVS 506
Query: 173 LFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALI 232
LF + L + ++ D V + +++ +LG E+G +H Y +AG + LG +LI
Sbjct: 507 LFHR-TLCEQKL--FLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLI 563
Query: 233 NMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGA 292
+MY++C D ++K+F M +V++W SLI+ + EAL + M E ++PD
Sbjct: 564 SMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDII 623
Query: 293 AYTAALVAC--SHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFV 350
T + A + + +F SM++ Y + P EHY V +LG G+L EA +
Sbjct: 624 TLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTI 683
Query: 351 EDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXX 410
MP++P + R LL +C H++ +A++ + + P +Y+L SN Y
Sbjct: 684 NSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWH 743
Query: 411 XXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFL-VSVVDTIKLG 469
+R MRE K P S + + +H F + D SHPQ ++I + L + +++ +K+G
Sbjct: 744 RSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVG 803
Query: 470 GYAPNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDR-KAIRVIKNLRICYDCHSF 528
Y PNT VL ++ E K+ L +HS KLAV + +L R K +RV+KN+ +C DCH F
Sbjct: 804 -YEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEF 862
Query: 529 MKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
K++S + ++I++RD + FHHF G CSC D W
Sbjct: 863 FKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 39/228 (17%)
Query: 115 GFASNIFVQNALINAYG--SSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALS 172
GF +++FV N+L++ Y S S + + LFDE+PQRD+ASW+T++ G +A
Sbjct: 211 GFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFD 270
Query: 173 LFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALI 232
LF +M + D + +++S+ + L G +H R GL + + ALI
Sbjct: 271 LFYEMNRVEGF---GVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALI 327
Query: 233 NMYSR-------------------------------CGSIDRSVKVFEEMPHRNVVTWTS 261
YS+ G +D +V++F + +N +T+ +
Sbjct: 328 GFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNA 387
Query: 262 LITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVED 309
L+ G +G +AL+ F DM + G+ + T+A+ AC GLV +
Sbjct: 388 LMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC---GLVSE 432
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 6/190 (3%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
NALI+ Y G A+ +F + + S++ LI F+ EAL +F +M+
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR--CGSI 241
P V +L+ VS LGI +H I ++G +V + +L+++Y + S
Sbjct: 178 QPNEYTFVAILTACVRVSRFS---LGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSC 234
Query: 242 DRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM-REAGLRPDGAAYTAALVA 300
D +K+F+E+P R+V +W ++++ L G+S +A F +M R G D + L +
Sbjct: 235 DDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSS 294
Query: 301 CSHGGLVEDG 310
C+ ++ G
Sbjct: 295 CTDSSVLLRG 304
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 15/195 (7%)
Query: 126 LINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM-QLGDPQV 184
+I AY S G ++ AV +F + +++ +++ L+ F NG+ +AL LF M Q G
Sbjct: 357 MITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRG---- 412
Query: 185 PESTDGVMMLSVISAVSSLGAL---ELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSI 241
E TD S+ SAV + G + ++ +H + + G + TAL++M +RC +
Sbjct: 413 VELTD----FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERM 468
Query: 242 DRSVKVFEEMPHR--NVVTWTSLITGLAVHGRSREALRAF-RDMREAGLRPDGAAYTAAL 298
+ ++F++ P + TS+I G A +G +A+ F R + E L D + T L
Sbjct: 469 ADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLIL 528
Query: 299 VACSHGGLVEDGWRV 313
C G E G+++
Sbjct: 529 AVCGTLGFREMGYQI 543
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 195/347 (56%), Gaps = 10/347 (2%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N+ + ++I+ Y + S A +F +M +R++ SW+ LI +T NG EALSLF ++
Sbjct: 319 NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 378
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLT------VPLGTALI 232
+ P +++ A + L L LG+ H ++ + G + +G +LI
Sbjct: 379 R-ESVCPTHYS---FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLI 434
Query: 233 NMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGA 292
+MY +CG ++ VF +M R+ V+W ++I G A +G EAL FR+M E+G +PD
Sbjct: 435 DMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHI 494
Query: 293 AYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVED 352
L AC H G VE+G F SM ++GV P+ +HY CMVDLLGRAG L EA +E+
Sbjct: 495 TMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEE 554
Query: 353 MPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXX 412
MP++P+SVIW +LL AC H ++ L + E++ E++P + G YVLLSN Y
Sbjct: 555 MPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDV 614
Query: 413 XXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFL 459
VR SMR+ + K+PG S + I H F+ D SHP+ ++I L
Sbjct: 615 MNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLL 661
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 137/269 (50%), Gaps = 27/269 (10%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF++ IF+QN LI+AY GSL +FD+MPQR++ +W++++ T G+ EA SLF
Sbjct: 50 GFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLF 109
Query: 175 QQMQLGDPQVPES----------------------TDGVMM-----LSVISAVSSLGALE 207
+ M D S +G ++ SV+SA S L +
Sbjct: 110 RSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMN 169
Query: 208 LGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLA 267
G+ VH+ I ++ V +G+AL++MYS+CG+++ + +VF+EM RNVV+W SLIT
Sbjct: 170 KGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFE 229
Query: 268 VHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPML 327
+G + EAL F+ M E+ + PD + + AC+ ++ G V + + +
Sbjct: 230 QNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDI 289
Query: 328 EHYGCMVDLLGRAGMLLEAFKFVEDMPIK 356
VD+ + + EA + MPI+
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 167/361 (46%), Gaps = 27/361 (7%)
Query: 42 AAAVLLRFPIPDPTPYNTVIRHLALHSPTL-ATTLFSHMHRTGVTVDHFTFPLIXXXXXX 100
A ++ P D +N+++ A H A F+ MH+ G ++ ++F +
Sbjct: 105 ADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSG 164
Query: 101 XXXXXXXXXXXXXXG---FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTL 157
F S++++ +AL++ Y G++N A +FDEM R++ SW++L
Sbjct: 165 LNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSL 224
Query: 158 IVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHA-YI 216
I CF NG EAL +F QM L P D V + SVISA +SL A+++G VH +
Sbjct: 225 ITCFEQNGPAVEALDVF-QMMLESRVEP---DEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 217 RRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREAL 276
+ L + L A ++MY++C I + +F+ MP RNV+ TS+I+G A+ ++ A
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 277 RAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSE------YGVYPMLEHY 330
F M E + ++ A + + G E+ +F ++ E Y +L+
Sbjct: 341 LMFTKMAERNV----VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Query: 331 GCMVDL-LGRAG---MLLEAFKFV---EDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKE 383
+ +L LG +L FKF ED NS+I + CV LV K E
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVF-RKMME 455
Query: 384 R 384
R
Sbjct: 456 R 456
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G +IFV N+LI+ Y G + +F +M +RD SW+ +I+ F NGY EAL LF
Sbjct: 422 GEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELF 481
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGI-WVHAYIRRAGLGLTVPLGTALIN 233
++M + E D + M+ V+SA G +E G + + R G+ T +++
Sbjct: 482 REML----ESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVD 537
Query: 234 MYSRCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVH 269
+ R G ++ + + EEMP + + V W SL+ VH
Sbjct: 538 LLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 105/264 (39%), Gaps = 80/264 (30%)
Query: 211 WVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGL---- 266
+VHA + ++G + + LI+ YS+CGS++ +VF++MP RN+ TW S++TGL
Sbjct: 41 YVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLG 100
Query: 267 ---------------------------AVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
A H R EAL F M + G + ++ + L
Sbjct: 101 FLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 300 AC-----------------------------------SHGGLVEDGWRVFESMR-----S 319
AC S G V D RVF+ M S
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 320 EYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAE 379
+ E G V+ L M+LE+ ++P+ V +++ AC + + + + +
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLES-------RVEPDEVTLASVISACASLSAIKVGQ 273
Query: 380 KAKERVNELDPHHDGDYVLLSNAY 403
+ RV + D + ++LSNA+
Sbjct: 274 EVHGRVVKNDKLRND--IILSNAF 295
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 248 bits (633), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 140/374 (37%), Positives = 194/374 (51%), Gaps = 10/374 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF ++F AL++ Y +G L A FD + +RD+A W++LI + N EAL L+
Sbjct: 352 GFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILY 411
Query: 175 QQMQLGD--PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALI 232
++M+ P P M SV+ A SSL LELG VH + + G GL VP+G+AL
Sbjct: 412 RRMKTAGIIPNDP------TMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALS 465
Query: 233 NMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGA 292
MYS+CGS++ VF P+++VV+W ++I+GL+ +G+ EAL F +M G+ PD
Sbjct: 466 TMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDV 525
Query: 293 AYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVED 352
+ + ACSH G VE GW F M + G+ P ++HY CMVDLL RAG L EA +F+E
Sbjct: 526 TFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIES 585
Query: 353 MPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXX 412
I +WR LL AC NH L A E++ L YV LS Y
Sbjct: 586 ANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDV 645
Query: 413 XXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYA 472
V MR N + KE G S + + H FV GD HP EE + V + G+
Sbjct: 646 ERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFV 705
Query: 473 PNTSSVLHDIQEEE 486
S ++EEE
Sbjct: 706 TVLDSSF--VEEEE 717
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 177/380 (46%), Gaps = 24/380 (6%)
Query: 7 LHATLIKTG-----QHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVI 61
+H +I+TG QH N L F+ +C +L A S A++ + D +N++I
Sbjct: 36 VHGQIIRTGASTCIQHANVLV--NFYAKCGKLAKAH--SIFNAIICK----DVVSWNSLI 87
Query: 62 ----RHLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXXXXXGFA 117
++ + S LF M + + +T I
Sbjct: 88 TGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKM 147
Query: 118 S---NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
S +I+V +L+ Y +G + + +F MP+R+ +WST++ + G EA+ +F
Sbjct: 148 SSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF 207
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+ L + + +D V +V+S++++ + LG +H + GL V L AL+ M
Sbjct: 208 N-LFLREKEEGSDSDYVFT-AVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTM 265
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
YS+C S++ + K+F+ RN +TW++++TG + +G S EA++ F M AG++P
Sbjct: 266 YSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTI 325
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
L ACS +E+G + S + G L +VD+ +AG L +A K D
Sbjct: 326 VGVLNACSDICYLEEG-KQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGF-DCL 383
Query: 355 IKPNSVIWRTLLGACVNHND 374
+ + +W +L+ V ++D
Sbjct: 384 QERDVALWTSLISGYVQNSD 403
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 105/199 (52%), Gaps = 4/199 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G + + NAL+ Y SLN A +FD R+ +WS ++ ++ NG EA+ LF
Sbjct: 251 GLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLF 310
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+M + E T ++ V++A S + LE G +H+++ + G + TAL++M
Sbjct: 311 SRMFSAGIKPSEYT----IVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDM 366
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y++ G + + K F+ + R+V WTSLI+G + + EAL +R M+ AG+ P+
Sbjct: 367 YAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTM 426
Query: 295 TAALVACSHGGLVEDGWRV 313
+ L ACS +E G +V
Sbjct: 427 ASVLKACSSLATLELGKQV 445
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 18/200 (9%)
Query: 209 GIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAV 268
G VH I R G + L+N Y++CG + ++ +F + ++VV+W SLITG +
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 269 HG---RSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYP 325
+G S ++ FR+MR + P+ AYT A + + L R + +
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPN--AYTLAGIFKAESSLQSS-----TVGRQAHALVV 145
Query: 326 MLEHYG------CMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAE 379
+ +G +V + +AG++ + K MP + N+ W T++ + A
Sbjct: 146 KMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSGYATRGRVEEAI 204
Query: 380 KAKER-VNELDPHHDGDYVL 398
K + E + D DYV
Sbjct: 205 KVFNLFLREKEEGSDSDYVF 224
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 207/397 (52%), Gaps = 12/397 (3%)
Query: 41 YAAAVLLRFPIPDPTPYNTVIRHLALH-SPTLATTLFSHMHRTGVTVDHFTFPLIXXXXX 99
+ + +L ++PI +N ++R H SP A ++ M R+ V D ++ P++
Sbjct: 71 FRSRILDQYPIA--FLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAV 128
Query: 100 XX---XXXXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWST 156
GF + F ++ I Y +G A +FDE P+R L SW+
Sbjct: 129 QIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNA 188
Query: 157 LIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYI 216
+I + G EA+ +F M+ + D M+SV ++ LG L L +H +
Sbjct: 189 IIGGLNHAGRANEAVEMFVDMKRSGLE----PDDFTMVSVTASCGGLGDLSLAFQLHKCV 244
Query: 217 RRAGL--GLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSRE 274
+A + + +LI+MY +CG +D + +FEEM RNVV+W+S+I G A +G + E
Sbjct: 245 LQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLE 304
Query: 275 ALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMV 334
AL FR MRE G+RP+ + L AC HGGLVE+G F M+SE+ + P L HYGC+V
Sbjct: 305 ALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIV 364
Query: 335 DLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDG 394
DLL R G L EA K VE+MP+KPN ++W L+G C D+ +AE + EL+P +DG
Sbjct: 365 DLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDG 424
Query: 395 DYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLS 431
YV+L+N Y VR M+ ++ K P S
Sbjct: 425 VYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/343 (37%), Positives = 187/343 (54%), Gaps = 4/343 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GFA N +++ L+ Y SG L A LF + RDL W+ +I + G E L ++
Sbjct: 138 GFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIY 197
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M+ + VP D SV A S+L LE G HA + + + + + +AL++M
Sbjct: 198 YDMR-QNRIVP---DQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDM 253
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y +C S +VF+++ RNV+TWTSLI+G HG+ E L+ F M+E G RP+ +
Sbjct: 254 YFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTF 313
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
L AC+HGGLV+ GW F SM+ +YG+ P +HY MVD LGRAG L EA++FV P
Sbjct: 314 LVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSP 373
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
K + +W +LLGAC H ++ L E A + ELDP + G+YV+ +N Y
Sbjct: 374 CKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASK 433
Query: 415 VRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMK 457
VR M + K+PG S + + VH F+ D SH E+I K
Sbjct: 434 VRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYK 476
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 42/205 (20%)
Query: 209 GIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAV 268
G +HA + G L L L+ +Y+ G + + +F + R+++ W ++I+G
Sbjct: 127 GKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQ 186
Query: 269 HGRSREALRAFRDMREAGLRPDGAAYTAALVACS------HG------------------ 304
G +E L + DMR+ + PD + + ACS HG
Sbjct: 187 KGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIV 246
Query: 305 --GLVE---------DGWRVFE--SMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVE 351
LV+ DG RVF+ S R+ ++ YG G+ +L+ F+ ++
Sbjct: 247 DSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYG----YHGKVSEVLKCFEKMK 302
Query: 352 DMPIKPNSVIWRTLLGACVNHNDLV 376
+ +PN V + +L AC NH LV
Sbjct: 303 EEGCRPNPVTFLVVLTAC-NHGGLV 326
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/467 (31%), Positives = 234/467 (50%), Gaps = 45/467 (9%)
Query: 40 SYAAAVLLRFPIPDPTPYNTVIRHLALHSPTLATTLFSH----MHRTGVTVDHFTFPLIX 95
SYA + RF P+ Y V+ + P A++ FS ++R+ +HF +PL+
Sbjct: 74 SYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVL 133
Query: 96 XXX---XXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSS------------------- 133
GF + VQ AL+++Y SS
Sbjct: 134 KSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNV 193
Query: 134 -------------GSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLG 180
G ++ AV LF++MP+RD+ SW+ ++ T NG EA+SLF++M +
Sbjct: 194 VSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRM-IN 252
Query: 181 DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGS 240
+P + + V ++ V+SA + G L+L +HA+ R L V + +L+++Y +CG+
Sbjct: 253 EPSI--RPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGN 310
Query: 241 IDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGL---RPDGAAYTAA 297
++ + VF+ +++ W S+I A+HGRS EA+ F +M + + +PD +
Sbjct: 311 LEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGL 370
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
L AC+HGGLV G F+ M + +G+ P +EHYGC++DLLGRAG EA + + M +K
Sbjct: 371 LNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKA 430
Query: 358 NSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRN 417
+ IW +LL AC H L LAE A + + L+P++ G +++N Y R
Sbjct: 431 DEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARK 490
Query: 418 SMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVD 464
++ K PG S + ID VH+F S D SHP+ EEI L S++
Sbjct: 491 MIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLIS 537
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/462 (30%), Positives = 241/462 (52%), Gaps = 18/462 (3%)
Query: 6 NLHATLIKTGQHNNPL---SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIR 62
+H IK+ N + SL + RC L SA V + PD +N +I
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARR------VFDQIERPDTASWNVIIA 344
Query: 63 HLALHS-PTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXXXXX---GFAS 118
LA + A ++FS M +G D + + GF +
Sbjct: 345 GLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLA 404
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQR-DLASWSTLIVCFTNNGYPAEALSLFQQM 177
++ V N+L+ Y L +LF++ D SW+T++ + P E L LF+ M
Sbjct: 405 DLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLM 464
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
+ + + D + M +++ + +L+LG VH Y + GL + LI+MY++
Sbjct: 465 LVSECE----PDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAK 520
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
CGS+ ++ ++F+ M +R+VV+W++LI G A G EAL F++M+ AG+ P+ +
Sbjct: 521 CGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGV 580
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
L ACSH GLVE+G +++ +M++E+G+ P EH C+VDLL RAG L EA +F+++M ++P
Sbjct: 581 LTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEP 640
Query: 358 NSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRN 417
+ V+W+TLL AC ++ LA+KA E + ++DP + +VLL + + +R+
Sbjct: 641 DVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRS 700
Query: 418 SMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFL 459
SM+++ + K PG S + I+ +H F + D HP+ ++I L
Sbjct: 701 SMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVL 742
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 134/279 (48%), Gaps = 8/279 (2%)
Query: 117 ASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQ 176
+S++ QNALI Y ++ A +F +P +DL SWS++I F+ G+ EALS ++
Sbjct: 200 SSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKE 259
Query: 177 M-QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMY 235
M G E G S + A SSL + G +H ++ L G +L +MY
Sbjct: 260 MLSFGVFHPNEYIFG----SSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMY 315
Query: 236 SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
+RCG ++ + +VF+++ + +W +I GLA +G + EA+ F MR +G PD +
Sbjct: 316 ARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLR 375
Query: 296 AALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPI 355
+ L A + + G ++ S ++G L ++ + L F ED
Sbjct: 376 SLLCAQTKPMALSQGMQI-HSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRN 434
Query: 356 KPNSVIWRTLLGACVNHNDLVLAEKAKE--RVNELDPHH 392
+SV W T+L AC+ H V + + V+E +P H
Sbjct: 435 NADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDH 473
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 132/257 (51%), Gaps = 11/257 (4%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
+ + N +++ YG GSL A +FD MP+R+L S++++I ++ NG AEA+ L+ +M
Sbjct: 101 DTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKM- 159
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
L + VP D S+I A +S + LG +HA + + + ALI MY R
Sbjct: 160 LQEDLVP---DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRF 216
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGL-RPDGAAYTAA 297
+ + +VF +P +++++W+S+I G + G EAL ++M G+ P+ + ++
Sbjct: 217 NQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSS 276
Query: 298 LVACSHGGLVEDGWRVFE-SMRSEYGVYPMLEHYGC-MVDLLGRAGMLLEAFKFVEDMPI 355
L ACS + G ++ ++SE + GC + D+ R G L A + V D
Sbjct: 277 LKACSSLLRPDYGSQIHGLCIKSELAGNAIA---GCSLCDMYARCGFLNSA-RRVFDQIE 332
Query: 356 KPNSVIWRTLLGACVNH 372
+P++ W ++ N+
Sbjct: 333 RPDTASWNVIIAGLANN 349
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 66/109 (60%)
Query: 194 LSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPH 253
+S+I A SS +L G +H +I + L +++MY +CGS+ + +VF+ MP
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPE 130
Query: 254 RNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACS 302
RN+V++TS+ITG + +G+ EA+R + M + L PD A+ + + AC+
Sbjct: 131 RNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACA 179
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/452 (32%), Positives = 233/452 (51%), Gaps = 17/452 (3%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMP-----QRDLASWSTLIVCFTNNGYPAEALSL 173
NI N +I+ Y +G A+ LF M QR+ A+W+ +I + NG EAL L
Sbjct: 452 NIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALEL 511
Query: 174 FQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALIN 233
F++MQ +P S V +LS++ A ++L ++ +H + R L + AL +
Sbjct: 512 FRKMQFSRF-MPNS---VTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTD 567
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
Y++ G I+ S +F M ++++TW SLI G +HG AL F M+ G+ P+
Sbjct: 568 TYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGT 627
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
++ ++A G V++G +VF S+ ++Y + P LEH MV L GRA L EA +F+++M
Sbjct: 628 LSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEM 687
Query: 354 PIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXX 413
I+ + IW + L C H D+ +A A E + L+P + ++S Y
Sbjct: 688 NIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSL 747
Query: 414 XVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTI-KLGGYA 472
R+N + K G S + + ++H F +GD S + L +V+ + +L +
Sbjct: 748 EGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQS----KLCTDVLYPLVEKMSRLDNRS 803
Query: 473 PNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHR--DRKAIRVIKNLRICYDCHSFMK 530
+ L I+EE +E + G HSEK A+AF L+ + IR++KNLR+C DCH K
Sbjct: 804 DQYNGELW-IEEEGREETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAK 862
Query: 531 HVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
+VS + DI++ D HHF G CSC D+W
Sbjct: 863 YVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 127/264 (48%), Gaps = 11/264 (4%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQ----RDLASWSTLIVCFTNNGYPAEA 170
G + + N LI Y G + A+ L +M D+ +W+ +I +NG +A
Sbjct: 277 GISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQA 336
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
L +F++M L VP + V ++S +SA S L + G VH+ + G V +G +
Sbjct: 337 LDMFRKMFLAGV-VP---NAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS 392
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
L++MYS+CG ++ + KVF+ + +++V TW S+ITG G +A F M++A LRP+
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPN 452
Query: 291 GAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLL---GRAGMLLEAF 347
+ + G + +F+ M + V + ++ G+ LE F
Sbjct: 453 IITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELF 512
Query: 348 KFVEDMPIKPNSVIWRTLLGACVN 371
+ ++ PNSV +LL AC N
Sbjct: 513 RKMQFSRFMPNSVTILSLLPACAN 536
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 122/254 (48%), Gaps = 8/254 (3%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
++FV+ L++ Y G + A +FD M +R+L +WS +I ++ E LF+ M
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM- 172
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+ D +P D + ++ ++ G +E G +H+ + + G+ + + +++ +Y++C
Sbjct: 173 MKDGVLP---DDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKC 229
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G +D + K F M R+V+ W S++ +G+ EA+ ++M + G+ P + +
Sbjct: 230 GELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILI 289
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM---PI 355
+ G + + + M + +G+ + + M+ L GM +A M +
Sbjct: 290 GGYNQLGKCDAAMDLMQKMET-FGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGV 348
Query: 356 KPNSVIWRTLLGAC 369
PN+V + + AC
Sbjct: 349 VPNAVTIMSAVSAC 362
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 134/344 (38%), Gaps = 87/344 (25%)
Query: 75 LFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXX---XXXXXXGFASNIFVQNALINAYG 131
LF M + GV D F FP I G +S + V N+++ Y
Sbjct: 168 LFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 132 SSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGV 191
G L+ A F M +RD+ +W+++++ + NG EA+ L ++M+
Sbjct: 228 KCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEME------------- 274
Query: 192 MMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEM 251
+ G+ + LI Y++ G D ++ + ++M
Sbjct: 275 --------------------------KEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM 308
Query: 252 P----HRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVAC------ 301
+V TWT++I+GL +G +AL FR M AG+ P+ +A+ AC
Sbjct: 309 ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVI 368
Query: 302 -----------------------------SHGGLVEDGWRVFESMRSE--YGVYPMLEHY 330
S G +ED +VF+S++++ Y M+ Y
Sbjct: 369 NQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGY 428
Query: 331 GCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHND 374
C G+A E F ++D ++PN + W T++ + + D
Sbjct: 429 -CQAGYCGKA---YELFTRMQDANLRPNIITWNTMISGYIKNGD 468
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 110/224 (49%), Gaps = 22/224 (9%)
Query: 172 SLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVP---LG 228
SLFQQ +V ST L ++ + G++ LG +HA R GL T P +
Sbjct: 71 SLFQQ----GSKVKRST----YLKLLESCIDSGSIHLGRILHA---RFGL-FTEPDVFVE 118
Query: 229 TALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLR 288
T L++MY++CG I + KVF+ M RN+ TW+++I + R RE + FR M + G+
Sbjct: 119 TKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVL 178
Query: 289 PDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFK 348
PD + L C++ G VE G +V S+ + G+ L ++ + + G L A K
Sbjct: 179 PDDFLFPKILQGCANCGDVEAG-KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATK 237
Query: 349 FVEDMPIKPNSVIWRT-LLGACVNHNDLVLAEKAKERVNELDPH 391
F M + + + W + LL C N E+A E V E++
Sbjct: 238 FFRRMR-ERDVIAWNSVLLAYCQNGKH----EEAVELVKEMEKE 276
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 238 bits (607), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 200/369 (54%), Gaps = 7/369 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF SN+ V N++++ Y G L+ A H F EM +DL +W+TLI + +EAL +F
Sbjct: 243 GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSD-SSEALLMF 301
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
Q+ + VP + S+++A +++ AL G +H I R G V L ALI+M
Sbjct: 302 QRFE-SQGFVP---NCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDM 357
Query: 235 YSRCGSIDRSVKVFEEM-PHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
Y++CG+I S +VF E+ RN+V+WTS++ G HG EA+ F M +G+RPD
Sbjct: 358 YAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIV 417
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+ A L AC H GLVE G + F M SEYG+ P + Y C+VDLLGRAG + EA++ VE M
Sbjct: 418 FMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERM 477
Query: 354 PIKPNSVIWRTLLGACVNHN-DLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXX 412
P KP+ W +LGAC H + +++ A +V EL P G YV+LS Y
Sbjct: 478 PFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDF 537
Query: 413 XXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYA 472
VR MR KE G+S + ++ V F D P + L +++ + GY
Sbjct: 538 ARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYV 597
Query: 473 PNTSSVLHD 481
P S+++D
Sbjct: 598 PELDSLVND 606
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 129/257 (50%), Gaps = 15/257 (5%)
Query: 115 GFASNIFVQNALINAYGS-SGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSL 173
G +++V NA++N Y + S ++ A +F ++ ++ +W+TLI FT+ G L +
Sbjct: 141 GMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKM 200
Query: 174 FQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALIN 233
++QM L + +V + + A +S+ ++ G +HA + + G +P+ ++++
Sbjct: 201 YKQMLLENAEVTPYCITI----AVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILD 256
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
+Y RCG + + F EM ++++TW +LI+ L S EAL F+ G P+
Sbjct: 257 LYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE-RSDSSEALLMFQRFESQGFVPNCYT 315
Query: 294 YTAALVACSHGGLVEDGW----RVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKF 349
+T+ + AC++ + G R+F G +E ++D+ + G + ++ +
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIFRR-----GFNKNVELANALIDMYAKCGNIPDSQRV 370
Query: 350 VEDMPIKPNSVIWRTLL 366
++ + N V W +++
Sbjct: 371 FGEIVDRRNLVSWTSMM 387
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 115/242 (47%), Gaps = 7/242 (2%)
Query: 126 LINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVP 185
LI +Y G + A LFDEMP RD+ +W+ +I + ++ Y A A F +M
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPN 110
Query: 186 ESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG-SIDRS 244
E T + SV+ + ++ L G VH + + G+ ++ + A++NMY+ C +++ +
Sbjct: 111 EFT----LSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 245 VKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHG 304
+F ++ +N VTWT+LITG G L+ ++ M T A+ A +
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
Query: 305 GLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRT 364
V G ++ S+ G L ++DL R G L EA + +M K + + W T
Sbjct: 227 DSVTTGKQIHASVIKR-GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK-DLITWNT 284
Query: 365 LL 366
L+
Sbjct: 285 LI 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
Query: 227 LGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAG 286
L T LI Y G ++ + +F+EMP R+VV WT++ITG A + A F +M + G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
P+ ++ L +C + ++ G V + + G+ L M+++ + +EA
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALV-HGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 347 FKFV-EDMPIKPNSVIWRTLL 366
+ D+ +K N V W TL+
Sbjct: 166 ACLIFRDIKVK-NDVTWTTLI 185
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/318 (40%), Positives = 177/318 (55%), Gaps = 7/318 (2%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM- 177
N+ + +LI+ Y G L A +LFD MP+R L SW+++I ++ NG EAL +F M
Sbjct: 250 NVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML 309
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
LG + D V LSVI A G +LG +HAY+ + G + AL+NMY++
Sbjct: 310 DLGI-----APDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAK 364
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAG-LRPDGAAYTA 296
G + + K FE++ ++ + WT +I GLA HG EAL F+ M+E G PDG Y
Sbjct: 365 TGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLG 424
Query: 297 ALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIK 356
L ACSH GLVE+G R F MR +G+ P +EHYGCMVD+L RAG EA + V+ MP+K
Sbjct: 425 VLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVK 484
Query: 357 PNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVR 416
PN IW LL C H +L L ++ + V E + G YVLLSN Y +R
Sbjct: 485 PNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIR 544
Query: 417 NSMRENRIVKEPGLSVVH 434
SM+ R+ K G S V
Sbjct: 545 ESMKSKRVDKVLGHSSVE 562
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 183/397 (46%), Gaps = 22/397 (5%)
Query: 6 NLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLA 65
LH +IK+ N + L C P SYA +V P +N++IR +
Sbjct: 24 QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYS 83
Query: 66 LH-SPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX---XXXXGFASNIF 121
+P A + M R G + D+FTFP + GF N++
Sbjct: 84 NSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMY 143
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
V L++ Y G +N + +F+++PQ ++ +W +LI F NN ++A+ F++MQ
Sbjct: 144 VSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNG 203
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAG--------LGLTVPLGTALIN 233
+ E+ +M+ ++ A + G W H +++ G +G V L T+LI+
Sbjct: 204 VKANET----IMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLID 259
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
MY++CG + + +F+ MP R +V+W S+ITG + +G + EAL F DM + G+ PD
Sbjct: 260 MYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVT 319
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+ + + A G + G + + S+ G +V++ + G A K ED+
Sbjct: 320 FLSVIRASMIQGCSQLGQSI-HAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDL 378
Query: 354 PIKPNSVIWRTLLGACVNH----NDLVLAEKAKERVN 386
K +++ W ++ +H L + ++ +E+ N
Sbjct: 379 E-KKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGN 414
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 84/157 (53%), Gaps = 5/157 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF + + AL+N Y +G A F+++ ++D +W+ +I+ ++G+ EALS+F
Sbjct: 347 GFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIF 406
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRA-GLGLTVPLGTALIN 233
Q+MQ P DG+ L V+ A S +G +E G A +R GL TV +++
Sbjct: 407 QRMQEKGNATP---DGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVD 463
Query: 234 MYSRCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVH 269
+ SR G + + ++ + MP + NV W +L+ G +H
Sbjct: 464 ILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIH 500
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/454 (32%), Positives = 238/454 (52%), Gaps = 33/454 (7%)
Query: 6 NLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLL--RFPIPDPTPYNTVIRH 63
+HA L+ G H+N L + C++ PS +++S A +L+ RF PD +NT+++
Sbjct: 26 QIHAQLVINGCHDNSLFGKLIGHYCSK-PSTESSSKLAHLLVFPRFGHPDKFLFNTLLK- 83
Query: 64 LALHSPTLATTLFSHMHRTG--VTVDHFTFPLIXXXXXXXXXXXXXXXXXXXXGFASNI- 120
P + +F++ + ++ TF + G +
Sbjct: 84 --CSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLG 141
Query: 121 ------FVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTN-----NGYPAE 169
+ L++ Y +G L A +FDEMP+R +W+ +I + + N +
Sbjct: 142 FLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARK 201
Query: 170 ALSLFQQMQL-GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLG--LTVP 226
A+ LF++ G P T M+ V+SA+S G LE+G VH YI + G + V
Sbjct: 202 AMVLFRRFSCCGSGVRPTDTT---MVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVF 258
Query: 227 LGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAG 286
+GTAL++MYS+CG ++ + VFE M +NV TWTS+ TGLA++GR E M E+G
Sbjct: 259 IGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESG 318
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
++P+ +T+ L A H GLVE+G +F+SM++ +GV P++EHYGC+VDLLG+AG + EA
Sbjct: 319 IKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEA 378
Query: 347 FKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDG-------DYVLL 399
++F+ MPIKP++++ R+L AC + + V+ E+ + + E++ + DYV L
Sbjct: 379 YQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVAL 438
Query: 400 SNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVV 433
SN +R M+E RI PG S V
Sbjct: 439 SNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/347 (37%), Positives = 195/347 (56%), Gaps = 6/347 (1%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEAL-SLFQQMQLGDP 182
N ++ + G + A +FD+MP+RDL SW++L+ ++ G + LF +M + +
Sbjct: 304 NTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEK 363
Query: 183 QVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSID 242
P D V M+S+IS ++ G L G WVH + R L L +ALI+MY +CG I+
Sbjct: 364 VKP---DRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIE 420
Query: 243 RSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACS 302
R+ VF+ ++V WTS+ITGLA HG ++AL+ F M+E G+ P+ A L ACS
Sbjct: 421 RAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACS 480
Query: 303 HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVE-DMPIKPNSVI 361
H GLVE+G VF M+ ++G P EHYG +VDLL RAG + EA V+ MP++P+ +
Sbjct: 481 HSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSM 540
Query: 362 WRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRE 421
W ++L AC D+ AE A + +L+P +G YVLLSN Y R +M
Sbjct: 541 WGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMEN 600
Query: 422 NRIVKEPGLSVVHIDQVVHEFVSGD-NSHPQWEEIMKFLVSVVDTIK 467
+ K G S V + +H FV+ + +HP+W EI + L + + +K
Sbjct: 601 RGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 165/398 (41%), Gaps = 59/398 (14%)
Query: 20 PLSLRTFFLRCAELPSADTASYAAAVLLRF-PIPDPTPYNTVIRHLALHSPTLATTLFSH 78
P+S FF + + + A + L F P P+ YNT+I ++ S L+S
Sbjct: 68 PMSRLIFF---SAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVS-SSKNECFGLYSS 123
Query: 79 MHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXXXXXGFAS-NIFVQNALINAYGSSGSLN 137
M R V+ D TF + G S ++ N+L+ Y G+
Sbjct: 124 MIRHRVSPDRQTFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFG 183
Query: 138 LAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVI 197
+A +F MP D++S++ +IV + G+ EAL L+ +M + D P D +LS++
Sbjct: 184 VAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKM-VSDGIEP---DEYTVLSLL 239
Query: 198 SAVSSLGALELGIWVHAYIRRAG--LGLTVPLGTALINMYSRC----------------- 238
L + LG VH +I R G + L AL++MY +C
Sbjct: 240 VCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKD 299
Query: 239 --------------GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRA-FRDMR 283
G ++ + VF++MP R++V+W SL+ G + G + +R F +M
Sbjct: 300 MRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMT 359
Query: 284 -EAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYG------CMVDL 336
++PD + + ++ G + G R +G+ L+ G ++D+
Sbjct: 360 IVEKVKPDRVTMVSLISGAANNGELSHG-------RWVHGLVIRLQLKGDAFLSSALIDM 412
Query: 337 LGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHND 374
+ G++ AF V + + +W +++ H +
Sbjct: 413 YCKCGIIERAF-MVFKTATEKDVALWTSMITGLAFHGN 449
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
+ F+ +ALI+ Y G + A +F ++D+A W+++I +G +AL LF +MQ
Sbjct: 402 DAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQ 461
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIR-RAGLGLTVPLGTALINMYSR 237
+ + + V +L+V++A S G +E G+ V +++ + G +L+++ R
Sbjct: 462 ----EEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCR 517
Query: 238 CGSIDRSVKVFE-EMPHR-NVVTWTSLITG 265
G ++ + + + +MP R + W S+++
Sbjct: 518 AGRVEEAKDIVQKKMPMRPSQSMWGSILSA 547
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/470 (30%), Positives = 235/470 (50%), Gaps = 19/470 (4%)
Query: 1 MNRVYNLHATLIKTGQHNNPLSLRTFFLRCAELPSADT-ASYAAAVLLRFPIPDPTPYNT 59
+ ++ + H+ I G H N ++ LP+ + YA+++ IP+ Y+T
Sbjct: 24 VKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDT 83
Query: 60 VIRHLALHS-PTLATTLFSHM---HRTGVTVDHFTFPLIXXXXXXXXXXXXXXX----XX 111
+IR + S P L F M +T + TF +
Sbjct: 84 MIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVV 143
Query: 112 XXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEAL 171
F S+ VQ ++ Y L A +FDE+PQ D+ W L+ + G +E L
Sbjct: 144 KNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGL 203
Query: 172 SLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRA-GLGLTVPLGTA 230
+F++M + + D + + ++A + +GAL G W+H ++++ + V +GTA
Sbjct: 204 EVFKEMLVRGIE----PDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTA 259
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAF-RDMREAGLRP 289
L++MY++CG I+ +V+VFE++ RNV +W +LI G A +G +++A R RE G++P
Sbjct: 260 LVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKP 319
Query: 290 DGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKF 349
D L AC+HGG +E+G + E+M + YG+ P EHY C+VDL+ RAG L +A
Sbjct: 320 DSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDL 379
Query: 350 VEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDP----HHDGDYVLLSNAYXX 405
+E MP+KP + +W LL C H ++ L E A + + +L+ + V LSN Y
Sbjct: 380 IEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFS 439
Query: 406 XXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEI 455
VR + + I K PG S++ +D +V +FVSGD SHP +I
Sbjct: 440 VQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQI 489
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 193/353 (54%), Gaps = 5/353 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G +IF +ALI+ Y + L + +FDEM +DL W+++ + EAL+LF
Sbjct: 484 GLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLF 543
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
++QL E D ++++A +L +++LG H + + GL + AL++M
Sbjct: 544 LELQLS----RERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDM 599
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y++CGS + + K F+ R+VV W S+I+ A HG ++AL+ M G+ P+ +
Sbjct: 600 YAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITF 659
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
L ACSH GLVEDG + FE M +G+ P EHY CMV LLGRAG L +A + +E MP
Sbjct: 660 VGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMP 718
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
KP +++WR+LL C ++ LAE A E DP G + +LSN Y
Sbjct: 719 TKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKK 778
Query: 415 VRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIK 467
VR M+ +VKEPG S + I++ VH F+S D SH + +I + L ++ I+
Sbjct: 779 VRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 110/188 (58%), Gaps = 4/188 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF +++V LI+ Y G+++ A +FD +P++ +W+T+I G +L LF
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
Q+ + D VP DG ++ +V+SA S L LE G +HA+I R GL + L LI+
Sbjct: 238 YQL-MEDNVVP---DGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDS 293
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y +CG + + K+F MP++N+++WT+L++G + +EA+ F M + GL+PD A
Sbjct: 294 YVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYAC 353
Query: 295 TAALVACS 302
++ L +C+
Sbjct: 354 SSILTSCA 361
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 131/256 (51%), Gaps = 11/256 (4%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G + ++ N LIN Y +G + A +F++MP+R+L SWST++ ++G E+L +F
Sbjct: 74 GLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVF 133
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIW----VHAYIRRAGLGLTVPLGTA 230
+ P + ++ S I A S L G W + +++ ++G V +GT
Sbjct: 134 LEFWRTRKDSP---NEYILSSFIQACSGLDGR--GRWMVFQLQSFLVKSGFDRDVYVGTL 188
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
LI+ Y + G+ID + VF+ +P ++ VTWT++I+G GRS +L+ F + E + PD
Sbjct: 189 LIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPD 248
Query: 291 GAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFV 350
G + L ACS +E G ++ + YG+ ++D + G ++ A K
Sbjct: 249 GYILSTVLSACSILPFLEGGKQIHAHIL-RYGLEMDASLMNVLIDSYVKCGRVIAAHKLF 307
Query: 351 EDMPIKPNSVIWRTLL 366
MP K N + W TLL
Sbjct: 308 NGMPNK-NIISWTTLL 322
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 11/264 (4%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G + + N LI++Y G + A LF+ MP +++ SW+TL+ + N EA+ LF
Sbjct: 279 GLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELF 338
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M + D S++++ +SL AL G VHAY +A LG + +LI+M
Sbjct: 339 TSM----SKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDM 394
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITG---LAVHGRSREALRAFRDMREAGLRPDG 291
Y++C + + KVF+ +VV + ++I G L EAL FRDMR +RP
Sbjct: 395 YAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSL 454
Query: 292 AAYTAALVACSHGGLVEDGW-RVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFV 350
+ + L A + L G + + +YG+ + ++D+ L ++
Sbjct: 455 LTFVSLLRASA--SLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVF 512
Query: 351 EDMPIKPNSVIWRTLLGACVNHND 374
++M +K + VIW ++ V ++
Sbjct: 513 DEMKVK-DLVIWNSMFAGYVQQSE 535
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 123/259 (47%), Gaps = 13/259 (5%)
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAE---ALSLFQQM 177
+V N+LI+ Y L A +FD D+ ++ +I ++ G E AL++F+ M
Sbjct: 386 YVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDM 445
Query: 178 Q--LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMY 235
+ L P + + +S++ A +SL +L L +H + + GL L + G+ALI++Y
Sbjct: 446 RFRLIRPSL------LTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVY 499
Query: 236 SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
S C + S VF+EM +++V W S+ G + EAL F +++ + RPD +
Sbjct: 500 SNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFA 559
Query: 296 AALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPI 355
+ A + V+ G + F + G+ ++D+ + G +A K D
Sbjct: 560 NMVTAAGNLASVQLG-QEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAF-DSAA 617
Query: 356 KPNSVIWRTLLGACVNHND 374
+ V W +++ + NH +
Sbjct: 618 SRDVVCWNSVISSYANHGE 636
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 7/164 (4%)
Query: 212 VHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGR 271
VH I GL L L LIN+YSR G + + KVFE+MP RN+V+W+++++ HG
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 272 SREALRAFRDM-REAGLRPDGAAYTAALVACSHGGLVEDG-WRVF--ESMRSEYGVYPML 327
E+L F + R P+ ++ + ACS GL G W VF +S + G +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 328 EHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVN 371
++D + G + A + +P K ++V W T++ CV
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEK-STVTWTTMISGCVK 226
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 182/345 (52%), Gaps = 4/345 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G ++ V N+++ Y + G+L A LF M RD+ SWST+I + G+ E F
Sbjct: 340 GLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYF 399
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M+ Q + S++S ++ +E G VHA GL + ++LINM
Sbjct: 400 SWMR----QSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINM 455
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
YS+CGSI + +F E ++V+ T++I G A HG+S+EA+ F + G RPD +
Sbjct: 456 YSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTF 515
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
+ L AC+H G ++ G+ F M+ Y + P EHYGCMVDLL RAG L +A K + +M
Sbjct: 516 ISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMS 575
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
K + V+W TLL AC D+ +A ER+ ELDP V L+N Y
Sbjct: 576 WKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAAN 635
Query: 415 VRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFL 459
VR +M+ ++KEPG S + I V FVSGD HPQ E+I L
Sbjct: 636 VRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNIL 680
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 125 ALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQV 184
+LINA G+L A +FD+MP D+ SW+++I + EAL LF M++ D V
Sbjct: 49 SLINA----GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAV 104
Query: 185 PESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRS 244
S D ++ V+ A + G +HAY + L +V +G++L++MY R G ID+S
Sbjct: 105 --SPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKS 162
Query: 245 VKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVAC--- 301
+VF EMP RN VTWT++ITGL GR +E L F +M + D + AL AC
Sbjct: 163 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222
Query: 302 --------------------------------SHGGLVEDGWRVFESM--RSEYGVYPML 327
+ G ++DG +FE+M R ++
Sbjct: 223 RQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI 282
Query: 328 EHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEK 380
Y +G+ +E F + + + PN + ++ AC + + LV E+
Sbjct: 283 VAY----KRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQ 331
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 131/276 (47%), Gaps = 8/276 (2%)
Query: 74 TLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX---XXXXGFASNIFVQNALINAY 130
T FS M R+ D +TF + GF + + V N+L Y
Sbjct: 195 TYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMY 254
Query: 131 GSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDG 190
G + + LF+ M +RD+ SW++LIV + G +A+ F +M+ + QVP +
Sbjct: 255 TECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMR--NSQVPPNEQ- 311
Query: 191 VMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEE 250
S+ SA +SL L G +H + GL ++ + +++ MYS CG++ + +F+
Sbjct: 312 -TFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQG 370
Query: 251 MPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDG 310
M R++++W+++I G G E + F MR++G +P A A+L++ S V +G
Sbjct: 371 MRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFAL-ASLLSVSGNMAVIEG 429
Query: 311 WRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
R ++ +G+ ++++ + G + EA
Sbjct: 430 GRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 151/346 (43%), Gaps = 20/346 (5%)
Query: 33 LPSADTASYAAAVLLRFPIPDPTPYNTVI-RHLALHSPTLATTLFSHMHRTGVTVDHFTF 91
L +A A V + P D + ++I R++ ++ A LFS M VDH
Sbjct: 50 LINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMR----VVDHAVS 105
Query: 92 P---LIXXXXXXXXXXXXXXXXXXXXGFA------SNIFVQNALINAYGSSGSLNLAVHL 142
P ++ +A S+++V ++L++ Y G ++ + +
Sbjct: 106 PDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRV 165
Query: 143 FDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSS 202
F EMP R+ +W+ +I + G E L+ F +M + E +D + A +
Sbjct: 166 FSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSE----ELSDTYTFAIALKACAG 221
Query: 203 LGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSL 262
L ++ G +H ++ G T+ + +L MY+ CG + + +FE M R+VV+WTSL
Sbjct: 222 LRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSL 281
Query: 263 ITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYG 322
I G+ +A+ F MR + + P+ + + AC+ + G ++ ++ S G
Sbjct: 282 IVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLS-LG 340
Query: 323 VYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGA 368
+ L M+ + G L+ A + M + + + W T++G
Sbjct: 341 LNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCR-DIISWSTIIGG 385
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 145/485 (29%), Positives = 222/485 (45%), Gaps = 56/485 (11%)
Query: 1 MNRVYNLHATLIKTGQHNNPLSLRTFF---------LRCAELPSADTASYAAAVLLRFPI 51
+ ++ HA I +G+ +N + F + + S + SYA +V
Sbjct: 17 LKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRFITN 76
Query: 52 PDPTPYNTVIRHLALHSPTLATT--LFSHMHRTGVTVDHFTFPLIXXXXXXX-----XXX 104
P +NT+IR LH P+ ++ F M R V D TFP +
Sbjct: 77 PSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLV 136
Query: 105 XXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQ---------------- 148
G S++F N LI Y ++ A+ LFDE PQ
Sbjct: 137 KTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKA 196
Query: 149 ---------------RDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMM 193
RDL SW++LI + + EA+ LF +M + D V +
Sbjct: 197 REIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEM----VALGLKPDNVAI 252
Query: 194 LSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPH 253
+S +SA + G + G +H Y +R L + L T L++ Y++CG ID ++++FE
Sbjct: 253 VSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSD 312
Query: 254 RNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRV 313
+ + TW ++ITGLA+HG + FR M +G++PDG + + LV CSH GLV++ +
Sbjct: 313 KTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNL 372
Query: 314 FESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPI----KPNSVIWRTLLGAC 369
F+ MRS Y V ++HYGCM DLLGRAG++ EA + +E MP + + W LLG C
Sbjct: 373 FDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGC 432
Query: 370 VNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSM-RENRIVKEP 428
H ++ +AEKA RV L P G Y ++ Y VR + R+ ++ K
Sbjct: 433 RIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNV 492
Query: 429 GLSVV 433
G S V
Sbjct: 493 GFSKV 497
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 178/306 (58%), Gaps = 3/306 (0%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N+ N +I+ Y ++G + A +FD MP RD+ SW+ ++ + + G E L +F +M
Sbjct: 236 NVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKM- 294
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
L D E DG ++SV+SA +SLG+L G WVH YI + G+ + L TAL++MYS+C
Sbjct: 295 LDDS--TEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKC 352
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G ID++++VF R+V TW S+I+ L+VHG ++AL F +M G +P+G + L
Sbjct: 353 GKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVL 412
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
AC+H G+++ ++FE M S Y V P +EHYGCMVDLLGR G + EA + V ++P
Sbjct: 413 SACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEA 472
Query: 359 SVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNS 418
S++ +LLGAC L AE+ R+ EL+ Y +SN Y R +
Sbjct: 473 SILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRN 532
Query: 419 MRENRI 424
MR R+
Sbjct: 533 MRAERV 538
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 132/317 (41%), Gaps = 49/317 (15%)
Query: 1 MNRVYNLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTV 60
+ + HA ++KTG ++ S A P T SYA ++L R P+ +N+V
Sbjct: 52 LTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSV 111
Query: 61 IRHLALHS-PTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX---XXXXGF 116
IR A S P +A T+F M V D ++F + G
Sbjct: 112 IRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGL 171
Query: 117 ASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQ 176
+++FV+N L+N YG SG +A + D MP RD SW++L+ + G EA +LF +
Sbjct: 172 VTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDE 231
Query: 177 MQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYS 236
M+ + + W +I+ Y+
Sbjct: 232 MEERNVES--------------------------W-----------------NFMISGYA 248
Query: 237 RCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM-REAGLRPDGAAYT 295
G + + +VF+ MP R+VV+W +++T A G E L F M ++ +PDG
Sbjct: 249 AAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLV 308
Query: 296 AALVAC-SHGGLVEDGW 311
+ L AC S G L + W
Sbjct: 309 SVLSACASLGSLSQGEW 325
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 21/231 (9%)
Query: 155 STLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHA 214
+++I + N+ P AL++F++M LG P P D V+ A ++ E G +H
Sbjct: 109 NSVIRAYANSSTPEVALTVFREMLLG-PVFP---DKYSFTFVLKACAAFCGFEEGRQIHG 164
Query: 215 YIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSRE 274
++GL V + L+N+Y R G + + KV + MP R+ V+W SL++ G E
Sbjct: 165 LFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDE 224
Query: 275 ALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMR-----SEYGVYPMLEH 329
A F +M E + ++ + + GLV++ VF+SM S + H
Sbjct: 225 ARALFDEMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAH 280
Query: 330 YGCMVDLLGRAGMLLEAF-KFVEDMPIKPNSVIWRTLLGACVNHNDLVLAE 379
GC + +LE F K ++D KP+ ++L AC + L E
Sbjct: 281 VGCYNE-------VLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGE 324
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 231 bits (589), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 123/313 (39%), Positives = 187/313 (59%), Gaps = 5/313 (1%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
NALI+ Y L+ A+ +F E+ ++D SW+++I + EA+ LF MQ
Sbjct: 243 NALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGI 302
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
P DG ++ SV+SA +SLGA++ G WVH YI AG+ +GTA+++MY++CG I+
Sbjct: 303 KP---DGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIET 359
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSH 303
++++F + +NV TW +L+ GLA+HG E+LR F +M + G +P+ + AAL AC H
Sbjct: 360 ALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCH 419
Query: 304 GGLVEDGWRVFESMRS-EYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIW 362
GLV++G R F M+S EY ++P LEHYGCM+DLL RAG+L EA + V+ MP+KP+ I
Sbjct: 420 TGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRIC 479
Query: 363 RTLLGACVNHNDLV-LAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRE 421
+L AC N L+ L ++ + +++ G YVLLSN + +R M+
Sbjct: 480 GAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKV 539
Query: 422 NRIVKEPGLSVVH 434
I K PG S +
Sbjct: 540 KGISKVPGSSYIE 552
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 165/346 (47%), Gaps = 17/346 (4%)
Query: 35 SADTASYAAAVLLRF-PIPDPTPYNTVIRHLAL-HSPTLATTLFSHMHRTGVTVDHFTFP 92
SAD ASY++ +L + YNT++ A+ P + + G + D FTFP
Sbjct: 51 SADFASYSSVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFP 110
Query: 93 LIXXXXXXXXXXXXXXXX---XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR 149
+ GF +I+VQN+L++ YG G A +F EMP R
Sbjct: 111 PVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVR 170
Query: 150 DLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELG 209
D+ SW+ +I FT G EAL F +M + +P + + V+ + +G L LG
Sbjct: 171 DVVSWTGIITGFTRTGLYKEALDTFSKMDV-EPNLAT------YVCVLVSSGRVGCLSLG 223
Query: 210 IWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVH 269
+H I + +++ G ALI+MY +C + +++VF E+ ++ V+W S+I+GL
Sbjct: 224 KGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHC 283
Query: 270 GRSREALRAFRDMR-EAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLE 328
RS+EA+ F M+ +G++PDG T+ L AC+ G V+ G V E + + +
Sbjct: 284 ERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWD--T 341
Query: 329 HYG-CMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHN 373
H G +VD+ + G + A + + K N W LLG H
Sbjct: 342 HIGTAIVDMYAKCGYIETALEIFNGIRSK-NVFTWNALLGGLAIHG 386
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/324 (36%), Positives = 181/324 (55%), Gaps = 3/324 (0%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
++ +I+ Y G ++ A LFD+MP RD+ ++++++ + N Y EAL +F M+
Sbjct: 282 DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDME 341
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+P+ T V+ V+ A++ LG L I +H YI L LG ALI+MYS+C
Sbjct: 342 KESHLLPDDTTLVI---VLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKC 398
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
GSI ++ VFE + ++++ W ++I GLA+HG A + L+PD + L
Sbjct: 399 GSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVL 458
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
ACSH GLV++G FE MR ++ + P L+HYGCMVD+L R+G + A +E+MP++PN
Sbjct: 459 NACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPN 518
Query: 359 SVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNS 418
VIWRT L AC +H + E + + ++ YVLLSN Y VR
Sbjct: 519 DVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTM 578
Query: 419 MRENRIVKEPGLSVVHIDQVVHEF 442
M+E +I K PG S + +D VHEF
Sbjct: 579 MKERKIEKIPGCSWIELDGRVHEF 602
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 185/466 (39%), Gaps = 83/466 (17%)
Query: 2 NRVYNLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRF--------PIPD 53
+ V +H LIKTG N L A A +A V + + D
Sbjct: 26 DDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVED 85
Query: 54 PTPYNTVIR-HLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX-- 110
P +N VI+ H P A L M GV+VD F+ L+
Sbjct: 86 PFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHG 145
Query: 111 -XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAE 169
G S++F+QN LI Y G L L+ +FD MP+RD S++++I + G
Sbjct: 146 FLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVS 205
Query: 170 ALSLFQQMQLGDPQV----------PESTDGVMMLSVISA------VSSLGALELGIWVH 213
A LF M + + +++DGV + S + A + S ++ G H
Sbjct: 206 ARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKH 265
Query: 214 AYIRRA-GLGLTVP-----LGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLA 267
I A GL +P +I+ Y++ G + + +F++MPHR+VV + S++ G
Sbjct: 266 GRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYV 325
Query: 268 VHGRSREALRAFRDM-REAGLRPDGAAYTAALVAC------------------------- 301
+ EAL F DM +E+ L PD L A
Sbjct: 326 QNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGG 385
Query: 302 ----------SHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKF-- 349
S G ++ VFE + ++ ++H+ M+ L G+ AF
Sbjct: 386 KLGVALIDMYSKCGSIQHAMLVFEGIENKS-----IDHWNAMIGGLAIHGLGESAFDMLL 440
Query: 350 -VEDMPIKPNSVIWRTLLGACVNHNDLV----LAEKAKERVNELDP 390
+E + +KP+ + + +L AC +H+ LV L + R ++++P
Sbjct: 441 QIERLSLKPDDITFVGVLNAC-SHSGLVKEGLLCFELMRRKHKIEP 485
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 233/470 (49%), Gaps = 19/470 (4%)
Query: 1 MNRVYNLHATLIKTGQHNNPLSLRTFFLRCAELPSADT-ASYAAAVLLRFPIPDPTPYNT 59
+ ++ + H+ I G H N ++ LP+ + YA+++ IP+ Y+T
Sbjct: 24 VKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDT 83
Query: 60 VIRHLALHS-PTLATTLFSHM---HRTGVTVDHFTFPLIXXXXXXXXXXXXXXX----XX 111
+IR + S P L F M + + TF +
Sbjct: 84 MIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVV 143
Query: 112 XXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEAL 171
F S+ VQ ++ Y L A +FDE+PQ D+ W L+ + G +E L
Sbjct: 144 KNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGL 203
Query: 172 SLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAG-LGLTVPLGTA 230
+F++M + + D + + ++A + +GAL G W+H ++++ + V +GTA
Sbjct: 204 EVFREMLVKGLE----PDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTA 259
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM-REAGLRP 289
L++MY++CG I+ +V+VF+++ RNV +W +LI G A +G +++A+ + RE G++P
Sbjct: 260 LVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKP 319
Query: 290 DGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKF 349
D L AC+HGG +E+G + E+M + Y + P EHY C+VDL+ RAG L +A
Sbjct: 320 DSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNL 379
Query: 350 VEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDP----HHDGDYVLLSNAYXX 405
+E MP+KP + +W LL C H ++ L E A + + +L+ + V LSN Y
Sbjct: 380 IEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFS 439
Query: 406 XXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEI 455
VR + + + K PG SV+ +D V +FVSGD SHP +I
Sbjct: 440 VQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQI 489
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/432 (33%), Positives = 216/432 (50%), Gaps = 10/432 (2%)
Query: 42 AAAVLLRFPIPDPTPYNTVIRHLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXX 101
A V P N +I + ++ A LF M GV TF I
Sbjct: 583 ARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKP 642
Query: 102 XXXXXXXX---XXXXXGFASN-IFVQNALINAYGSSGSLNLAVHLFDEMPQ-RDLASWST 156
GF+S ++ +L+ Y +S + A LF E+ + + W+
Sbjct: 643 ESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTG 702
Query: 157 LIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYI 216
++ + NG+ EAL +++M+ D +P+ V +L V S +SSL G +H+ I
Sbjct: 703 MMSGHSQNGFYEEALKFYKEMR-HDGVLPDQATFVTVLRVCSVLSSL---REGRAIHSLI 758
Query: 217 RRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVHGRSREA 275
L LI+MY++CG + S +VF+EM R NVV+W SLI G A +G + +A
Sbjct: 759 FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDA 818
Query: 276 LRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVD 335
L+ F MR++ + PD + L ACSH G V DG ++FE M +YG+ ++H CMVD
Sbjct: 819 LKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVD 878
Query: 336 LLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGD 395
LLGR G L EA F+E +KP++ +W +LLGAC H D + E + E++ EL+P +
Sbjct: 879 LLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSA 938
Query: 396 YVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEI 455
YVLLSN Y +R MR+ + K PG S + ++Q H F +GD SH + +I
Sbjct: 939 YVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKI 998
Query: 456 MKFLVSVVDTIK 467
FL + D +K
Sbjct: 999 EMFLEDLYDLMK 1010
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 134/269 (49%), Gaps = 6/269 (2%)
Query: 126 LINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVP 185
+IN Y G L A LF EM D+ +W+ +I G A+ F M+ +
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST 326
Query: 186 ESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSV 245
ST G SV+SA+ + L+LG+ VHA + GL + +G++L++MYS+C ++ +
Sbjct: 327 RSTLG----SVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAA 382
Query: 246 KVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGG 305
KVFE + +N V W ++I G A +G S + + F DM+ +G D +T+ L C+
Sbjct: 383 KVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASH 442
Query: 306 LVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTL 365
+E G + F S+ + + L +VD+ + G L +A + E M + N V W T+
Sbjct: 443 DLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDN-VTWNTI 500
Query: 366 LGACVNHNDLVLAEKAKERVNELDPHHDG 394
+G+ V + A +R+N DG
Sbjct: 501 IGSYVQDENESEAFDLFKRMNLCGIVSDG 529
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 174/398 (43%), Gaps = 29/398 (7%)
Query: 7 LHATLIKTGQHNNPL---SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRH 63
+HA IK G +N SL + + +C ++ +A A V + +N +IR
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAA------AKVFEALEEKNDVFWNAMIRG 402
Query: 64 LALHSPT-LATTLFSHMHRTGVTVDHFTFPLIXXXXXXX---XXXXXXXXXXXXXGFASN 119
A + + LF M +G +D FTF + A N
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN 462
Query: 120 IFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
+FV NAL++ Y G+L A +F+ M RD +W+T+I + + +EA LF++M L
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNL 522
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
+DG + S + A + + L G VH + GL + G++LI+MYS+CG
Sbjct: 523 ----CGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCG 578
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
I + KVF +P +VV+ +LI G + EA+ F++M G+ P + +
Sbjct: 579 IIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVE 637
Query: 300 ACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLG---RAGMLLEAFKFVEDMPIK 356
AC + G + F ++ G E+ G + LLG + + EA ++
Sbjct: 638 ACHKPESLTLGTQ-FHGQITKRGFSSEGEYLG--ISLLGMYMNSRGMTEACALFSELSSP 694
Query: 357 PNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDG 394
+ V+W ++ H+ E+A + E+ HDG
Sbjct: 695 KSIVLWTGMMSG---HSQNGFYEEALKFYKEM--RHDG 727
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 124/258 (48%), Gaps = 13/258 (5%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G S + NA+++ Y ++ A FD + ++D+ +W++++ +++ G P + L F
Sbjct: 90 GIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSF 148
Query: 175 QQMQLGDPQV-PESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALIN 233
+ L + Q+ P ++LS + +++ E G +H + + GL G AL++
Sbjct: 149 --VSLFENQIFPNKFTFSIVLSTCARETNV---EFGRQIHCSMIKMGLERNSYCGGALVD 203
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
MY++C I + +VFE + N V WT L +G G EA+ F MR+ G RPD A
Sbjct: 204 MYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLA 263
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+ + G ++D +F M S P + + M+ G+ G A ++ +M
Sbjct: 264 FVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCETVAIEYFFNM 318
Query: 354 PIKPNSVIWRTLLGACVN 371
K + R+ LG+ ++
Sbjct: 319 R-KSSVKSTRSTLGSVLS 335
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 3/167 (1%)
Query: 205 ALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLIT 264
AL +G VH+ G+ LG A++++Y++C + + K F+ + ++V W S+++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 265 GLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVY 324
+ G+ + LR+F + E + P+ ++ L C+ VE G ++ SM + G+
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM-IKMGLE 192
Query: 325 PMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVN 371
G +VD+ + + +A + E + + PN+V W L V
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSGYVK 238
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 120/345 (34%), Positives = 189/345 (54%), Gaps = 4/345 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G N+FV ++LI+ Y G +A+ +F M ++ +W+++I C++ N P ++ LF
Sbjct: 506 GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLF 565
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M L P D V + SV+ A+SS +L G +H Y R G+ L ALI+M
Sbjct: 566 NLM-LSQGIFP---DSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDM 621
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y +CG + +F++M H++++TW +I G HG AL F +M++AG PD +
Sbjct: 622 YVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTF 681
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
+ + AC+H G VE+G +FE M+ +YG+ P +EHY MVDLLGRAG+L EA+ F++ MP
Sbjct: 682 LSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMP 741
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
I+ +S IW LL A H+++ L + E++ ++P YV L N Y
Sbjct: 742 IEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAK 801
Query: 415 VRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFL 459
+ M+E + K+PG S + + + F SG +S P EI L
Sbjct: 802 LLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVL 846
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 141/304 (46%), Gaps = 15/304 (4%)
Query: 6 NLHATLIKTGQHNNPL---SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIR 62
+H ++K G HN+P SL + + +C + A+T ++ V R I +N ++
Sbjct: 293 QIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETV-FSCVVDKRLEI-----WNAMVA 346
Query: 63 HLALHSPTL-ATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXX---XXXXXXXXXXGFAS 118
A + A LF M + V D FT + S
Sbjct: 347 AYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQS 406
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
+++AL+ Y G A +F M ++D+ +W +LI NG EAL +F M+
Sbjct: 407 TSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMK 466
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
D + +D +M SV +A + L AL G+ VH + + GL L V +G++LI++YS+C
Sbjct: 467 DDDDSLKPDSD--IMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKC 524
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G + ++KVF M N+V W S+I+ + + ++ F M G+ PD + T+ L
Sbjct: 525 GLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVL 584
Query: 299 VACS 302
VA S
Sbjct: 585 VAIS 588
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 21/245 (8%)
Query: 152 ASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIW 211
AS ++ I G +AL L+ + D P T S++ A S+L L G
Sbjct: 25 ASINSGIRALIQKGEYLQALHLYSKH---DGSSPFWTSVFTFPSLLKACSALTNLSYGKT 81
Query: 212 VHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPH-------RNVVTWTSLIT 264
+H + G + T+L+NMY +CG +D +V+VF+ R+V W S+I
Sbjct: 82 IHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMID 141
Query: 265 GLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL-VACSHGGL-VEDGWRVFESM-RSEY 321
G R +E + FR M G+RPD + + + V C G E+G ++ M R+
Sbjct: 142 GYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSL 201
Query: 322 GVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL------GACVNHNDL 375
L+ ++D+ + G+ ++A++ ++ K N V+W ++ G C + DL
Sbjct: 202 DTDSFLKT--ALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDL 259
Query: 376 VLAEK 380
+ K
Sbjct: 260 YMLAK 264
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQ-------RDLASWSTLIVCFTNNGYP 167
G+ + F+ +L+N Y G L+ AV +FD Q RD+ W+++I +
Sbjct: 90 GWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRF 149
Query: 168 AEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGAL--ELGIWVHAYIRRAGLGLTV 225
E + F++M + + D + V+S + G E G +H ++ R L
Sbjct: 150 KEGVGCFRRMLVFGVR----PDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDS 205
Query: 226 PLGTALINMYSRCG-SIDRSVKVFEEMPHR-NVVTWTSLITGLAVHGRSREALRAFRDMR 283
L TALI+MY + G SID + +VF E+ + NVV W +I G G +L + +
Sbjct: 206 FLKTALIDMYFKFGLSID-AWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAK 264
Query: 284 EAGLRPDGAAYTAALVACSH 303
++ ++T AL ACS
Sbjct: 265 NNSVKLVSTSFTGALGACSQ 284
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 117/293 (39%), Gaps = 50/293 (17%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQR-DLASWSTLIVCFTNNGYPAEALSLFQQ 176
++ F++ ALI+ Y G A +F E+ + ++ W+ +IV F +G +L L+
Sbjct: 203 TDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYML 262
Query: 177 MQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYS 236
+ ++ ++ + A S G +H + + GL + T+L++MYS
Sbjct: 263 AKNNSVKLVSTS----FTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYS 318
Query: 237 RCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTA 296
+CG + + VF + + + W +++ A + AL F MR+ + PD +
Sbjct: 319 KCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSN 378
Query: 297 ALVACSHGGLVE-----------------------------------DGWRVFESMRSEY 321
+ CS GL D + VF+SM +
Sbjct: 379 VISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKD 438
Query: 322 GVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP-----IKPNSVIWRTLLGAC 369
V +G ++ L + G EA K DM +KP+S I ++ AC
Sbjct: 439 MV-----AWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNAC 486
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 191/346 (55%), Gaps = 4/346 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G + + V AL++ Y S A +F +P++D+ SW LI FT NG ++ F
Sbjct: 294 GLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEF 353
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M L + P D ++M+ V+ + S LG LE H+Y+ + G +G +L+ +
Sbjct: 354 SIMLLENNTRP---DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVEL 410
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM-REAGLRPDGAA 293
YSRCGS+ + KVF + ++ V WTSLITG +HG+ +AL F M + + ++P+
Sbjct: 411 YSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVT 470
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+ + L ACSH GL+ +G R+F+ M ++Y + P LEHY +VDLLGR G L A + + M
Sbjct: 471 FLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM 530
Query: 354 PIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXX 413
P P I TLLGAC H + +AE +++ EL+ +H G Y+L+SN Y
Sbjct: 531 PFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVE 590
Query: 414 XVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFL 459
+RNS+++ I K S++ I + VH FV+ D HP+ E + L
Sbjct: 591 KLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLL 636
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 134/253 (52%), Gaps = 7/253 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF++++ + N+L+N Y S + AV+LF + ++D+ SWST+I C+ NG AEAL +F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M + D P + +L V+ A ++ LE G H R GL V + TAL++M
Sbjct: 253 NDM-MDDGTEP---NVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDM 308
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM-REAGLRPDGAA 293
Y +C S + + VF +P ++VV+W +LI+G ++G + ++ F M E RPD
Sbjct: 309 YMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAIL 368
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
L +CS G +E + F S +YG +V+L R G L A K +
Sbjct: 369 MVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI 427
Query: 354 PIKPNSVIWRTLL 366
+K ++V+W +L+
Sbjct: 428 ALK-DTVVWTSLI 439
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 141/297 (47%), Gaps = 9/297 (3%)
Query: 76 FSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXX----XXXXXGFASNIFVQNALINAYG 131
FSHM R D+FT P+ S+++V ++LI Y
Sbjct: 48 FSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYI 107
Query: 132 SSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGV 191
G + A+ +FDE+ + D+ +WS+++ F NG P +A+ F++M + P D V
Sbjct: 108 KCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTP---DRV 164
Query: 192 MMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEM 251
+++++SA + L LG VH ++ R G + L +L+N Y++ + +V +F+ +
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224
Query: 252 PHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGW 311
++V++W+++I +G + EAL F DM + G P+ A L AC+ +E G
Sbjct: 225 AEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGR 284
Query: 312 RVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGA 368
+ E + G+ ++ +VD+ + EA+ +P + + V W L+
Sbjct: 285 KTHE-LAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALISG 339
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 117/281 (41%), Gaps = 41/281 (14%)
Query: 139 AVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVIS 198
A +F EM +R L W+TL+ + E L F M D + P D + +
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHM-FRDEEKP---DNFTLPVALK 68
Query: 199 AVSSLGALELGIWVHAYIRR-AGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVV 257
A L + G +H ++++ LG + +G++LI MY +CG + ++++F+E+ ++V
Sbjct: 69 ACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIV 128
Query: 258 TWTSLITGLAVHGRSREALRAFRDMREAG-LRPDGAAYTAALVACS-----------HGG 305
TW+S+++G +G +A+ FR M A + PD + AC+ HG
Sbjct: 129 TWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGF 188
Query: 306 LVEDGW-----------------RVFE------SMRSEYGVYPMLEHYGCMVDLLGRAGM 342
++ G+ R F+ M +E V C V G A
Sbjct: 189 VIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQN-GAAAE 247
Query: 343 LLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKE 383
L F + D +PN +L AC +DL K E
Sbjct: 248 ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHE 288
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 195/336 (58%), Gaps = 5/336 (1%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N+L++ Y +SGS + A LF EM DL +WS ++ + + P EA+ +F+++Q +
Sbjct: 506 NSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR 565
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
P + V +++++ + L +L L H YI R GLG + L L+++Y++CGS+
Sbjct: 566 -PNT---VTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKH 620
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSH 303
+ VF+ R++V +T+++ G AVHGR +EAL + M E+ ++PD T L AC H
Sbjct: 621 AYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCH 680
Query: 304 GGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWR 363
GL++DG ++++S+R+ +G+ P +E Y C VDL+ R G L +A+ FV MP++PN+ IW
Sbjct: 681 AGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWG 740
Query: 364 TLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENR 423
TLL AC +N + L + + + G++VL+SN Y +RN M++
Sbjct: 741 TLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKE 800
Query: 424 IVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFL 459
+ K G S + +D + FVSGD SHP+ + I +
Sbjct: 801 MKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLV 836
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
+++FV N+L++ Y G + A LF M +DL SW+ +I + +N +A LF +
Sbjct: 261 THVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNL 320
Query: 178 -QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYI-RRAGLGLTVPLGTALINMY 235
GD S D V ++S++ + L L G +H+YI R + L +G ALI+ Y
Sbjct: 321 VHKGDV----SPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFY 376
Query: 236 SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLA 267
+R G + F M +++++W +++ A
Sbjct: 377 ARFGDTSAAYWAFSLMSTKDIISWNAILDAFA 408
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 5/182 (2%)
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
V +++N Y ++ +F +M D W+ ++ + + E + F+ M D
Sbjct: 58 VSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFAD 116
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSI 241
P S V V+ LG G +H+YI +AGL +G AL++MY++ G I
Sbjct: 117 EPKPSS---VTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFI 173
Query: 242 -DRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVA 300
+ F+ + ++VV+W ++I G + + +A R+F M + P+ A L
Sbjct: 174 FPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPV 233
Query: 301 CS 302
C+
Sbjct: 234 CA 235
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 159/423 (37%), Gaps = 87/423 (20%)
Query: 22 SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLALHSPTL-ATTLFSHM- 79
SL +F+LR + A A++ R D +N VI A + A LF ++
Sbjct: 268 SLVSFYLRVGRIEEA------ASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLV 321
Query: 80 HRTGVTVDHFT----FPLIXXXXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGS 135
H+ V+ D T P+ + V NALI+ Y G
Sbjct: 322 HKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGD 381
Query: 136 LNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPEST--DGVMM 193
+ A F M +D+ SW+ ++ F A++ FQ + L + E+ D V +
Sbjct: 382 TSAAYWAFSLMSTKDIISWNAILDAF------ADSPKQFQFLNLLHHLLNEAITLDSVTI 435
Query: 194 LSVISAVSSLGALELGIWVHAYIRRAGL---GLTVPLGTALINMYSRCGSIDRSVKV--- 247
LS++ ++ + VH Y +AGL LG AL++ Y++CG+++ + K+
Sbjct: 436 LSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLG 495
Query: 248 -----------------------------FEEMPHRNVVTWTSLITGLAVHGRSREALRA 278
F EM ++ TW+ ++ A EA+
Sbjct: 496 LSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGV 555
Query: 279 FRDMREAGLRPDGAAYTAALVACS-----------HGGLVEDG-------------WRVF 314
FR+++ G+RP+ L C+ HG ++ G +
Sbjct: 556 FREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKGTLLDVYAKC 615
Query: 315 ESMRSEYGVYPM-----LEHYGCMV---DLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL 366
S++ Y V+ L + MV + GR L + + + IKP+ V T+L
Sbjct: 616 GSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTML 675
Query: 367 GAC 369
AC
Sbjct: 676 TAC 678
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 188 TDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKV 247
TD + L V+ A +S+ L G +H + + G + +++NMY++C +D K+
Sbjct: 19 TDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKM 78
Query: 248 FEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
F +M + V W ++TGL+V RE +R F+ M A P ++ T A+V
Sbjct: 79 FRQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFAD-EPKPSSVTFAIV 128
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G +I ++ L++ Y GSL A +F +RDL ++ ++ + +G EAL ++
Sbjct: 597 GGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIY 656
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRA-GLGLTVPLGTALIN 233
M + + D V + ++++A G ++ G+ ++ IR G+ T+ ++
Sbjct: 657 SHMTESNIK----PDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVD 712
Query: 234 MYSRCGSIDRSVKVFEEMP-HRNVVTWTSLITGLAVHGR 271
+ +R G +D + +MP N W +L+ + R
Sbjct: 713 LIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNR 751
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 228 bits (581), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 195/373 (52%), Gaps = 11/373 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G +I N I+ Y S A LFD M R SW+ +I + G EAL+LF
Sbjct: 286 GTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALF 345
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGL-TVPLGTALIN 233
M + E D V +LS+IS G+LE G W+ A G V + ALI+
Sbjct: 346 HAM----IKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALID 401
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
MYS+CGSI + +F+ P + VVTWT++I G A++G EAL+ F M + +P+
Sbjct: 402 MYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHIT 461
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+ A L AC+H G +E GW F M+ Y + P L+HY CMVDLLGR G L EA + + +M
Sbjct: 462 FLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNM 521
Query: 354 PIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXX 413
KP++ IW LL AC H ++ +AE+A E + L+P YV ++N Y
Sbjct: 522 SAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFA 581
Query: 414 XVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAP 473
+R+ M++ I K PG SV+ ++ H F G++ H + E++ F ++ L +A
Sbjct: 582 RIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVE-NEVIYFTLN-----GLSLFAK 635
Query: 474 NTSSVLHDIQEEE 486
+ + D+ +E+
Sbjct: 636 DKHVLYKDVYKEQ 648
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 144/325 (44%), Gaps = 12/325 (3%)
Query: 57 YNTVIRH-LALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX---XX 112
+N IR + + P + LF M R G ++FTFP +
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 113 XXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALS 172
F S++FV A ++ + S++ A +F+ MP+RD +W+ ++ F +G+ +A S
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 173 LFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALI 232
LF++M+L + + D V ++++I + S +L+L +HA R G+ + V + I
Sbjct: 140 LFREMRLNEI----TPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 233 NMYSRCGSIDRSVKVFEEMPH--RNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
+ Y +CG +D + VFE + R VV+W S+ +V G + +A + M +PD
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD 255
Query: 291 GAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFV 350
+ + +C + + G R+ S G +E + + ++ A + +
Sbjct: 256 LSTFINLAASCQNPETLTQG-RLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSA-RLL 313
Query: 351 EDMPIKPNSVIWRTLLGACVNHNDL 375
D+ V W ++ D+
Sbjct: 314 FDIMTSRTCVSWTVMISGYAEKGDM 338
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 155/385 (40%), Gaps = 41/385 (10%)
Query: 27 FLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLALHSPT-LATTLFSHMHRTGVT 85
F++C ++ YAA V R P D T +N ++ T A +LF M +T
Sbjct: 97 FVKC------NSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT 150
Query: 86 VDHFTFPLIXXXXXXXXXXXXXXXXXXX---XGFASNIFVQNALINAYGSSGSLNLAVHL 142
D T + G + V N I+ YG G L+ A +
Sbjct: 151 PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLV 210
Query: 143 FDEMPQ--RDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAV 200
F+ + + R + SW+++ ++ G +A L+ M + + ST +++ ++
Sbjct: 211 FEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLST----FINLAASC 266
Query: 201 SSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWT 260
+ L G +H++ G + I+MYS+ + +F+ M R V+WT
Sbjct: 267 QNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWT 326
Query: 261 SLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDG-WRVFESMRS 319
+I+G A G EAL F M ++G +PD + + C G +E G W
Sbjct: 327 VMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKW-------- 378
Query: 320 EYGVYPMLEHYGC----------MVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGAC 369
+ + YGC ++D+ + G + EA ++ P K V W T++
Sbjct: 379 ---IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEK-TVVTWTTMIAGY 434
Query: 370 VNHNDLVLAEKAKERVNELD--PHH 392
+ + A K ++ +LD P+H
Sbjct: 435 ALNGIFLEALKLFSKMIDLDYKPNH 459
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 12/220 (5%)
Query: 153 SWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWV 212
+W+ I N P E+L LF++M+ G + P + + + ++ +G E+ V
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFE-PNNFTFPFVAKACARLADVGCCEM---V 74
Query: 213 HAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRS 272
HA++ ++ V +GTA ++M+ +C S+D + KVFE MP R+ TW ++++G G +
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 273 REALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRS---EYGVYPMLEH 329
+A FR+MR + PD + + S E ++ E+M + GV +
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGIRLGVDVQVTV 190
Query: 330 YGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVI-WRTLLGA 368
+ G+ G L A E + +V+ W ++ A
Sbjct: 191 ANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKA 230
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/470 (30%), Positives = 229/470 (48%), Gaps = 48/470 (10%)
Query: 3 RVYNLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIR 62
R+ +HA L++ H + L L F C L ++D YA V P+ +N +I+
Sbjct: 19 RLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSD---YANRVFSHIQNPNVLVFNAMIK 75
Query: 63 HLALHSPTLAT-TLFSHMHRTGVTVDHFTF-PLIXXXXXXXXXXXXXXX--XXXXXGF-- 116
+L P L + + FS M G+ D +T+ PL+ GF
Sbjct: 76 CYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHR 135
Query: 117 -----------------------------ASNIFVQNALINAYGSSGSLNLAVHLFDEMP 147
N+ V N +I + SG + +HLF +M
Sbjct: 136 LGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMS 195
Query: 148 QRDLASWSTLIVCFTNNGYPAEALSLFQQM--QLGDPQVPESTDGVMMLSVISAVSSLGA 205
+R + SW+++I + G EAL LF +M Q DP D +++V+ +SLG
Sbjct: 196 ERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDP------DEATVVTVLPISASLGV 249
Query: 206 LELGIWVHAYIRRAGLGLT-VPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLIT 264
L+ G W+H+ +GL + +G AL++ Y + G ++ + +F +M RNVV+W +LI+
Sbjct: 250 LDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLIS 309
Query: 265 GLAVHGRSREALRAFRDMREAG-LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGV 323
G AV+G+ + F M E G + P+ A + L CS+ G VE G +F M + +
Sbjct: 310 GSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKL 369
Query: 324 YPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKE 383
EHYG MVDL+ R+G + EAFKF+++MP+ N+ +W +LL AC +H D+ LAE A
Sbjct: 370 EARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAM 429
Query: 384 RVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVV 433
+ +++P + G+YVLLSN Y VR M++NR+ K G S +
Sbjct: 430 ELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/354 (35%), Positives = 197/354 (55%), Gaps = 38/354 (10%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTN----------- 163
GF S+++VQ AL+ Y G++ A +FDEMP+R+ +W+ +I TN
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 164 ---------------NGY-----PAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSL 203
+GY P EA+ LF +M D P + + +L+++ AV +L
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKP---NEITILAILPAVWNL 269
Query: 204 GALELGIWVHAYI-RRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPH--RNVVTWT 260
G L++ VHAY+ +R + + + +LI+ Y++CG I + K F E+P+ +N+V+WT
Sbjct: 270 GDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWT 329
Query: 261 SLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGW-RVFESMRS 319
++I+ A+HG +EA+ F+DM GL+P+ + L ACSHGGL E+ + F +M +
Sbjct: 330 TMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVN 389
Query: 320 EYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAE 379
EY + P ++HYGC+VD+L R G L EA K ++PI+ +V+WR LLGAC ++D LAE
Sbjct: 390 EYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAE 449
Query: 380 KAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVV 433
+ ++ EL+ H GDYVL+SN + R M + K PG S V
Sbjct: 450 RVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 123/310 (39%), Gaps = 70/310 (22%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
+ SN+ + + L + + +SG L L + L ++ L+ C++ P A L+
Sbjct: 46 YESNLKIIHQLHSHFTTSGFL----LLHQKQNSGKLFLFNPLLRCYSLGETPLHAYFLYD 101
Query: 176 QMQ----LGD--PQVPESTDGVMMLSVISAVSS-------------LGALELGIWVHAYI 216
Q+Q L D +P D L ++ A S+ L+LG H Y+
Sbjct: 102 QLQRLHFLSDHNKSLP-PFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYV 160
Query: 217 RRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREAL 276
+ TAL+ MY G++ + KVF+EMP RN VTW +ITGL G +AL
Sbjct: 161 Q-----------TALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKAL 209
Query: 277 RAFRDM---------------------REA-----------GLRPDGAAYTAALVACSHG 304
M +EA ++P+ A L A +
Sbjct: 210 CFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNL 269
Query: 305 GLVEDGWRVFESMRSEYGVYPM-LEHYGCMVDLLGRAGMLLEAFKFVEDMPI-KPNSVIW 362
G ++ V + + G P + ++D + G + AFKF ++P + N V W
Sbjct: 270 GDLKMCGSV-HAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSW 328
Query: 363 RTLLGACVNH 372
T++ A H
Sbjct: 329 TTMISAFAIH 338
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/468 (30%), Positives = 236/468 (50%), Gaps = 18/468 (3%)
Query: 7 LHATLIKTGQHNNPL---SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRH 63
LHA +IK G +N +L + +C + Y LR D + TVI
Sbjct: 408 LHAYVIKHGWDSNLQVGNTLIDMYSKC------NLTCYMGRAFLRMHDKDLISWTTVIAG 461
Query: 64 LALHSPTL-ATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX---XXXXGFASN 119
A + + A LF + + + +D I G
Sbjct: 462 YAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT 521
Query: 120 IFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
+ +QN L++ YG ++ A +F+ + +D+ SW+++I NG +EA+ LF++M
Sbjct: 522 V-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRM-- 578
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
+ S D V +L ++SA +SL AL G +H Y+ R G L + A+++MY+ CG
Sbjct: 579 --VETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCG 636
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
+ + VF+ + + ++ +TS+I +HG + A+ F MR + PD ++ A L
Sbjct: 637 DLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLY 696
Query: 300 ACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNS 359
ACSH GL+++G + M EY + P EHY C+VD+LGRA ++EAF+FV+ M +P +
Sbjct: 697 ACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTA 756
Query: 360 VIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSM 419
+W LL AC +H++ + E A +R+ EL+P + G+ VL+SN + VR M
Sbjct: 757 EVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKM 816
Query: 420 RENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIK 467
+ + + K PG S + +D VH+F + D SHP+ +EI + L V ++
Sbjct: 817 KASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 132/280 (47%), Gaps = 23/280 (8%)
Query: 51 IPDPTPY--NTVI-RHLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXX 107
+PD T + NT+I +++ P A L+ +M GV + +FP +
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 108 X---XXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR-DLASWSTLIVCFTN 163
G+ S F+ NAL++ Y + L+ A LFD ++ D W++++ ++
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 164 NGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGL-G 222
+G E L LF++M + P + + ++S ++A +LG +HA + ++
Sbjct: 262 SGKSLETLELFREMHMTGP----APNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 223 LTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM 282
+ + ALI MY+RCG + ++ ++ +M + +VVTW SLI G + +EAL F DM
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 283 REAGLRPDGAAYTAALVACS-----------HGGLVEDGW 311
AG + D + T+ + A H +++ GW
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGW 417
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 121/258 (46%), Gaps = 16/258 (6%)
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ-- 178
F+ L+ YG GSL+ A +FDEMP R +W+T+I + +NG PA AL+L+ M+
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE 176
Query: 179 ---LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMY 235
LG P +++ A + L + G +H+ + + G T + AL++MY
Sbjct: 177 GVPLGLSSFP---------ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMY 227
Query: 236 SRCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
++ + + ++F+ + + V W S+++ + G+S E L FR+M G P+
Sbjct: 228 AKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTI 287
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
+AL AC + G + S+ L ++ + R G + +A + + M
Sbjct: 288 VSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN 347
Query: 355 IKPNSVIWRTLLGACVNH 372
+ V W +L+ V +
Sbjct: 348 -NADVVTWNSLIKGYVQN 364
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 125/290 (43%), Gaps = 13/290 (4%)
Query: 7 LHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIP-DPTPYNTVIRHLA 65
LH+ L+K G H+ + A+ D S A + F D +N+++ +
Sbjct: 204 LHSLLVKLGYHSTGFIVNALVSMYAK---NDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 66 LHSPTLAT-TLFSHMHRTGVTVDHFT----FPLIXXXXXXXXXXXXXXXXXXXXGFASNI 120
+L T LF MH TG + +T +S +
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLG 180
+V NALI Y G + A + +M D+ +W++LI + N EAL F M
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 181 DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGS 240
+ +D V M S+I+A L L G+ +HAY+ + G + +G LI+MYS+C
Sbjct: 381 GHK----SDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 436
Query: 241 IDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
+ F M +++++WT++I G A + EAL FRD+ + + D
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEID 486
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 185/330 (56%), Gaps = 4/330 (1%)
Query: 126 LINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVP 185
+I + G ++ V LF MP++D +W+ +I F +NGY EAL F +M L P
Sbjct: 378 MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKM-LQKEVCP 436
Query: 186 ESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSV 245
S SV+SA +SL L G+ +H + + + + + +L++MY +CG+ + +
Sbjct: 437 NS---YTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAY 493
Query: 246 KVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGG 305
K+F + N+V++ ++I+G + +G ++AL+ F + +G P+G + A L AC H G
Sbjct: 494 KIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVG 553
Query: 306 LVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTL 365
V+ GW+ F+SM+S Y + P +HY CMVDLLGR+G+L +A + MP KP+S +W +L
Sbjct: 554 YVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSL 613
Query: 366 LGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIV 425
L A H + LAE A +++ EL+P YV+LS Y + N + RI
Sbjct: 614 LSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIK 673
Query: 426 KEPGLSVVHIDQVVHEFVSGDNSHPQWEEI 455
K+PG S + + VH F++GD S EEI
Sbjct: 674 KDPGSSWIILKGEVHNFLAGDESQLNLEEI 703
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 17/274 (6%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM-QLGDP 182
+++++ Y G + A LFD M +R++ +W+ +I + G+ + LF +M Q GD
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 183 QVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSID 242
+V +T VM A G +H + R L + LG +L++MYS+ G +
Sbjct: 272 KVNSNTLAVM----FKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMG 327
Query: 243 RSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACS 302
+ VF M +++ V+W SLITGL + EA F M D ++T + S
Sbjct: 328 EAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPG----KDMVSWTDMIKGFS 383
Query: 303 HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIK---PNS 359
G + +F M + + + M+ G EA + M K PNS
Sbjct: 384 GKGEISKCVELFGMMPEKDNI-----TWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNS 438
Query: 360 VIWRTLLGACVNHNDLVLAEKAKERVNELDPHHD 393
+ ++L A + DL+ + RV +++ +D
Sbjct: 439 YTFSSVLSATASLADLIEGLQIHGRVVKMNIVND 472
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 36/231 (15%)
Query: 117 ASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQ 176
++ IF N+ I+ + +G+L A +F +M R + SW +I + NG ++A +F +
Sbjct: 47 STAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDE 106
Query: 177 MQLGDPQVPESTDGVMMLSVISAVSSLG-------------ALELGIWVHAYIRRAG--- 220
M P ++ M+ ++I LG A+ + ++ RAG
Sbjct: 107 M----PVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFV-RAGRFD 161
Query: 221 ----LGLTVPL-------GTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVH 269
L P+ L++ Y R G + +V+VF+ M + VV+ +S++ G
Sbjct: 162 EAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKM 221
Query: 270 GRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSE 320
GR +A F M E + +TA + G EDG+ +F MR E
Sbjct: 222 GRIVDARSLFDRMTERNV----ITWTAMIDGYFKAGFFEDGFGLFLRMRQE 268
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 90/182 (49%), Gaps = 18/182 (9%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
+++ VQN+L++ Y G+ N A +F + + ++ S++T+I ++ NG+ +AL LF +
Sbjct: 471 NDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSML 530
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLG----TALIN 233
+ + +GV L+++SA +G ++LG W Y + + G +++
Sbjct: 531 ESSGKE----PNGVTFLALLSACVHVGYVDLG-W--KYFKSMKSSYNIEPGPDHYACMVD 583
Query: 234 MYSRCGSIDRSVKVFEEM---PHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
+ R G +D + + M PH V W SL++ H R A A + + E L PD
Sbjct: 584 LLGRSGLLDDASNLISTMPCKPHSGV--WGSLLSASKTHLRVDLAELAAKKLIE--LEPD 639
Query: 291 GA 292
A
Sbjct: 640 SA 641
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 129/419 (30%), Positives = 204/419 (48%), Gaps = 13/419 (3%)
Query: 50 PIPDPTPYNTVIR------HLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXX 103
P + YN +I + + + A LF M R G+ TF ++
Sbjct: 314 PSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKT 373
Query: 104 XX---XXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVC 160
F S+ F+ +ALI Y GS + F ++D+ASW+++I C
Sbjct: 374 LEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDC 433
Query: 161 FTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAG 220
N A LF+Q+ + E T +MM SA + AL G + Y ++G
Sbjct: 434 HVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMM----SACADFAALSSGEQIQGYAIKSG 489
Query: 221 LGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFR 280
+ + T+ I+MY++ G++ + +VF E+ + +V T++++I+ LA HG + EAL F
Sbjct: 490 IDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFE 549
Query: 281 DMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRA 340
M+ G++P+ A+ L+AC HGGLV G + F+ M+++Y + P +H+ C+VDLLGR
Sbjct: 550 SMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRT 609
Query: 341 GMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLS 400
G L +A + + + V WR LL +C + D V+ ++ ER+ EL+P G YVLL
Sbjct: 610 GRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLH 669
Query: 401 NAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFL 459
N Y VR MR+ + KEP LS + I H F D SHP + I L
Sbjct: 670 NIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTML 728
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 108/204 (52%), Gaps = 6/204 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G + +F+ N LI+ Y G L+ A+ LFD +RD SW++LI + G E L+L
Sbjct: 178 GLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLL 237
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+M + G ++ + ++ G +E G+ +H Y + G+ + + TAL++M
Sbjct: 238 AKMHRDGLNLTTYALGSVLKACCINLNE-GFIEKGMAIHCYTAKLGMEFDIVVRTALLDM 296
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGL-----AVHGRSREALRAFRDMREAGLRP 289
Y++ GS+ ++K+F MP +NVVT+ ++I+G S EA + F DM+ GL P
Sbjct: 297 YAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEP 356
Query: 290 DGAAYTAALVACSHGGLVEDGWRV 313
+ ++ L ACS +E G ++
Sbjct: 357 SPSTFSVVLKACSAAKTLEYGRQI 380
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 119/256 (46%), Gaps = 21/256 (8%)
Query: 130 YGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTD 189
Y L A LFD MP+R++ S+++LI +T G+ +A+ LF E+ +
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELF----------LEARE 141
Query: 190 GVMMLSVISAVSSLG------ALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
+ L + +LG L+LG +H + GL V L LI+MYS+CG +D+
Sbjct: 142 ANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQ 201
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACS- 302
++ +F+ R+ V+W SLI+G G + E L M GL A + L AC
Sbjct: 202 AMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCI 261
Query: 303 --HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSV 360
+ G +E G + ++ G+ + ++D+ + G L EA K MP K N V
Sbjct: 262 NLNEGFIEKGMAI-HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSK-NVV 319
Query: 361 IWRTLLGACVNHNDLV 376
+ ++ + +++
Sbjct: 320 TYNAMISGFLQMDEIT 335
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 43/300 (14%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCF-----TNNGYPAE 169
G +I V+ AL++ Y +GSL A+ LF MP +++ +++ +I F + +E
Sbjct: 282 GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSE 341
Query: 170 ALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGT 229
A LF MQ + ST V V+ A S+ LE G +HA I + +G+
Sbjct: 342 AFKLFMDMQRRGLEPSPSTFSV----VLKACSAAKTLEYGRQIHALICKNNFQSDEFIGS 397
Query: 230 ALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRP 289
ALI +Y+ GS + ++ F +++ +WTS+I + + A FR + + +RP
Sbjct: 398 ALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRP 457
Query: 290 DGAAYTAALVACS-----------HGGLVEDGWRVFESMR-SEYGVY------------- 324
+ + + AC+ G ++ G F S++ S +Y
Sbjct: 458 EEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVF 517
Query: 325 -----PMLEHYGCMVDLLGRAGMLLEAFKFVEDMP---IKPNSVIWRTLLGACVNHNDLV 376
P + Y M+ L + G EA E M IKPN + +L AC H LV
Sbjct: 518 IEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACC-HGGLV 576
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 9/192 (4%)
Query: 204 GALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLI 263
G++ LG H ++ ++ L + L L+NMY +C + + ++F+ MP RN++++ SLI
Sbjct: 61 GSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLI 120
Query: 264 TGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGV 323
+G G +A+ F + REA L+ D Y AL C ++ G + + G+
Sbjct: 121 SGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-ELLHGLVVVNGL 179
Query: 324 YPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKE 383
+ ++D+ + G L +A D + + V W +L+ V A+E
Sbjct: 180 SQQVFLINVLIDMYSKCGKLDQAMSLF-DRCDERDQVSWNSLISGYVR------VGAAEE 232
Query: 384 RVNELDP-HHDG 394
+N L H DG
Sbjct: 233 PLNLLAKMHRDG 244
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 173/310 (55%), Gaps = 4/310 (1%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
+AL+N Y GSL LA ++D +P+ D S S+LI ++ +G + LF+ M +
Sbjct: 590 SALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGF- 648
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
+ D + S++ A + LG VHAYI + GL +G++L+ MYS+ GSID
Sbjct: 649 ---TMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDD 705
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSH 303
K F ++ +++ WT+LI A HG++ EAL+ + M+E G +PD + L ACSH
Sbjct: 706 CCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSH 765
Query: 304 GGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWR 363
GGLVE+ + SM +YG+ P HY CMVD LGR+G L EA F+ +M IKP++++W
Sbjct: 766 GGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWG 825
Query: 364 TLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENR 423
TLL AC H ++ L + A ++ EL+P G Y+ LSN R M+
Sbjct: 826 TLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTG 885
Query: 424 IVKEPGLSVV 433
+ KEPG S V
Sbjct: 886 VQKEPGWSSV 895
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 154/343 (44%), Gaps = 42/343 (12%)
Query: 69 PTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXXXXXGFASNIFVQNALIN 128
P A LF+ M + G+ D F+ + G ++ V ++L
Sbjct: 434 PGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFT 493
Query: 129 AYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPEST 188
Y GSL + LF +P +D A W+++I F GY EA+ LF +M L D P+ +
Sbjct: 494 LYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEM-LDDGTSPDES 552
Query: 189 DGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVF 248
+ +V++ SS +L G +H Y RAG+ + LG+AL+NMYS+CGS+ + +V+
Sbjct: 553 ---TLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVY 609
Query: 249 EEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACS------ 302
+ +P + V+ +SLI+G + HG ++ FRDM +G D A ++ L A +
Sbjct: 610 DRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESS 669
Query: 303 -----HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLL-------------------- 337
H + + G S+ S + M +G + D
Sbjct: 670 LGAQVHAYITKIGLCTEPSVGSS--LLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIAS 727
Query: 338 ----GRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLV 376
G+A L+ + +++ KP+ V + +L AC +H LV
Sbjct: 728 YAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSAC-SHGGLV 769
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 126/268 (47%), Gaps = 16/268 (5%)
Query: 42 AAAVLLRFPIPDPTPYNTVIRHLALHSPTL-ATTLFSHMHRTGVTVDHFTFPLIXXXXXX 100
A V R P P + ++ + A +F M +GV +++ T +
Sbjct: 304 AMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR 363
Query: 101 XXXXXXXXXX---XXXXGFASNIFVQNALINAYGSSGSLNLAVHLF---DEMPQRDLASW 154
GF + V ALI+ Y SG ++L+ +F D++ ++++ +
Sbjct: 364 PSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN- 422
Query: 155 STLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHA 214
+I F+ + P +A+ LF +M + E SV S +S L L LG VH
Sbjct: 423 -VMITSFSQSKKPGKAIRLFTRMLQEGLRTDE-------FSVCSLLSVLDCLNLGKQVHG 474
Query: 215 YIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSRE 274
Y ++GL L + +G++L +YS+CGS++ S K+F+ +P ++ W S+I+G +G RE
Sbjct: 475 YTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLRE 534
Query: 275 ALRAFRDMREAGLRPDGAAYTAALVACS 302
A+ F +M + G PD + A L CS
Sbjct: 535 AIGLFSEMLDDGTSPDESTLAAVLTVCS 562
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 126/255 (49%), Gaps = 18/255 (7%)
Query: 117 ASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQ 176
A ++FV A+++ Y G + A+ +F +P + SW+ ++ +T + AL +F++
Sbjct: 282 AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKE 341
Query: 177 MQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYS 236
M+ ++ T + SVISA + VHA++ ++G L + ALI+MYS
Sbjct: 342 MRHSGVEINNCT----VTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYS 397
Query: 237 RCGSIDRSVKVFEEM---PHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
+ G ID S +VFE++ +N+V +IT + + +A+R F M + GLR D +
Sbjct: 398 KSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFS 455
Query: 294 YTAAL--VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVE 351
+ L + C + G G+ + + G+ L + L + G L E++K +
Sbjct: 456 VCSLLSVLDCLNLGKQVHGYTL------KSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQ 509
Query: 352 DMPIKPNSVIWRTLL 366
+P K N+ W +++
Sbjct: 510 GIPFKDNAC-WASMI 523
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 121/276 (43%), Gaps = 9/276 (3%)
Query: 42 AAAVLLRFPIPDPTPYNTVIRHLALHSP-TLATTLFSHMHRTGVTVDHFTFPLIXXXXXX 100
AA + P PD N +I H + FS MH G + ++ +
Sbjct: 103 AAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSA 162
Query: 101 XXXXXXXXXX---XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTL 157
G+ V++ALI+ + + A +F + ++ W+T+
Sbjct: 163 LQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTI 222
Query: 158 IVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIR 217
I N LF +M +G Q P D SV++A +SL L G V A +
Sbjct: 223 IAGALRNQNYGAVFDLFHEMCVG-FQKP---DSYTYSSVLAACASLEKLRFGKVVQARVI 278
Query: 218 RAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALR 277
+ G V + TA++++Y++CG + +++VF +P+ +VV+WT +++G + AL
Sbjct: 279 KCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALE 337
Query: 278 AFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRV 313
F++MR +G+ + T+ + AC +V + +V
Sbjct: 338 IFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQV 373
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 118/256 (46%), Gaps = 7/256 (2%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
++F+ +L++ Y +SGS+ A LFD +PQ D+ S + +I + + E+L F +M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+ E + G SVISA S+L A V + + G + +ALI+++S+
Sbjct: 143 FLGFEANEISYG----SVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKN 198
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
+ + KVF + NV W ++I G + F +M +PD Y++ L
Sbjct: 199 LRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVL 258
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
AC+ + G +V ++ + G + +VDL + G + EA + +P P+
Sbjct: 259 AACASLEKLRFG-KVVQARVIKCGAEDVFVCTA-IVDLYAKCGHMAEAMEVFSRIP-NPS 315
Query: 359 SVIWRTLLGACVNHND 374
V W +L ND
Sbjct: 316 VVSWTVMLSGYTKSND 331
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 7/161 (4%)
Query: 216 IRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREA 275
+RR L V L +L++ YS GS+ + K+F+ +P +VV+ +I+G H E+
Sbjct: 75 LRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEES 134
Query: 276 LRAFRDMREAGLRPDGAAYTAALVACS--HGGLVEDGWRVFESMRSEYGVYPMLEHYGCM 333
LR F M G + +Y + + ACS L + +++ Y Y ++E +
Sbjct: 135 LRFFSKMHFLGFEANEISYGSVISACSALQAPLFSE-LVCCHTIKMGYFFYEVVE--SAL 191
Query: 334 VDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL-GACVNHN 373
+D+ + +A+K D + N W T++ GA N N
Sbjct: 192 IDVFSKNLRFEDAYKVFRD-SLSANVYCWNTIIAGALRNQN 231
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 191/335 (57%), Gaps = 9/335 (2%)
Query: 126 LINAYGSSGSLNLAVHLFDE--MPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
LI+ Y SG + ++ LF+ +RD A+W+++I +T NG+ + +F++M L
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKM-LEQNI 517
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
P + V + S++ A S +G+++LG +H + R L V + +AL++MYS+ G+I
Sbjct: 518 RP---NAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKY 574
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSH 303
+ +F + RN VT+T++I G HG A+ F M+E+G++PD + A L ACS+
Sbjct: 575 AEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSY 634
Query: 304 GGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN-SVIW 362
GL+++G ++FE MR Y + P EHY C+ D+LGR G + EA++FV+ + + N + +W
Sbjct: 635 SGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELW 694
Query: 363 RTLLGACVNHNDLVLAEKAKERVNELD--PHHDGDYVLLSNAYXXXXXXXXXXXVRNSMR 420
+LLG+C H +L LAE ER+ + D + G VLLSN Y VR MR
Sbjct: 695 GSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMR 754
Query: 421 ENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEI 455
E + KE G S + I V+ FVS D HP EI
Sbjct: 755 EKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEI 789
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 121/247 (48%), Gaps = 27/247 (10%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
+ ++FV ++ I+ Y G + + +FD +R++ W+T+I + N E++ LF
Sbjct: 247 YVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFL 306
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMY 235
+ +G ++ +D V L SAVS+L +ELG H ++ + L + + +L+ MY
Sbjct: 307 E-AIGSKEIV--SDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMY 363
Query: 236 SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
SRCGS+ +S VF M R+VV+W ++I+ +G E L +M++ G + D T
Sbjct: 364 SRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVT 423
Query: 296 AALVACS-----------HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLL 344
A L A S H L+ G + FE M S ++D+ ++G++
Sbjct: 424 ALLSAASNLRNKEIGKQTHAFLIRQGIQ-FEGMNSY------------LIDMYSKSGLIR 470
Query: 345 EAFKFVE 351
+ K E
Sbjct: 471 ISQKLFE 477
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 26/258 (10%)
Query: 134 GSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMM 193
G+ LA LFD +P+ W+T+I+ F N P EAL + +M+ P + D
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFT--NCDAYTY 110
Query: 194 LSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSI------DRSVKV 247
S + A + L+ G VH ++ R + + +L+NMY C + D KV
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKV 170
Query: 248 FEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLV 307
F+ M +NVV W +LI+ GR+ EA R F M ++P ++ A S +
Sbjct: 171 FDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSI 230
Query: 308 EDGWRVF---------ESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
+ VF E ++ + V + Y + D +E+ + V D ++ N
Sbjct: 231 KKA-NVFYGLMLKLGDEYVKDLFVVSSAISMYAELGD--------IESSRRVFDSCVERN 281
Query: 359 SVIWRTLLGACVNHNDLV 376
+W T++G V ++ LV
Sbjct: 282 IEVWNTMIGVYVQNDCLV 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N+FV +AL++ Y +G++ A +F + +R+ +++T+I+ + +G A+SLF MQ
Sbjct: 555 NVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQ 614
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRA-GLGLTVPLGTALINMYSR 237
+ D + ++V+SA S G ++ G+ + +R + + + +M R
Sbjct: 615 ESGIK----PDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGR 670
Query: 238 CGSIDRSVKVFEEMPHRNVVT--WTSLITGLAVHG 270
G ++ + + + + + W SL+ +HG
Sbjct: 671 VGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHG 705
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 186/330 (56%), Gaps = 8/330 (2%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
+ F+ + LI+ YG G L+ A +F++M ++D +W+ +I ++ NG +EA LF +M+
Sbjct: 267 STFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEME 326
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+ S D + +V+SA S+GALELG + + L + + T L++MY +C
Sbjct: 327 ----KTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKC 382
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G ++ +++VFE MP +N TW ++IT A G ++EAL F M + P + L
Sbjct: 383 GRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVL 439
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
AC H GLV G R F M S +G+ P +EHY ++DLL RAGML EA++F+E P KP+
Sbjct: 440 SACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPD 499
Query: 359 SVIWRTLLGACVNHNDLVLAEKAKERVNEL-DPHHDGDYVLLSNAYXXXXXXXXXXXVRN 417
++ +LGAC D+ + EKA + E+ + + G+YV+ SN +R
Sbjct: 500 EIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRA 559
Query: 418 SMRENRIVKEPGLSVVHIDQVVHEFVSGDN 447
MR+ +VK PG S + I+ + EF++G +
Sbjct: 560 LMRDRGVVKTPGCSWIEIEGELMEFLAGSD 589
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 161/322 (50%), Gaps = 11/322 (3%)
Query: 52 PDPTPYNTVIRHLA--LHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXX---XX 106
P+ +N +IR L + A +L+ M +G+ D FT+ +
Sbjct: 94 PNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRS 153
Query: 107 XXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGY 166
G ++ + ++LI Y G + A LFDE+ +RD SW+++I ++ GY
Sbjct: 154 VHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGY 213
Query: 167 PAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVP 226
+A+ LF++M+ + E T ++S++ A S LG L G + +GL+
Sbjct: 214 AKDAMDLFRKMEEEGFEPDERT----LVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF 269
Query: 227 LGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAG 286
LG+ LI+MY +CG +D + +VF +M ++ V WT++IT + +G+S EA + F +M + G
Sbjct: 270 LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTG 329
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
+ PD + L AC G +E G ++ E+ SE + + +VD+ G+ G + EA
Sbjct: 330 VSPDAGTLSTVLSACGSVGALELGKQI-ETHASELSLQHNIYVATGLVDMYGKCGRVEEA 388
Query: 347 FKFVEDMPIKPNSVIWRTLLGA 368
+ E MP+K N W ++ A
Sbjct: 389 LRVFEAMPVK-NEATWNAMITA 409
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 96/223 (43%), Gaps = 17/223 (7%)
Query: 72 ATTLFSHMHRTGVTVDHFTFPLIXXX---XXXXXXXXXXXXXXXXXGFASNIFVQNALIN 128
A LF M +TGV+ D T + NI+V L++
Sbjct: 318 AFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVD 377
Query: 129 AYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPEST 188
YG G + A+ +F+ MP ++ A+W+ +I + + G+ EAL LF +M VP S
Sbjct: 378 MYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM-----SVPPSD 432
Query: 189 DGVMMLSVISAVSSLGALELGI-WVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKV 247
+ + V+SA G + G + H GL + T +I++ SR G +D + +
Sbjct: 433 --ITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEF 490
Query: 248 FEEMPHRNVVTWTSLITGLAVHGRS-----REALRAFRDMREA 285
E P + + I G A H R +A+R +M+EA
Sbjct: 491 MERFPGKPDEIMLAAILG-ACHKRKDVAIREKAMRMLMEMKEA 532
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 192/344 (55%), Gaps = 7/344 (2%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLA-SWSTLIVCFTNNGYPAEALSLFQQ 176
++I+V +LI+ Y G NLA +F + Q+D+A SW+ +I + + G +A+ ++ Q
Sbjct: 342 ADIYVNCSLIDLYFKCGEANLAETVFSK-TQKDVAESWNVMISSYISVGNWFKAVEVYDQ 400
Query: 177 MQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYS 236
M V D V SV+ A S L ALE G +H I + L L +AL++MYS
Sbjct: 401 M----VSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYS 456
Query: 237 RCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTA 296
+CG+ + ++F +P ++VV+WT +I+ HG+ REAL F +M++ GL+PDG A
Sbjct: 457 KCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLA 516
Query: 297 ALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP-I 355
L AC H GL+++G + F MRS+YG+ P++EHY CM+D+LGRAG LLEA++ ++ P
Sbjct: 517 VLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPET 576
Query: 356 KPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXV 415
N+ + TL AC H + L ++ + E P Y++L N Y V
Sbjct: 577 SDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRV 636
Query: 416 RNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFL 459
R M+E + K+PG S + + V F + D SH + E + + L
Sbjct: 637 RLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECL 680
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G+ ++ V ++L+ Y ++ +FDEMP+RD+ASW+T+I CF +G +AL LF
Sbjct: 137 GYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELF 196
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+M+ + P S V + ISA S L LE G +H + G L + +AL++M
Sbjct: 197 GRMESSGFE-PNS---VSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDM 252
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y +C ++ + +VF++MP +++V W S+I G G S+ + M G RP
Sbjct: 253 YGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTL 312
Query: 295 TAALVACSH 303
T+ L+ACS
Sbjct: 313 TSILMACSR 321
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 126/258 (48%), Gaps = 6/258 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF + +V +AL++ YG L +A +F +MP++ L +W+++I + G + +
Sbjct: 238 GFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEIL 297
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+M + + ++T + S++ A S L G ++H Y+ R+ + + + +LI++
Sbjct: 298 NRMIIEGTRPSQTT----LTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDL 353
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y +CG + + VF + +W +I+ G +A+ + M G++PD +
Sbjct: 354 YFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTF 413
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
T+ L ACS +E G ++ S+ SE + ++D+ + G EAF+ +P
Sbjct: 414 TSVLPACSQLAALEKGKQIHLSI-SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP 472
Query: 355 IKPNSVIWRTLLGACVNH 372
K + V W ++ A +H
Sbjct: 473 -KKDVVSWTVMISAYGSH 489
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 127/263 (48%), Gaps = 10/263 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR-DLASWSTLIVCFTNNGYPAEALSL 173
G ++ + +LIN Y + A H+F+ R D+ W++L+ ++ N + L +
Sbjct: 34 GLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEV 93
Query: 174 FQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALIN 233
F+++ VP D +VI A +LG LG +H + ++G V + ++L+
Sbjct: 94 FKRLLNCSICVP---DSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVG 150
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
MY++ + S++VF+EMP R+V +W ++I+ G + +AL F M +G P+ +
Sbjct: 151 MYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVS 210
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHY--GCMVDLLGRAGMLLEAFKFVE 351
T A+ ACS +E G + R L+ Y +VD+ G+ L A + +
Sbjct: 211 LTVAISACSRLLWLERGKEIH---RKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQ 267
Query: 352 DMPIKPNSVIWRTLLGACVNHND 374
MP + + V W +++ V D
Sbjct: 268 KMP-RKSLVAWNSMIKGYVAKGD 289
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 199/342 (58%), Gaps = 6/342 (1%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
S+ FVQN+LI+ Y SGS++ A +F+++ R + +W++++ F+ NG EA+SLF M
Sbjct: 437 SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYM 496
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
++ E V L+VI A SS+G+LE G WVH + +GL + TALI+MY++
Sbjct: 497 YHSYLEMNE----VTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAK 551
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
CG ++ + VF M R++V+W+S+I +HGR A+ F M E+G +P+ +
Sbjct: 552 CGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNV 611
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
L AC H G VE+G F M+S +GV P EH+ C +DLL R+G L EA++ +++MP
Sbjct: 612 LSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLA 670
Query: 358 NSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRN 417
++ +W +L+ C H + + + K ++++ G Y LLSN Y +R+
Sbjct: 671 DASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRS 730
Query: 418 SMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFL 459
+M+ + + K PG S + IDQ V F +G+ + Q +EI +FL
Sbjct: 731 AMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFL 772
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 180/408 (44%), Gaps = 47/408 (11%)
Query: 4 VYNLHATLIKTGQ-HNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIR 62
V LHA L+ TG+ +PL + A + S D++ V FP PD Y +I+
Sbjct: 17 VSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRL---VFEAFPYPDSFMYGVLIK 73
Query: 63 -HLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXX----XXXGFA 117
++ H A L+ + + F FP + G
Sbjct: 74 CNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVD 133
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
+ ++ +L+ YG +G+L+ A +FD MP RDL +WSTL+ NG +AL +F+ M
Sbjct: 134 DDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCM 193
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
+ D P D V M+SV+ + LG L + VH I R L L +L+ MYS+
Sbjct: 194 -VDDGVEP---DAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSK 249
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
CG + S ++FE++ +N V+WT++I+ S +ALR+F +M ++G+ P+ +
Sbjct: 250 CGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSV 309
Query: 298 LVACSHGGLVEDGWRV------------FESMR-------SEYGVYPMLE---------- 328
L +C GL+ +G V +ES+ +E G E
Sbjct: 310 LSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRN 369
Query: 329 --HYGCMVDLLGRAGMLLEAFKFVEDM---PIKPNSVIWRTLLGACVN 371
+ ++ L GM+++A M IKP++ + + AC N
Sbjct: 370 IVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACEN 417
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 127/279 (45%), Gaps = 41/279 (14%)
Query: 125 ALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM--QLGDP 182
AL+ Y G L+ + + R++ +W++LI + + G +AL LF+QM Q P
Sbjct: 344 ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKP 403
Query: 183 QVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSID 242
D + S ISA + G + LG +H ++ R + + +LI+MYS+ GS+D
Sbjct: 404 ------DAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVD 456
Query: 243 RSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACS 302
+ VF ++ HR+VVTW S++ G + +G S EA+ F M + L + + A + ACS
Sbjct: 457 SASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACS 516
Query: 303 HGGLVEDG-W----RVFESMRSEYGVYPMLEHYGCMVDLL-------------------- 337
G +E G W + ++ + +++ Y DL
Sbjct: 517 SIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSM 576
Query: 338 -------GRAGMLLEAFKFVEDMPIKPNSVIWRTLLGAC 369
GR G + F + + KPN V++ +L AC
Sbjct: 577 INAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSAC 615
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLG--D 181
N+L+ Y G L + +F+++ +++ SW+ +I + + +AL F +M +
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 300
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTV-PLGTALINMYSRCGS 240
P + V + SV+S+ +G + G VH + R L L AL+ +Y+ CG
Sbjct: 301 PNL------VTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGK 354
Query: 241 IDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVA 300
+ V + RN+V W SLI+ A G +AL FR M ++PD +++ A
Sbjct: 355 LSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA 414
Query: 301 CSHGGLVEDGWRV 313
C + GLV G ++
Sbjct: 415 CENAGLVPLGKQI 427
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 218 bits (555), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 196/346 (56%), Gaps = 9/346 (2%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N+ +++ Y S+G ++ A LF+ P +D+ W+ ++ + EAL LF+ MQ
Sbjct: 212 NVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQ 271
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+ D +++S+++ + GALE G W+H YI + + +GTAL++MY++C
Sbjct: 272 TAGIR----PDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKC 327
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G I+ +++VF E+ R+ +WTSLI GLA++G S AL + +M G+R D + A L
Sbjct: 328 GCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVL 387
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
AC+HGG V +G ++F SM + V P EH C++DLL RAG+L EA + ++ M + +
Sbjct: 388 TACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESD 447
Query: 359 SV---IWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXV 415
++ +LL A N+ ++ +AE+ E++ +++ + LL++ Y V
Sbjct: 448 ETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNV 507
Query: 416 RNSMRENRIVKEPGLSVVHIDQVVHEFVSGDN--SHPQWEEIMKFL 459
R M++ I K PG S + ID V HEF+ GD+ SHP+ +EI L
Sbjct: 508 RRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSML 553
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 41/295 (13%)
Query: 52 PDPTPYNTVIRHLAL-HSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX 110
P YN +++ LA S T LF + G+ D+FT P++
Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 111 ---XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYP 167
G + +V N+L+ Y S G + + +FDEMPQRD+ SW+ LI + NG
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRF 128
Query: 168 AEALSLFQQM-QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVP 226
+A+ +F++M Q + + E T ++S +SA S+L LE+G ++ ++ ++V
Sbjct: 129 EDAIGVFKRMSQESNLKFDEGT----IVSTLSACSALKNLEIGERIYRFVVTE-FEMSVR 183
Query: 227 LGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRS-------------- 272
+G AL++M+ +CG +D++ VF+ M +NV WTS++ G GR
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 273 -----------------REALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDG 310
EAL FR M+ AG+RPD + L C+ G +E G
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG 298
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
Query: 169 EALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLG 228
+ L+LF +++ G P D + V+ ++ L + G VH Y +AGL +
Sbjct: 29 KVLALFGELR-GQGLYP---DNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVS 84
Query: 229 TALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM-REAGL 287
+L+ MY+ G I+ + KVF+EMP R+VV+W LI+ +GR +A+ F+ M +E+ L
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNL 144
Query: 288 RPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAF 347
+ D + L ACS +E G R++ + +E+ + + + +VD+ + G L +A
Sbjct: 145 KFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALVDMFCKCGCLDKAR 202
Query: 348 KFVEDMPIKPNSVIWRTLL 366
+ M K N W +++
Sbjct: 203 AVFDSMRDK-NVKCWTSMV 220
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 218 bits (555), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 117/315 (37%), Positives = 174/315 (55%), Gaps = 4/315 (1%)
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLG 180
++Q ++I+ Y L+ A LF+ R++ W+TLI F EA LF+QM L
Sbjct: 247 YLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQM-LR 305
Query: 181 DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGS 240
+ +P + +++ + SSLG+L G VH Y+ R G+ + T+ I+MY+RCG+
Sbjct: 306 ESILPNQCT---LAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGN 362
Query: 241 IDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVA 300
I + VF+ MP RNV++W+S+I ++G EAL F M+ + P+ + + L A
Sbjct: 363 IQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSA 422
Query: 301 CSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSV 360
CSH G V++GW+ FESM +YGV P EHY CMVDLLGRAG + EA F+++MP+KP +
Sbjct: 423 CSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMAS 482
Query: 361 IWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMR 420
W LL AC H ++ LA + E++ ++P YVLLSN Y VR M
Sbjct: 483 AWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMG 542
Query: 421 ENRIVKEPGLSVVHI 435
K G S +
Sbjct: 543 IKGYRKHVGQSATEV 557
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 133/289 (46%), Gaps = 38/289 (13%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G + +V +L+ Y G++ A +FDE+P R+ W L+ + E LF
Sbjct: 139 GLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLF 198
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAY-IRRAGLGLTVPLGTALIN 233
M+ + D + ++ ++ A ++ A ++G VH IRR+ + + L ++I+
Sbjct: 199 CLMR----DTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIID 254
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
MY +C +D + K+FE RNVV WT+LI+G A R+ EA FR M + P+
Sbjct: 255 MYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCT 314
Query: 294 YTAALVACS-----------HGGLVEDGWRV-------FESMRSEYG-------VYPMLE 328
A LV+CS HG ++ +G + F M + G V+ M+
Sbjct: 315 LAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP 374
Query: 329 H-----YGCMVDLLGRAGMLLEA---FKFVEDMPIKPNSVIWRTLLGAC 369
+ M++ G G+ EA F ++ + PNSV + +LL AC
Sbjct: 375 ERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSAC 423
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 15/259 (5%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMP--QRDLASWSTLIVCFTNNGYPAEALS 172
GF + + ++L NAY S L+ A F+ +P +R+ SW+T++ +GY
Sbjct: 34 GFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTIL-----SGYSKSKTC 88
Query: 173 LFQQMQLGDPQVPESTDGVMMLSVISAVSS---LGALELGIWVHAYIRRAGLGLTVPLGT 229
+ + L ++ DGV +++ A+ + LG LE GI +H + GL +
Sbjct: 89 CYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAP 148
Query: 230 ALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRP 289
+L+ MY++ G+++ + KVF+E+P RN V W L+ G + + E R F MR+ GL
Sbjct: 149 SLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLAL 208
Query: 290 DGAAYTAALVACSH--GGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAF 347
D + AC + G V RS L+ ++D+ + +L A
Sbjct: 209 DALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQ--ASIIDMYVKCRLLDNAR 266
Query: 348 KFVEDMPIKPNSVIWRTLL 366
K E + N V+W TL+
Sbjct: 267 KLFET-SVDRNVVMWTTLI 284
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/366 (32%), Positives = 186/366 (50%), Gaps = 6/366 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G S + +++AL++ Y GS+ A +F+ + D S + ++V NG EA+ F
Sbjct: 286 GIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFF 345
Query: 175 QQM-QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALIN 233
+M Q G V+ +S I +SLG LG +H+ + + + LIN
Sbjct: 346 IRMLQAGVEIDANVVSAVLGVSFID--NSLG---LGKQLHSLVIKRKFSGNTFVNNGLIN 400
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
MYS+CG + S VF MP RN V+W S+I A HG AL+ + +M ++P
Sbjct: 401 MYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVT 460
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+ + L ACSH GL++ G + M+ +G+ P EHY C++D+LGRAG+L EA F++ +
Sbjct: 461 FLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSL 520
Query: 354 PIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXX 413
P+KP+ IW+ LLGAC H D + E A E++ + P ++L++N Y
Sbjct: 521 PLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERA 580
Query: 414 XVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAP 473
M+ + KE G+S + I+ H FV D HPQ E I L + + GY P
Sbjct: 581 KTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRP 640
Query: 474 NTSSVL 479
+ +L
Sbjct: 641 DKRFIL 646
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 6/232 (2%)
Query: 120 IFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
+ V N+L++ Y G L A+ LFDEMP RD+ S + + F N L ++M L
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM-L 148
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
G +T + V+S + + +HA +G + +G LI Y +CG
Sbjct: 149 GSGGFDHAT----LTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCG 204
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
VF+ M HRNV+T T++I+GL + + LR F MR + P+ Y +AL
Sbjct: 205 CSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALA 264
Query: 300 ACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVE 351
ACS + +G ++ ++ +YG+ L ++D+ + G + +A+ E
Sbjct: 265 ACSGSQRIVEGQQI-HALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFE 315
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 172/441 (39%), Gaps = 74/441 (16%)
Query: 7 LHATLIKTGQ---------HNNPL----SLRTFFLRCAELPSADTASYAAAVLLRFPIPD 53
LHA++IK + H N L SL + + +C +L A + P+ D
Sbjct: 67 LHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDA------IKLFDEMPMRD 120
Query: 54 PTPYNTVIRHLALHSPTLAT-TLFSHMHRTGVTVDHFTFPLIXXXXXX---XXXXXXXXX 109
N V + T + L M +G DH T ++
Sbjct: 121 VISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHA 179
Query: 110 XXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAE 169
G+ I V N LI +Y G +FD M R++ + + +I N +
Sbjct: 180 LAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHED 239
Query: 170 ALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGT 229
L LF M+ G P S V LS ++A S + G +HA + + G+ + + +
Sbjct: 240 GLRLFSLMRRGLVH-PNS---VTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIES 295
Query: 230 ALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRP 289
AL++MYS+CGSI+ + +FE + V+ T ++ GLA +G EA++ F M +AG+
Sbjct: 296 ALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEI 355
Query: 290 DGAAYTAALVAC-----------------------------------SHGGLVEDGWRVF 314
D +A L S G + D VF
Sbjct: 356 DANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVF 415
Query: 315 ESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM---PIKPNSVIWRTLLGACVN 371
M V + M+ R G L A K E+M +KP V + +LL AC +
Sbjct: 416 RRMPKRNYV-----SWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHAC-S 469
Query: 372 HNDLVLAEKAKERVNELDPHH 392
H L+ +K +E +NE+ H
Sbjct: 470 HVGLI--DKGRELLNEMKEVH 488
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 197/355 (55%), Gaps = 6/355 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF S++++ ++L+ Y SG + A +F+EMP+R++ SW+ +I F L L+
Sbjct: 150 GFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLY 209
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+M+ + T +++SA + GAL G VH GL + + +LI+M
Sbjct: 210 SKMRKSTSDPNDYT----FTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISM 265
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMR-EAGLRPDGAA 293
Y +CG + + ++F++ +++VV+W S+I G A HG + +A+ F M ++G +PD
Sbjct: 266 YCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAIT 325
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
Y L +C H GLV++G R F ++ +E+G+ P L HY C+VDLLGR G+L EA + +E+M
Sbjct: 326 YLGVLSSCRHAGLVKEG-RKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENM 384
Query: 354 PIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXX 413
P+KPNSVIW +LL +C H D+ +A E L+P +V L+N Y
Sbjct: 385 PMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAA 444
Query: 414 XVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKL 468
VR M++ + PG S + I+ V F + D S+ + EI+ L ++D ++
Sbjct: 445 TVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLIDHMEF 499
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 11/216 (5%)
Query: 162 TNNGYPAEALSLFQQMQLGDPQVPESTDGVMM--LSVISAVSSLGA---LELGIWVHAYI 216
T NG S+ +++ L D DG + SAV S G G H
Sbjct: 91 TKNGVS----SVLEEVMLEDSSSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLA 146
Query: 217 RRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREAL 276
+ G V LG++L+ +Y G ++ + KVFEEMP RNVV+WT++I+G A R L
Sbjct: 147 LKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICL 206
Query: 277 RAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDL 336
+ + MR++ P+ +TA L AC+ G + G R G+ L ++ +
Sbjct: 207 KLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG-RSVHCQTLHMGLKSYLHISNSLISM 265
Query: 337 LGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNH 372
+ G L +AF+ + K + V W +++ H
Sbjct: 266 YCKCGDLKDAFRIFDQFSNK-DVVSWNSMIAGYAQH 300
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 175/308 (56%), Gaps = 4/308 (1%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N++I Y S G ++ A +F+ + + L SW+++ F+ NG E L F QM D
Sbjct: 388 NSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLD-- 445
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
+P TD V + SVISA +S+ +LELG V A GL + ++LI++Y +CG ++
Sbjct: 446 LP--TDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEH 503
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSH 303
+VF+ M + V W S+I+G A +G+ EA+ F+ M AG+RP + L AC++
Sbjct: 504 GRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNY 563
Query: 304 GGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWR 363
GLVE+G ++FESM+ ++G P EH+ CMVDLL RAG + EA VE+MP + +W
Sbjct: 564 CGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWS 623
Query: 364 TLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENR 423
++L CV + + +KA E++ EL+P + YV LS + VR MREN
Sbjct: 624 SILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENN 683
Query: 424 IVKEPGLS 431
+ K PG S
Sbjct: 684 VTKNPGSS 691
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 40/261 (15%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N +++ + +G L++A LF+ MP++D+ + ++L+ + NGY EAL LF+++
Sbjct: 128 NVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNF---- 183
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGS--- 240
S D + + +V+ A + L AL+ G +HA I G+ + ++L+N+Y++CG
Sbjct: 184 ---SADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRM 240
Query: 241 ----------------------------IDRSVKVFEEMPHRNVVTWTSLITGLAVHGRS 272
++ S +F+ +R V+ W S+I+G +
Sbjct: 241 ASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMK 300
Query: 273 REALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGC 332
EAL F +MR R D A + AC G +E G + ++G+ +
Sbjct: 301 MEALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETG-KQMHCHACKFGLIDDIVVAST 358
Query: 333 MVDLLGRAGMLLEAFKFVEDM 353
++D+ + G +EA K ++
Sbjct: 359 LLDMYSKCGSPMEACKLFSEV 379
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 128/274 (46%), Gaps = 38/274 (13%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
+ALI+ Y + G +N + LFD R + W+++I + N EAL LF +M+ +
Sbjct: 257 SALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE 316
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGS--- 240
D + +VI+A LG LE G +H + + GL + + + L++MYS+CGS
Sbjct: 317 -----DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPME 371
Query: 241 ----------------------------IDRSVKVFEEMPHRNVVTWTSLITGLAVHGRS 272
ID + +VFE + ++++++W S+ G + +G +
Sbjct: 372 ACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCT 431
Query: 273 REALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGC 332
E L F M + L D + ++ + AC+ +E G +VF + + G+
Sbjct: 432 VETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVF-ARATIVGLDSDQVVSSS 490
Query: 333 MVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL 366
++DL + G +E + V D +K + V W +++
Sbjct: 491 LIDLYCKCG-FVEHGRRVFDTMVKSDEVPWNSMI 523
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 110/272 (40%), Gaps = 26/272 (9%)
Query: 42 AAAVLLRFPIPDPTPYNTVIRHLALHSPTLATTLFSH-MHRTGVTVDHFTFPLIXXXXXX 100
A V R +N++ + + T+ T + H MH+ + D + +
Sbjct: 403 AKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACAS 462
Query: 101 XXXXX---XXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTL 157
G S+ V ++LI+ Y G + +FD M + D W+++
Sbjct: 463 ISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSM 522
Query: 158 IVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIR 217
I + NG EA+ LF++M + + + T + V++A + G +E G R
Sbjct: 523 ISGYATNGQGFEAIDLFKKMSVAGIRPTQIT----FMVVLTACNYCGLVEEG-------R 571
Query: 218 RAGLGLTVPLG--------TALINMYSRCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAV 268
+ + V G + ++++ +R G ++ ++ + EEMP + W+S++ G
Sbjct: 572 KLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVA 631
Query: 269 HGRSREALRAFRDMREAGLRPDGAAYTAALVA 300
+G +A + E L P+ + L A
Sbjct: 632 NGYKAMGKKAAEKIIE--LEPENSVAYVQLSA 661
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 216 IRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREA 275
+++ L V + L+ MYSR G + + +F+EMP RN +W ++I G G +
Sbjct: 53 LKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTS 112
Query: 276 LRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVD 335
LR F M E DG ++ + + G + R+F +M + V +G +++
Sbjct: 113 LRFFDMMPE----RDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN 168
Query: 336 LLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGAC 369
G EA + +++ +++ T+L AC
Sbjct: 169 -----GYAEEALRLFKELNFSADAITLTTVLKAC 197
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 142/467 (30%), Positives = 218/467 (46%), Gaps = 47/467 (10%)
Query: 6 NLHATLIKTGQH---NNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIR 62
+HA +IKTG N + L L+C L SYA V P P + YN +I
Sbjct: 55 KIHADIIKTGFQPDLNISIKLLILHLKCGCL------SYARQVFDELPKPTLSAYNYMIS 108
Query: 63 HLALHSPTLATTLF-SHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXXXXXGFASNI- 120
H L M +G D +T ++ A I
Sbjct: 109 GYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIK 168
Query: 121 -------FVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSL 173
+ AL++ Y SG L A +F+ M ++ +++I + N G+ +A +
Sbjct: 169 CDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEI 228
Query: 174 FQQMQLGDPQV---------------PESTDGVMML-------------SVISAVSSLGA 205
F ++ D V S D + + SVI A S L +
Sbjct: 229 FNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTS 288
Query: 206 LELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITG 265
E+G VHA I ++G+ + +G++L++MY++CG I+ + +VF++M +NV +WTS+I G
Sbjct: 289 HEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDG 348
Query: 266 LAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYP 325
+G EAL F M+E + P+ + AL ACSH GLV+ G+ +FESM+ +Y + P
Sbjct: 349 YGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKP 408
Query: 326 MLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERV 385
+EHY C+VDL+GRAG L +AF+F MP +P+S IW LL +C H ++ LA A +
Sbjct: 409 KMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASEL 468
Query: 386 NELDP-HHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLS 431
+L+ G Y+ LSN Y +R M+ RI K G S
Sbjct: 469 FKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/314 (36%), Positives = 176/314 (56%), Gaps = 5/314 (1%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
+I ++I+ Y G + A LF+E D+ +WS LI+ + NG P EA +F +M
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYI-RRAGLGLTVPLGTALINMYSR 237
+ + D +M+ ++SA S +G EL V +Y+ +R + + ALI+M ++
Sbjct: 297 AKNVK----PDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAK 352
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
CG +DR+ K+FEEMP R++V++ S++ G+A+HG EA+R F M + G+ PD A+T
Sbjct: 353 CGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVI 412
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
L C LVE+G R FE MR +Y + +HY C+V+LL R G L EA++ ++ MP +
Sbjct: 413 LKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEA 472
Query: 358 NSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRN 417
++ W +LLG C H + +AE + EL+P G YVLLSN Y +R+
Sbjct: 473 HASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRD 532
Query: 418 SMRENRIVKEPGLS 431
M EN I K G S
Sbjct: 533 KMNENGITKICGRS 546
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 132/317 (41%), Gaps = 21/317 (6%)
Query: 45 VLLRFPIPDPTPYNTVIRHLALHSPTLAT-TLFSHMHRTGVTV-DHFTFPLIXXXXXXXX 102
V R P P +N +I+ + T ++ M RTG+ D +TFPL+
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 103 XXXXXXXX---XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIV 159
GF ++ V + ++ YG L A +F EMP+R+ SW+ L+V
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 160 CFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRA 219
+ +G EA S+F M PE G V V S + +R
Sbjct: 185 AYVKSGELEEAKSMFDLM-------PERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRD 237
Query: 220 GLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAF 279
+ T++I+ Y++ G + + +FEE +V W++LI G A +G+ EA + F
Sbjct: 238 IISY-----TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVF 292
Query: 280 RDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHY--GCMVDLL 337
+M ++PD + ACS G E +V + + HY ++D+
Sbjct: 293 SEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS--SHYVVPALIDMN 350
Query: 338 GRAGMLLEAFKFVEDMP 354
+ G + A K E+MP
Sbjct: 351 AKCGHMDRAAKLFEEMP 367
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 117/285 (41%), Gaps = 42/285 (14%)
Query: 142 LFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVS 201
+F+ +P W+ LI ++N E +S+ +M P+ +++ V S
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKV---CS 121
Query: 202 SLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTS 261
+ G + +G VH + R G V +GT+ ++ Y +C + + KVF EMP RN V+WT+
Sbjct: 122 NNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTA 181
Query: 262 LITGLAVHGRSREALRAFRDMREAGL---------------------------RPDGAAY 294
L+ G EA F M E L + D +Y
Sbjct: 182 LVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISY 241
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM- 353
T+ + + GG + +FE R GV + + ++ + G EAFK +M
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEAR---GVD--VRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 354 --PIKPNSVIWRTLLGACVNHNDLVLAEKAK----ERVNELDPHH 392
+KP+ I L+ AC L EK +R+N+ H+
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHY 341
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 8/178 (4%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
S+ +V ALI+ G ++ A LF+EMPQRDL S+ +++ +G +EA+ LF++M
Sbjct: 338 SSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKM 397
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLG-TALINMYS 236
+ + VP D V ++ +E G+ +R+ L P + ++N+ S
Sbjct: 398 -VDEGIVP---DEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLS 453
Query: 237 RCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
R G + + ++ + MP + W SL+ G ++HG + A R + E L P A
Sbjct: 454 RTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFE--LEPQSAG 509
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 219/461 (47%), Gaps = 32/461 (6%)
Query: 53 DPTPYNTVIRHLALHSPTLATT-LFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXX--X 109
D +N +I + T LF M R+ + D FTF I
Sbjct: 447 DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHS 506
Query: 110 XXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRD------------------- 150
G ASN V +LI+ Y G + A + QR
Sbjct: 507 SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQE 566
Query: 151 -LASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELG 209
SW+++I + +A LF +M ++ + D +V+ ++L + LG
Sbjct: 567 MCVSWNSIISGYVMKEQSEDAQMLFTRMM----EMGITPDKFTYATVLDTCANLASAGLG 622
Query: 210 IWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVH 269
+HA + + L V + + L++MYS+CG + S +FE+ R+ VTW ++I G A H
Sbjct: 623 KQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHH 682
Query: 270 GRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEH 329
G+ EA++ F M ++P+ + + L AC+H GL++ G F M+ +YG+ P L H
Sbjct: 683 GKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPH 742
Query: 330 YGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNH-NDLVLAEKAKERVNEL 388
Y MVD+LG++G + A + + +MP + + VIWRTLLG C H N++ +AE+A + L
Sbjct: 743 YSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRL 802
Query: 389 DPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNS 448
DP Y LLSN Y +R +MR ++ KEPG S V + +H F+ GD +
Sbjct: 803 DPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKA 862
Query: 449 HPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHDIQEEEKEH 489
HP+WEEI + L + +K + SS + ++ EE++
Sbjct: 863 HPRWEEIYEELGLIYSEMK----PFDDSSFVRGVEVEEEDQ 899
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 151/324 (46%), Gaps = 12/324 (3%)
Query: 50 PIPDPTPYNTVIRHLALHSPTLATT-LFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXX 108
P+ D +N+++ + +L + +F M R G+ D TF +I
Sbjct: 141 PVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGM 200
Query: 109 XX---XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNG 165
G +++ +AL++ Y ++ +F +P+++ SWS +I N
Sbjct: 201 QIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNN 260
Query: 166 YPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTV 225
+ AL F++MQ + V +S + SV+ + ++L L LG +HA+ ++
Sbjct: 261 LLSLALKFFKEMQKVNAGVSQS----IYASVLRSCAALSELRLGGQLHAHALKSDFAADG 316
Query: 226 PLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREA 285
+ TA ++MY++C ++ + +F+ + N ++ ++ITG + +AL F + +
Sbjct: 317 IVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS 376
Query: 286 GLRPDGAAYTAALVACSHGGLVEDGWRVFE-SMRSEYGVYPMLEHYGCMVDLLGRAGMLL 344
GL D + + AC+ + +G +++ +++S + + + +D+ G+ L
Sbjct: 377 GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA--IDMYGKCQALA 434
Query: 345 EAFKFVEDMPIKPNSVIWRTLLGA 368
EAF+ ++M + ++V W ++ A
Sbjct: 435 EAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 91/179 (50%), Gaps = 4/179 (2%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N +IN Y S + A F+ MP RD+ SW++++ + NG +++ +F M G
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDM--GREG 175
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
+ DG ++ S L LG+ +H + R G V +AL++MY++
Sbjct: 176 IE--FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACS 302
S++VF+ +P +N V+W+++I G + AL+ F++M++ + Y + L +C+
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 113/239 (47%), Gaps = 18/239 (7%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
FA++ V+ A ++ Y ++ A LFD + S++ +I ++ + +AL LF
Sbjct: 312 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFH 371
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMY 235
++ E + + V A + + L G+ ++ ++ L L V + A I+MY
Sbjct: 372 RLMSSGLGFDE----ISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMY 427
Query: 236 SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
+C ++ + +VF+EM R+ V+W ++I +G+ E L F M + + PD +
Sbjct: 428 GKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFG 487
Query: 296 AALVACSHGGLVEDGWRVFES-----MRSEYGVYPMLEHYGC-MVDLLGRAGMLLEAFK 348
+ L AC+ GG + G + S M S V GC ++D+ + GM+ EA K
Sbjct: 488 SILKACT-GGSLGYGMEIHSSIVKSGMASNSSV-------GCSLIDMYSKCGMIEEAEK 538
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 18/158 (11%)
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
+IN YS+ + ++ F MP R+VV+W S+++G +G S +++ F DM G+ D
Sbjct: 120 MINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFD 179
Query: 291 GAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGML---LEAF 347
G + L CS E ++ ++ GC D++ + +L +
Sbjct: 180 GRTFAIILKVCS----------FLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 348 KFVEDMPI-----KPNSVIWRTLLGACVNHNDLVLAEK 380
+FVE + + + NSV W ++ CV +N L LA K
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALK 267
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/334 (35%), Positives = 181/334 (54%), Gaps = 7/334 (2%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
+I + LI+ Y G + A LF EMP+++ SW+ LI + G AL LF++M
Sbjct: 243 KDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKM 302
Query: 178 -QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYS 236
LG PE S + A +S+ +L G +H Y+ R + + ++LI+MYS
Sbjct: 303 IALGVK--PEQ---FTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYS 357
Query: 237 RCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
+ GS++ S +VF + + V W ++I+ LA HG +ALR DM + ++P+
Sbjct: 358 KSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLV 417
Query: 296 AALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPI 355
L ACSH GLVE+G R FESM ++G+ P EHY C++DLLGRAG E + +E+MP
Sbjct: 418 VILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPF 477
Query: 356 KPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXV 415
+P+ IW +LG C H + L +KA + + +LDP Y+LLS+ Y +
Sbjct: 478 EPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKL 537
Query: 416 RNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSH 449
R M++ R+ KE +S + I++ V F D SH
Sbjct: 538 RGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSH 571
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 125/285 (43%), Gaps = 36/285 (12%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N++ N +++ Y SG L A +FD MP+RD+ SW+T+++ + +G EAL +++ +
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+ E + ++ + + + L+L H + AG V L ++I+ Y++C
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQ----LQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC 227
Query: 239 GSIDRSVKVFE-------------------------------EMPHRNVVTWTSLITGLA 267
G ++ + + F+ EMP +N V+WT+LI G
Sbjct: 228 GQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYV 287
Query: 268 VHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPML 327
G AL FR M G++P+ +++ L A + + G + M V P
Sbjct: 288 RQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYM-IRTNVRPNA 346
Query: 328 EHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNH 372
++D+ ++G L + + K + V W T++ A H
Sbjct: 347 IVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQH 391
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 46/237 (19%)
Query: 192 MMLSVISAVSSLGALELGIWVHAYIRRAGLGL-TVPLGTALINMYSRCGS-ID------- 242
++ S++ +L+ G W+H +++ G L LI MY +CG ID
Sbjct: 48 LLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQ 107
Query: 243 -----------------------RSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAF 279
R+ VF+ MP R+VV+W +++ G A G EAL +
Sbjct: 108 MHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFY 167
Query: 280 RDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYG---VYPMLEH--YGC-M 333
++ R +G++ + ++ L AC R + R +G V L + C +
Sbjct: 168 KEFRRSGIKFNEFSFAGLLTACVKS-------RQLQLNRQAHGQVLVAGFLSNVVLSCSI 220
Query: 334 VDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDP 390
+D + G + A + ++M +K + IW TL+ D+ AEK + E +P
Sbjct: 221 IDAYAKCGQMESAKRCFDEMTVK-DIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNP 276
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 129/399 (32%), Positives = 202/399 (50%), Gaps = 20/399 (5%)
Query: 42 AAAVLLRFPIPDPTPYNTVIRHLA---LHSPTLATTLFSHMHR-TGVTVDHFTFPLIXXX 97
A V P PD + V+ + L+ L LF MHR G+ D TF +
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALG--LFYAMHRGKGLVPDGSTFGTVLTA 274
Query: 98 XXXXXXXXXXXX---XXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASW 154
G SN+ V+++L++ YG GS+ A +F+ M +++ SW
Sbjct: 275 CGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSW 334
Query: 155 STLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHA 214
S L+ + NG +A+ +F++M E D +V+ A + L A+ LG +H
Sbjct: 335 SALLGGYCQNGEHEKAIEIFREM--------EEKDLYCFGTVLKACAGLAAVRLGKEIHG 386
Query: 215 -YIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSR 273
Y+RR G V + +ALI++Y + G ID + +V+ +M RN++TW ++++ LA +GR
Sbjct: 387 QYVRRGCFG-NVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGE 445
Query: 274 EALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCM 333
EA+ F DM + G++PD ++ A L AC H G+V++G F M YG+ P EHY CM
Sbjct: 446 EAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCM 505
Query: 334 VDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLV-LAEKAKERVNELDPHH 392
+DLLGRAG+ EA +E + ++ +W LLG C + D +AE+ +R+ EL+P +
Sbjct: 506 IDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKY 565
Query: 393 DGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLS 431
YVLLSN Y +R M + K G S
Sbjct: 566 HMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQS 604
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 129/257 (50%), Gaps = 15/257 (5%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF N F+ + L YG + A +FDEMP+ D+ W+ ++ F+ N EAL LF
Sbjct: 193 GFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLF 252
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M G VP DG +V++A +L L+ G +H + G+G V + ++L++M
Sbjct: 253 YAMHRGKGLVP---DGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDM 309
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y +CGS+ + +VF M +N V+W++L+ G +G +A+ FR+M E D +
Sbjct: 310 YGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE----KDLYCF 365
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEY---GVYPMLEHYGCMVDLLGRAGMLLEAFKFVE 351
L AC+ V R+ + + +Y G + + ++DL G++G + A +
Sbjct: 366 GTVLKACAGLAAV----RLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYS 421
Query: 352 DMPIKPNSVIWRTLLGA 368
M I+ N + W +L A
Sbjct: 422 KMSIR-NMITWNAMLSA 437
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 125/277 (45%), Gaps = 11/277 (3%)
Query: 115 GFASNIFVQNALINAYGSSG-SLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSL 173
G ++ V N+L++ Y G + +FD +D SW++++ + +AL +
Sbjct: 91 GLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEV 150
Query: 174 FQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALIN 233
F +M E T + S + A S LG + LG H + G + + L
Sbjct: 151 FVEMVSFGLDANEFT----LSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAY 206
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM-REAGLRPDGA 292
+Y + +VF+EMP +V+ WT++++ + + EAL F M R GL PDG+
Sbjct: 207 LYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGS 266
Query: 293 AYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVED 352
+ L AC + ++ G + + + G+ + ++D+ G+ G + EA +
Sbjct: 267 TFGTVLTACGNLRRLKQGKEIHGKLITN-GIGSNVVVESSLLDMYGKCGSVREARQVFNG 325
Query: 353 MPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELD 389
M K NSV W LLG + + EKA E E++
Sbjct: 326 MS-KKNSVSWSALLGGYCQNGE---HEKAIEIFREME 358
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 8/170 (4%)
Query: 209 GIWVHAYIRRAGLGLTVPLGTALINMYSRCG-SIDRSVKVFEEMPHRNVVTWTSLITGLA 267
GI HA++ ++GL +G +L+++Y + G + + +VF+ ++ ++WTS+++G
Sbjct: 80 GIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYV 139
Query: 268 VHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPML 327
+AL F +M GL + ++A+ ACS G V G R F + +G
Sbjct: 140 TGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG-RCFHGVVITHGFE--W 196
Query: 328 EHY--GCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDL 375
H+ + L G ++A + ++MP +P+ + W +L A + NDL
Sbjct: 197 NHFISSTLAYLYGVNREPVDARRVFDEMP-EPDVICWTAVLSA-FSKNDL 244
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 187/363 (51%), Gaps = 5/363 (1%)
Query: 72 ATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYG 131
A +++ MH GV D FTF + G +S I + NALI+AY
Sbjct: 373 AMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYS 432
Query: 132 SSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGV 191
+G + A LF+ +++L SW+ +I F +NG+P E L F L + +V D
Sbjct: 433 KNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSC--LLESEVRILPDAY 490
Query: 192 MMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEM 251
+ +++S S +L LG HAY+ R G +G ALINMYS+CG+I S++VF +M
Sbjct: 491 TLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQM 550
Query: 252 PHRNVVTWTSLITGLAVHGRSREALRAFRDMREAG-LRPDGAAYTAALVACSHGGLVEDG 310
++VV+W SLI+ + HG A+ ++ M++ G + PD A ++A L ACSH GLVE+G
Sbjct: 551 SEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEG 610
Query: 311 WRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVE--DMPIKPNSVIWRTLLGA 368
+F SM +GV ++H+ C+VDLLGRAG L EA V+ + I +W L A
Sbjct: 611 LEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSA 670
Query: 369 CVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEP 428
C H DL L + + + E + YV LSN Y R ++ +K+
Sbjct: 671 CAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQR 730
Query: 429 GLS 431
G S
Sbjct: 731 GCS 733
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 139/297 (46%), Gaps = 45/297 (15%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQR-DLASWSTLIVCFTNNGYPAEALSLFQQM 177
+++ L++A G + A +FD+MP+R D+A W+ +I +GY ++ LF++M
Sbjct: 122 DVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREM 181
Query: 178 -QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYS 236
+LG V G + I ++ G+L+ G VH+ + +AG + + ALI MY
Sbjct: 182 HKLG---VRHDKFG---FATILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYF 235
Query: 237 RCGSIDRSVKVFEE--MPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
C + + VFEE + R+ VT+ +I GLA R E+L FR M EA LRP +
Sbjct: 236 NCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRD-ESLLVFRKMLEASLRPTDLTF 294
Query: 295 TAALVACS--------HGGLVEDGWR--------------VFESMRSEYGVYPMLEH--- 329
+ + +CS HG ++ G+ FE + + V+ LE
Sbjct: 295 VSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDL 354
Query: 330 --YGCMVD-----LLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAE 379
+ M+ LG++ M +K + + +KP+ + +LL ++ + L + +
Sbjct: 355 VTWNTMISSYNQAKLGKSAM--SVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQ 409
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 163/435 (37%), Gaps = 69/435 (15%)
Query: 41 YAAAVLLRFPIPDPTP-YNTVI---RHLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXX 96
YA V + P D +N +I + H ++ LF MH+ GV D F F I
Sbjct: 141 YAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVE--LFREMHKLGVRHDKFGFATILS 198
Query: 97 XXXXXXXX--XXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDE--MPQRDLA 152
GF V NALI Y + + A +F+E + RD
Sbjct: 199 MCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQV 258
Query: 153 SWSTLIVCFTNNGYPA-EALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIW 211
+++ +I G+ E+L +F++M L P TD L+ +S + S +G
Sbjct: 259 TFNVVIDGLA--GFKRDESLLVFRKM-LEASLRP--TD----LTFVSVMGSCSCAAMGHQ 309
Query: 212 VHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGR 271
VH + G + A + MYS + KVFE + +++VTW ++I+
Sbjct: 310 VHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKL 369
Query: 272 SREALRAFRDMREAGLRPDGAAYTAALV------------AC------------------ 301
+ A+ ++ M G++PD + + L AC
Sbjct: 370 GKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALIS 429
Query: 302 --SHGGLVEDGWRVFE-SMR----SEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
S G +E +FE S+R S + H G + L R LLE+ ++
Sbjct: 430 AYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLES-----EVR 484
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNA----YXXXXXXX 410
I P++ TLL CV+ + L+L + V H L+ NA Y
Sbjct: 485 ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR---HGQFKETLIGNALINMYSQCGTIQ 541
Query: 411 XXXXVRNSMRENRIV 425
V N M E +V
Sbjct: 542 NSLEVFNQMSEKDVV 556
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 6/157 (3%)
Query: 161 FTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAG 220
T +G AL LF + P D + I+ L G VH Y R+G
Sbjct: 31 LTRSGENRNALKLFADVHRCTTLRP---DQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 221 LGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFR 280
L + L+++Y R G++ K F+E+ +V +WT+L++ G A F
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 281 DMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESM 317
M E R D A + A + C G E +F M
Sbjct: 148 KMPE---RDDVAIWNAMITGCKESGYHETSVELFREM 181
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 130/408 (31%), Positives = 203/408 (49%), Gaps = 40/408 (9%)
Query: 157 LIVCFTNNGYPAEALSLFQQMQL-GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAY 215
+I + N GY + LF QL GD Q AL+ VH +
Sbjct: 168 IIKSWRNEGYVVDLPRLFWIAQLCGDAQ---------------------ALQEAKVVHEF 206
Query: 216 IRRAGLGLT-VPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSRE 274
I + +G++ + ++I MYS CGS++ ++ VF MP RN+ TW +I A +G+ +
Sbjct: 207 IT-SSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGED 265
Query: 275 ALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMV 334
A+ F ++ G +PDG + AC G + +G FESM EYG+ P +EHY +V
Sbjct: 266 AIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLV 325
Query: 335 DLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDG 394
+L G L EA +FVE M +PN +W TL+ H DL+L ++ ++ V +LD
Sbjct: 326 KMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASR-- 381
Query: 395 DYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEE 454
L + V+ ++ R+ K P + ++ +GD S P+ E
Sbjct: 382 ---LNKESKAGLVPVKSSDLVKEKLQ--RMAKGPNYGIRYM-------AAGDISRPENRE 429
Query: 455 IMKFLVSVVDTIKLGGYAPNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIR 514
+ L S+ + + GY P + LHD+ +E K+ +L H+E+ A L R IR
Sbjct: 430 LYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIR 489
Query: 515 VIKNLRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
V+KNLR+C DCH+ +K +S I +++I RD RFHH G CSC ++W
Sbjct: 490 VMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
S+I N++I Y GS+ A+ +F+ MP+R+L +W +I CF NG +A+ F +
Sbjct: 214 SDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRF 273
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIW-VHAYIRRAGLGLTVPLGTALINMYS 236
+ Q DG M + A LG + G+ + + G+ + +L+ M +
Sbjct: 274 K----QEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLA 329
Query: 237 RCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHG 270
G +D +++ E M NV W +L+ VHG
Sbjct: 330 EPGYLDEALRFVESM-EPNVDLWETLMNLSRVHG 362
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 195/384 (50%), Gaps = 35/384 (9%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF + +NALI+ YG G + A HLF ++ + + SW++LI F + G EALSLF
Sbjct: 324 GFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLF 383
Query: 175 QQMQ--------------------------LGDP------QVPES---TDGVMMLSVISA 199
+++ GD Q+ S + V + ++S
Sbjct: 384 SELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSI 443
Query: 200 VSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTW 259
+ L AL LG +H ++ R + + + AL+NMY++CG + VFE + +++++W
Sbjct: 444 CAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISW 503
Query: 260 TSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRS 319
S+I G +HG + +AL F M +G PDG A A L ACSH GLVE G +F SM
Sbjct: 504 NSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSK 563
Query: 320 EYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAE 379
+G+ P EHY C+VDLLGR G L EA + V++MP++P + LL +C H ++ +AE
Sbjct: 564 RFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAE 623
Query: 380 KAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVV 439
+++ L+P G Y+LLSN Y VR ++ + K G S + + +
Sbjct: 624 GIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKK 683
Query: 440 HEFVSGDNSHPQWEEIMKFLVSVV 463
++F SG ++E I L +V
Sbjct: 684 YKFSSGSIVQSEFETIYPVLEDLV 707
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 114/285 (40%), Gaps = 38/285 (13%)
Query: 72 ATTLFSHMHRTGVTVDHFTFPLIXXXXXXXX---XXXXXXXXXXXXGFASNIFVQNALIN 128
A L+ M + G+T D + PLI G N+ V N L+
Sbjct: 142 ALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLT 201
Query: 129 AYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPEST 188
Y +G + A +LF EMP R+ SW+ +I F+ A+ +F+ MQ + + E T
Sbjct: 202 LYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVT 261
Query: 189 -------------------------------DGVMMLSVISAVSSLGALELGIWVHAYIR 217
G + S + L AL + VH Y+
Sbjct: 262 WTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVI 321
Query: 218 RAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALR 277
+ G +P ALI++Y + G + + +F ++ ++ + +W SLIT G+ EAL
Sbjct: 322 KGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALS 381
Query: 278 AFRDMRE----AGLRPDGAAYTAALVACSHGGLVEDGWRVFESMR 318
F ++ E ++ + +T+ + C+ G +D F M+
Sbjct: 382 LFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQ 426
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 7/196 (3%)
Query: 126 LINAYGSSGSLNLAVHLFDEMPQ---RDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDP 182
LI+ Y G L A ++F+ + DL W++++ ++G AL L++ M+
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMR---- 150
Query: 183 QVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSID 242
Q + DG ++ ++ A LG L H + + GL + + L+ +Y + G +
Sbjct: 151 QRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMG 210
Query: 243 RSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACS 302
+ +F EMP RN ++W +I G + A++ F M+ +PD +T+ L S
Sbjct: 211 DAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHS 270
Query: 303 HGGLVEDGWRVFESMR 318
G ED + F MR
Sbjct: 271 QCGKFEDVLKYFHLMR 286
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 186/353 (52%), Gaps = 8/353 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G S+I V NALI+ YG S L A +F+ M +RDL +W++++ G L+LF
Sbjct: 292 GSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALF 351
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGL----GLTVPLGTA 230
++M + D V + +V+ L +L G +H Y+ +GL + +
Sbjct: 352 ERMLCSGIR----PDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNS 407
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
L++MY +CG + + VF+ M ++ +W +I G V AL F M AG++PD
Sbjct: 408 LMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPD 467
Query: 291 GAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFV 350
+ L ACSH G + +G M + Y + P +HY C++D+LGRA L EA++
Sbjct: 468 EITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELA 527
Query: 351 EDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXX 410
PI N V+WR++L +C H + LA A +R++EL+P H G YVL+SN Y
Sbjct: 528 ISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYE 587
Query: 411 XXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVV 463
VR++MR+ + K PG S + + VH F +G+ +HP+++ I +L V+
Sbjct: 588 EVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVI 640
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 164/411 (39%), Gaps = 65/411 (15%)
Query: 14 TGQHNNPLSLRTFFLRCAELPSADTA---SYAAAVLLRFPI-------PDPTPYNTVIRH 63
+GQ + +R FL + P A T+ YA L+R + D YN +I
Sbjct: 78 SGQQIHGFMVRKGFLD--DSPRAGTSLVNMYAKCGLMRRAVLVFGGSERDVFGYNALISG 135
Query: 64 LALH-SPTLATTLFSHMHRTGVTVDHFTFP--LIXXXXXXXXXXXXXXXXXXXXGFASNI 120
++ SP A + M G+ D +TFP L GF S+
Sbjct: 136 FVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDC 195
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQRDLAS-WSTLIVCFTNNGYPAEALSLFQQMQL 179
+V + L+ +Y S+ A +FDE+P RD + W+ L+ ++ +AL +F +M+
Sbjct: 196 YVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMRE 255
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
V T + SV+SA + G ++ G +H + G G + + ALI+MY +
Sbjct: 256 EGVGVSRHT----ITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSK 311
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
++ + +FE M R++ TW S++ G L F M +G+RPD T L
Sbjct: 312 WLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLP 371
Query: 300 ACS-----------HG----------------------------GLVEDGWRVFESMRSE 320
C HG G + D VF+SMR +
Sbjct: 372 TCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVK 431
Query: 321 YGVY--PMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGAC 369
M+ YG V G + L+ F + +KP+ + + LL AC
Sbjct: 432 DSASWNIMINGYG--VQSCGE--LALDMFSCMCRAGVKPDEITFVGLLQAC 478
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 114/322 (35%), Positives = 177/322 (54%), Gaps = 6/322 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF ++ VQN +I+ Y GSL A F E+ +D+ S+++LI N P E+ LF
Sbjct: 338 GFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLF 397
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+M+ + P+ T +L V++A S L AL G H Y G + + AL++M
Sbjct: 398 HEMRTSGIR-PDIT---TLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDM 453
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y++CG +D + +VF+ M R++V+W +++ G +HG +EAL F M+E G+ PD
Sbjct: 454 YTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTL 513
Query: 295 TAALVACSHGGLVEDGWRVFESM-RSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
A L ACSH GLV++G ++F SM R ++ V P ++HY CM DLL RAG L EA+ FV M
Sbjct: 514 LAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKM 573
Query: 354 PIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXX 413
P +P+ + TLL AC + + L + +++ L + VLLSN Y
Sbjct: 574 PFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTE-SLVLLSNTYSAAERWEDAA 632
Query: 414 XVRNSMRENRIVKEPGLSVVHI 435
+R ++ ++K PG S V +
Sbjct: 633 RIRMIQKKRGLLKTPGYSWVDV 654
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 175/410 (42%), Gaps = 59/410 (14%)
Query: 22 SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLALHSP-TLATTLFSHMH 80
+L F+ +C EL A V P D +N +I +LH T LF M
Sbjct: 143 ALVDFYAKCGEL------EMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMR 196
Query: 81 RT-GVTVDHFT----FPLIXXXXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGS 135
R G++ + T FP + GF++++ V+ +++ Y S
Sbjct: 197 RIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRM-GFSNDLVVKTGILDVYAKSKC 255
Query: 136 LNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD--PQVPESTDGVMM 193
+ A +FD +++ +WS +I + N EA +F QM + D V G+++
Sbjct: 256 IIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLIL 315
Query: 194 LSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPH 253
+ + G L G VH Y +AG L + + +I+ Y++ GS+ + + F E+
Sbjct: 316 M----GCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGL 371
Query: 254 RNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACS----------- 302
++V+++ SLITG V+ R E+ R F +MR +G+RPD L ACS
Sbjct: 372 KDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSC 431
Query: 303 HGGLVEDGW------------------------RVFESMRSEYGVYPMLEHYGCMVDLLG 338
HG V G+ RVF++M V +G + LG
Sbjct: 432 HGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLG 491
Query: 339 RAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNEL 388
+ + L F +++ + P+ V +L AC +H+ LV ++ K+ N +
Sbjct: 492 KEALSL--FNSMQETGVNPDEVTLLAILSAC-SHSGLV--DEGKQLFNSM 536
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 125/250 (50%), Gaps = 9/250 (3%)
Query: 126 LINAYGSSGSLNLAVHLFDEMPQRDL--ASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
L Y S + LA H+FDE+P + +W +I + +N + +AL L+ +M +
Sbjct: 41 LTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVR 100
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
+ T V+ A + L A++ G +H+++ + + + TAL++ Y++CG ++
Sbjct: 101 PTKYTYPF----VLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEM 156
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREA-GLRPDGAAYTAALVACS 302
++KVF+EMP R++V W ++I+G ++H + + F DMR GL P+ + A
Sbjct: 157 AIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALG 216
Query: 303 HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIW 362
G + +G + + G L ++D+ ++ ++ A + V D+ K N V W
Sbjct: 217 RAGALREG-KAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYA-RRVFDLDFKKNEVTW 274
Query: 363 RTLLGACVNH 372
++G V +
Sbjct: 275 SAMIGGYVEN 284
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 147/329 (44%), Gaps = 15/329 (4%)
Query: 50 PIPDPTPYNTVIRHLALHS-PTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXX 108
P +P ++ +IR A + A L+ M +GV +T+P +
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 109 XX---XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNG 165
FA++++V AL++ Y G L +A+ +FDEMP+RD+ +W+ +I F+ +
Sbjct: 124 LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHC 183
Query: 166 YPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTV 225
+ + LF M+ D P + V M A+ GAL G VH Y R G +
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMF---PALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 226 PLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM--- 282
+ T ++++Y++ I + +VF+ +N VTW+++I G + +EA F M
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 283 -REAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAG 341
A + P A L+ C+ G + G R + G L ++ + G
Sbjct: 301 DNVAMVTP--VAIGLILMGCARFGDLSGG-RCVHCYAVKAGFILDLTVQNTIISFYAKYG 357
Query: 342 MLLEAFKFVEDMPIKPNSVIWRTLLGACV 370
L +AF+ ++ +K + + + +L+ CV
Sbjct: 358 SLCDAFRQFSEIGLK-DVISYNSLITGCV 385
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 178/322 (55%), Gaps = 8/322 (2%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
S+I ++ +LI+ Y ++L +F + WS +I N ++AL LF++M
Sbjct: 352 SDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRM 411
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
+ D + +T + S++ A ++L L + +H Y+ + G ++ T L+++YS+
Sbjct: 412 RREDVEPNIAT----LNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSK 467
Query: 238 CGSIDRSVKVF----EEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
CG+++ + K+F E+ ++VV W +LI+G +HG AL+ F +M +G+ P+
Sbjct: 468 CGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEIT 527
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+T+AL ACSH GLVE+G +F M Y HY C+VDLLGRAG L EA+ + +
Sbjct: 528 FTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTI 587
Query: 354 PIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXX 413
P +P S +W LL ACV H ++ L E A ++ EL+P + G+YVLL+N Y
Sbjct: 588 PFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDME 647
Query: 414 XVRNSMRENRIVKEPGLSVVHI 435
VR+ M + K+PG S + I
Sbjct: 648 KVRSMMENVGLRKKPGHSTIEI 669
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 147/350 (42%), Gaps = 27/350 (7%)
Query: 40 SYAAAVLLRFPIPDPTPYNTVIRHLALHSPTL-ATTLFSHMHRTGVTV--DHFTFPLIXX 96
+YA + P YN VIR A ++F M GV D +T+P +
Sbjct: 66 TYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAK 125
Query: 97 XXXXXXXXXXXXXX---XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLAS 153
F + +VQNAL+ Y + G + +A +FD M RD+ S
Sbjct: 126 AAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVIS 185
Query: 154 WSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTD--GVMMLSVISAVSSLGALELGIW 211
W+T+I + NGY +AL +F M V ES D ++S++ L LE+G
Sbjct: 186 WNTMISGYYRNGYMNDALMMFDWM------VNESVDLDHATIVSMLPVCGHLKDLEMGRN 239
Query: 212 VHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGR 271
VH + LG + + AL+NMY +CG +D + VF+ M R+V+TWT +I G G
Sbjct: 240 VHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGD 299
Query: 272 SREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVED-----GWRVFESMRSEYGVYPM 326
AL R M+ G+RP+ + + C V D GW V + + S+ +
Sbjct: 300 VENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETS 359
Query: 327 LEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLV 376
L M R + F P W ++ CV N+LV
Sbjct: 360 LIS---MYAKCKRVDLCFRVFSGASKYHTGP----WSAIIAGCV-QNELV 401
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 6/247 (2%)
Query: 130 YGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM-QLGDPQVPEST 188
Y G + A LF+EMPQ L S++ +I + G +A+S+F +M G VP
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVP--- 115
Query: 189 DGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVF 248
DG V A L +++LG+ VH I R+ G + AL+ MY G ++ + VF
Sbjct: 116 DGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVF 175
Query: 249 EEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVE 308
+ M +R+V++W ++I+G +G +AL F M + D A + L C H +E
Sbjct: 176 DVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLE 235
Query: 309 DGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGA 368
G R + E + +E +V++ + G + EA +FV D + + + W ++
Sbjct: 236 MG-RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEA-RFVFDRMERRDVITWTCMING 293
Query: 369 CVNHNDL 375
D+
Sbjct: 294 YTEDGDV 300
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 116/262 (44%), Gaps = 8/262 (3%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
I V+NAL+N Y G ++ A +FD M +RD+ +W+ +I +T +G AL L +
Sbjct: 249 LGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCR 308
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMY 235
MQ + + V + S++S + G +H + R + + + T+LI+MY
Sbjct: 309 LMQFEGVR----PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMY 364
Query: 236 SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
++C +D +VF + W+++I G + +AL F+ MR + P+ A
Sbjct: 365 AKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLN 424
Query: 296 AALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPI 355
+ L A + + + ++ G L+ +V + + G L A K +
Sbjct: 425 SLLPAYAALADLRQAMNI-HCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQE 483
Query: 356 KPNS---VIWRTLLGACVNHND 374
K S V+W L+ H D
Sbjct: 484 KHKSKDVVLWGALISGYGMHGD 505
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 181/345 (52%), Gaps = 29/345 (8%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
F SN FV AL++ YG S++ A LFDE+PQR+ W+ +I +T+ G EA+ L++
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 176 QMQLGDPQ---------VPESTDG--------------------VMMLSVISAVSSLGAL 206
M + + + + DG + +L+++SA S++GA
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAF 198
Query: 207 ELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGL 266
L +H+Y R + L + L+ Y RCGSI VF+ M R+VV W+SLI+
Sbjct: 199 RLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAY 258
Query: 267 AVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPM 326
A+HG + AL+ F++M A + PD A+ L ACSH GL ++ F+ M+ +YG+
Sbjct: 259 ALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRAS 318
Query: 327 LEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVN 386
+HY C+VD+L R G EA+K ++ MP KP + W LLGAC N+ ++ LAE A +
Sbjct: 319 KDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELL 378
Query: 387 ELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLS 431
++P + +YVLL Y +R M+E+ + PG S
Sbjct: 379 MVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 38/219 (17%)
Query: 151 LASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGI 210
L S + + + N G +AL+LF QM +P V L++ S ++ + LG
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMH-SSFALPLDAH-VFSLALKSCAAAFRPV-LGG 68
Query: 211 WVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHG 270
VHA+ ++ +G AL++MY +C S+ + K+F+E+P RN V W ++I+ G
Sbjct: 69 SVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCG 128
Query: 271 RSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHY 330
+ +EA+ + M + P+ +++ A + GLV +E G Y +E Y
Sbjct: 129 KVKEAVELYEAM---DVMPNESSFNAII-----KGLV----------GTEDGSYRAIEFY 170
Query: 331 GCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGAC 369
M++ F+F KPN + L+ AC
Sbjct: 171 RKMIE-----------FRF------KPNLITLLALVSAC 192
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/351 (33%), Positives = 176/351 (50%), Gaps = 11/351 (3%)
Query: 212 VHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGR 271
VH I + L + L+ MYS CG + + VFE+M +N+ TW +I A +G
Sbjct: 276 VHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGF 335
Query: 272 SREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYG 331
+A+ F +E G PDG + AC G V++G FESM +YG+ P +E Y
Sbjct: 336 GEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYV 395
Query: 332 CMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPH 391
+V++ G L EA +FVE MP++PN +W TL+ H +L L + E V LDP
Sbjct: 396 SLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDP- 454
Query: 392 HDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQ 451
V+ S E +K+ + + + EF +GD + P+
Sbjct: 455 ----------TRLNKQSREGFIPVKASDVEKESLKKRSGILHGVKSSMQEFRAGDTNLPE 504
Query: 452 WEEIMKFLVSVVDTIKLGGYAPNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRK 511
+E+ + L ++ + GY T LHDI +E KE L HSE++A A +L RK
Sbjct: 505 NDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRK 564
Query: 512 AIRVIKNLRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
VIKNLR+C DCH+ +K +S I +++I RD RFH G+C+C D+W
Sbjct: 565 PFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 76/147 (51%), Gaps = 6/147 (4%)
Query: 126 LINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVP 185
L+ Y + G N A +F++M +++L +W +I CF NG+ +A+ +F + + + +P
Sbjct: 295 LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK-EEGNIP 353
Query: 186 ESTDGVMMLSVISAVSSLGALELGIW-VHAYIRRAGLGLTVPLGTALINMYSRCGSIDRS 244
DG + + A LG ++ G+ + R G+ ++ +L+ MY+ G +D +
Sbjct: 354 ---DGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEA 410
Query: 245 VKVFEEMPHR-NVVTWTSLITGLAVHG 270
++ E MP NV W +L+ VHG
Sbjct: 411 LEFVERMPMEPNVDVWETLMNLSRVHG 437
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/315 (34%), Positives = 175/315 (55%), Gaps = 6/315 (1%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
I V N+LI+ YG G L +A +F E ++ +W+ +I + + +A++LF +M
Sbjct: 467 TISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRM- 524
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+ + P S + +++++ A + G+LE G +H YI + + L ALI+MY++C
Sbjct: 525 VSENFKPSS---ITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKC 581
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G +++S ++F+ ++ V W +I+G +HG A+ F M E+ ++P G + A L
Sbjct: 582 GHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALL 641
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
AC+H GLVE G ++F M +Y V P L+HY C+VDLL R+G L EA V MP P+
Sbjct: 642 SACTHAGLVEQGKKLFLKMH-QYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPD 700
Query: 359 SVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNS 418
VIW TLL +C+ H + + + ER DP +DG Y++L+N Y R
Sbjct: 701 GVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREM 760
Query: 419 MRENRIVKEPGLSVV 433
MRE+ + K G SVV
Sbjct: 761 MRESGVGKRAGHSVV 775
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G + NIFV + LI++Y S G NL+ +F + +RD+ W+++I +NG A +L F
Sbjct: 54 GLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFF 113
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYI-RRAGLGLTVPLGTALIN 233
M L Q P+ M V+SA + L +G +VH + + G +G + +
Sbjct: 114 FSMLL-SGQSPDHFTAPM---VVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVY 169
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGL---RPD 290
YS+CG + + VF+EMP R+VV WT++I+G +G S L M AG +P+
Sbjct: 170 FYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPN 229
Query: 291 GAAYTAALVACSHGGLVEDG 310
ACS+ G +++G
Sbjct: 230 PRTLECGFQACSNLGALKEG 249
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 6/240 (2%)
Query: 57 YNTVIR-HLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXX----XXXXXXXXXX 111
+N++I+ H + + F M +G + DHFT P++
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVL 152
Query: 112 XXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEAL 171
GF N V + + Y G L A +FDEMP RD+ +W+ +I NG L
Sbjct: 153 KHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGL 212
Query: 172 SLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTAL 231
+M V + + A S+LGAL+ G +H + + GL + + +++
Sbjct: 213 GYLCKMHSAGSDVDKPNPRTLECG-FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSM 271
Query: 232 INMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDG 291
+ YS+ G+ + F E+ ++ +WTS+I LA G E+ F +M+ G+ PDG
Sbjct: 272 FSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDG 331
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 131/280 (46%), Gaps = 8/280 (2%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR-DLASWSTLIVCFTNNGYPAEALSLF 174
F+ + V N+L++ Y L++A LF + + + +W+T++ + + + LF
Sbjct: 362 FSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELF 421
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+++Q + D SVIS+ S +GA+ LG +H Y+ + L LT+ + +LI++
Sbjct: 422 RKIQ----NLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDL 477
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y + G + + ++F E NV+TW ++I +S +A+ F M +P
Sbjct: 478 YGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITL 536
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
L+AC + G +E G + + +E L ++D+ + G LE + + D
Sbjct: 537 VTLLMACVNTGSLERGQMIHRYI-TETEHEMNLSLSAALIDMYAKCGH-LEKSRELFDAG 594
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDG 394
+ ++V W ++ H D+ A +++ E D G
Sbjct: 595 NQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTG 634
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 130/308 (42%), Gaps = 37/308 (12%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G AS+ FVQ+++ + Y SG+ + A F E+ D+ SW+++I +G E+ +F
Sbjct: 260 GLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMF 319
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+MQ DGV++ +I+ + + + G H ++ R L + +L++M
Sbjct: 320 WEMQ----NKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSM 375
Query: 235 YSRCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
Y + + + K+F + N W +++ G + + FR ++ G+ D A+
Sbjct: 376 YCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSAS 435
Query: 294 YTAALVACSHGGLVEDG-----WRVFESMRSEYGVY-PMLEHYGCMVDLLGRAGMLLEA- 346
T+ + +CSH G V G + V S+ V +++ YG M DL M EA
Sbjct: 436 ATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEAD 495
Query: 347 -------------------------FKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKA 381
F + KP+S+ TLL ACVN L +
Sbjct: 496 TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMI 555
Query: 382 KERVNELD 389
+ E +
Sbjct: 556 HRYITETE 563
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 163/308 (52%), Gaps = 3/308 (0%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G + V N LI Y + + LF+++ + L SW+++I +G + A +F
Sbjct: 377 GLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVF 436
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
QM L +P D + + S+++ S L L LG +H Y R + TALI+M
Sbjct: 437 HQMMLTGGLLP---DAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDM 493
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y++CG+ ++ VF+ + TW S+I+G ++ G AL + +MRE GL+PD +
Sbjct: 494 YAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITF 553
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
L AC+HGG V++G F +M E+G+ P L+HY MV LLGRA + EA + M
Sbjct: 554 LGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMD 613
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
IKP+S +W LL AC+ H +L + E ++ LD + G YVL+SN Y
Sbjct: 614 IKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVR 673
Query: 415 VRNSMREN 422
VRN M++N
Sbjct: 674 VRNMMKDN 681
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 9/216 (4%)
Query: 74 TLFSHMHRTGVTVDHFTFPLIXXXXXXX-----XXXXXXXXXXXXXGFASNIFVQNALIN 128
T+F + R+ +T +HFT + G ++V+ +L+N
Sbjct: 34 TIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLN 93
Query: 129 AYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPEST 188
Y G + A LFDEMP+RD W+ LI ++ NGY +A LF M L P +T
Sbjct: 94 LYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVM-LQQGFSPSAT 152
Query: 189 DGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVF 248
+++++ G + G VH ++GL L + ALI+ YS+C + + +F
Sbjct: 153 T---LVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLF 209
Query: 249 EEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE 284
EM ++ V+W ++I + G EA+ F++M E
Sbjct: 210 REMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFE 245
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 148/351 (42%), Gaps = 25/351 (7%)
Query: 22 SLRTFFLRCAELPSADTASYAAAVLLR-FPIPDPTPYNTVIRHLALHS-PTLATTLFSHM 79
+L +F+ +CAEL SA+ VL R +NT+I + A T+F +M
Sbjct: 191 ALISFYSKCAELGSAE-------VLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM 243
Query: 80 HRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLA 139
V + T I G ++I V +L+ AY G L A
Sbjct: 244 FEKNVEISPVT---IINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSA 300
Query: 140 VHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISA 199
L+ Q + ++++ C+ G A+ F + + Q+ D V ++ ++
Sbjct: 301 ERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTR----QLCMKIDAVALVGILHG 356
Query: 200 VSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTW 259
+++G+ +H Y ++GL + LI MYS+ ++ + +FE++ +++W
Sbjct: 357 CKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISW 416
Query: 260 TSLITGLAVHGRSREALRAFRDMR-EAGLRPDGAAYTAALVACSHGGLVEDGWRVFE-SM 317
S+I+G GR+ A F M GL PD + L CS + G + ++
Sbjct: 417 NSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTL 476
Query: 318 RSEYGVYPMLEHYGC--MVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL 366
R+ + E++ C ++D+ + G ++A + + P + W +++
Sbjct: 477 RNNFEN----ENFVCTALIDMYAKCGNEVQAESVFKSIK-APCTATWNSMI 522
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 10/189 (5%)
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
V+NALI+ Y L A LF EM + SW+T+I ++ +G EA+++F+ M +
Sbjct: 188 VKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKN 247
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSI 241
++ V +++++SA S L H + + G+ + + T+L+ YSRCG +
Sbjct: 248 VEISP----VTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCL 297
Query: 242 DRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVAC 301
+ +++ ++V TS+++ A G A+ F R+ ++ D A L C
Sbjct: 298 VSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGC 357
Query: 302 SHGGLVEDG 310
++ G
Sbjct: 358 KKSSHIDIG 366
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
Query: 212 VHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGR 271
V ++ ++GL V + T+L+N+Y + G + + +F+EMP R+ V W +LI G + +G
Sbjct: 72 VQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGY 131
Query: 272 SREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYG 331
+A + F M + G P L C G V G R + ++ G+ +
Sbjct: 132 ECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG-RSVHGVAAKSGLELDSQVKN 190
Query: 332 CMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGA 368
++ + L A +M K ++V W T++GA
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDK-STVSWNTMIGA 226
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 176/304 (57%), Gaps = 6/304 (1%)
Query: 120 IFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
I +NALI + +G + A +FD+ +D+ SW+ +I + + P AL LF++M +
Sbjct: 371 IASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREM-I 429
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
QV D + M+SV SA+SSLG+LE G H Y+ + + L A+I+MY++CG
Sbjct: 430 SSSQVK--PDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCG 487
Query: 240 SIDRSVKVFEEMPHRNVVT---WTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTA 296
SI+ ++ +F + + + T W ++I G A HG ++ AL + D++ ++P+ +
Sbjct: 488 SIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVG 547
Query: 297 ALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIK 356
L AC H GLVE G FESM+S++G+ P ++HYGCMVDLLG+AG L EA + ++ MP+K
Sbjct: 548 VLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVK 607
Query: 357 PNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVR 416
+ +IW LL A H ++ +AE A + +DP H G V+LSN Y VR
Sbjct: 608 ADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVR 667
Query: 417 NSMR 420
MR
Sbjct: 668 EEMR 671
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 12/165 (7%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N +++ Y S L A+ LFD MP+R S++TLI + N +EA+ LF++M+
Sbjct: 111 NIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIM 170
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLT----VPLGTALINMYSRCG 239
+ E V + +VISA S LG GIW ++ + L V + T L++MY C
Sbjct: 171 LNE----VTLATVISACSHLG----GIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCL 222
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE 284
+ + K+F+EMP RN+VTW ++ G + G +A F + E
Sbjct: 223 CLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITE 267
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 131/326 (40%), Gaps = 73/326 (22%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N+ N ++N Y +G + A LFD++ ++D+ SW T+I EAL + +M
Sbjct: 238 NLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEML 297
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYS-- 236
+ E VMM+ ++SA + G+ +H I + G L +I+ Y+
Sbjct: 298 RCGMKPSE----VMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVS 353
Query: 237 -----------------------------RCGSIDRSVKVFEEMPHRNVVTWTSLITGLA 267
+ G ++++ +VF++ +++ +W ++I+G A
Sbjct: 354 NDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYA 413
Query: 268 VHGRSREALRAFRDM-REAGLRPDGAAYTAALVACSHGGLVEDGWRVFE----------- 315
+ AL FR+M + ++PD + A S G +E+G R +
Sbjct: 414 QSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPND 473
Query: 316 --------------SMRSEYGVYPMLEHYG-----------CMVDLLGRAGMLLEAFKFV 350
S+ + ++ ++ C G A + L+ + +
Sbjct: 474 NLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDL 533
Query: 351 EDMPIKPNSVIWRTLLGACVNHNDLV 376
+ +PIKPNS+ + +L AC H LV
Sbjct: 534 QSLPIKPNSITFVGVLSACC-HAGLV 558
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 45/234 (19%)
Query: 193 MLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC-------------G 239
++S + + +S + G +H + ++GL + +++NMY++C
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 240 SIDRS------------------VKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRD 281
+D + +K+F+ MP R+ V++T+LI G A + + EA+ FR+
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 282 MREAGLRPDGAAYTAALVACSHGGLVEDGWRVFES------MRSEYGVYPMLEHYGCMVD 335
MR G+ + + ACSH G + D R+ +S + V L H C+
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDC-RMLQSLAIKLKLEGRVFVSTNLLHMYCLCL 222
Query: 336 LLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELD 389
L +A K ++MP + N V W +L + AE+ +++ E D
Sbjct: 223 CLK------DARKLFDEMP-ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKD 269
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 194/395 (49%), Gaps = 10/395 (2%)
Query: 44 AVLLRFPIPDPTPYNTVIRHLALHS-PTLATTLFSHMHR-TGVTVDHFTFPLIXXXXXXX 101
+V P + +N +I + + + LF M R + V D FT PLI
Sbjct: 88 SVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSAS 147
Query: 102 XXXXX---XXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLI 158
GF+S++FV +AL+ Y G L A LFD+MP RD ++ +
Sbjct: 148 REAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMF 207
Query: 159 VCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRR 218
+ G L++F++M + D V+M+S++ A LGAL+ G VH + R
Sbjct: 208 GGYVQQGEAMLGLAMFREMGYSGFAL----DSVVMVSLLMACGQLGALKHGKSVHGWCIR 263
Query: 219 AGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRA 278
L + LG A+ +MY +C +D + VF M R+V++W+SLI G + G + +
Sbjct: 264 RCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKL 323
Query: 279 FRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLG 338
F +M + G+ P+ + L AC+HGGLVE W F M+ EY + P L+HY + D +
Sbjct: 324 FDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ-EYNIVPELKHYASVADCMS 382
Query: 339 RAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVL 398
RAG+L EA KF+EDMP+KP+ + +L C + ++ + E+ + +L P YV
Sbjct: 383 RAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVT 442
Query: 399 LSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVV 433
L+ Y +R M+E +I K PG S +
Sbjct: 443 LAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 170/317 (53%), Gaps = 4/317 (1%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDE-MPQRDLASWSTLIVCFTNNGYPAEALSLF 174
+ N + + LI Y + ++ +FD+ + + D+A W+++I F +N +AL LF
Sbjct: 447 ISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILF 506
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
++M P T +V+S+ S L +L G H + ++G + TAL +M
Sbjct: 507 RRMHQTAVLCPNETS---FATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDM 563
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y +CG ID + + F+ + +N V W +I G +GR EA+ +R M +G +PDG +
Sbjct: 564 YCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITF 623
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
+ L ACSH GLVE G + SM+ +G+ P L+HY C+VD LGRAG L +A K E P
Sbjct: 624 VSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATP 683
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
K +SV+W LL +C H D+ LA + E++ LDP YVLLSN Y
Sbjct: 684 YKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAA 743
Query: 415 VRNSMRENRIVKEPGLS 431
++ M +NR+ K PG S
Sbjct: 744 LQGLMNKNRVHKTPGQS 760
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 98/181 (54%), Gaps = 5/181 (2%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
+++ NA + G L A +FD MP+RD+ SW+ +I G+ +AL ++++M
Sbjct: 71 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM- 129
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+ D +P + SV+SA S + G+ H + GL + +G AL++MY++C
Sbjct: 130 VCDGFLPSR---FTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKC 186
Query: 239 GSI-DRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
G I D V+VFE + N V++T++I GLA + EA++ FR M E G++ D +
Sbjct: 187 GFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNI 246
Query: 298 L 298
L
Sbjct: 247 L 247
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 124/268 (46%), Gaps = 22/268 (8%)
Query: 115 GFASNIFVQNALINAYGSSGSL-NLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSL 173
G NIFV NAL++ Y G + + V +F+ + Q + S++ +I EA+ +
Sbjct: 168 GLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQM 227
Query: 174 FQQMQLGDPQVPESTDGVMMLSVIS---------AVSSLGALELGIWVHAYIRRAGLGLT 224
F+ M QV D V + +++S ++S + ELG +H R G G
Sbjct: 228 FRLMCEKGVQV----DSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGD 283
Query: 225 VPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE 284
+ L +L+ +Y++ ++ + +F EMP NVV+W +I G RS +++ MR+
Sbjct: 284 LHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRD 343
Query: 285 AGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLL 344
+G +P+ + L AC G VE G R+F S+ P + + M+
Sbjct: 344 SGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ-----PSVSAWNAMLSGYSNYEHYE 398
Query: 345 EA---FKFVEDMPIKPNSVIWRTLLGAC 369
EA F+ ++ +KP+ +L +C
Sbjct: 399 EAISNFRQMQFQNLKPDKTTLSVILSSC 426
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 123/254 (48%), Gaps = 8/254 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF N +++ A SG + +F +PQ +++W+ ++ ++N + EA+S F
Sbjct: 345 GFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNF 404
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+QMQ + + ++T V ++S+ + L LE G +H + R + + + LI +
Sbjct: 405 RQMQFQNLKPDKTTLSV----ILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAV 460
Query: 235 YSRCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVHGRSREALRAFRDMRE-AGLRPDGA 292
YS C ++ S +F++ + ++ W S+I+G + +AL FR M + A L P+
Sbjct: 461 YSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNET 520
Query: 293 AYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVED 352
++ L +CS + G R F + + G + D+ + G + A +F D
Sbjct: 521 SFATVLSSCSRLCSLLHG-RQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFF-D 578
Query: 353 MPIKPNSVIWRTLL 366
++ N+VIW ++
Sbjct: 579 AVLRKNTVIWNEMI 592
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 15/227 (6%)
Query: 53 DPTPYNTVI---RHLALHSPTLATTLFSHMHRTGVTV-DHFTFPLIXXXXXXXXXXXXXX 108
D +N++I RH L T A LF MH+T V + +F +
Sbjct: 482 DIACWNSMISGFRHNML--DTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGR 539
Query: 109 X---XXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNG 165
G+ S+ FV+ AL + Y G ++ A FD + +++ W+ +I + +NG
Sbjct: 540 QFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNG 599
Query: 166 YPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRA-GLGLT 224
EA+ L+++M E DG+ +SV++A S G +E G+ + + ++R G+
Sbjct: 600 RGDEAVGLYRKM----ISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPE 655
Query: 225 VPLGTALINMYSRCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVHG 270
+ +++ R G ++ + K+ E P++ + V W L++ VHG
Sbjct: 656 LDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHG 702
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 180/350 (51%), Gaps = 8/350 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF S V N+ I Y +L A F+++ R++ SW+ +I F NG+ EAL +F
Sbjct: 402 GFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF 461
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+ +P +L+ I+ + +++ G HA++ + GL + +AL++M
Sbjct: 462 --LSAAAETMPNEYTFGSVLNAIAFAEDI-SVKQGQRCHAHLLKLGLNSCPVVSSALLDM 518
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y++ G+ID S KVF EM +N WTS+I+ + HG + F M + + PD +
Sbjct: 519 YAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTF 578
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
+ L AC+ G+V+ G+ +F M Y + P EHY CMVD+LGRAG L EA + + ++P
Sbjct: 579 LSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVP 638
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
P + +++LG+C H ++ + K E E+ P G YV + N Y
Sbjct: 639 GGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAE 698
Query: 415 VRNSMRENRIVKEPGLSVVHIDQ-----VVHEFVSGDNSHPQWEEIMKFL 459
+R +MR+ + KE G S + + + F SGD SHP+ +EI + +
Sbjct: 699 IRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMV 748
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 133/264 (50%), Gaps = 14/264 (5%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF S + V NA++ Y +G + A+ +F+ + D+ SW+T++ F +N AL+
Sbjct: 106 GFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFV 162
Query: 175 QQMQLGDPQVPESTDGVMMLSVIS-AVSSLGALELGIWVHAYIRRAGLGLTVPLGTALIN 233
+M+ D + +S V S G L LG+ + + + + GL + +G + I
Sbjct: 163 VRMKSAGVVF----DAFTYSTALSFCVGSEGFL-LGLQLQSTVVKTGLESDLVVGNSFIT 217
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGR-SREALRAFRDMREAGLRPDGA 292
MYSR GS + +VF+EM +++++W SL++GL+ G EA+ FRDM G+ D
Sbjct: 218 MYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHV 277
Query: 293 AYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVED 352
++T+ + C H ++ R + + G +LE ++ + G +LEA K V
Sbjct: 278 SFTSVITTCCHETDLKLA-RQIHGLCIKRGYESLLEVGNILMSRYSKCG-VLEAVKSVFH 335
Query: 353 MPIKPNSVIWRTLLGACVNHNDLV 376
+ N V W T++ + N +D V
Sbjct: 336 QMSERNVVSWTTMISS--NKDDAV 357
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 167/380 (43%), Gaps = 28/380 (7%)
Query: 6 NLHATLIKTGQHNNPL---SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIR 62
L +T++KTG ++ + S T + R A V D +N+++
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARR------VFDEMSFKDMISWNSLLS 248
Query: 63 HLALHSPT--LATTLFSHMHRTGVTVDHFTFPLIXXX---XXXXXXXXXXXXXXXXXGFA 117
L+ A +F M R GV +DH +F + G+
Sbjct: 249 GLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYE 308
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
S + V N L++ Y G L +F +M +R++ SW+T+I + +A+S+F M
Sbjct: 309 SLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNM 363
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
+ D P + V + +I+AV ++ G+ +H + G +G + I +Y++
Sbjct: 364 RF-DGVYP---NEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAK 419
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
+++ + K FE++ R +++W ++I+G A +G S EAL+ F A P+ + +
Sbjct: 420 FEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSV 478
Query: 298 L--VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPI 355
L +A + V+ G R + + G+ ++D+ + G + E+ K +M
Sbjct: 479 LNAIAFAEDISVKQGQRCHAHLL-KLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQ 537
Query: 356 KPNSVIWRTLLGACVNHNDL 375
K N +W +++ A +H D
Sbjct: 538 K-NQFVWTSIISAYSSHGDF 556
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 109/233 (46%), Gaps = 15/233 (6%)
Query: 138 LAVHLFDEMPQRD-LASWSTLIVCFTNNGYPAEALSLFQQ-MQLGDPQVPESTDGVMMLS 195
+A LFD QR+ S + I PA ALS+F++ +QLG D V +
Sbjct: 26 IAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLG--YFGRHMDEVTLCL 83
Query: 196 VISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRN 255
+ A G L+ G +H + +G V + A++ MY + G D ++ +FE + +
Sbjct: 84 ALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPD 141
Query: 256 VVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVAC--SHGGLVEDGWRV 313
VV+W ++++G ++ AL M+ AG+ D Y+ AL C S G L+ G ++
Sbjct: 142 VVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLL--GLQL 196
Query: 314 FESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL 366
+S + G+ L + + R+G A + ++M K + + W +LL
Sbjct: 197 -QSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK-DMISWNSLL 247
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 192/375 (51%), Gaps = 45/375 (12%)
Query: 196 VISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRN 255
+ + ++L +LE VH + ++ L +I+M+ C SI + +VF+ M ++
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKD 301
Query: 256 VVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFE 315
+ +W ++ + +G +AL F +M + GL+P+ + +AC+ G +E+ + F+
Sbjct: 302 MDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFD 361
Query: 316 SMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDL 375
SM++E+G+ P EHY ++ +LG+ G L+EA +++ D+P +P + W + H D+
Sbjct: 362 SMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDI 421
Query: 376 VLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHI 435
L + +E + ++DP S A N+I P S
Sbjct: 422 DLEDYMEELMVDVDP---------SKAVI-----------------NKIPTPPPKSFKET 455
Query: 436 DQVVHEFVSGDNSHPQWEEIMKF--LVSVVDTIKLGG------YAPNTSSVLHDIQEEEK 487
+ V + I++F L D K Y P+T VLHDI +E K
Sbjct: 456 NMVTSK-----------SRILEFRNLTFYKDEAKEMAAKKGVVYVPDTRFVLHDIDQEAK 504
Query: 488 EHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFMKHVSGIFDKDIIIRDRNR 547
E +L YHSE+LA+A+ ++ RK + +IKNLR+C DCH+F+K +S I + +I+RD R
Sbjct: 505 EQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKR 564
Query: 548 FHHFSKGSCSCGDFW 562
FHHF G CSCGD+W
Sbjct: 565 FHHFKDGKCSCGDYW 579
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 71/157 (45%), Gaps = 6/157 (3%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
F + + N +I+ +G S+ A +FD M +D+ SW ++ +++NG +AL LF+
Sbjct: 267 FRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFE 326
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRA-GLGLTVPLGTALINM 234
+M + E T L+V A +++G +E ++ G+ ++ +
Sbjct: 327 EMTKHGLKPNEET----FLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGV 382
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVT-WTSLITGLAVHG 270
+CG + + + ++P W ++ +HG
Sbjct: 383 LGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHG 419
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 109/317 (34%), Positives = 176/317 (55%), Gaps = 9/317 (2%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N FV + +++ Y G ++ A +F + RDL W+TLI + NGY +A+ F MQ
Sbjct: 207 NAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ 266
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
G+ P D V + S++SA + G L++G VH+ I G+ L + ALI+MY++C
Sbjct: 267 -GEGYEP---DAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKC 322
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G ++ + VFE + R+V S+I+ LA+HG+ +EAL F M L+PD + A L
Sbjct: 323 GDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVL 382
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
AC HGG + +G ++F M+++ V P ++H+GC++ LLGR+G L EA++ V++M +KPN
Sbjct: 383 TACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPN 441
Query: 359 SVIWRTLLGACVNHNDLVLAEKAKERVNE----LDPHHDGDYVLLSNAYXXXXXXXXXXX 414
+ LLGAC H D +AE+ + + + + + +SN Y
Sbjct: 442 DTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEA 501
Query: 415 VRNSMRENRIVKEPGLS 431
+R M + + K PGLS
Sbjct: 502 LRVEMEKRGLEKSPGLS 518
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 149/383 (38%), Gaps = 82/383 (21%)
Query: 58 NTVIRHLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXX----XXXXXXXXXXXXXX 113
N + H++ SP A L+ + R GV + PLI
Sbjct: 16 NLIKNHISRGSPIQALVLYGGIRRRGVYFPGWV-PLILRACACVVPRVVLGKLLHSESIK 74
Query: 114 XGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSL 173
G S++ V ++LI+ YG G + A +FDEMP+R++A+W+ +I + +NG A L
Sbjct: 75 FGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGL 134
Query: 174 FQQMQLGDPQVPESTDGVMMLSVISAVSSLGA-LELGIWVHAYIRRAGLGLTVPLGTALI 232
F+++ + V + I + G +E+ + R V + ++
Sbjct: 135 FEEISVCRNTV----------TWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVML 184
Query: 233 NMYSRCGSIDRSVKVFEEMPHRN-------------------------------VVTWTS 261
+Y ++ + K FE++P +N +V W +
Sbjct: 185 GVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNT 244
Query: 262 LITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEY 321
LI G A +G S +A+ AF +M+ G PD ++ L AC+ G ++ G R S+ +
Sbjct: 245 LIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVG-REVHSLINHR 303
Query: 322 GVYPMLEHYGCMVDLLGRAGML----------------------------------LEAF 347
G+ ++D+ + G L LE F
Sbjct: 304 GIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMF 363
Query: 348 KFVEDMPIKPNSVIWRTLLGACV 370
+E + +KP+ + + +L ACV
Sbjct: 364 STMESLDLKPDEITFIAVLTACV 386
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 11/212 (5%)
Query: 155 STLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHA 214
S LI + G P +AL L+ ++ P G + L + + + + LG +H+
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFP----GWVPLILRACACVVPRVVLGKLLHS 70
Query: 215 YIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSRE 274
+ G+ V +G++LI+MY +CG + + KVF+EMP RNV TW ++I G +G +
Sbjct: 71 ESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNG---D 127
Query: 275 ALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMV 334
A+ A E + + + + +E +FE M E ++ + M+
Sbjct: 128 AVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFE---LKNVKAWSVML 184
Query: 335 DLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL 366
+ + +A KF ED+P K N+ +W ++
Sbjct: 185 GVYVNNRKMEDARKFFEDIPEK-NAFVWSLMM 215
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 5/173 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G N FV NALI+ Y G L A +F+ + R +A +++I C +G EAL +F
Sbjct: 304 GIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMF 363
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M+ D + D + ++V++A G L G+ + + ++ + V LI++
Sbjct: 364 STMESLDLK----PDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHL 419
Query: 235 YSRCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVHGRSREALRAFRDMREAG 286
R G + + ++ +EM + N +L+ VH + A + + + AG
Sbjct: 420 LGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAG 472
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 167/311 (53%), Gaps = 6/311 (1%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N +++ Y S G++ LA H F++ P++ SW+++I + N EA+ LF +M +
Sbjct: 347 NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEG-- 404
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
E D + S++SA + L L LG+ +H + + + VP+ ALI MYSRCG I
Sbjct: 405 --EKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIME 461
Query: 244 SVKVFEEMP-HRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACS 302
S ++F+EM R V+TW ++I G A HG + EAL F M+ G+ P + + L AC+
Sbjct: 462 SRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACA 521
Query: 303 HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIW 362
H GLV++ F SM S Y + P +EHY +V++ G EA + MP +P+ +W
Sbjct: 522 HAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVW 581
Query: 363 RTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMREN 422
LL AC +N++ LA A E ++ L+P YVLL N Y VR +M
Sbjct: 582 GALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESK 641
Query: 423 RIVKEPGLSVV 433
RI KE G S V
Sbjct: 642 RIKKERGSSWV 652
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 108/261 (41%), Gaps = 49/261 (18%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
F N+ N++I AY G + A LFD+M RD SW+T+I + + +A +LF
Sbjct: 277 FCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFS 336
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMY 235
+M D H++ +++ Y
Sbjct: 337 EMPNRD------------------------------AHSW-------------NMMVSGY 353
Query: 236 SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
+ G+++ + FE+ P ++ V+W S+I + +EA+ F M G +PD T
Sbjct: 354 ASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLT 413
Query: 296 AALVACSHGGLVEDGWRVFESMRS--EYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+ L A + GLV R+ M V P + + ++ + R G ++E+ + ++M
Sbjct: 414 SLLSAST--GLV--NLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEM 469
Query: 354 PIKPNSVIWRTLLGACVNHND 374
+K + W ++G H +
Sbjct: 470 KLKREVITWNAMIGGYAFHGN 490
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 118/292 (40%), Gaps = 39/292 (13%)
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLG 180
F N +I+ Y + + A+ LF++MP+R+ SWS +I F NG A+ LF++M +
Sbjct: 137 FSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVK 196
Query: 181 DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRR--AGLGLTVPLGTALINMYSRC 238
D + ++++ + L WV +G V LI Y +
Sbjct: 197 DSSP--------LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQR 248
Query: 239 GSIDRSVKVFEEMPH---------------RNVVTWTSLITGLAVHGRSREALRAFRDMR 283
G ++ + +F+++P +NVV+W S+I G A F M+
Sbjct: 249 GQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMK 308
Query: 284 EAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGML 343
+ D ++ + H +ED + +F M + + MV G +
Sbjct: 309 DR----DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDA-----HSWNMMVSGYASVGNV 359
Query: 344 LEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVN----ELDPH 391
A + E P K ++V W +++ A + D A R+N + DPH
Sbjct: 360 ELARHYFEKTPEK-HTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPH 410
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 116/285 (40%), Gaps = 36/285 (12%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N +N SG + A +F+++ R+ +W+T+I + +A LF M P+
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM----PK 99
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
D V ++IS S G + + T +I+ Y++ I
Sbjct: 100 ----RDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNT-MISGYAKNRRIGE 154
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM----------REAGLRPDGAA 293
++ +FE+MP RN V+W+++ITG +G A+ FR M AGL +
Sbjct: 155 ALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERL 214
Query: 294 YTAALVACSHGGLV---EDGWRVFESMRSEYGVYPMLEHYGCMVDLL------GRAGMLL 344
AA V +G LV ED + ++ YG +E C+ D + G
Sbjct: 215 SEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFR 274
Query: 345 EAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELD 389
E F N V W +++ A + D+V A +++ + D
Sbjct: 275 ERF--------CKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRD 311
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 173/331 (52%), Gaps = 5/331 (1%)
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
V+N LI Y L A+ +F + + L +W+++I + EA L ++M +
Sbjct: 317 VRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAG 376
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYI-RRAGLGLTVPLGTALINMYSRCGS 240
Q P S + + S++ + + L+ G H YI RR L +L+++Y++ G
Sbjct: 377 FQ-PNS---ITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGK 432
Query: 241 IDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVA 300
I + +V + M R+ VT+TSLI G G AL F++M +G++PD A L A
Sbjct: 433 IVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSA 492
Query: 301 CSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSV 360
CSH LV +G R+F M+ EYG+ P L+H+ CMVDL GRAG L +A + +MP KP+
Sbjct: 493 CSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGA 552
Query: 361 IWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMR 420
W TLL AC H + + + A E++ E+ P + G YVL++N Y VR MR
Sbjct: 553 TWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMR 612
Query: 421 ENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQ 451
+ + K+PG + + D F GD S P+
Sbjct: 613 DLGVKKDPGCAWIDTDSGFSLFSVGDTSSPE 643
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 158/372 (42%), Gaps = 44/372 (11%)
Query: 42 AAAVLLRFPIPDPTPYNTVIRHLA---LHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXX 98
A +++ I P P+N +I A L +A + M G+ D FT+P +
Sbjct: 97 AQSIIENSDILHPLPWNVLIASYAKNELFEEVIAA--YKRMVSKGIRPDAFTYPSVLKAC 154
Query: 99 XXXXXXXXXXX---XXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWS 155
+ S+++V NALI+ Y ++ +A LFD M +RD SW+
Sbjct: 155 GETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWN 214
Query: 156 TLIVCFTNNGYPAEALSLFQQMQLGDPQV------------------------------- 184
+I C+ + G +EA LF +M +V
Sbjct: 215 AVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNF 274
Query: 185 PESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRS 244
P S D V M+ + A S +GA+ LG +H + + LI MYS+C + +
Sbjct: 275 PTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHA 334
Query: 245 VKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHG 304
+ VF + ++ TW S+I+G A +S EA R+M AG +P+ + L C+
Sbjct: 335 LIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARI 394
Query: 305 GLVEDG--WRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIW 362
++ G + + R + Y ML + +VD+ ++G ++ A K V D+ K + V +
Sbjct: 395 ANLQHGKEFHCYILRRKCFKDYTML--WNSLVDVYAKSGKIVAA-KQVSDLMSKRDEVTY 451
Query: 363 RTLLGACVNHND 374
+L+ N +
Sbjct: 452 TSLIDGYGNQGE 463
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 89/181 (49%), Gaps = 8/181 (4%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
F + N+L++ Y SG + A + D M +RD ++++LI + N G AL+LF+
Sbjct: 413 FKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFK 472
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIR-RAGLGLTVPLGTALINM 234
+M + D V +++V+SA S + G + ++ G+ + + ++++
Sbjct: 473 EMTRSGIK----PDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDL 528
Query: 235 YSRCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
Y R G + ++ + MP++ + TW +L+ +HG ++ A + E ++P+
Sbjct: 529 YGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLE--MKPENPG 586
Query: 294 Y 294
Y
Sbjct: 587 Y 587
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 189/365 (51%), Gaps = 11/365 (3%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N +I + + +N A LFD MP++++ SW+T+I + N EAL++F +M L D
Sbjct: 268 NTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKM-LRDGS 326
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
V + +S++SA S L L G +H I ++ + +AL+NMYS+ G +
Sbjct: 327 VKPNVG--TYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIA 384
Query: 244 SVKVFEE--MPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVAC 301
+ K+F+ + R++++W S+I A HG +EA+ + MR+ G +P Y L AC
Sbjct: 385 ARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFAC 444
Query: 302 SHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVI 361
SH GLVE G F+ + + + EHY C+VDL GRAG L + F+ + +
Sbjct: 445 SHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSF 504
Query: 362 WRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRE 421
+ +L AC HN++ +A++ ++V E G YVL+SN Y +R M+E
Sbjct: 505 YGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKE 564
Query: 422 NRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGGYAPNTSSVLHD 481
+ K+PG S V + + H FV GD SHPQ+E + L + + ++ +V D
Sbjct: 565 KGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMR------KNKNVTSD 618
Query: 482 IQEEE 486
+E E
Sbjct: 619 AEEAE 623
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 125/263 (47%), Gaps = 17/263 (6%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
N+ A+++ Y S L++A LF EMP+R++ SW+T+I + +G +AL LF +M
Sbjct: 107 KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
PE + V S++ A+ G ++ + + + R V TA+++ ++
Sbjct: 167 -------PER-NIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAK 214
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
G +D + ++F+ MP RN+++W ++ITG A + R EA + F+ M E D A++
Sbjct: 215 NGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTM 270
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
+ + +F+ M E V V+ L K + D +KP
Sbjct: 271 ITGFIRNREMNKACGLFDRM-PEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKP 329
Query: 358 NSVIWRTLLGACVNHNDLVLAEK 380
N + ++L AC + LV ++
Sbjct: 330 NVGTYVSILSACSDLAGLVEGQQ 352
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 43/261 (16%)
Query: 126 LINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVP 185
LI G + A LFD +P+RD+ +W+ +I + G EA LF ++
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV-------- 103
Query: 186 ESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGL-----------TVPLGTALINM 234
+S V+ + + V Y+R L + V +I+
Sbjct: 104 DSRKNVVTWTAM--------------VSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDG 149
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y++ G ID+++++F+EMP RN+V+W S++ L GR EA+ F M R D ++
Sbjct: 150 YAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSW 205
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
TA + + G V++ R+F+ M + + M+ + + EA + + MP
Sbjct: 206 TAMVDGLAKNGKVDEARRLFDCMPERNII-----SWNAMITGYAQNNRIDEADQLFQVMP 260
Query: 355 IKPNSVIWRTLLGACVNHNDL 375
+ + W T++ + + ++
Sbjct: 261 -ERDFASWNTMITGFIRNREM 280
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 9/165 (5%)
Query: 225 VPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE 284
VP LI + G I + K+F+ +P R+VVTWT +ITG G REA RE
Sbjct: 46 VPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREA-------RE 98
Query: 285 AGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLL 344
R D A G L + E + E ++ + M+D ++G +
Sbjct: 99 LFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVV-SWNTMIDGYAQSGRID 157
Query: 345 EAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELD 389
+A + ++MP + N V W +++ A V + A ER+ D
Sbjct: 158 KALELFDEMP-ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRD 201
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 197/392 (50%), Gaps = 17/392 (4%)
Query: 35 SADTASYAAAVLLRFPIPDPTPY--NTVIRHLA-LHSPTLATTLFSHMHRTGVTVDHFTF 91
S A A V R D +P+ N++I A L A L+ M GV D FTF
Sbjct: 139 SCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTF 198
Query: 92 PLIXXX---XXXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQ 148
P + GF +++V NAL+ Y G + A ++FD +P
Sbjct: 199 PRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPH 258
Query: 149 RDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALEL 208
+D SW++++ + ++G EAL +F+ M Q D V + SV++ V S +
Sbjct: 259 KDYVSWNSMLTGYLHHGLLHEALDIFRLM----VQNGIEPDKVAISSVLARVLSF---KH 311
Query: 209 GIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAV 268
G +H ++ R G+ + + ALI +YS+ G + ++ +F++M R+ V+W ++I+
Sbjct: 312 GRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA--- 368
Query: 269 HGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLE 328
H ++ L+ F M A +PDG + + L C++ G+VEDG R+F M EYG+ P +E
Sbjct: 369 HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKME 428
Query: 329 HYGCMVDLLGRAGMLLEAFKF-VEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNE 387
HY CMV+L GRAGM+ EA+ V++M ++ +W LL AC H + + E A +R+ E
Sbjct: 429 HYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFE 488
Query: 388 LDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSM 419
L+P ++ ++ LL Y VR M
Sbjct: 489 LEPDNEHNFELLIRIYSKAKRAEDVERVRQMM 520
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 138/269 (51%), Gaps = 18/269 (6%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLA--SWSTLIVCFTNNGYPAEALSLFQ 175
+N+ + + L+ Y S G +A +FD M +RD + +W++LI + G +A++L+
Sbjct: 125 NNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYF 184
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMY 235
QM D P D V+ A +G++++G +H + + G G V + AL+ MY
Sbjct: 185 QMA-EDGVKP---DRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMY 240
Query: 236 SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
++CG I ++ VF+ +PH++ V+W S++TG HG EAL FR M + G+ PD A +
Sbjct: 241 AKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAIS 300
Query: 296 AAL---VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVED 352
+ L ++ HG + GW + M E V ++ L + G L +A F+ D
Sbjct: 301 SVLARVLSFKHGRQLH-GWVIRRGMEWELSV------ANALIVLYSKRGQLGQAC-FIFD 352
Query: 353 MPIKPNSVIWRTLLGA-CVNHNDLVLAEK 380
++ ++V W ++ A N N L E+
Sbjct: 353 QMLERDTVSWNAIISAHSKNSNGLKYFEQ 381
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 188 TDGVMMLSVISAVSSLGALELGIWVH----AYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
T+ + S++ SL A++ G+ VH Y+ R LG++ + L+ +Y+ CG +
Sbjct: 90 TEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGIS----SKLVRLYASCGYAEV 145
Query: 244 SVKVFEEMPHRNV--VTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVAC 301
+ +VF+ M R+ W SLI+G A G+ +A+ + M E G++PD + L AC
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKAC 205
Query: 302 SHGGLVEDGWRVFESMRSE---YGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
G V+ G + + E Y VY + +V + + G +++A + V DM +
Sbjct: 206 GGIGSVQIGEAIHRDLVKEGFGYDVYVL----NALVVMYAKCGDIVKA-RNVFDMIPHKD 260
Query: 359 SVIWRTLLGACVNHNDL 375
V W ++L ++H L
Sbjct: 261 YVSWNSMLTGYLHHGLL 277
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 122/390 (31%), Positives = 197/390 (50%), Gaps = 14/390 (3%)
Query: 53 DPTPYNTVIR-HLALHSPTLATTLFSHMHRTGVTVDHFT---FPLIXXXXXXXXXXXXXX 108
D ++T++ +L + LA LF M ++ V V+ T F
Sbjct: 191 DAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAH 250
Query: 109 XXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPA 168
G ++ + ALI YG +G ++ A +FD ++D+ +W+ +I + G
Sbjct: 251 VLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLE 310
Query: 169 EALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLG 228
E + L +QM+ + P S+ V +LS S S A +G V + + L LG
Sbjct: 311 ECVWLLRQMKY-EKMKPNSSTFVGLLS--SCAYSEAAF-VGRTVADLLEEERIALDAILG 366
Query: 229 TALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE--AG 286
TAL++MY++ G ++++V++F M ++V +WT++I+G HG +REA+ F M E
Sbjct: 367 TALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCK 426
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
+RP+ + L ACSHGGLV +G R F+ M Y P +EHYGC+VDLLGRAG L EA
Sbjct: 427 VRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEA 486
Query: 347 FKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXX 406
++ + ++PI +S WR LL AC + + L E R+ E+ H D +LL+ +
Sbjct: 487 YELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTH--A 544
Query: 407 XXXXXXXXVRNSMRENRIVKEPGLSVVHID 436
+ N + + R KE G S + I+
Sbjct: 545 VAGNPEKSLDNELNKGR--KEAGYSAIEIE 572
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 176/419 (42%), Gaps = 59/419 (14%)
Query: 4 VYNLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRH 63
V +H ++KTG + ++ S YA+++ + +NT+IR
Sbjct: 44 VSRIHGYMVKTGLDKDDFAVSKLL----AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRG 99
Query: 64 LALH-SPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXX---XXXXXGFASN 119
++ P A ++F+ + G+T+D F+F GF
Sbjct: 100 YSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVF 159
Query: 120 IFVQNALINAYGSSGSLNLAVHLFDEMPQR-DLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
++NALI+ Y G ++ A +FDEMPQ D ++STL+ + A AL LF+ M+
Sbjct: 160 TDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMR 219
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
+ V ST +LS +SA+S LG L H + GL L + L TALI MY +
Sbjct: 220 KSEVVVNVST----LLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKT 275
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G I + ++F+ ++VVTW +I A G E + R M+ ++P+ + + L
Sbjct: 276 GGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLL 335
Query: 299 VACSHG-----------------------------------GLVEDGWRVFESMRSEYGV 323
+C++ GL+E +F M+ +
Sbjct: 336 SSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKD-- 393
Query: 324 YPMLEHYGCMVDLLGRAGMLLEAFKFV-----EDMPIKPNSVIWRTLLGACVNHNDLVL 377
++ + M+ G G+ EA E+ ++PN + + +L AC +H LV+
Sbjct: 394 ---VKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNAC-SHGGLVM 448
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 182/353 (51%), Gaps = 5/353 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G N+ V+ +L++ Y G + +A +F M + SW +LI F NG +A
Sbjct: 247 GLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAV 306
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+MQ + D V ++ V+ A S +G+L+ G VH YI + + L TAL++M
Sbjct: 307 VEMQ----SLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDM 361
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
YS+CG++ S ++FE + +++V W ++I+ +HG +E + F M E+ + PD A +
Sbjct: 362 YSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATF 421
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
+ L A SH GLVE G F M ++Y + P +HY C++DLL RAG + EA +
Sbjct: 422 ASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEK 481
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXX 414
+ IW LL C+NH +L + + A ++ +L+P G L+SN +
Sbjct: 482 LDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAK 541
Query: 415 VRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIK 467
VR MR + K PG S + ++ + F+ D SH + +++ L ++ I+
Sbjct: 542 VRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIR 594
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 148/312 (47%), Gaps = 12/312 (3%)
Query: 4 VYNLHATLIKTGQHNNPLSL-RTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIR 62
+ +HA +I TG N S+ R C + SYA V P + YN++I
Sbjct: 33 ITQIHAFVISTGNLLNGSSISRDLIASCGRIGEI---SYARKVFDELPQRGVSVYNSMIV 89
Query: 63 HLAL-HSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXX---XXXXXGFAS 118
+ +P L+ M + D TF + G+ +
Sbjct: 90 VYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKN 149
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
++FV ++++N Y G ++ A LF +M +RD+ W+T++ F G +A+ +++MQ
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQ 209
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
D V+ML ++ A LG ++G VH Y+ R GL + V + T+L++MY++
Sbjct: 210 ----NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKV 265
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G I+ + +VF M + V+W SLI+G A +G + +A A +M+ G +PD L
Sbjct: 266 GFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVL 325
Query: 299 VACSHGGLVEDG 310
VACS G ++ G
Sbjct: 326 VACSQVGSLKTG 337
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 215/471 (45%), Gaps = 58/471 (12%)
Query: 32 ELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLALHSPTLATTLFSHMHRTGVTVDHFTF 91
E+P D S A AV+ RF RH+ A+ F + G+ + FTF
Sbjct: 52 EIPELDVIS-ATAVIGRFVKES--------RHVE------ASQAFKRLLCLGIRPNEFTF 96
Query: 92 PLIXXXXXXXXXXXXXXXX---XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDE--- 145
+ G ASN+FV +A++N Y +L A FD+
Sbjct: 97 GTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRD 156
Query: 146 ----------------------------MPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
MP+R + +W+ +I F+ G EA++ F M
Sbjct: 157 PNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM 216
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHA-YIRRAGLGLTVPLGTALINMYS 236
+P + ++ IS ++S GA G +HA I+ G V + +LI+ YS
Sbjct: 217 LREGVVIPNESTFPCAITAISNIASHGA---GKSIHACAIKFLGKRFNVFVWNSLISFYS 273
Query: 237 RCGSIDRSVKVFE--EMPHRNVVTWTSLITGLAVHGRSREALRAFRDM-REAGLRPDGAA 293
+CG+++ S+ F E RN+V+W S+I G A +GR EA+ F M ++ LRP+
Sbjct: 274 KCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVT 333
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLE--HYGCMVDLLGRAGMLLEAFKFVE 351
L AC+H GL+++G+ F ++Y +LE HY CMVD+L R+G EA + ++
Sbjct: 334 ILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIK 393
Query: 352 DMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXX 411
MP+ P W+ LLG C H++ LA+ A ++ ELDP YV+LSNAY
Sbjct: 394 SMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQN 453
Query: 412 XXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSV 462
+R M+E + + G S + + + FV+ D ++ +E+ + L V
Sbjct: 454 VSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALV 504
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 111/245 (45%), Gaps = 17/245 (6%)
Query: 142 LFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVS 201
+FDE+P+ D+ S + +I F EA F+++ + E T G +VI + +
Sbjct: 49 VFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFG----TVIGSST 104
Query: 202 SLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTS 261
+ ++LG +H Y + GL V +G+A++N Y + ++ + + F++ NVV+ T+
Sbjct: 105 TSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN 164
Query: 262 LITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEY 321
LI+G EAL FR M E + + A + S G E+ F M E
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVNTFVDMLREG 220
Query: 322 GVYPMLEHYGCMVDLLGR-----AGMLLEAFKFVEDMPIKPNSVIWRTLL---GACVNHN 373
V P + C + + AG + A ++ + + N +W +L+ C N
Sbjct: 221 VVIPNESTFPCAITAISNIASHGAGKSIHACA-IKFLGKRFNVFVWNSLISFYSKCGNME 279
Query: 374 DLVLA 378
D +LA
Sbjct: 280 DSLLA 284
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 179/344 (52%), Gaps = 16/344 (4%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N++I+A G A+ +F P++++ +W+T+I + NG +AL F +M +
Sbjct: 275 NSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMM----K 330
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
+D +V+ A S L L G +H + G +G AL+N+Y++CG I
Sbjct: 331 SGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKE 390
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSH 303
+ + F ++ ++++V+W +++ VHG + +AL+ + +M +G++PD + L CSH
Sbjct: 391 ADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSH 450
Query: 304 GGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVI-- 361
GLVE+G +FESM +Y + ++H CM+D+ GR G L EA +D+ +S++
Sbjct: 451 SGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEA----KDLATTYSSLVTD 506
Query: 362 ------WRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXV 415
W TLLGAC H L + + + +P + +VLLSN Y V
Sbjct: 507 SSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDV 566
Query: 416 RNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFL 459
R M E + K PG S + + V FV GD+SHP+ EE+ + L
Sbjct: 567 RREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETL 610
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 129/290 (44%), Gaps = 41/290 (14%)
Query: 127 INAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPE 186
I + SG + A +FD MP+ D +W+T++ ++ G EA++LF Q++ D +
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK--- 67
Query: 187 STDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG------- 239
D +++S +SLG ++ G + + + R+G ++P+ +LI+MY +C
Sbjct: 68 -PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 240 --------------------------SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSR 273
+ ++ VF EMP R W +I+G A G+
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 274 EALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCM 333
L F++M E+ +PD +++ + ACS R+ ++ + G +E +
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSV 246
Query: 334 VDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKE 383
+ + G +A + +E + + V W +++ AC+ + EKA E
Sbjct: 247 LSFYTKLGSRDDAMRELESIEV-LTQVSWNSIIDACMKIGE---TEKALE 292
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 162/410 (39%), Gaps = 77/410 (18%)
Query: 29 RCAELPSADTASYAAAVLLRFPIPDPTPYNTVI---RHLALHSPTLATTLFSHMHRTGVT 85
+ A L + + A V P D +NT++ L LH +A LF+ + +
Sbjct: 10 KIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIA--LFTQLRFSDAK 67
Query: 86 VDHFTFPLIXXXXXXXXXXX---XXXXXXXXXGFASNIFVQNALINAYG----------- 131
D ++F I GF +++ V N+LI+ YG
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 132 ----------------------SSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAE 169
++ A+ +F EMP+R +W+ +I + G
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 170 ALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGT 229
LSLF++M L P+ +++ SA SS + G VHA + + G V
Sbjct: 188 CLSLFKEM-LESEFKPDCYTFSSLMNACSADSS--NVVYGRMVHAVMLKNGWSSAVEAKN 244
Query: 230 ALINMYSRCGSID-------------------------------RSVKVFEEMPHRNVVT 258
++++ Y++ GS D ++++VF P +N+VT
Sbjct: 245 SVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVT 304
Query: 259 WTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMR 318
WT++ITG +G +ALR F +M ++G+ D AY A L ACS L+ G ++
Sbjct: 305 WTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHG-KMIHGCL 363
Query: 319 SEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGA 368
G +V+L + G + EA + D+ K + V W T+L A
Sbjct: 364 IHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANK-DLVSWNTMLFA 412
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 229 TALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLR 288
T+ I ++ G I + +VF+ MP + V W +++T + G +EA+ F +R + +
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 289 PDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFK 348
PD ++TA L C+ G V+ G R +S+ G L ++D+ G+ L A K
Sbjct: 68 PDDYSFTAILSTCASLGNVKFG-RKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 349 FVEDMPIKP-NSVIWRTLLGACVN 371
DM N V W +LL A +N
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMN 150
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 107/270 (39%), Gaps = 18/270 (6%)
Query: 72 ATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXX---XXXXXXXXXXGFASNIFVQNALIN 128
A F M ++GV DHF + + GF +V NAL+N
Sbjct: 321 ALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVN 380
Query: 129 AYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPEST 188
Y G + A F ++ +DL SW+T++ F +G +AL L+ M + P
Sbjct: 381 LYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNM-IASGIKP--- 436
Query: 189 DGVMMLSVISAVSSLGALELGIWV-HAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKV 247
D V + +++ S G +E G + + ++ + L V T +I+M+ R G + + +
Sbjct: 437 DNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDL 496
Query: 248 FEE-----MPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACS 302
N +W +L+ + H + + ++ A + + + + CS
Sbjct: 497 ATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCS 556
Query: 303 HGGLVEDGWRVFESMRSEYGVYPMLEHYGC 332
G W+ E +R E M + GC
Sbjct: 557 TG-----RWKEGEDVRREMVERGMKKTPGC 581
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 206/414 (49%), Gaps = 38/414 (9%)
Query: 57 YNTVIR-HLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXX---XXX 112
YNT+IR +L + LF+HM + V ++ TFP +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 113 XXGFASNIFVQ-------------------------------NALINAYGSSGSLNLAVH 141
GF + FVQ N+L++A G +G ++ A
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 142 LFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVS 201
F MP D+ SW+T+I F+ G A+AL +F +M + V + +SV+S+ +
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATF-VSVLSSCA 232
Query: 202 SL--GALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTW 259
+ G + LG +H Y+ + LT LGTAL++MY + G ++ ++ +F+++ + V W
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 260 TSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRS 319
++I+ LA +GR ++AL F M+ + + P+G A L AC+ LV+ G ++F S+ S
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 320 EYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAE 379
EY + P EHYGC+VDL+GRAG+L++A F++ +P +P++ + LLGAC H + L
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGN 412
Query: 380 KAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVV 433
+++ L P H G YV LS +R +M E I K P SV+
Sbjct: 413 TVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 207/433 (47%), Gaps = 15/433 (3%)
Query: 6 NLHATLIKTGQHNNPLSLRTF---FLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIR 62
LH ++K+G ++P ++ + C L A + + + + +N+++
Sbjct: 259 QLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSV---AVWNSMLS 315
Query: 63 HLALHSPTLATT-LFSHMHRTGVTVDHFTFP---LIXXXXXXXXXXXXXXXXXXXXGFAS 118
++ A L ++++ + D +T I G+
Sbjct: 316 GFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYEL 375
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
+ V + L++ + + G++ A LF +P +D+ ++S LI +G+ + A LF+++
Sbjct: 376 DYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFREL- 434
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
++ D ++ +++ SSL +L G +H + G TAL++MY +C
Sbjct: 435 ---IKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKC 491
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G ID V +F+ M R+VV+WT +I G +GR EA R F M G+ P+ + L
Sbjct: 492 GEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLL 551
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
AC H GL+E+ E+M+SEYG+ P LEHY C+VDLLG+AG+ EA + + MP++P+
Sbjct: 552 SACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPD 611
Query: 359 SVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNS 418
IW +LL AC H + L E++ + P Y LSNAY VR +
Sbjct: 612 KTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREA 671
Query: 419 MRENRIVKEPGLS 431
++ KE G+S
Sbjct: 672 AKKLG-AKESGMS 683
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 137/294 (46%), Gaps = 39/294 (13%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G + N+F+ N +I+ Y L+ A +FDEM +R++ +W+T++ +T++G P +A+ L+
Sbjct: 35 GISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELY 94
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
++M D + E+ + M +V+ A +G ++LGI V+ I + L V L ++++M
Sbjct: 95 RRML--DSE-EEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDM 151
Query: 235 -------------------------------YSRCGSIDRSVKVFEEMPHRNVVTWTSLI 263
Y + G +D +V +F MP NVV+W LI
Sbjct: 152 YVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLI 211
Query: 264 TGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGV 323
+G G R AL M+ GL DG A L ACS GGL+ G + + G+
Sbjct: 212 SGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMG-KQLHCCVVKSGL 269
Query: 324 YPMLEHYGCMVDLLGRAGMLLEAFKFV--EDMPIKPNSVIWRTLL-GACVNHND 374
++D+ G L+ A E + + + +W ++L G +N +
Sbjct: 270 ESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEEN 323
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 159/395 (40%), Gaps = 56/395 (14%)
Query: 42 AAAVLLRFPIPDPTPYNTVIRHLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXX 101
A + R P P+ +N +I A M R G+ +D F P
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFG 251
Query: 102 XXXXXXXXX---XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMP---QRDLASWS 155
G S+ F +ALI+ Y + GSL A +F + +A W+
Sbjct: 252 GLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWN 311
Query: 156 TLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAY 215
+++ F N AL L Q+ D T + I+ V+ L LG+ VH+
Sbjct: 312 SMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVN----LRLGLQVHSL 367
Query: 216 IRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREA 275
+ +G L +G+ L+++++ G+I + K+F +P+++++ ++ LI G G + A
Sbjct: 368 VVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLA 427
Query: 276 LRAFRDMREAGLRPDGAAYTAALVACS-----------HG-------------------- 304
FR++ + GL D + L CS HG
Sbjct: 428 FYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDM 487
Query: 305 ----GLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM---PIKP 357
G +++G +F+ M ++ G +V G+ G + EAF++ M I+P
Sbjct: 488 YVKCGEIDNGVVLFDGMLER----DVVSWTGIIVG-FGQNGRVEEAFRYFHKMINIGIEP 542
Query: 358 NSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHH 392
N V + LL AC H+ L+ E+A+ + + +
Sbjct: 543 NKVTFLGLLSAC-RHSGLL--EEARSTLETMKSEY 574
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 99/188 (52%), Gaps = 14/188 (7%)
Query: 191 VMMLSVISA----VSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVK 246
VM L +I+A + A + G + A++ + G+ V + +I+MY + + K
Sbjct: 2 VMDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHK 61
Query: 247 VFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA----YTAALVACS 302
VF+EM RN+VTWT++++G G+ +A+ +R M ++ + AA Y+A L AC
Sbjct: 62 VFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDS---EEEAANEFMYSAVLKACG 118
Query: 303 HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIW 362
G ++ G V+E + E + + +VD+ + G L+EA +++ ++P+S W
Sbjct: 119 LVGDIQLGILVYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSW 176
Query: 363 RTLL-GAC 369
TL+ G C
Sbjct: 177 NTLISGYC 184
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 199/411 (48%), Gaps = 11/411 (2%)
Query: 52 PDPTPYNTVIRHLALHS-PTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXX- 109
D +N++I + H A LF M R V D +T+ +
Sbjct: 268 KDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSL 327
Query: 110 --XXXXXGFASNIFVQNALINAYGS--SGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNG 165
G NALI+ Y +G++ A+ LF+ + +DL SW+++I F G
Sbjct: 328 HGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKG 387
Query: 166 YPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTV 225
+A+ F ++ + +V D +++ + S L L+LG +HA ++G
Sbjct: 388 LSEDAVKFFSYLRSSEIKV----DDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNE 443
Query: 226 PLGTALINMYSRCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVHGRSREALRAFRDMRE 284
+ ++LI MYS+CG I+ + K F+++ + + V W ++I G A HG + +L F M
Sbjct: 444 FVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCN 503
Query: 285 AGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLL 344
++ D +TA L ACSH GL+++G + M Y + P +EHY VDLLGRAG++
Sbjct: 504 QNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVN 563
Query: 345 EAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYX 404
+A + +E MP+ P+ ++ +T LG C ++ +A + + E++P YV LS+ Y
Sbjct: 564 KAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYS 623
Query: 405 XXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEI 455
V+ M+E + K PG S + I V F + D S+P ++I
Sbjct: 624 DLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDI 674
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 167/378 (44%), Gaps = 22/378 (5%)
Query: 6 NLHATLIKTGQHNNPL---SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIR 62
+H +IK G N SL + +C + A A P+ +N +I
Sbjct: 122 QVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEA------FKEISEPNSVSWNALIA 175
Query: 63 -HLALHSPTLATTLFSHMH-RTGVTVDHFTF-PLIXXXX--XXXXXXXXXXXXXXXXGFA 117
+ + A L M + VT+D TF PL+ G
Sbjct: 176 GFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQ 235
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMP-QRDLASWSTLIVCFTNNGYPAEALSLFQQ 176
I + NA+I++Y GS++ A +FD + +DL SW+++I F+ + A LF Q
Sbjct: 236 HEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQ 295
Query: 177 MQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYS 236
MQ + TD ++SA S G +H + + GL ALI+MY
Sbjct: 296 MQ----RHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYI 351
Query: 237 R--CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
+ G+++ ++ +FE + +++++W S+ITG A G S +A++ F +R + ++ D A+
Sbjct: 352 QFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAF 411
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
+A L +CS ++ G ++ ++ ++ G ++ + + G++ A K + +
Sbjct: 412 SALLRSCSDLATLQLGQQI-HALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQIS 470
Query: 355 IKPNSVIWRTLLGACVNH 372
K ++V W ++ H
Sbjct: 471 SKHSTVAWNAMILGYAQH 488
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 86/152 (56%), Gaps = 4/152 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G S+I+V N ++++Y G L A LFDEMP+RD SW+T+I +T+ G +A LF
Sbjct: 30 GSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLF 89
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M+ V DG ++ ++S+ +LG VH + + G V +G++L++M
Sbjct: 90 TCMKRSGSDV----DGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDM 145
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGL 266
Y++C ++ + + F+E+ N V+W +LI G
Sbjct: 146 YAKCERVEDAFEAFKEISEPNSVSWNALIAGF 177
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 153/385 (39%), Gaps = 53/385 (13%)
Query: 41 YAAAVLLRFPIPDPTPYNTVIR-HLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXX 99
YA + P D +NT+I + + A LF+ M R+G VD ++F +
Sbjct: 53 YANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIA 112
Query: 100 XXXXXXXXXXX---XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWST 156
G+ N++V ++L++ Y + A F E+ + + SW+
Sbjct: 113 SVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNA 172
Query: 157 LIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYI 216
LI F A L M++ ++ +L+++ L+ VHA +
Sbjct: 173 LIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQ---VHAKV 229
Query: 217 RRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMP-HRNVVTWTSLITGLAVHGRSREA 275
+ GL + + A+I+ Y+ CGS+ + +VF+ + +++++W S+I G + H A
Sbjct: 230 LKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESA 289
Query: 276 LRAFRDMREAGLRPDGAAYTAALVACS-----------HG-------------------- 304
F M+ + D YT L ACS HG
Sbjct: 290 FELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISM 349
Query: 305 ------GLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKF---VEDMPI 355
G +ED +FES++S+ L + ++ + G+ +A KF + I
Sbjct: 350 YIQFPTGTMEDALSLFESLKSKD-----LISWNSIITGFAQKGLSEDAVKFFSYLRSSEI 404
Query: 356 KPNSVIWRTLLGACVNHNDLVLAEK 380
K + + LL +C + L L ++
Sbjct: 405 KVDDYAFSALLRSCSDLATLQLGQQ 429
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 24/178 (13%)
Query: 212 VHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGR 271
H Y + G + + +++ Y + G + + +F+EMP R+ V+W ++I+G G+
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 272 SREALRAFRDMREAGLRPDGAAYTAALVACS-----------HGGLVEDGWRVFESMRSE 320
+A F M+ +G DG +++ L + HG +++ G+ E
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGY--------E 133
Query: 321 YGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLA 378
VY +VD+ + + +AF+ +++ +PNSV W L+ V D+ A
Sbjct: 134 CNVYVG----SSLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAGFVQVRDIKTA 186
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 215/451 (47%), Gaps = 16/451 (3%)
Query: 7 LHATLIKTG---QHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRH 63
LH ++KTG + +L T +L+C + + ASY VL P D + +I
Sbjct: 267 LHCQIVKTGFDVDMHLKTALITMYLKCGK----EEASYR--VLETIPNKDVVCWTVMISG 320
Query: 64 LA-LHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX---XXXXGFASN 119
L L A +FS M ++G + + G+ +
Sbjct: 321 LMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLD 380
Query: 120 IFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
N+LI Y G L+ ++ +F+ M +RDL SW+ +I + N +AL LF++M+
Sbjct: 381 TPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKF 440
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
+ + D ++S++ A SS GAL +G +H + R+ + + TAL++MYS+CG
Sbjct: 441 ---KTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCG 497
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
++ + + F+ + ++VV+W LI G HG+ AL + + +G+ P+ + A L
Sbjct: 498 YLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLS 557
Query: 300 ACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNS 359
+CSH G+V+ G ++F SM ++GV P EH C+VDLL RA + +AFKF ++ +P+
Sbjct: 558 SCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSI 617
Query: 360 VIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSM 419
+ +L AC + + + E + EL P G YV L +++ N M
Sbjct: 618 DVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQM 677
Query: 420 RENRIVKEPGLSVVHIDQVVHEFVSGDNSHP 450
R + K PG S + ++ F SH
Sbjct: 678 RSLGLKKLPGWSKIEMNGKTTTFFMNHTSHS 708
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 109/199 (54%), Gaps = 4/199 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF +I V N+++N Y + A LFD+M QRD+ SW+T+I + + G +E L L
Sbjct: 174 GFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLL 233
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+M+ GD P+ LSV ++ LE+G +H I + G + + L TALI M
Sbjct: 234 YRMR-GDGLRPDQQTFGASLSV---SGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITM 289
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y +CG + S +V E +P+++VV WT +I+GL GR+ +AL F +M ++G A
Sbjct: 290 YLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAI 349
Query: 295 TAALVACSHGGLVEDGWRV 313
+ + +C+ G + G V
Sbjct: 350 ASVVASCAQLGSFDLGASV 368
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 151/330 (45%), Gaps = 18/330 (5%)
Query: 57 YNTVIRHLALHSP-TLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXX---XXXXXXX 112
+N+ I HL+ H + FS M + D FTFP +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 113 XXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALS 172
GF+S+ ++ ++L+N Y G L A +F+EM +RD+ W+ +I C++ G EA S
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 173 LFQQMQL-GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTAL 231
L +M+ G P V +L ++S V + L+ +H + G + + ++
Sbjct: 134 LVNEMRFQGIKPGP-----VTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSM 185
Query: 232 INMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDG 291
+N+Y +C + + +F++M R++V+W ++I+G A G E L+ MR GLRPD
Sbjct: 186 LNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQ 245
Query: 292 AAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVE 351
+ A+L +E G R+ + G + ++ + + G +++ +E
Sbjct: 246 QTFGASLSVSGTMCDLEMG-RMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLE 304
Query: 352 DMPIKPNSVIWRTLLGACVNHNDLVLAEKA 381
+P K + V W ++ + L AEKA
Sbjct: 305 TIPNK-DVVCWTVMISGLMR---LGRAEKA 330
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 192/370 (51%), Gaps = 27/370 (7%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ-LGDP 182
NA+I Y GSL+ A LFDEM ++D ++ +I + +G EA++LF +M+ +G
Sbjct: 273 NAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS 332
Query: 183 QVPESTDGVM--------------------------MLSVISAVSSLGALELGIWVHAYI 216
G+M + S++ +++ L+ G +HA+
Sbjct: 333 TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFA 392
Query: 217 RRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREAL 276
R G + + T++I+ Y++ G + + +VF+ R+++ WT++IT AVHG S A
Sbjct: 393 IRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSAC 452
Query: 277 RAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDL 336
F M+ G +PD TA L A +H G + +F+SM ++Y + P +EHY CMV +
Sbjct: 453 SLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSV 512
Query: 337 LGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDY 396
L RAG L +A +F+ MPI P + +W LL DL +A A +R+ E++P + G+Y
Sbjct: 513 LSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNY 572
Query: 397 VLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIM 456
+++N Y VRN M+ + K PG S + ++ + F++ D+S + +E+
Sbjct: 573 TIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMY 632
Query: 457 KFLVSVVDTI 466
+ + +V+++
Sbjct: 633 EIIEGLVESM 642
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 95/173 (54%), Gaps = 3/173 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF S++FV N +I Y ++ A +FDEM +RD+ SW+++I ++ +G + ++
Sbjct: 162 GFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMY 221
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+ M P +GV ++SV A L G+ VH + + + + L A+I
Sbjct: 222 KAMLACSDFKP---NGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGF 278
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGL 287
Y++CGS+D + +F+EM ++ VT+ ++I+G HG +EA+ F +M GL
Sbjct: 279 YAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL 331
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 117/258 (45%), Gaps = 8/258 (3%)
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF-----Q 175
F+ + LI+ Y A+H+FDE+ R+ S++ L++ +T+ +A SLF
Sbjct: 58 FLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGS 117
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMY 235
D P+S +L +S L VH ++ R G V +G +I Y
Sbjct: 118 SCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYY 177
Query: 236 SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE-AGLRPDGAAY 294
++C +I+ + KVF+EM R+VV+W S+I+G + G + + ++ M + +P+G
Sbjct: 178 TKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTV 237
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
+ AC + G V + M E + L ++ + G L A ++M
Sbjct: 238 ISVFQACGQSSDLIFGLEVHKKM-IENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMS 296
Query: 355 IKPNSVIWRTLLGACVNH 372
K +SV + ++ + H
Sbjct: 297 EK-DSVTYGAIISGYMAH 313
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G +NI+V ++I+ Y G L A +FD R L +W+ +I + +G A SLF
Sbjct: 396 GADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLF 455
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWV-HAYIRRAGLGLTVPLGTALIN 233
QMQ + D V + +V+SA + G ++ + + + + + V +++
Sbjct: 456 DQMQC----LGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVS 511
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVV-TWTSLITGLAVHG 270
+ SR G + +++ +MP + W +L+ G +V G
Sbjct: 512 VLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLG 549
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 169/309 (54%), Gaps = 3/309 (0%)
Query: 126 LINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVP 185
+I+ Y G + A LF M ++D + +I C+T NG P +AL LF QM + +
Sbjct: 269 MISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYI- 327
Query: 186 ESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSV 245
D + + SV+SA S LG G WV +YI G+ + L T+LI++Y + G ++
Sbjct: 328 -QPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAF 386
Query: 246 KVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGG 305
K+F + ++ V+++++I G ++G + EA F M E + P+ +T L A SH G
Sbjct: 387 KMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSG 446
Query: 306 LVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTL 365
LV++G++ F SM+ ++ + P +HYG MVD+LGRAG L EA++ ++ MP++PN+ +W L
Sbjct: 447 LVQEGYKCFNSMK-DHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGAL 505
Query: 366 LGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIV 425
L A HN++ E A +L+ G L+ Y VR+S++E ++
Sbjct: 506 LLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLC 565
Query: 426 KEPGLSVVH 434
K G S V
Sbjct: 566 KTLGCSWVE 574
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 116/288 (40%), Gaps = 22/288 (7%)
Query: 35 SADTASYAAAVLLRFPIPDPTPYNTVIRHLALHSPTLATT-LFSHMHRTGVTVDHFTFPL 93
S + +Y +L F D + ++R L+ H T ++ MH +G+
Sbjct: 50 SRNIVTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTS 109
Query: 94 IXXXXXXXXXXXXXX---XXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRD 150
+ G ++VQ L+ Y G + LA FD++ +++
Sbjct: 110 VLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKN 169
Query: 151 LASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGI 210
SW++L+ + +G EA +F ++PE D V +IS+ + G ++G
Sbjct: 170 TVSWNSLLHGYLESGELDEARRVFD-------KIPEK-DAVSWNLIISSYAKKG--DMG- 218
Query: 211 WVHAYIRRAGLGLTVPLG-TALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVH 269
+A + + L P LI Y C + + F+ MP +N V+W ++I+G
Sbjct: 219 --NACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKL 276
Query: 270 GRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESM 317
G + A FR M + D Y A + + G +D ++F M
Sbjct: 277 GDVQSAEELFRLMS----KKDKLVYDAMIACYTQNGKPKDALKLFAQM 320
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 20/234 (8%)
Query: 150 DLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELG 209
D SW L+ + + E + ++ M + +P S+ V SV+ A + + G
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMH--NSGIPPSSHAVT--SVLRACGKMENMVDG 123
Query: 210 IWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVH 269
+HA + GL V + T L+ +YSR G I+ + K F+++ +N V+W SL+ G
Sbjct: 124 KPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLES 183
Query: 270 GRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESM--RSEYGVYPML 327
G EA R F + E D ++ + + + G + + +F +M +S ++
Sbjct: 184 GELDEARRVFDKIPE----KDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILI 239
Query: 328 EHY-GCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEK 380
Y C L R + + MP K N V W T++ D+ AE+
Sbjct: 240 GGYVNCREMKLART--------YFDAMPQK-NGVSWITMISGYTKLGDVQSAEE 284
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/396 (31%), Positives = 189/396 (47%), Gaps = 48/396 (12%)
Query: 2 NRVYNLHATLIKTGQHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVI 61
+++ +H +IK N+ L +R + S YA+ V + P +N +I
Sbjct: 34 SQLKQIHTKIIKHNLTNDQLLVRQLI---SVSSSFGETQYASLVFNQLQSPSTFTWNLMI 90
Query: 62 RHLAL-HSPTLATTLFSHM---HRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX---XXXX 114
R L++ H P A LF M H++ D FTFP +
Sbjct: 91 RSLSVNHKPREALLLFILMMISHQS--QFDKFTFPFVIKACLASSSIRLGTQVHGLAIKA 148
Query: 115 GFASNIFVQNALINAYGSSG-------------------------------SLNLAVHLF 143
GF +++F QN L++ Y G L+ A +F
Sbjct: 149 GFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVF 208
Query: 144 DEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSL 203
++MP R++ SW+ +I + N P EA LF++MQ+ D + E T +++++ A + L
Sbjct: 209 NQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFT----IVNLLQASTQL 264
Query: 204 GALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLI 263
G+L +G WVH Y + G L LGTALI+MYS+CGS+ + KVF+ M +++ TW S+I
Sbjct: 265 GSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMI 324
Query: 264 TGLAVHGRSREALRAF-RDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYG 322
T L VHG EAL F EA + PD + L AC++ G V+DG R F M YG
Sbjct: 325 TSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYG 384
Query: 323 VYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
+ P+ EH CM+ LL +A + +A VE M P+
Sbjct: 385 ISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 181/346 (52%), Gaps = 5/346 (1%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF N++ +++I Y S G + A LFD + +++L W+ + + + N P L L
Sbjct: 322 GFG-NLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELA 380
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+ + P D ++M+SV+ A S +E G +H + R G+ + L TA ++M
Sbjct: 381 RAFIANETNTP---DSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDM 437
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
YS+CG+++ + ++F+ R+ V + ++I G A HG ++ + F DM E G +PD +
Sbjct: 438 YSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITF 497
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM- 353
A L AC H GLV +G + F+SM Y + P HY CM+DL G+A L +A + +E +
Sbjct: 498 MALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGID 557
Query: 354 PIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXX 413
++ ++VI L AC + + L ++ +E++ ++ + Y+ ++NAY
Sbjct: 558 QVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQ 617
Query: 414 XVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFL 459
+R+ MR + G S +ID+ H F S D SH + E I L
Sbjct: 618 RIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 126/284 (44%), Gaps = 41/284 (14%)
Query: 123 QNALINAYGSSGSLNLAVHLFDEMPQ-RDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
+NA+I AY G ++ A+ +F P+ D SW+TLI + NGY EAL + M+
Sbjct: 196 RNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENG 255
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSI 241
+ E + G +V++ +SSL +L++G VHA + + G + + ++++Y +CG++
Sbjct: 256 LKWDEHSFG----AVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNM 311
Query: 242 DRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGL-------------- 287
+ N+ + +S+I G + G+ EA R F + E L
Sbjct: 312 KYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLR 371
Query: 288 ------------------RPDGAAYTAALVACSHGGLVEDGWRVF-ESMRSEYGVYPMLE 328
PD + L ACS +E G + S+R+ G+ +
Sbjct: 372 QPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT--GILMDKK 429
Query: 329 HYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNH 372
VD+ + G +E + + D + ++V++ ++ C +H
Sbjct: 430 LVTAFVDMYSKCGN-VEYAERIFDSSFERDTVMYNAMIAGCAHH 472
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 171/315 (54%), Gaps = 6/315 (1%)
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
V NAL++ Y A ++F+ ++D+ +W+++I F+ NG EAL LF +M +
Sbjct: 379 VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN-SE 437
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGL--GLTVPLGTALINMYSRCG 239
P +GV + S+ SA +SLG+L +G +HAY + G +V +GTAL++ Y++CG
Sbjct: 438 SVTP---NGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCG 494
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
+ +F+ + +N +TW+++I G G + +L F +M + +P+ + +T+ L
Sbjct: 495 DPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILS 554
Query: 300 ACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNS 359
AC H G+V +G + F SM +Y P +HY CMVD+L RAG L +A +E MPI+P+
Sbjct: 555 ACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDV 614
Query: 360 VIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSM 419
+ L C H+ L E +++ +L P YVL+SN Y VRN M
Sbjct: 615 RCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLM 674
Query: 420 RENRIVKEPGLSVVH 434
++ + K G S +
Sbjct: 675 KQRGLSKIAGHSTME 689
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 106/202 (52%), Gaps = 11/202 (5%)
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
V L++ Y G + A +F+++ R++ W+++I + N E L LF +M+ +
Sbjct: 178 VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENN 237
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSI 241
E T G +++ A + L AL G W H + ++G+ L+ L T+L++MY +CG I
Sbjct: 238 VLGNEYTYGTLIM----ACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDI 293
Query: 242 DRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVAC 301
+ +VF E H ++V WT++I G +G EAL F+ M+ ++P+ + L C
Sbjct: 294 SNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC 353
Query: 302 SHGGLVEDGWRVFESMRSEYGV 323
GL+E+ E RS +G+
Sbjct: 354 ---GLIEN----LELGRSVHGL 368
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 124/293 (42%), Gaps = 48/293 (16%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G +I + L++ YG G A +FD++P+ D W ++ C+ N E + L+
Sbjct: 71 GLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLY 130
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+ + D ++ + A + L L+ G +H + + V L T L++M
Sbjct: 131 DLLMKHGFRY----DDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDM 185
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y++CG I + KVF ++ RNVV WTS+I G + E L F MRE + + Y
Sbjct: 186 YAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTY 245
Query: 295 TAALVACS-----------HGGLVEDGWRVFESMRSEYGVYPMLEHY-GC---------- 332
++AC+ HG LV+ G + + V +L+ Y C
Sbjct: 246 GTLIMACTKLSALHQGKWFHGCLVKSGIELSSCL-----VTSLLDMYVKCGDISNARRVF 300
Query: 333 ----MVDLLGRAGML------------LEAFKFVEDMPIKPNSVIWRTLLGAC 369
VDL+ M+ L F+ ++ + IKPN V ++L C
Sbjct: 301 NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC 353
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
Query: 117 ASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQ 176
+S++ V AL++ Y G A +FD + +++ +WS +I + G +L LF++
Sbjct: 477 SSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEE 536
Query: 177 MQLGDPQVPESTDGVMMLSVISAVSSLGALELG-IWVHAYIRRAGLGLTVPLGTALINMY 235
M + EST S++SA G + G + + + + T +++M
Sbjct: 537 MLKKQQKPNEST----FTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDML 592
Query: 236 SRCGSIDRSVKVFEEMP-HRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
+R G +++++ + E+MP +V + + + G +H R + M + L PD A+Y
Sbjct: 593 ARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLD--LHPDDASY 650
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 171/315 (54%), Gaps = 5/315 (1%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
S+ +V AL+N Y + A +F+ + + DL + S+LI ++ G EAL LF ++
Sbjct: 240 SHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAEL 299
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
++ + D V++ V+ + + L G VH+Y+ R GL L + + +ALI+MYS+
Sbjct: 300 RMSGKK----PDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSK 355
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
CG + ++ +F +P +N+V++ SLI GL +HG + A F ++ E GL PD ++A
Sbjct: 356 CGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSAL 415
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
L C H GL+ G +FE M+SE+G+ P EHY MV L+G AG L EAF+FV +
Sbjct: 416 LCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPI 475
Query: 358 NSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDY-VLLSNAYXXXXXXXXXXXVR 416
+S I LL C H + LAE E +++ Y V+LSN Y +R
Sbjct: 476 DSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLR 535
Query: 417 NSMRENRIVKEPGLS 431
+ + E+ K PG+S
Sbjct: 536 DGISESYGGKLPGIS 550
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 150/344 (43%), Gaps = 13/344 (3%)
Query: 49 FPIPDPTPYNTVIRHLA-LHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXX 107
FP +N++IR A H T +LFS + R+ D+FT+ +
Sbjct: 66 FPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGL 125
Query: 108 XXX---XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNN 164
G + +A++ AY +G + A LF +P DLA W+ +I+ +
Sbjct: 126 RCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCC 185
Query: 165 GYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLT 224
G+ + ++LF MQ Q + M+++ S + L + VHA+ + L
Sbjct: 186 GFWDKGINLFNLMQHRGHQ----PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSH 241
Query: 225 VPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE 284
+G AL+NMYSRC I + VF + ++V +SLITG + G +EAL F ++R
Sbjct: 242 SYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRM 301
Query: 285 AGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLL 344
+G +PD L +C+ G V S G+ ++ ++D+ + G+L
Sbjct: 302 SGKKPDCVLVAIVLGSCAELSDSVSGKEV-HSYVIRLGLELDIKVCSALIDMYSKCGLLK 360
Query: 345 EAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNEL 388
A +P K N V + +L+ H A A E+ E+
Sbjct: 361 CAMSLFAGIPEK-NIVSFNSLILGLGLHG---FASTAFEKFTEI 400
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 8/189 (4%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
A + + L Y + L A LFD P+R + W+++I + LSLF
Sbjct: 36 LARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFS 95
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMY 235
Q+ D + T + + + G +H +GLG G+A++ Y
Sbjct: 96 QILRSDTRPDNFTYACLARGFSESFDTKGLR----CIHGIAIVSGLGFDQICGSAIVKAY 151
Query: 236 SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
S+ G I + K+F +P ++ W +I G G + + F M+ G +P+ YT
Sbjct: 152 SKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPN--CYT 209
Query: 296 AALVACSHG 304
+VA + G
Sbjct: 210 --MVALTSG 216
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 202/453 (44%), Gaps = 45/453 (9%)
Query: 117 ASNIFVQNALINAYGSSGS----LNLAVHLFDEMP-QRDLASWSTLIVCFTNNGYPAEAL 171
A + QN+++ Y ++ S N+ + FD + Q + ++ N GY + +
Sbjct: 61 AGHTLTQNSMVGQYKTTVSPSVAQNVTIETFDSLCIQGNWREAVEVLDYLENKGYAMDLI 120
Query: 172 SLFQQMQL-GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
L +L G P+ ALE VH I V A
Sbjct: 121 RLLGLAKLCGKPE---------------------ALEAARVVHECIIALVSPCDVGARNA 159
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
+I MYS C S+D ++KVFEEMP N T ++ +G EA+ F +E G +P+
Sbjct: 160 IIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPN 219
Query: 291 GAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFV 350
G + C+ G V++G F++M EYG+ P +EHY + +L +G L EA FV
Sbjct: 220 GEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFV 279
Query: 351 EDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXX 410
E MP++P+ +W TL+ H D+ L ++ E V +LD
Sbjct: 280 ERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD--------------ATRLDKV 325
Query: 411 XXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGG 470
+ + + + KEP S F D+SHPQ I + L+S+ +K G
Sbjct: 326 SSAGLVATKASDFVKKEP--STRSEPYFYSTFRPVDSSHPQMNIIYETLMSLRSQLKEMG 383
Query: 471 YAPNTSSVLHDIQE-EEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHSFM 529
Y P+T I E KE GY E++AV LL + R AI ++ N+RI DCH M
Sbjct: 384 YVPDTRYYRSLIMAMENKEQIFGYR-EEIAVVESLLKSKPRSAITLLTNIRIVGDCHDMM 442
Query: 530 KHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
K +S I +D+I RD +H F G C C + W
Sbjct: 443 KLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 176/324 (54%), Gaps = 16/324 (4%)
Query: 125 ALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQV 184
A + Y G+++L+ LF+ RD+ WS++I + G +E ++L QM+ +
Sbjct: 292 AFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIE- 350
Query: 185 PESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRS 244
+ V +L+++SA ++ L VH+ I + G + LG ALI+MY++CGS+ +
Sbjct: 351 ---ANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAA 407
Query: 245 VKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHG 304
+VF E+ +++V+W+S+I +HG EAL F+ M + G D A+ A L AC+H
Sbjct: 408 REVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHA 467
Query: 305 GLVEDGWRVFESMRSEYGVYPM---LEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVI 361
GLVE+ +F ++ G Y M LEHY C ++LLGR G + +AF+ +MP+KP++ I
Sbjct: 468 GLVEEAQTIF----TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARI 523
Query: 362 WRTLLGACVNHNDLVLAEKAKERVNEL---DPHHDGDYVLLSNAYXXXXXXXXXXXVRNS 418
W +LL AC H L +A K NEL +P + +YVLLS + VR
Sbjct: 524 WSSLLSACETHGRLDVA--GKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRV 581
Query: 419 MRENRIVKEPGLSVVHIDQVVHEF 442
M+ ++ K G S + + + ++
Sbjct: 582 MQRRKLNKCYGFSKIEPELQIEDY 605
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 87/158 (55%), Gaps = 5/158 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF S+I + NALI+ Y GSL+ A +F E+ ++DL SWS++I + +G+ +EAL +F
Sbjct: 383 GFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIF 442
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+ M G +V D + L+++SA + G +E + + + +T+ IN+
Sbjct: 443 KGMIKGGHEV----DDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINL 498
Query: 235 YSRCGSIDRSVKVFEEMPHR-NVVTWTSLITGLAVHGR 271
R G ID + +V MP + + W+SL++ HGR
Sbjct: 499 LGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGR 536
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 115/252 (45%), Gaps = 9/252 (3%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIV-CFTNNGYPAEALSLFQQM 177
++ + AL++ Y A H+FD+M ++ SW+ +I C N Y + LF+ M
Sbjct: 184 SVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEM-GVDLFRAM 242
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLG-ALELGIWVHAYIRRAGLGLTVPLGTALINMYS 236
Q + + + V +LSV+ A L L +H + R G L A + MY
Sbjct: 243 QRENLR----PNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYC 298
Query: 237 RCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTA 296
RCG++ S +FE R+VV W+S+I+G A G E + MR+ G+ + A
Sbjct: 299 RCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLA 358
Query: 297 ALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIK 356
+ AC++ L+ V S + G + ++D+ + G L A + ++ K
Sbjct: 359 IVSACTNSTLLSFASTV-HSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK 417
Query: 357 PNSVIWRTLLGA 368
+ V W +++ A
Sbjct: 418 -DLVSWSSMINA 428
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G + V N+LI+ Y +FDEM RD S+ ++I +G EA+ L
Sbjct: 77 GADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLI 136
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIR-RAGLGLTVPLGTALIN 233
++M +P+S +L++ + + S + ++ HA + + +V L TAL++
Sbjct: 137 KEMYFYGF-IPKSELVASLLALCTRMGS--SSKVARMFHALVLVDERMQESVLLSTALVD 193
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
MY + + VF++M +N V+WT++I+G + + FR M+ LRP+
Sbjct: 194 MYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVT 253
Query: 294 YTAALVAC 301
+ L AC
Sbjct: 254 LLSVLPAC 261
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 11/172 (6%)
Query: 208 LGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLA 267
LG +H +AG + +LI+MY++ KVF+EM HR+ V++ S+I
Sbjct: 65 LGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCC 124
Query: 268 VHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESM-----RSEYG 322
G EA++ ++M G P + L C+ G R+F ++ R +
Sbjct: 125 QDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQES 184
Query: 323 VYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACV-NHN 373
V +VD+ + AF + M +K N V W ++ CV N N
Sbjct: 185 VLLSTA----LVDMYLKFDDHAAAFHVFDQMEVK-NEVSWTAMISGCVANQN 231
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 185/354 (52%), Gaps = 9/354 (2%)
Query: 48 RFPIPDPTPYNTVIR-HLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXX 106
R PI D +N + + + + A ++ +M GV D T +
Sbjct: 461 RLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYAR 520
Query: 107 XXXXXXXX---GFASNIFVQNALINAYGSSGSLNLAVHLFDEMP-QRDLASWSTLIVCFT 162
GF S V +ALIN + +L A+ LFD+ ++ SW+ ++ +
Sbjct: 521 GSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYL 580
Query: 163 NNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLG 222
+G EA++ F+QM++ Q + V ++++ A + L AL +G+ VH+ + + G
Sbjct: 581 LHGQAEEAVATFRQMKVEKFQ----PNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFC 636
Query: 223 LTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM 282
P+G +L++MY++CG I+ S K F E+ ++ +V+W ++++ A HG + A+ F M
Sbjct: 637 SQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSM 696
Query: 283 REAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGM 342
+E L+PD ++ + L AC H GLVE+G R+FE M + + +EHY CMVDLLG+AG+
Sbjct: 697 QENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGL 756
Query: 343 LLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDY 396
EA + + M +K + +W LL + H +L L+ A ++ +L+P + Y
Sbjct: 757 FGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY 810
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 149/320 (46%), Gaps = 13/320 (4%)
Query: 42 AAAVLLRFPIPDPTPYNTVIRHLALHSPTLATTLFSH-MHRTGVTVDHFT-FPLIXXXXX 99
A V + + D +NT++ LA + + A L H M V +DH + + LI
Sbjct: 154 ARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSK 213
Query: 100 XXXXXXXXXX--XXXXXGFASNIFV-QNALINAYGSSGSLNLAVHLFDEMPQRDLASWST 156
GF IF + LI+ Y + L A +F+E+ ++D +SW T
Sbjct: 214 LEKSDVCRCLHGLVIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGT 270
Query: 157 LIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYI 216
++ + +NG+ E L LF M+ D ++ + V S + A + +G L GI +H Y
Sbjct: 271 MMAAYAHNGFFEEVLELFDLMRNYDVRM----NKVAAASALQAAAYVGDLVKGIAIHDYA 326
Query: 217 RRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREAL 276
+ GL V + T+L++MYS+CG ++ + ++F + R+VV+W+++I G+ EA+
Sbjct: 327 VQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAI 386
Query: 277 RAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDL 336
FRDM ++P+ T+ L C+ G + + + LE ++ +
Sbjct: 387 SLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLG-KSIHCYAIKADIESELETATAVISM 445
Query: 337 LGRAGMLLEAFKFVEDMPIK 356
+ G A K E +PIK
Sbjct: 446 YAKCGRFSPALKAFERLPIK 465
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 128/279 (45%), Gaps = 7/279 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G ++ V +L++ Y G L +A LF + RD+ SWS +I + G EA+SLF
Sbjct: 330 GLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLF 389
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+ M ++ + V + SV+ + + A LG +H Y +A + + TA+I+M
Sbjct: 390 RDMM----RIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISM 445
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y++CG ++K FE +P ++ V + +L G G + +A +++M+ G+ PD
Sbjct: 446 YAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTM 505
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
L C+ G V+ + ++G ++++ + L A +
Sbjct: 506 VGMLQTCAFCSDYARGSCVYGQI-IKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCG 564
Query: 355 IKPNSVIWRTLLGACVNHN--DLVLAEKAKERVNELDPH 391
+ ++V W ++ + H + +A + +V + P+
Sbjct: 565 FEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPN 603
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 159/406 (39%), Gaps = 59/406 (14%)
Query: 6 NLHATLIKTG--QHNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIR- 62
+H +LI +G HN ++ + F R + + P +N++IR
Sbjct: 23 QVHGSLIVSGLKPHNQLINAYSLFQR---------QDLSRVIFDSVRDPGVVLWNSMIRG 73
Query: 63 --HLALHSPTLATTLFSHM-HRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX---XXXXGF 116
LH L F +M G+ D ++F G
Sbjct: 74 YTRAGLHREALG--FFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGL 131
Query: 117 ASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQ 176
S++++ AL+ Y + L A +FD+M +D+ +W+T++ NG + AL LF
Sbjct: 132 ESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHD 191
Query: 177 MQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYS 236
M+ D V + ++I AVS L ++ +H + + G + LI+MY
Sbjct: 192 MR----SCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKK--GFIFAFSSGLIDMYC 245
Query: 237 RCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTA 296
C + + VFEE+ ++ +W +++ A +G E L F MR +R + A +
Sbjct: 246 NCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAAS 305
Query: 297 ALVACSHGGLVEDGWRVFE------------------SMRSEYGVYPMLEH--------- 329
AL A ++ G + G + + SM S+ G + E
Sbjct: 306 ALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRD 365
Query: 330 ---YGCMVDLLGRAGMLLEAFKFVEDMP---IKPNSVIWRTLLGAC 369
+ M+ +AG EA DM IKPN+V ++L C
Sbjct: 366 VVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGC 411
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 192/362 (53%), Gaps = 12/362 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G+ SN ++LI+AY S ++ A + D M +D+ S ST+I + G EA+S+F
Sbjct: 358 GYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIF 417
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLT-VPLGTALIN 233
M+ ++ + + ++S+++A S L W H R L + + +GT++++
Sbjct: 418 CHMR-------DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVD 470
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
Y++CG+I+ + + F+++ +N+++WT +I+ A++G +AL F +M++ G P+
Sbjct: 471 AYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVT 530
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
Y AAL AC+HGGLV+ G +F+SM E P L+HY C+VD+L RAG + A + ++++
Sbjct: 531 YLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNL 589
Query: 354 P--IKPNSVIWRTLLGACVNH-NDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXX 410
P +K + W +L C N L++ + V EL+P Y+L S+ +
Sbjct: 590 PEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWE 649
Query: 411 XXXXVRNSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFLVSVVDTIKLGG 470
+R ++E ++ G S+V + F++GD E+ + S+ +KL
Sbjct: 650 DVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSLHRCMKLDD 709
Query: 471 YA 472
A
Sbjct: 710 TA 711
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 132/292 (45%), Gaps = 35/292 (11%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF VQN+++ Y S SL+ A LFDEM +RD+ SWS +I + + P L LF
Sbjct: 155 GFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLF 213
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLT-VPLGTALIN 233
++M P D V + SV+ A + + +++G VH + R G L V + +LI+
Sbjct: 214 KEMVHEAKTEP---DCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLID 270
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
MYS+ +D + +VF+E RN+V+W S++ G + R EAL F M + + D
Sbjct: 271 MYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVT 330
Query: 294 YTAALVACS-----------HGGLVEDGWRVFE----SMRSEYGVYPMLEHYGCMVDL-- 336
+ L C HG ++ G+ E S+ Y +++ G ++D
Sbjct: 331 VVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMT 390
Query: 337 -------------LGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDL 375
L AG EA M PN++ +LL AC DL
Sbjct: 391 YKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADL 442
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 137/307 (44%), Gaps = 41/307 (13%)
Query: 76 FSHMHRTGVTV-DHFTFPLIXXXXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSG 134
+S + R GV D F FP++ S +F N++ + Y G
Sbjct: 32 YSEIQRAGVQFNDPFVFPIVFKACAKL----------------SWLFQGNSIADFYMKCG 75
Query: 135 SLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMML 194
L + FD M RD SW+ ++ + G+ E L F ++++ + ST ++
Sbjct: 76 DLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTST----LV 131
Query: 195 SVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR 254
VI A SL G +H Y+ R+G + +++ MY+ S+ + K+F+EM R
Sbjct: 132 LVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSER 188
Query: 255 NVVTWTSLITGLAVHGRSREALRAFRDM-REAGLRPDGAAYTAALVACSHGGLVEDGWRV 313
+V++W+ +I L+ F++M EA PD T+ L AC+ ++ED
Sbjct: 189 DVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT---VMED---- 241
Query: 314 FESMRSEYGV-----YPMLEHYGC--MVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL 366
+ RS +G + + + + C ++D+ + + AF+ ++ + N V W ++L
Sbjct: 242 IDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR-NIVSWNSIL 300
Query: 367 GACVNHN 373
V HN
Sbjct: 301 AGFV-HN 306
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 180/333 (54%), Gaps = 10/333 (3%)
Query: 125 ALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQV 184
++I+ Y +G ++ A LF ++ +D +W+ +I N AEA SL M +
Sbjct: 405 SMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKP 464
Query: 185 PESTDGVMMLSVISAVSSLGALELGIWVHAYIRR--AGLGLTVPLGTALINMYSRCGSID 242
ST V++ S+ + L+ G +H I + A + L +L++MY++CG+I+
Sbjct: 465 LNSTYSVLL----SSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIE 520
Query: 243 RSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACS 302
+ ++F +M ++ V+W S+I GL+ HG + +AL F++M ++G +P+ + L ACS
Sbjct: 521 DAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACS 580
Query: 303 HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIW 362
H GL+ G +F++M+ Y + P ++HY M+DLLGRAG L EA +F+ +P P+ ++
Sbjct: 581 HSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVY 640
Query: 363 RTLLGAC-VNHNDL---VLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNS 418
LLG C +N D +AE+A R+ ELDP + +V L N Y +R
Sbjct: 641 GALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKE 700
Query: 419 MRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQ 451
M + K PG S V ++ + F+SGD S +
Sbjct: 701 MGIKGVKKTPGCSWVVVNGRANVFLSGDKSASE 733
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 27/279 (9%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N+ ++ A G AV LFDEMP+R++ SW+TL+ NG +A +F M
Sbjct: 137 NVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMP 196
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
S D V ++I +E + + V T+++ Y R
Sbjct: 197 --------SRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK----NVVTWTSMVYGYCRY 244
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE--AGLRPDGAAYTA 296
G + + ++F EMP RN+V+WT++I+G A + REAL F +M++ + P+G +
Sbjct: 245 GDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLIS 304
Query: 297 ALVACSHGGLVEDGWRVFESMRSEY--GVYPMLEHYG----CMVDLLGRAGMLLEAFKFV 350
AC GGL + R+ E + ++ + ++H G +V + +G++ A +
Sbjct: 305 LAYAC--GGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLL 362
Query: 351 -EDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNEL 388
E ++ ++I L + DL AE ERV L
Sbjct: 363 NESFDLQSCNIIINRYL----KNGDLERAETLFERVKSL 397
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 112/238 (47%), Gaps = 12/238 (5%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
+ ++ +QN+L++ Y G++ A +F +M Q+D SW+++I+ +++G +AL+LF+
Sbjct: 499 YDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFK 558
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRA-GLGLTVPLGTALINM 234
+M L + P S V L V+SA S G + G+ + ++ + + ++I++
Sbjct: 559 EM-LDSGKKPNS---VTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDL 614
Query: 235 YSRCGSIDRSVKVFEEMPHR-NVVTWTSL--ITGLAVHGRSREALRAFRDMREAGLRPDG 291
R G + + + +P + + +L + GL + E + MR L P
Sbjct: 615 LGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVN 674
Query: 292 AAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGC-MVDLLGRAGMLLEAFK 348
A AL G D + + MR E G+ + + GC V + GRA + L K
Sbjct: 675 APGHVALCNVYAGLGRHD---MEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDK 729
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 229 TALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLR 288
T++I+ Y G + R+ +F+++ ++ VTWT +I+GL + EA DM GL+
Sbjct: 404 TSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLK 463
Query: 289 PDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVY-PMLEHYGCMVDLLGRAGMLLEAF 347
P + Y+ L + ++ G + + Y P L +V + + G + +A+
Sbjct: 464 PLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAY 523
Query: 348 KFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNEL 388
+ M ++ ++V W +++ +H LA+KA E+
Sbjct: 524 EIFAKM-VQKDTVSWNSMIMGLSHHG---LADKALNLFKEM 560
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 14/154 (9%)
Query: 229 TALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLR 288
T+L++ Y++ G +D + +FE MP RN+VT +++TG R EA FR+M +
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK---- 136
Query: 289 PDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFK 348
+ ++T L A G ED +F+ M V + +V L R G + +A +
Sbjct: 137 -NVVSWTVMLTALCDDGRSEDAVELFDEMPERNVV-----SWNTLVTGLIRNGDMEKAKQ 190
Query: 349 FVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAK 382
+ MP + + V W ++ + ++ + E+AK
Sbjct: 191 VFDAMPSR-DVVSWNAMIKGYIENDGM---EEAK 220
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 193/413 (46%), Gaps = 69/413 (16%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
F S+I + + +++ Y GS+ A +FD ++DL W+TL+ + +G EAL LF
Sbjct: 406 FESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFY 465
Query: 176 QMQL-GDP-----------------QVPESTDGVMML----------------------- 194
MQL G P QV E+ D + +
Sbjct: 466 GMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNG 525
Query: 195 ----------------------SVISAVSS---LGALELGIWVHAY-IRRAGLGLTVPLG 228
S+ A+S+ L +L +G +H Y IR V +
Sbjct: 526 CSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIE 585
Query: 229 TALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLR 288
T+L++MY++CG I+++ KVF + + ++I+ A++G +EA+ +R + GL+
Sbjct: 586 TSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLK 645
Query: 289 PDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFK 348
PD T L AC+H G + +F + S+ + P LEHYG MVDLL AG +A +
Sbjct: 646 PDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALR 705
Query: 349 FVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXX 408
+E+MP KP++ + ++L+ +C L + ++ E +P + G+YV +SNAY
Sbjct: 706 LIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGS 765
Query: 409 XXXXXXVRNSMRENRIVKEPGLSVVHI--DQVVHEFVSGDNSHPQWEEIMKFL 459
+R M+ + K+PG S + I ++ VH FV+ D +H + EI L
Sbjct: 766 WDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMML 818
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 129/262 (49%), Gaps = 16/262 (6%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
+A N +++ L+ Y +L +A LF ++ R++ SW+ +I G AL F
Sbjct: 103 YARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFV 162
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMY 235
+M L + P D ++ +V A +L G VH Y+ ++GL V + ++L +MY
Sbjct: 163 EM-LENEIFP---DNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMY 218
Query: 236 SRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
+CG +D + KVF+E+P RN V W +L+ G +G++ EA+R F DMR+ G+ P +
Sbjct: 219 GKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVS 278
Query: 296 AALVACSHGGLVEDGWR-----VFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFV 350
L A ++ G VE+G + + M + + L ++ C V L+ A M+
Sbjct: 279 TCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVF------ 332
Query: 351 EDMPIKPNSVIWRTLLGACVNH 372
D + + V W ++ V
Sbjct: 333 -DRMFEKDVVTWNLIISGYVQQ 353
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 131/255 (51%), Gaps = 8/255 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G +FV ++L + YG G L+ A +FDE+P R+ +W+ L+V + NG EA+ LF
Sbjct: 203 GLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLF 262
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M+ Q E T V + + +SA +++G +E G HA G+ L LGT+L+N
Sbjct: 263 SDMR---KQGVEPTR-VTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNF 318
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y + G I+ + VF+ M ++VVTW +I+G G +A+ + MR L+ D
Sbjct: 319 YCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTL 378
Query: 295 TAALVACSHGGLVEDGWRV-FESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+ A + ++ G V +R + +L ++D+ + G +++A K V D
Sbjct: 379 ATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLA--STVMDMYAKCGSIVDA-KKVFDS 435
Query: 354 PIKPNSVIWRTLLGA 368
++ + ++W TLL A
Sbjct: 436 TVEKDLILWNTLLAA 450
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 163/373 (43%), Gaps = 21/373 (5%)
Query: 7 LHATLIKTGQHNNPL---SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTV-IR 62
+H ++K+G + SL + +C L A + V P + +N + +
Sbjct: 195 VHGYVVKSGLEDCVFVASSLADMYGKCGVLDDA------SKVFDEIPDRNAVAWNALMVG 248
Query: 63 HLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXX---XXXXXXXXXXXXXGFASN 119
++ A LFS M + GV T G +
Sbjct: 249 YVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELD 308
Query: 120 IFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
+ +L+N Y G + A +FD M ++D+ +W+ +I + G +A+ + Q M+L
Sbjct: 309 NILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRL 368
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
+ D V + +++SA + L+LG V Y R + L + +++MY++CG
Sbjct: 369 EKLKY----DCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCG 424
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
SI + KVF+ ++++ W +L+ A G S EALR F M+ G+ P+ + ++
Sbjct: 425 SIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIIL 484
Query: 300 ACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP---IK 356
+ G V++ +F M+S G+ P L + M++ + + G EA F+ M ++
Sbjct: 485 SLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLR 543
Query: 357 PNSVIWRTLLGAC 369
PN+ L AC
Sbjct: 544 PNAFSITVALSAC 556
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 174/320 (54%), Gaps = 11/320 (3%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEALSLF 174
N+ N++I+ +G AV LF+++ D A+W++LI F+ G EA F
Sbjct: 297 NLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFF 356
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
++M L VP + S++SA S + L+ G +H ++ +A + + T+LI+M
Sbjct: 357 ERM-LSVVMVPSLK---CLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDM 412
Query: 235 YSRCGSIDRSVKVFE--EMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGA 292
Y +CG + ++F+ E ++ V W +I+G HG A+ F +RE + P A
Sbjct: 413 YMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLA 472
Query: 293 AYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVED 352
+TA L ACSH G VE G ++F M+ EYG P EH GCM+DLLGR+G L EA + ++
Sbjct: 473 TFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQ 532
Query: 353 MPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXX 412
M +SV +LLG+C H D VL E+A ++ EL+P + +V+LS+ Y
Sbjct: 533 MSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDV 591
Query: 413 XXVRNSMRENRIVKEPGLSV 432
+R + + ++VK PGLS+
Sbjct: 592 ESIRQVIDQKQLVKLPGLSL 611
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 148/308 (48%), Gaps = 46/308 (14%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF ++F AL++ Y + A+ + DEMP+R +AS + + NG+ +A +F
Sbjct: 61 GFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMF 120
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
GD +V S G+ ++V S + G +E G+ +H ++G + V +GT+L++M
Sbjct: 121 -----GDARV--SGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSM 173
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE-AGLRPDGAA 293
YSRCG + ++FE++PH++VVT+ + I+GL +G F MR+ + P+
Sbjct: 174 YSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVT 233
Query: 294 YTAALVACS------HG----GLVEDGWRVFESM---------------RSEYGVYPMLE 328
+ A+ AC+ +G GLV FE+M +S Y V+ L+
Sbjct: 234 FVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELK 293
Query: 329 HY-----------GCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVL 377
G M++ G+ +E F+ ++ +KP+S W +L+ ++
Sbjct: 294 DTRNLISWNSVISGMMIN--GQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIE 351
Query: 378 AEKAKERV 385
A K ER+
Sbjct: 352 AFKFFERM 359
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 113/224 (50%), Gaps = 8/224 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF ++V +L++ Y G LA +F+++P + + +++ I NG S+F
Sbjct: 159 GFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVF 218
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M+ + P + V ++ I+A +SL L+ G +H + + +GTALI+M
Sbjct: 219 NLMRKFSSEEP---NDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDM 275
Query: 235 YSRCGSIDRSVKVFEEMPH-RNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
YS+C + VF E+ RN+++W S+I+G+ ++G+ A+ F + GL+PD A
Sbjct: 276 YSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSAT 335
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLL 337
+ + + S G V + ++ FE M S M+ C+ LL
Sbjct: 336 WNSLISGFSQLGKVIEAFKFFERMLS----VVMVPSLKCLTSLL 375
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 8/163 (4%)
Query: 196 VISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRN 255
++ + + LG + G +HA + + G + V TAL++MY + + ++KV +EMP R
Sbjct: 37 LLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERG 96
Query: 256 VVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRV-F 314
+ + + ++GL +G R+A R F D R +G + + L C G +E G ++
Sbjct: 97 IASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHC 153
Query: 315 ESMRSEYGVYPMLEHYGC-MVDLLGRAGMLLEAFKFVEDMPIK 356
+M+S + M + G +V + R G + A + E +P K
Sbjct: 154 LAMKSG---FEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHK 193
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 167/339 (49%), Gaps = 7/339 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G+ ++FV L++ Y + A +FD M +RD+ W+ +IV + G A+ F
Sbjct: 432 GYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFF 491
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+M + +DG + SVI A S + L G H R G + + AL++M
Sbjct: 492 IEMY----REKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDM 547
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y + G + + +F + ++ W S++ + HG +AL F + E G PD Y
Sbjct: 548 YGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTY 607
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
+ L ACSH G G ++ M+ E G+ +HY CMV+L+ +AG++ EA + +E P
Sbjct: 608 LSLLAACSHRGSTLQGKFLWNQMK-EQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSP 666
Query: 355 IKPNSV-IWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXX 413
N +WRTLL ACVN +L + A E++ +LDP ++LLSN Y
Sbjct: 667 PGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVA 726
Query: 414 XVRNSMRENRIVKEPGLSVVHI-DQVVHEFVSGDNSHPQ 451
+R +R K+PGLS + + + F SGD S+P+
Sbjct: 727 EMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPE 765
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 132/261 (50%), Gaps = 10/261 (3%)
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM-QLG 180
+ NAL++ Y S G + A ++F + +L SW+++I + NG+ +A+ +++++ ++
Sbjct: 337 LDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMS 396
Query: 181 DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGS 240
P+ E T + ISA + G +H + + G +V +GT L++MY +
Sbjct: 397 TPRPDEYT----FSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNRE 452
Query: 241 IDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVA 300
+ + KVF+ M R+VV WT +I G + G S A++ F +M R DG + ++ + A
Sbjct: 453 AESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGA 512
Query: 301 CSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSV 360
CS ++ G VF + G ++ G +VD+ G+ G E + + + P+
Sbjct: 513 CSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGK-YETAETIFSLASNPDLK 570
Query: 361 IWRTLLGACVNHNDLVLAEKA 381
W ++LGA H + EKA
Sbjct: 571 CWNSMLGAYSQHG---MVEKA 588
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 147/334 (44%), Gaps = 46/334 (13%)
Query: 1 MNRVYNLHATLIKTGQ---------HNNPLSLRTFFLRCAELPSADTASYAAAVLLRFPI 51
+ R +HA ++ G +NN +S+ ++RC L A +
Sbjct: 110 LKRARQIHALVLTAGAGAATESPYANNNLISM---YVRCGSLEQAR------------KV 154
Query: 52 PDPTPYNTVIRHLALHS-----PTLATTLF---SHMHRTGVTVDHFTFP---LIXXXXXX 100
D P+ V+ + AL+S P A+ F +HM V + TF +
Sbjct: 155 FDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLED 214
Query: 101 XXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVC 160
G++ N+ VQ +++ Y S G L A +FD + RD +W+T+IV
Sbjct: 215 VLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVG 274
Query: 161 FTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAG 220
N + L F+ M + + T + V++ S LG+ LG +HA I +
Sbjct: 275 SLKNDKIEDGLMFFRNMLMSGVDPTQFTYSI----VLNGCSKLGSYSLGKLIHARIIVSD 330
Query: 221 LGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFR 280
+PL AL++MY CG + + VF + + N+V+W S+I+G + +G +A+ +R
Sbjct: 331 SLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYR 390
Query: 281 D-MREAGLRPDGAAYTAALVACS------HGGLV 307
+R + RPD ++AA+ A + HG L+
Sbjct: 391 RLLRMSTPRPDEYTFSAAISATAEPERFVHGKLL 424
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 19/256 (7%)
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNN-GYPAEALSLFQQMQL 179
+ N LI+ Y GSL A +FD+MP R++ S++ L ++ N + + A L M
Sbjct: 133 YANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAF 192
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
+ ST S++ + L + +G +++ I + G V + T+++ MYS CG
Sbjct: 193 EYVKPNSST----FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCG 248
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
++ + ++F+ + +R+ V W ++I G + + + L FR+M +G+ P Y+ L
Sbjct: 249 DLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLN 308
Query: 300 ACSH------GGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
CS G L+ V +S+ L ++D+ G + EAF +V
Sbjct: 309 GCSKLGSYSLGKLIHARIIVSDSLAD-------LPLDNALLDMYCSCGDMREAF-YVFGR 360
Query: 354 PIKPNSVIWRTLLGAC 369
PN V W +++ C
Sbjct: 361 IHNPNLVSWNSIISGC 376
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 12/191 (6%)
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQ-MQL 179
+ N LI+ Y SL A +FD+MPQR++ + L F Y + SL Q ++L
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFE---YVSMGSSLHSQIIKL 79
Query: 180 GDPQ----VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA---LI 232
G Q +P + ++ + S+ L+ +HA + AG G A LI
Sbjct: 80 GSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLI 139
Query: 233 NMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVH-GRSREALRAFRDMREAGLRPDG 291
+MY RCGS++++ KVF++MPHRNVV++ +L + + + + A M ++P+
Sbjct: 140 SMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNS 199
Query: 292 AAYTAALVACS 302
+ +T+ + C+
Sbjct: 200 STFTSLVQVCA 210
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 162/314 (51%), Gaps = 6/314 (1%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
+I V AL+N Y S L+ A F+ M R++ SW+ +IV F NG EA+ LF QM
Sbjct: 275 DIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQML 334
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
L + Q E T SV+S+ + A+ V A + + G + + +LI+ YSR
Sbjct: 335 LENLQPDELT----FASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRN 390
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G++ ++ F + ++V+WTS+I LA HG + E+L+ F M + L+PD + L
Sbjct: 391 GNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVL 449
Query: 299 VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
ACSHGGLV++G R F+ M Y + EHY C++DLLGRAG + EA + MP +P+
Sbjct: 450 SACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPS 509
Query: 359 SVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNS 418
+ G C H + +++ E++P +Y +LSNAY +R
Sbjct: 510 THALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKR 569
Query: 419 MRENRI-VKEPGLS 431
R N K PG S
Sbjct: 570 ERRNCYNPKTPGCS 583
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 165/386 (42%), Gaps = 30/386 (7%)
Query: 1 MNRVYNLHATLIKTGQHNNPL---SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPY 57
++ V H ++K G +N+ L + + E AD + P+ + +
Sbjct: 52 LSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADK------LFDEMPLRNIVTW 105
Query: 58 NTVIRHLAL------HSPTLATTLFSHMHRTGVTVDHFTFP---LIXXXXXXXXXXXXXX 108
N +I + H L S + T V++DH +F +
Sbjct: 106 NILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLH 165
Query: 109 XXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPA 168
G S+ F +L++ YG G + A +F+ + RDL W+ L+ + NG
Sbjct: 166 CLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMID 225
Query: 169 EALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLG 228
EA L + M G + D S++SA +E G +HA + + +P+
Sbjct: 226 EAFGLLKLM--GSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVA 279
Query: 229 TALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLR 288
TAL+NMY++ + + + FE M RNVV+W ++I G A +G REA+R F M L+
Sbjct: 280 TALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQ 339
Query: 289 PDGAAYTAALVACSHGGLVEDGWRV--FESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
PD + + L +C+ + W + ++M ++ G L ++ R G L EA
Sbjct: 340 PDELTFASVLSSCAKFSAI---WEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEA 396
Query: 347 FKFVEDMPIKPNSVIWRTLLGACVNH 372
+ +P+ V W +++GA +H
Sbjct: 397 LLCFHSIR-EPDLVSWTSVIGALASH 421
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G A + V N+LI++Y +G+L+ A+ F + + DL SW+++I ++G+ E+L +F
Sbjct: 372 GSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMF 431
Query: 175 QQM-QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRR-AGLGLTVPLGTALI 232
+ M Q P D + L V+SA S G ++ G+ + + T LI
Sbjct: 432 ESMLQKLQP------DKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLI 485
Query: 233 NMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALR 277
++ R G ID + V MP + TG RE+++
Sbjct: 486 DLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMK 530
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 165/315 (52%), Gaps = 8/315 (2%)
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
+QN LI YG + AV +F + +L SW+ +I + N E LF+ ++L +
Sbjct: 618 LQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKL-E 676
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSI 241
P + + + ++SA + LG+ G+ H ++ R G + AL++MYS CG +
Sbjct: 677 P------NEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGML 730
Query: 242 DRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE-AGLRPDGAAYTAALVA 300
+ +KVF ++ W S+I+ HG +A+ F+++ + + P+ +++ + L A
Sbjct: 731 ETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSA 790
Query: 301 CSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSV 360
CSH G +++G ++ M ++GV P+ EH +VD+LGRAG L EA++F+ + +
Sbjct: 791 CSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAG 850
Query: 361 IWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMR 420
+W LL AC H D L ++ E + E++P + Y+ L+N Y +R +
Sbjct: 851 VWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVE 910
Query: 421 ENRIVKEPGLSVVHI 435
+N + K PG SV+ +
Sbjct: 911 DNALKKLPGYSVIDV 925
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 127/262 (48%), Gaps = 18/262 (6%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G + + NAL+N Y +L+ A +F M RD+ SW+T++ NG+P ++L F
Sbjct: 218 GLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYF 277
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLG--LTVPLGTALI 232
+ M G Q D V VISA SS+ L LG +H + ++G V +G ++I
Sbjct: 278 KSMT-GSGQ---EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSII 333
Query: 233 NMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREA-GLRPDG 291
+MYS+CG + + VFEE+ R+V++ +++ G A +G EA M+ ++PD
Sbjct: 334 SMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDI 393
Query: 292 AAYTAALVAC-----SHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
A + C S G G+ V M+S LE ++D+ G+ G+ +A
Sbjct: 394 ATVVSITSICGDLSFSREGRAVHGYTVRMEMQSR-----ALEVINSVIDMYGKCGLTTQA 448
Query: 347 FKFVEDMPIKPNSVIWRTLLGA 368
+ + + V W +++ A
Sbjct: 449 -ELLFKTTTHRDLVSWNSMISA 469
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 116/262 (44%), Gaps = 14/262 (5%)
Query: 134 GSLNLAVHLFDEMPQ-RDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVM 192
G L A + M + RDL SW+++I ++G+ E+L FQ M + D +
Sbjct: 527 GDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAM---SREGKIRHDLIT 583
Query: 193 MLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMP 252
+L ISA +LG + G H ++ L L LI MY RC I+ +VKVF +
Sbjct: 584 LLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLIS 643
Query: 253 HRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWR 312
N+ +W +I+ L+ + RE + FR+++ L P+ + L A + G G +
Sbjct: 644 DPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQ 700
Query: 313 V-FESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVN 371
+R + P + +VD+ GML K + + S W +++ A
Sbjct: 701 AHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKVFRNSGVNSISA-WNSVISA--- 754
Query: 372 HNDLVLAEKAKERVNELDPHHD 393
H + EKA E EL + +
Sbjct: 755 HGFHGMGEKAMELFKELSSNSE 776
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 59/282 (20%)
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM--QL 179
V N++I+ YG G A LF RDL SW+++I F+ NG+ +A +LF+++ +
Sbjct: 431 VINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEY 490
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
+ ST +L+++++ S +L G VH ++++ G L +A + +
Sbjct: 491 SCSKFSLST----VLAILTSCDSSDSLIFGKSVHCWLQKLG-----DLTSAFLRL----- 536
Query: 240 SIDRSVKVFEEMPH-RNVVTWTSLITGLAVHGRSREALRAFRDM-REAGLRPDGAAYTAA 297
E M R++ +W S+I+G A G E+LRAF+ M RE +R D
Sbjct: 537 ---------ETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGT 587
Query: 298 LVACSHGGLVEDGWRVF-----------------------------ESMRSEYGVY--PM 326
+ A + GLV G R F ES +G+ P
Sbjct: 588 ISASGNLGLVLQG-RCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPN 646
Query: 327 LEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGA 368
L + C++ L + E F+ ++ ++PN + + LL A
Sbjct: 647 LCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSA 688
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G ++ + L+ YG +G L + LFDE+ ++D+ W+++I NG A+ LF
Sbjct: 117 GLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLF 176
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+M + D +L SA+SSL +H GL L AL+N+
Sbjct: 177 IEMIHKGNEF----DSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNL 232
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y++ ++ + VF M HR++V+W +++T +G R++L+ F+ M +G D +
Sbjct: 233 YAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTF 292
Query: 295 TAALVACS-----------HGGLVEDGW 311
+ + ACS HG +++ G+
Sbjct: 293 SCVISACSSIEELTLGESLHGLVIKSGY 320
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF +N FV AL++ Y S G L + +F +++W+++I +G +A+ LF
Sbjct: 709 GFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELF 768
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYI-RRAGLGLTVPLGTALIN 233
+++ P + +S++SA S G ++ G+ + + + G+ +++
Sbjct: 769 KELSSNSEMEPNKSS---FISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVD 825
Query: 234 MYSRCGSIDRSVKVFEEM--PHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDG 291
M R G + + + + P + V W +L++ HG ++ + E + PD
Sbjct: 826 MLGRAGKLREAYEFITGIGEPQKAGV-WGALLSACNYHGDTKLGKEVAEVLFE--MEPDN 882
Query: 292 AAYTAALVACSHGGLVEDGWR 312
A+Y +L A ++ GL GW
Sbjct: 883 ASYYISL-ANTYVGL--GGWE 900
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 163/293 (55%), Gaps = 8/293 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMP----QRDLASWSTLIVCFTNNGYPAEA 170
G ++ NALI+ + + + + M + D+ SW+++I +N +A
Sbjct: 213 GIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKA 272
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
F+QM L P S +++++ A ++L ++ G +H Y GL + +A
Sbjct: 273 FDAFKQM-LTHGLYPNSAT---IITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSA 328
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
L++MY +CG I ++ +F + P + VT+ S+I A HG + +A+ F M G + D
Sbjct: 329 LLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLD 388
Query: 291 GAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFV 350
+TA L ACSH GL + G +F M+++Y + P LEHY CMVDLLGRAG L+EA++ +
Sbjct: 389 HLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMI 448
Query: 351 EDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAY 403
+ M ++P+ +W LL AC NH ++ LA A + + EL+P + G+ +LL++ Y
Sbjct: 449 KAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLY 501
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 125/260 (48%), Gaps = 8/260 (3%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G A + L+ Y G + A +FDEMP+RD++ +I NGY E+L F
Sbjct: 46 GIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFF 105
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
++M ++ D ++ S++ A +L E G +H + + + ++LI+M
Sbjct: 106 REMYKDGLKL----DAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDM 161
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
YS+ G + + KVF ++ +++V + ++I+G A + ++ EAL +DM+ G++PD +
Sbjct: 162 YSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITW 221
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLL---GRAGMLLEAFKFVE 351
A + SH E + E M + G P + + ++ L + +AFK +
Sbjct: 222 NALISGFSHMRNEEKVSEILELMCLD-GYKPDVVSWTSIISGLVHNFQNEKAFDAFKQML 280
Query: 352 DMPIKPNSVIWRTLLGACVN 371
+ PNS TLL AC
Sbjct: 281 THGLYPNSATIITLLPACTT 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%)
Query: 209 GIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAV 268
G +HA++ +G+ + L+ Y CG + + KVF+EMP R++ +I A
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 269 HGRSREALRAFRDMREAGLRPDG 291
+G +E+L FR+M + GL+ D
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDA 117
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 133/247 (53%), Gaps = 6/247 (2%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N + Y G + +V L + Q D SW+ I + + Y E + LF+ M Q
Sbjct: 483 NIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHML----Q 538
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLT-VPLGTALINMYSRCGSID 242
D +S++S S L L LG +H I + + LI+MY +CGSI
Sbjct: 539 SNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIR 598
Query: 243 RSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACS 302
+KVFEE +N++TWT+LI+ L +HG +EAL F++ G +PD ++ + L AC
Sbjct: 599 SVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACR 658
Query: 303 HGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIW 362
HGG+V++G +F+ M+ +YGV P ++HY C VDLL R G L EA + +MP ++ +W
Sbjct: 659 HGGMVKEGMGLFQKMK-DYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVW 717
Query: 363 RTLLGAC 369
RT L C
Sbjct: 718 RTFLDGC 724
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 126/282 (44%), Gaps = 33/282 (11%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G I V N+LI+AYG G+ ++A +F + D+ SW+ +I + P +AL LF
Sbjct: 245 GLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLF 304
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M P+ S + +SV+ S + L G +H + + G + LG ALI+
Sbjct: 305 VSM----PEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDF 360
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y++CG+++ S F+ + +N+V W +L++G A + L F M + G RP +
Sbjct: 361 YAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTF 419
Query: 295 TAALVACS-------HGGLVEDGWR----VFESMRSEYGVYPMLEHYGCMVD-------- 335
+ AL +C H +V G+ V S+ Y ++ ++D
Sbjct: 420 STALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSV 479
Query: 336 --------LLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGAC 369
+ R G E+ K + + +P++V W + AC
Sbjct: 480 VPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAAC 520
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 144/340 (42%), Gaps = 15/340 (4%)
Query: 40 SYAAAVLLRFPIPDPTPYNTVIRHLALHSPT-LATTLFSHMHRTGVTVDHFTFP-LIXXX 97
S A V + P + +NT+I+ + + A +FS M G + T L+
Sbjct: 66 SLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCA 125
Query: 98 XXXXXXXXXXXXXXXXXG-FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWST 156
G F ++ FV L+ YG L +A +F++MP + L +W+
Sbjct: 126 SLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNH 185
Query: 157 LIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYI 216
++ + G+ E + F+++ + ES+ L V+ VS + L++ +H
Sbjct: 186 MMSLLGHRGFLKECMFFFRELVRMGASLTESS----FLGVLKGVSCVKDLDISKQLHCSA 241
Query: 217 RRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREAL 276
+ GL + + +LI+ Y +CG+ + ++F++ ++V+W ++I A +AL
Sbjct: 242 TKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKAL 301
Query: 277 RAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDL 336
+ F M E G P+ Y + L S L+ G R M + G + ++D
Sbjct: 302 KLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCG-RQIHGMLIKNGCETGIVLGNALIDF 360
Query: 337 LGRAGMLLEA---FKFVEDMPIKPNSVIWRTLLGACVNHN 373
+ G L ++ F ++ D N V W LL N +
Sbjct: 361 YAKCGNLEDSRLCFDYIRD----KNIVCWNALLSGYANKD 396
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 99/187 (52%), Gaps = 13/187 (6%)
Query: 120 IFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
++V N +I+ Y G ++LA +FD+MP+R+ S++T+I ++ G +A +F +M+
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALEL--GIWVHAYIRRAGLGLT-VPLGTALINMYS 236
+ST +S + S +L++ G +H + GL + +GT L+ +Y
Sbjct: 109 FGYLPNQST--------VSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYG 160
Query: 237 RCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTA 296
R ++ + +VFE+MP +++ TW +++ L G +E + FR++ G +++
Sbjct: 161 RLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLG 220
Query: 297 AL--VAC 301
L V+C
Sbjct: 221 VLKGVSC 227
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 16/223 (7%)
Query: 52 PDPTPYNTVIRHLA---LHSPTLATTLFSHMHRTGVTVDHFTF----PLIXXXXXXXXXX 104
PD +N I + H + LF HM ++ + D +TF L
Sbjct: 508 PDTVSWNIAIAACSRSDYHEEVIE--LFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGS 565
Query: 105 XXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNN 164
++ FV N LI+ YG GS+ + +F+E +++L +W+ LI C +
Sbjct: 566 SIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIH 625
Query: 165 GYPAEALSLFQQ-MQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGL 223
GY EAL F++ + LG D V +S+++A G ++ G+ + ++ G+
Sbjct: 626 GYGQEALEKFKETLSLG-----FKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEP 680
Query: 224 TVPLGTALINMYSRCGSIDRSVKVFEEMPH-RNVVTWTSLITG 265
+ +++ +R G + + + EMP + W + + G
Sbjct: 681 EMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDG 723
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 4/127 (3%)
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
+I++Y + G + + KVF++MP RN V++ ++I G + +G +A F +MR G P+
Sbjct: 55 IISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPN 114
Query: 291 GAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYG-CMVDLLGRAGMLLEAFKF 349
+ + L++C+ V G ++ + +YG++ G C++ L GR +L A +
Sbjct: 115 QST-VSGLLSCASLD-VRAGTQL-HGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQV 171
Query: 350 VEDMPIK 356
EDMP K
Sbjct: 172 FEDMPFK 178
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 174/325 (53%), Gaps = 9/325 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTN-NGYPAEALSL 173
GF + + +L+NAY GSL A L + +RDL S + LI F+ N ++A +
Sbjct: 244 GFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDI 303
Query: 174 FQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAY-IRRAGLGLTVPLGTALI 232
F+ M ++ D V++ S++ +++ ++ +G +H + ++ + + V LG +LI
Sbjct: 304 FKDM----IRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLI 359
Query: 233 NMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGA 292
+MY++ G I+ +V FEEM ++V +WTSLI G HG +A+ + M ++P+
Sbjct: 360 DMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDV 419
Query: 293 AYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVED 352
+ + L ACSH G E GW+++++M +++G+ EH C++D+L R+G L EA+ +
Sbjct: 420 TFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRS 479
Query: 353 MP--IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXX 410
+ +S W L AC H ++ L++ A ++ ++P +Y+ L++ Y
Sbjct: 480 KEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWD 539
Query: 411 XXXXVRNSMREN-RIVKEPGLSVVH 434
R M+E+ K PG S+V+
Sbjct: 540 NALNTRKLMKESGSCNKAPGYSLVY 564
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 102/186 (54%), Gaps = 4/186 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF SN+ +++ LI+ Y G + A LFD + +RD+ SW+ +I F+ GY +AL LF
Sbjct: 42 GFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLF 101
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
++M D + + T G SV+ + LG L+ G+ +H + + + + +AL+++
Sbjct: 102 KEMHREDVKANQFTYG----SVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSL 157
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y+RCG ++ + F+ M R++V+W ++I G + + + F+ M G +PD +
Sbjct: 158 YARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTF 217
Query: 295 TAALVA 300
+ L A
Sbjct: 218 GSLLRA 223
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 139/341 (40%), Gaps = 52/341 (15%)
Query: 72 ATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXX---XXXXXGFASNIFVQNALIN 128
A LF MHR V + FT+ + A N+ V++AL++
Sbjct: 97 ALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLS 156
Query: 129 AYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPEST 188
Y G + A FD M +RDL SW+ +I +T N + SLFQ M L + + P
Sbjct: 157 LYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLM-LTEGKKP--- 212
Query: 189 DGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVF 248
D S++ A + LE+ +H + G G + L +L+N Y +CGS+ + K+
Sbjct: 213 DCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLH 272
Query: 249 EEMPHRNVVTWTSLITGLAVHGR-SREALRAFRDMREAGLRPDGAAYTAALVACS----- 302
E R++++ T+LITG + + +A F+DM + D ++ L C+
Sbjct: 273 EGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASV 332
Query: 303 ------HG-------------------------GLVEDGWRVFESMRSEYGVYPMLEHYG 331
HG G +ED FE M+ + + +
Sbjct: 333 TIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKD-----VRSWT 387
Query: 332 CMVDLLGRAGMLLEAFKFVEDMP---IKPNSVIWRTLLGAC 369
++ GR G +A M IKPN V + +LL AC
Sbjct: 388 SLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSAC 428
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 220 GLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAF 279
G + L LI++Y + G + + K+F+ + R+VV+WT++I+ + G +AL F
Sbjct: 42 GFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLF 101
Query: 280 RDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGR 339
++M ++ + Y + L +C G +++G ++ S +E C +L+ R
Sbjct: 102 KEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGS----------VEKGNCAGNLIVR 151
Query: 340 AGML 343
+ +L
Sbjct: 152 SALL 155
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 167/331 (50%), Gaps = 10/331 (3%)
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
V+N+LI Y L A +F ++ L++W+++I F N E L ++M L
Sbjct: 359 VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSG 418
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYI-RRAGLGLTVPLGTALINMYSRCGS 240
+ + + S++ + +G L+ G H YI RR + L +L++MY++ G
Sbjct: 419 FH----PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 241 IDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVA 300
I + +VF+ M R+ VT+TSLI G G+ AL F+DM +G++PD A L A
Sbjct: 475 IIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSA 534
Query: 301 CSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSV 360
CSH LV +G +F M +G+ LEHY CMVDL RAG L +A +P +P+S
Sbjct: 535 CSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSA 594
Query: 361 IWRTLLGACVNHNDLVLAEKAKER-VNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSM 419
+ TLL AC+ H + + E A ++ + E P H G Y+LL++ Y V+ +
Sbjct: 595 MCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLL 654
Query: 420 RENRIVKEPGLSVVHIDQVVHEFVSGDNSHP 450
+ + K +++ D + G+N+ P
Sbjct: 655 SDLGVQKAHEFALMETDSE----LDGENNKP 681
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 178/450 (39%), Gaps = 91/450 (20%)
Query: 6 NLHATLIKTGQHNNPL---SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVI- 61
LHA I +G + + L TF+ L A T + + +L P P+N +I
Sbjct: 104 QLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL------HPLPWNVLIG 157
Query: 62 RHLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXXXXXGFAS--- 118
++ + +++ M G+ D FT+P + +S
Sbjct: 158 SYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRC 217
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N++V NALI+ Y G +++A LFD M +RD SW+ +I C+T+ EA L +M
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 179 LGDPQVPEST-------------------------------DGVMMLSVISAVSSLGALE 207
L + T V M++ + A S +GAL+
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK 337
Query: 208 LGIWVHAY-IRRAGLGLTVP-LGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITG 265
G H IR + + +LI MYSRC + + VF+++ ++ TW S+I+G
Sbjct: 338 WGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISG 397
Query: 266 LAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDG--------------- 310
A + RS E ++M +G P+ + L + G ++ G
Sbjct: 398 FAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKD 457
Query: 311 ----W-----------------RVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKF 349
W RVF+SMR V Y ++D GR G A +
Sbjct: 458 CLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVT-----YTSLIDGYGRLGKGEVALAW 512
Query: 350 VEDMP---IKPNSVIWRTLLGACVNHNDLV 376
+DM IKP+ V +L AC +H++LV
Sbjct: 513 FKDMDRSGIKPDHVTMVAVLSAC-SHSNLV 541
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 112/258 (43%), Gaps = 17/258 (6%)
Query: 22 SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLALHSPTLATT-LFSHMH 80
SL T + RC++L +A V + + +N++I A + + T+ L M
Sbjct: 362 SLITMYSRCSDL------RHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEML 415
Query: 81 RTGVTVDHFTF----PLIXXXXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGSL 136
+G +H T PL + + + N+L++ Y SG +
Sbjct: 416 LSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEI 475
Query: 137 NLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSV 196
A +FD M +RD ++++LI + G AL+ F+ M + D V M++V
Sbjct: 476 IAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIK----PDHVTMVAV 531
Query: 197 ISAVSSLGALELGIWVHAYIRRA-GLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR- 254
+SA S + G W+ + G+ L + + ++++Y R G +D++ +F +P+
Sbjct: 532 LSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEP 591
Query: 255 NVVTWTSLITGLAVHGRS 272
+ +L+ +HG +
Sbjct: 592 SSAMCATLLKACLIHGNT 609
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 167/331 (50%), Gaps = 10/331 (3%)
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
V+N+LI Y L A +F ++ L++W+++I F N E L ++M L
Sbjct: 359 VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSG 418
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYI-RRAGLGLTVPLGTALINMYSRCGS 240
+ + + S++ + +G L+ G H YI RR + L +L++MY++ G
Sbjct: 419 FH----PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 241 IDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVA 300
I + +VF+ M R+ VT+TSLI G G+ AL F+DM +G++PD A L A
Sbjct: 475 IIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSA 534
Query: 301 CSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSV 360
CSH LV +G +F M +G+ LEHY CMVDL RAG L +A +P +P+S
Sbjct: 535 CSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSA 594
Query: 361 IWRTLLGACVNHNDLVLAEKAKER-VNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSM 419
+ TLL AC+ H + + E A ++ + E P H G Y+LL++ Y V+ +
Sbjct: 595 MCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLL 654
Query: 420 RENRIVKEPGLSVVHIDQVVHEFVSGDNSHP 450
+ + K +++ D + G+N+ P
Sbjct: 655 SDLGVQKAHEFALMETDSE----LDGENNKP 681
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 178/450 (39%), Gaps = 91/450 (20%)
Query: 6 NLHATLIKTGQHNNPL---SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVI- 61
LHA I +G + + L TF+ L A T + + +L P P+N +I
Sbjct: 104 QLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL------HPLPWNVLIG 157
Query: 62 RHLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXXXXXGFAS--- 118
++ + +++ M G+ D FT+P + +S
Sbjct: 158 SYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRC 217
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N++V NALI+ Y G +++A LFD M +RD SW+ +I C+T+ EA L +M
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 179 LGDPQVPEST-------------------------------DGVMMLSVISAVSSLGALE 207
L + T V M++ + A S +GAL+
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK 337
Query: 208 LGIWVHAY-IRRAGLGLTVP-LGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITG 265
G H IR + + +LI MYSRC + + VF+++ ++ TW S+I+G
Sbjct: 338 WGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISG 397
Query: 266 LAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDG--------------- 310
A + RS E ++M +G P+ + L + G ++ G
Sbjct: 398 FAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKD 457
Query: 311 ----W-----------------RVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKF 349
W RVF+SMR V Y ++D GR G A +
Sbjct: 458 CLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVT-----YTSLIDGYGRLGKGEVALAW 512
Query: 350 VEDMP---IKPNSVIWRTLLGACVNHNDLV 376
+DM IKP+ V +L AC +H++LV
Sbjct: 513 FKDMDRSGIKPDHVTMVAVLSAC-SHSNLV 541
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 112/258 (43%), Gaps = 17/258 (6%)
Query: 22 SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLALHSPTLATT-LFSHMH 80
SL T + RC++L +A V + + +N++I A + + T+ L M
Sbjct: 362 SLITMYSRCSDL------RHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEML 415
Query: 81 RTGVTVDHFTF----PLIXXXXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGSL 136
+G +H T PL + + + N+L++ Y SG +
Sbjct: 416 LSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEI 475
Query: 137 NLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSV 196
A +FD M +RD ++++LI + G AL+ F+ M + D V M++V
Sbjct: 476 IAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIK----PDHVTMVAV 531
Query: 197 ISAVSSLGALELGIWVHAYIRRA-GLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR- 254
+SA S + G W+ + G+ L + + ++++Y R G +D++ +F +P+
Sbjct: 532 LSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEP 591
Query: 255 NVVTWTSLITGLAVHGRS 272
+ +L+ +HG +
Sbjct: 592 SSAMCATLLKACLIHGNT 609
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 166/335 (49%), Gaps = 15/335 (4%)
Query: 230 ALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRP 289
+I MYS C S D ++ VF EMP RN TW ++I LA +G A+ F E G +P
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 290 DGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKF 349
D + A AC G + +G FESM +YG+ +E Y ++++L G L EA F
Sbjct: 208 DKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDF 267
Query: 350 VEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXX 409
VE M ++P+ +W TL+ C L L ++ E + +LD SNA
Sbjct: 268 VERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKE---SNAGLVAAKA 324
Query: 410 XXXXXVR-NSMRENRIVKEPGLSVVHIDQVVHEFVSGDNSHPQWEEIMKFL-VSVVDTIK 467
+ +R +++++ + +HEF +GD SH + L V ++D
Sbjct: 325 SDSAMEKLKELRYCQMIRDDP------KKRMHEFRAGDTSHLGTVSAFRSLKVQMLDI-- 376
Query: 468 LGGYAPNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKNLRICYDCHS 527
G+ P T ++EEEKE L + S KLA A ++ R+ + V++N+R C D H+
Sbjct: 377 --GFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHN 434
Query: 528 FMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
K +S I + +I RD+ ++H + G CSC D+W
Sbjct: 435 TFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
Query: 125 ALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQV 184
+I Y S + A+++F+EMP+R+ +W T+I C NG A+ +F + + +
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRF-IEEGNK 206
Query: 185 PESTDGVMMLSVISAVSSLGALELGIW-VHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
P D + +V A S+G + G+ + R G+ L++ +I M + CG +D
Sbjct: 207 P---DKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDE 263
Query: 244 SVKVFEEMP-HRNVVTWTSLITGLAVHG 270
++ E M +V W +L+ V G
Sbjct: 264 ALDFVERMTVEPSVEMWETLMNLCWVQG 291
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 163/353 (46%), Gaps = 38/353 (10%)
Query: 122 VQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNG---------------- 165
VQN+L++ Y G+L+LA LF E+P+RD+ SW+++I NG
Sbjct: 155 VQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKN 214
Query: 166 ---------------YPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGI 210
P ++SLF++M Q EST ++ +++A L+ G
Sbjct: 215 IISWNIMISAYLGANNPGVSISLFREMVRAGFQGNEST----LVLLLNACGRSARLKEGR 270
Query: 211 WVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHG 270
VHA + R L +V + TALI+MY +C + + ++F+ + RN VTW +I +HG
Sbjct: 271 SVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHG 330
Query: 271 RSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHY 330
R L F M LRPD + L C+ GLV G + M E+ + P H
Sbjct: 331 RPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQ 390
Query: 331 GCMVDLLGRAGMLLEAFKFVEDMP---IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNE 387
CM +L AG EA + ++++P + P S W LL + + L E + + E
Sbjct: 391 WCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIE 450
Query: 388 LDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVH 440
DP + Y LL N Y VR ++E +I + PG +V + ++VH
Sbjct: 451 TDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 103/235 (43%), Gaps = 41/235 (17%)
Query: 167 PAEALSL-FQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTV 225
P +AL F ++ G VP D +S+IS + ++ G H + G +
Sbjct: 99 PKQALGFYFDILRFG--FVP---DSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVL 153
Query: 226 PLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREA---------- 275
P+ +L++MY+ CG++D + K+F E+P R++V+W S+I G+ +G A
Sbjct: 154 PVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDK 213
Query: 276 ---------------------LRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVF 314
+ FR+M AG + + + L AC +++G V
Sbjct: 214 NIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVH 273
Query: 315 ESM-RSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGA 368
S+ R+ +++ ++D+ G+ + A + + + I+ N V W ++ A
Sbjct: 274 ASLIRTFLNSSVVIDT--ALIDMYGKCKEVGLARRIFDSLSIR-NKVTWNVMILA 325
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 190/407 (46%), Gaps = 10/407 (2%)
Query: 41 YAAAVLLRFPIPDPTPYNTVIRHLALH-SPTLATTLFSHMHRTGVTVDHFTFPL---IXX 96
YA +V L D +N +I + + +A F M + D +T + I
Sbjct: 187 YALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICS 246
Query: 97 XXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWST 156
GF SN V A I+ + L+ +V LF E+ + D ++
Sbjct: 247 DLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNS 306
Query: 157 LIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYI 216
+I ++ + +AL LF + + P+ +LS ++AV L+ G VH+ +
Sbjct: 307 MIGSYSWHCCGEDALRLFI-LAMTQSVRPDKFTFSSVLSSMNAV----MLDHGADVHSLV 361
Query: 217 RRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREAL 276
+ G L + T+L+ MY + GS+D ++ VF + ++++ W ++I GLA + R+ E+L
Sbjct: 362 IKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESL 421
Query: 277 RAFRDM-REAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVD 335
F + L+PD LVAC + G V +G ++F SM +GV P EHY C+++
Sbjct: 422 AIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIE 481
Query: 336 LLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGD 395
LL R GM+ EA + +P +P+S IW +L A ++ D LAE + + E +P
Sbjct: 482 LLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFP 541
Query: 396 YVLLSNAYXXXXXXXXXXXVRNSMRENRIVKEPGLSVVHIDQVVHEF 442
Y++L Y +R +M E+++ G S + I+ V F
Sbjct: 542 YLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 118/251 (47%), Gaps = 10/251 (3%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N N + +G LN A+ LFDEMP+RD+ SW+T+I + G+ + +F MQ
Sbjct: 69 NTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQ 128
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLG-LTVPLGTALINMYSR 237
+ + E T ++ S+++ V G +H +G+ + + ++++MY R
Sbjct: 129 RWEIRPTEFTFSILA-SLVTCVRH------GEQIHGNAICSGVSRYNLVVWNSVMDMYRR 181
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
G D ++ VF M R+VV+W LI + G AL F MRE ++PD +
Sbjct: 182 LGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMV 241
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
+ CS + G + ++ + G G +D+ + L ++ K ++ K
Sbjct: 242 VSICSDLRELSKGKQAL-ALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE-KW 299
Query: 358 NSVIWRTLLGA 368
+SV+ +++G+
Sbjct: 300 DSVLCNSMIGS 310
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 212 VHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGR 271
VHA + AG T G + +Y + GS+ ++++F+++P +N +TW + GL +G
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 272 SREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMR 318
AL F +M E + + LV+C G E G RVF M+
Sbjct: 86 LNNALDLFDEMPERDV-VSWNTMISGLVSC---GFHEYGIRVFFDMQ 128
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 154/295 (52%), Gaps = 13/295 (4%)
Query: 46 LLRFPI-PDPTPYNTVIRHLALHS-PTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXX 103
+LR + P+ T + VI + + P+L +L + V ++ F +
Sbjct: 255 MLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRD 314
Query: 104 XXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTN 163
G N+ NA+I+ Y G ++ A LFD MP+R++ SW++LI + +
Sbjct: 315 IQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAH 374
Query: 164 NGYPAEALSLFQQM-QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLG 222
NG A A+ F+ M GD + D V M+SV+SA + LELG + YIR+ +
Sbjct: 375 NGQAALAIEFFEDMIDYGDSK----PDEVTMISVLSACGHMADLELGDCIVDYIRKNQIK 430
Query: 223 LTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM 282
L +LI MY+R G++ + +VF+EM R+VV++ +L T A +G E L M
Sbjct: 431 LNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKM 490
Query: 283 REAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLL 337
++ G+ PD YT+ L AC+ GL+++G R+F+S+R+ P+ +HY CM DLL
Sbjct: 491 KDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM-DLL 539
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 131/282 (46%), Gaps = 35/282 (12%)
Query: 126 LINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM-QLGDPQV 184
+I + L A FD MP++ + SW+ ++ + NG+ +AL LF M +LG
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLG--VR 261
Query: 185 PESTDGVMMLSVI------SAVSSLGAL--ELGIWVHAYIRRAGLGLTVP---------- 226
P T V+++S S SL L E + ++ +++ A L +
Sbjct: 262 PNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRI 321
Query: 227 ---LGT--------ALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREA 275
LGT A+I+ Y+R G + + ++F+ MP RNVV+W SLI G A +G++ A
Sbjct: 322 FNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALA 381
Query: 276 LRAFRDMREAG-LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMV 334
+ F DM + G +PD + L AC H +E G + + +R + Y ++
Sbjct: 382 IEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN-QIKLNDSGYRSLI 440
Query: 335 DLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLV 376
+ R G L EA + ++M + + V + TL A + D V
Sbjct: 441 FMYARGGNLWEAKRVFDEMK-ERDVVSYNTLFTAFAANGDGV 481
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 132/335 (39%), Gaps = 77/335 (22%)
Query: 75 LFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSG 134
L+ R G+ D F+FP++ GF + +V+N +++ Y
Sbjct: 93 LYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVEKL--GFFKDPYVRNVIMDMYVKHE 150
Query: 135 SLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMML 194
S+ A +FD++ QR + W+ +I + G EA LF M PE+
Sbjct: 151 SVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMM-------PEN------- 196
Query: 195 SVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR 254
V+S W T +I +++ ++ + K F+ MP +
Sbjct: 197 DVVS------------W-----------------TVMITGFAKVKDLENARKYFDRMPEK 227
Query: 255 NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGG--------- 305
+VV+W ++++G A +G + +ALR F DM G+RP+ + + ACS
Sbjct: 228 SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLV 287
Query: 306 -LVED------------------GWRVFESMR---SEYGVYPMLEHYGCMVDLLGRAGML 343
L+++ R +S R +E G L + M+ R G +
Sbjct: 288 KLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDM 347
Query: 344 LEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLA 378
A + + MP K N V W +L+ ++ LA
Sbjct: 348 SSARQLFDTMP-KRNVVSWNSLIAGYAHNGQAALA 381
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 145/272 (53%), Gaps = 6/272 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQ-RDLASWSTLIVCFTNNGYPAEALSL 173
G+ +N+ V NAL++ YG G+L A F +M + RD SW+ L+ G +ALS
Sbjct: 425 GYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSF 484
Query: 174 FQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALIN 233
F+ MQ V + ++++ +++ AL LG +H ++ R G + V + A+++
Sbjct: 485 FEGMQ-----VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVD 539
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
MYS+C D +++VF+E R+++ W S+I G +GRS+E F + G++PD
Sbjct: 540 MYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVT 599
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+ L AC G VE G++ F SM ++Y + P +EHY CM++L + G L + +F+ M
Sbjct: 600 FLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLM 659
Query: 354 PIKPNSVIWRTLLGACVNHNDLVLAEKAKERV 385
P P + + AC + L A +R+
Sbjct: 660 PFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 131/288 (45%), Gaps = 43/288 (14%)
Query: 127 INAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPE 186
++ Y SG A LFD MP+R++ SW+ ++ + + EAL M+ Q E
Sbjct: 336 MSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMR----QEIE 391
Query: 187 STDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVK 246
+ D V ++ +++ S + +++G H +I R G V + AL++MY +CG++ +
Sbjct: 392 NIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANI 451
Query: 247 VFEEMPH-RNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACS--- 302
F +M R+ V+W +L+TG+A GRS +AL F M + +P L C+
Sbjct: 452 WFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIP 510
Query: 303 --------HGGLVEDGWRVFESMRS------------EYGVYPMLEH------------Y 330
HG L+ DG+++ +R +Y + E
Sbjct: 511 ALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIR 570
Query: 331 GCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLA 378
GC + GR+ + E F +E+ +KP+ V + +L AC+ + L
Sbjct: 571 GCCRN--GRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELG 616
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 96/191 (50%), Gaps = 4/191 (2%)
Query: 120 IFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
IF+ N I AYG G ++ A LF+EMP+RD SW+ +I NG E +F++M
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
+ E++ V+ + + L L +H + + G V L T+++++Y +C
Sbjct: 156 DGVRATETS----FAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCR 211
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
+ + +VF+E+ + + V+W ++ G + EA+ F M E +RP ++ ++
Sbjct: 212 VMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVML 271
Query: 300 ACSHGGLVEDG 310
ACS +E G
Sbjct: 272 ACSRSLALEVG 282
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 111/240 (46%), Gaps = 10/240 (4%)
Query: 50 PIPDPTPYNTVIRHLALHSPTLAT-TLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXX 108
P D +N VI A + + +F M+R GV +F +
Sbjct: 123 PERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLR 182
Query: 109 X---XXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNG 165
G++ N+ ++ ++++ YG ++ A +FDE+ SW+ ++ + G
Sbjct: 183 QLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMG 242
Query: 166 YPAEALSLFQQM-QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLT 224
+ EA+ +F +M +L + + VM+ A S ALE+G +HA + +
Sbjct: 243 FNDEAVVMFFKMLELNVRPLNHTVSSVML-----ACSRSLALEVGKVIHAIAVKLSVVAD 297
Query: 225 VPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE 284
+ T++ +MY +C ++ + +VF++ +++ +WTS ++G A+ G +REA F M E
Sbjct: 298 TVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPE 357
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 8/138 (5%)
Query: 232 INMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDG 291
I Y +CG +D + ++FEEMP R+ +W ++IT A +G S E R FR M G+R
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATE 162
Query: 292 AAYTAALVACSHGGLVEDGWRVFESMRS---EYGVYPMLEHYGCMVDLLGRAGMLLEAFK 348
++ L +C GL+ D R+ + +YG ++ +VD+ G+ ++ +A +
Sbjct: 163 TSFAGVLKSC---GLILD-LRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARR 218
Query: 349 FVEDMPIKPNSVIWRTLL 366
+++ + P+ V W ++
Sbjct: 219 VFDEI-VNPSDVSWNVIV 235
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 206/441 (46%), Gaps = 25/441 (5%)
Query: 6 NLHATLIKTGQHNNPL----SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVI 61
LH+ ++K+G + + + L ++ C +L S S+ A P D +N+++
Sbjct: 234 QLHSLVVKSGWNISNIFVANVLVDYYSACGDL-SGSMRSFNAV-----PEKDVISWNSIV 287
Query: 62 RHLALHSPTL-ATTLFSHMHRTGV--TVDHF-TFPLIXXXXXXXXXXXXXXXXXXXXGF- 116
A + L + LFS M G ++ F +F GF
Sbjct: 288 SVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFD 347
Query: 117 ASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQ 176
S++ VQ+ALI+ YG + + L+ +P +L ++L+ + G + + +F
Sbjct: 348 VSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGL 407
Query: 177 MQLGDPQVPEST--DGVMMLSVISAVS-SL-GALELGIWVHAYIRRAGLGLTVPLGTALI 232
M + E T D V + +V+ A+S SL +L VH ++G V + +LI
Sbjct: 408 M------IDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLI 461
Query: 233 NMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGA 292
+ Y++ G + S KVF+E+ N+ TS+I G A +G + ++ R+M L PD
Sbjct: 462 DAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEV 521
Query: 293 AYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVED 352
+ L CSH GLVE+G +F+S+ S+YG+ P + Y CMVDLLGRAG++ +A + +
Sbjct: 522 TILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQ 581
Query: 353 MPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXX 412
+ V W +LL +C H + + +A E + L+P + Y+ +S Y
Sbjct: 582 ARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEIS 641
Query: 413 XXVRNSMRENRIVKEPGLSVV 433
+R +++E G S V
Sbjct: 642 RQIREIAASRELMREIGYSSV 662
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 125/270 (46%), Gaps = 9/270 (3%)
Query: 49 FPIPDPTPYNTVIRHLALHSPTL-ATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXX 107
+ D YN +I + + +L A L++ M G+ TFP +
Sbjct: 72 MSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREG 131
Query: 108 XXX---XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNN 164
GF N+FV++AL+ Y +++A+ LFDEM R+LA + L+ CF
Sbjct: 132 IQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQT 191
Query: 165 GYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLT 224
G ++ +M+L + +G+ +I S + G +H+ + ++G ++
Sbjct: 192 GESKRLFEVYLRMELEGV----AKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNIS 247
Query: 225 -VPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMR 283
+ + L++ YS CG + S++ F +P ++V++W S+++ A +G ++L F M+
Sbjct: 248 NIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQ 307
Query: 284 EAGLRPDGAAYTAALVACSHGGLVEDGWRV 313
G RP + + L CS ++ G ++
Sbjct: 308 FWGKRPSIRPFMSFLNFCSRNSDIQSGKQI 337
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 116/258 (44%), Gaps = 7/258 (2%)
Query: 120 IFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
++ N I+ SG+L A FDEM RD+ +++ LI + G A+ L+ +M
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
+ ST SV+S S GI VH + G G + + +AL+ +Y+
Sbjct: 106 CGLRESAST----FPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLR 161
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
+D ++K+F+EM RN+ L+ G S+ + M G+ +G Y +
Sbjct: 162 LVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIR 221
Query: 300 ACSHGGLVEDGWRVFE-SMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPN 358
CSH LV +G ++ ++S + + + +VD G L + + +P K +
Sbjct: 222 GCSHDRLVYEGKQLHSLVVKSGWNISNIFVA-NVLVDYYSACGDLSGSMRSFNAVPEK-D 279
Query: 359 SVIWRTLLGACVNHNDLV 376
+ W +++ C ++ ++
Sbjct: 280 VISWNSIVSVCADYGSVL 297
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 160/314 (50%), Gaps = 8/314 (2%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQ 183
N LI+A+ SG N A + +MP + +SW+T++ + N+ EA F +M +
Sbjct: 258 NELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVR 317
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
E + +++ +V + G +HA + GL V + +ALI+MYS+CG +
Sbjct: 318 FDEYSLSIVLAAVAALAVV----PWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKH 373
Query: 244 SVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMR-EAGLRPDGAAYTAALVACS 302
+ +F MP +N++ W +I+G A +G S EA++ F ++ E L+PD + L CS
Sbjct: 374 AELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCS 433
Query: 303 HGGL-VEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVI 361
H + +E FE M +EY + P +EH ++ +G+ G + +A + +++ + V
Sbjct: 434 HCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVA 493
Query: 362 WRTLLGACVNHNDLVLAEKAKERVNELDPHHDGD--YVLLSNAYXXXXXXXXXXXVRNSM 419
WR LLGAC DL A+ ++ EL + Y+++SN Y +R M
Sbjct: 494 WRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIM 553
Query: 420 RENRIVKEPGLSVV 433
RE+ ++KE G S +
Sbjct: 554 RESGVLKEVGSSWI 567
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 117/258 (45%), Gaps = 46/258 (17%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
GF SN + N+L+ Y +S SL A +FDEMP D+ SW++L+ + +G E + LF
Sbjct: 85 GFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLF 144
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGL-TVPLGTALIN 233
++ D E + + ++A + L LG +H+ + + GL V +G LI+
Sbjct: 145 LELHRSDVFPNEFS----FTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLID 200
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
MY +CG +D +V VF+ M ++ V+W +++
Sbjct: 201 MYGKCGFMDDAVLVFQHMEEKDTVSWNAIVA----------------------------- 231
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+CS G +E G F M + P Y ++D ++G AF+ + DM
Sbjct: 232 ------SCSRNGKLELGLWFFHQMPN-----PDTVTYNELIDAFVKSGDFNNAFQVLSDM 280
Query: 354 PIKPNSVIWRTLLGACVN 371
P PNS W T+L VN
Sbjct: 281 P-NPNSSSWNTILTGYVN 297
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 14/230 (6%)
Query: 153 SWSTLIVC---FTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELG 209
SWST++ F + G A+ L + D + P+++ V +L V + G + L
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVEL-----INDGEKPDASPLVHLLRV---SGNYGYVSLC 74
Query: 210 IWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVH 269
+H Y+ + G L +L+ Y S++ + KVF+EMP +V++W SL++G
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 270 GRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEH 329
GR +E + F ++ + + P+ ++TAAL AC+ L G S + G+
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLG-ACIHSKLVKLGLEKGNVV 193
Query: 330 YG-CMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLA 378
G C++D+ G+ G + +A + M K ++V W ++ +C + L L
Sbjct: 194 VGNCLIDMYGKCGFMDDAVLVFQHMEEK-DTVSWNAIVASCSRNGKLELG 242
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 119/312 (38%), Gaps = 56/312 (17%)
Query: 10 TLIKTGQHNNPLSLRTFFLRCAELPSADTASY---------------AAAVLLRFPIPDP 54
++ + N L L +F ++P+ DT +Y A VL P P+
Sbjct: 228 AIVASCSRNGKLELGLWFFH--QMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNS 285
Query: 55 TPYNTVIR-HLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXX---XXXXXX 110
+ +NT++ ++ AT F+ MH +GV D ++ ++
Sbjct: 286 SSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHAC 345
Query: 111 XXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEA 170
G S + V +ALI+ Y G L A +F MP+++L W+ +I + NG EA
Sbjct: 346 AHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEA 405
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
+ LF Q++ P+ + +L+V S + LG +
Sbjct: 406 IKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYF-----------------EM 448
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
+IN Y S++ + M R E +A + ++E G D
Sbjct: 449 MINEYRIKPSVEHCCSLIRAMGQRG------------------EVWQAKQVIQEFGFGYD 490
Query: 291 GAAYTAALVACS 302
G A+ A L ACS
Sbjct: 491 GVAWRALLGACS 502
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 168/372 (45%), Gaps = 21/372 (5%)
Query: 72 ATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXXXXXGFASN--IFVQNALINA 129
A +F+ M+R V + FT + + + A+I+
Sbjct: 169 ALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISF 228
Query: 130 YGSSGSLNLAVHLFDEMP-QRDLASWSTLIV-CFTNNGYPAEALSLFQQMQLGDPQVPES 187
Y S G +N A+ +++ + D ++LI C N Y L + +Q P V
Sbjct: 229 YSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ----RPNVR-- 282
Query: 188 TDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKV 247
++ S ++ S L +G +H R G L L++MY +CG I ++ +
Sbjct: 283 ----VLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTI 338
Query: 248 FEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMRE--AGLRPDGAAYTAALVACSHGG 305
F +P ++VV+WTS+I AV+G +AL FR+M E +G+ P+ + + AC+H G
Sbjct: 339 FRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAG 398
Query: 306 LVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNS----VI 361
LV++G F M+ +Y + P EHY C +D+L +AG E ++ VE M N I
Sbjct: 399 LVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAI 458
Query: 362 WRTLLGACVNHNDLVLAEKAKERV-NELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMR 420
W +L AC + DL E R+ E P + YVL+SN Y +R ++
Sbjct: 459 WVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLK 518
Query: 421 ENRIVKEPGLSV 432
+VK G S+
Sbjct: 519 NKGLVKTAGHSL 530
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 118/236 (50%), Gaps = 6/236 (2%)
Query: 139 AVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVIS 198
A HLFDE+PQRDL+S ++ + +G P + L+LF Q+ P + T V+
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHT----FTPVLG 92
Query: 199 AVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVT 258
A S L E G VHA + + G TALI+MYS+ G + SV+VFE + +++V+
Sbjct: 93 ACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVS 152
Query: 259 WTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMR 318
W +L++G +G+ +EAL F M + ++ + C+ +++ G +V +M
Sbjct: 153 WNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQV-HAMV 211
Query: 319 SEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHND 374
G ++ M+ G++ EA K + + + V+ +L+ C+ + +
Sbjct: 212 VVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRN 266
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 132/283 (46%), Gaps = 20/283 (7%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G + + ALI+ Y G L +V +F+ + ++DL SW+ L+ F NG EAL +F
Sbjct: 114 GAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVF 173
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M ++ E T + SV+ +SL L+ G VHA + G L V LGTA+I+
Sbjct: 174 AAMYRERVEISEFT----LSSVVKTCASLKILQQGKQVHAMVVVTGRDLVV-LGTAMISF 228
Query: 235 YSRCGSIDRSVKVFEEMP-HRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
YS G I+ ++KV+ + H + V SLI+G R+R AF M RP+
Sbjct: 229 YSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCI---RNRNYKEAFLLMSRQ--RPNVRV 283
Query: 294 YTAALVACSHGGLVEDGW--RVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVE 351
+++L CS D W + + G + ++D+ G+ G +++A
Sbjct: 284 LSSSLAGCSDN---SDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFR 340
Query: 352 DMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDG 394
+P K + V W +++ A + D V KA E E+ G
Sbjct: 341 AIPSK-SVVSWTSMIDAYAVNGDGV---KALEIFREMCEEGSG 379
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 136/249 (54%), Gaps = 6/249 (2%)
Query: 118 SNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM 177
+++FV +L++ Y G ++ +FD M R+ +W+++I G+ EA+SLF+ M
Sbjct: 317 TDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIM 376
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
+ + + + ++S++ A S+GAL LG +HA I + + V +G+ L+ +Y +
Sbjct: 377 K----RRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCK 432
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
CG + V +++P R+VV+WT++I+G + G EAL ++M + G+ P+ Y++A
Sbjct: 433 CGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSA 492
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKP 357
L AC++ + G + + + + + ++ + + G + EAF+ + MP K
Sbjct: 493 LKACANSESLLIGRSIHSIAKKNHALSNVFVG-SALIHMYAKCGFVSEAFRVFDSMPEK- 550
Query: 358 NSVIWRTLL 366
N V W+ ++
Sbjct: 551 NLVSWKAMI 559
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 125/254 (49%), Gaps = 12/254 (4%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N+ V+++L+ Y G L A+ FD M ++D+ SW+ +I + G+ +A+ +F M
Sbjct: 217 NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGM- 275
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
L +P + + S++ A S AL G VH+ + + + V +GT+L++MY++C
Sbjct: 276 LNHWFLP---NEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKC 332
Query: 239 GSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAAL 298
G I KVF+ M +RN VTWTS+I A G EA+ FR M+ L + + L
Sbjct: 333 GEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSIL 392
Query: 299 VACSHGGLVEDGWRVFESMRS---EYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPI 355
AC G + G + + E VY +V L + G +AF ++ +P
Sbjct: 393 RACGSVGALLLGKELHAQIIKNSIEKNVYIG----STLVWLYCKCGESRDAFNVLQQLPS 448
Query: 356 KPNSVIWRTLLGAC 369
+ + V W ++ C
Sbjct: 449 R-DVVSWTAMISGC 461
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 98/184 (53%), Gaps = 6/184 (3%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQM- 177
N+++ + L+ Y G A ++ ++P RD+ SW+ +I ++ G+ +EAL ++M
Sbjct: 419 NVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMI 478
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
Q G P + S + A ++ +L +G +H+ ++ V +G+ALI+MY++
Sbjct: 479 QEGVEPNPFTYS-----SALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAK 533
Query: 238 CGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
CG + + +VF+ MP +N+V+W ++I G A +G REAL+ M G D +
Sbjct: 534 CGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATI 593
Query: 298 LVAC 301
L C
Sbjct: 594 LSTC 597
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 121/249 (48%), Gaps = 6/249 (2%)
Query: 120 IFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
I+ N LI++ G L A +FD MP+++ +W+ +I + G EA +LF+
Sbjct: 117 IYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVK 176
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
+ T+ M + +++ S ELG VH + + G+G + + ++L+ Y++CG
Sbjct: 177 HGIRF---TNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCG 232
Query: 240 SIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
+ +++ F+ M ++V++WT++I+ + G +A+ F M P+ + L
Sbjct: 233 ELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILK 292
Query: 300 ACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNS 359
ACS + G R S+ + + + ++D+ + G + + K + M + N+
Sbjct: 293 ACSEEKALRFG-RQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR-NT 350
Query: 360 VIWRTLLGA 368
V W +++ A
Sbjct: 351 VTWTSIIAA 359
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 13/179 (7%)
Query: 7 LHATLIKTGQHNNPL---SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRH 63
LHA +IK N +L + +C E S D A VL + P D + +I
Sbjct: 407 LHAQIIKNSIEKNVYIGSTLVWLYCKCGE--SRD----AFNVLQQLPSRDVVSWTAMISG 460
Query: 64 LA-LHSPTLATTLFSHMHRTGVTVDHFTF--PLIXXXXXXXXXXXXXXXXXXXXGFA-SN 119
+ L + A M + GV + FT+ L A SN
Sbjct: 461 CSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSN 520
Query: 120 IFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
+FV +ALI+ Y G ++ A +FD MP+++L SW +I+ + NG+ EAL L +M+
Sbjct: 521 VFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRME 579
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 4/159 (2%)
Query: 212 VHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGR 271
+HA + + G LI+ R G + + KVF+ MP +N VTWT++I G +G
Sbjct: 104 IHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGL 163
Query: 272 SREALRAFRDMREAGLR-PDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHY 330
EA F D + G+R + + L CS E G +V +M + GV ++
Sbjct: 164 EDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNM-VKVGVGNLIVE- 221
Query: 331 GCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGAC 369
+V + G L A + DM + + + W ++ AC
Sbjct: 222 SSLVYFYAQCGELTSALRAF-DMMEEKDVISWTAVISAC 259
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 74/104 (71%)
Query: 459 LVSVVDTIKLGGYAPNTSSVLHDIQEEEKEHSLGYHSEKLAVAFVLLYHRDRKAIRVIKN 518
L S+ ++ GY P T VLHDI EE KE +L +HSE+LA+AF ++ IRV+KN
Sbjct: 136 LKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKN 195
Query: 519 LRICYDCHSFMKHVSGIFDKDIIIRDRNRFHHFSKGSCSCGDFW 562
LRIC DCH+F+K +S I D++II+RD RFHHF G+CSCGD+W
Sbjct: 196 LRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 6/232 (2%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQ 175
F N+ + +L+ Y G + LFD + QR++ +W+ +I C+ N + +F+
Sbjct: 449 FLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFR 508
Query: 176 QMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA-LINM 234
M L + D V M V++ S L AL+LG +H +I + ++P +A +I M
Sbjct: 509 LMLLSKHR----PDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFE-SIPFVSARIIKM 563
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y +CG + + F+ + + +TWT++I + R+A+ F M G P+ +
Sbjct: 564 YGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTF 623
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
TA L CS G V++ +R F M Y + P EHY +++LL R G + EA
Sbjct: 624 TAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 110/200 (55%), Gaps = 4/200 (2%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLF 174
G +++F++ +L++ Y G + LA +FDE+ +RD+ W +I +N EAL LF
Sbjct: 244 GLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLF 303
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVP-LGTALIN 233
+ M + P S V++ +++ + + AL+LG VHA++ ++ + P + + LI+
Sbjct: 304 RTMISEEKIYPNS---VILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLID 360
Query: 234 MYSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
+Y +CG + +VF RN ++WT+L++G A +GR +ALR+ M++ G RPD
Sbjct: 361 LYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVT 420
Query: 294 YTAALVACSHGGLVEDGWRV 313
L C+ ++ G +
Sbjct: 421 IATVLPVCAELRAIKQGKEI 440
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 111/234 (47%), Gaps = 10/234 (4%)
Query: 71 LATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXX---XXXXGFASNIFVQNALI 127
+A T+ ++ + G+ V+ TF + G SN F++ L+
Sbjct: 94 VALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLV 153
Query: 128 NAYGSSGSLNLAVHLFDEMPQRDLASWSTLI--VCFTNNGYPAEALSLFQQMQLGDPQVP 185
+ Y + GS+ A +FDE ++ SW+ L+ + + LS F +M+ ++
Sbjct: 154 HMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMR----ELG 209
Query: 186 ESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSV 245
+ + +V + + AL G+ HA + GL +V L T+L++MY +CG + +
Sbjct: 210 VDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLAR 269
Query: 246 KVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDM-REAGLRPDGAAYTAAL 298
+VF+E+ R++V W ++I GLA + R EAL FR M E + P+ T L
Sbjct: 270 RVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTIL 323
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 110/249 (44%), Gaps = 8/249 (3%)
Query: 121 FVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLG 180
FV + LI+ Y G + +F QR+ SW+ L+ + NG +AL MQ
Sbjct: 353 FVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQ-- 410
Query: 181 DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGS 240
Q D V + +V+ + L A++ G +H Y + V L T+L+ MYS+CG
Sbjct: 411 --QEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGV 468
Query: 241 IDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVA 300
+ +++F+ + RNV WT++I + R + FR M + RPD L
Sbjct: 469 PEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTV 528
Query: 301 CSHGGLVEDGWRVF-ESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNS 359
CS ++ G + ++ E+ P + ++ + G+ G L A F D S
Sbjct: 529 CSDLKALKLGKELHGHILKKEFESIPFVSAR--IIKMYGKCGDLRSA-NFSFDAVAVKGS 585
Query: 360 VIWRTLLGA 368
+ W ++ A
Sbjct: 586 LTWTAIIEA 594
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 131/305 (42%), Gaps = 18/305 (5%)
Query: 52 PDPTPYNTVIRHLALHSPTLA--TTLFSHMHRTGVTVDHFTFPLIXXXXXXX---XXXXX 106
P+ YN VI F M R GV D TF +
Sbjct: 301 PNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARN 360
Query: 107 XXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFT 162
++F N L++A G ++LA + +MP + ++ S+ST+I F
Sbjct: 361 LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFA 420
Query: 163 NNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLG 222
G EAL+LF +M+ + + D V +++S + +G E + + + G+
Sbjct: 421 KAGRFDEALNLFGEMRY----LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 223 LTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRA 278
V AL+ Y + G D KVF EM N++T+++LI G + G +EA+
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 279 FRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLG 338
FR+ + AGLR D Y+A + A GLV + + M E G+ P + Y ++D G
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFG 595
Query: 339 RAGML 343
R+ +
Sbjct: 596 RSATM 600
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 15/192 (7%)
Query: 186 ESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSV 245
++ G + ++IS + G + + + G G TV +ALI+ Y R G + ++
Sbjct: 229 KNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAI 288
Query: 246 KVFEEMPHR----NVVTWTSLITGLAVHGRS-REALRAFRDMREAGLRPDGAAYTAALVA 300
VF M N+VT+ ++I G ++ + F +M+ G++PD + + L
Sbjct: 289 SVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAV 348
Query: 301 CSHGGLVEDGWRVFESM---RSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIK- 356
CS GGL E +F+ M R E V+ Y ++D + + G + AF+ + MP+K
Sbjct: 349 CSRGGLWEAARNLFDEMTNRRIEQDVF----SYNTLLDAICKGGQMDLAFEILAQMPVKR 404
Query: 357 --PNSVIWRTLL 366
PN V + T++
Sbjct: 405 IMPNVVSYSTVI 416
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 130/302 (43%), Gaps = 47/302 (15%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYP-AE 169
G+ + ++ +ALI+AYG SG A+ +F+ M + +L +++ +I G +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 170 ALSLFQQMQLGDPQVPESTDGVMMLSVIS------------------------------- 198
F +MQ Q P+ +L+V S
Sbjct: 323 VAKFFDEMQRNGVQ-PDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381
Query: 199 -AVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNV- 256
A+ G ++L + A + + V + +I+ +++ G D ++ +F EM + +
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 257 ---VTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRV 313
V++ +L++ GRS EAL R+M G++ D Y A L G ++ +V
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 314 FESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA---FKFVEDMPIKPNSVIWRTLLGA-C 369
F M+ E+ V P L Y ++D + G+ EA F+ + ++ + V++ L+ A C
Sbjct: 502 FTEMKREH-VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALC 560
Query: 370 VN 371
N
Sbjct: 561 KN 562
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 122/314 (38%), Gaps = 41/314 (13%)
Query: 42 AAAVLLRFPI----PDPTPYNTVIRHLALHSP-TLATTLFSHMHRTGVTVDHFTFPL--- 93
A +L + P+ P+ Y+TVI A A LF M G+ +D ++
Sbjct: 393 AFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS 452
Query: 94 IXXXXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR---- 149
I G ++ NAL+ YG G + +F EM +
Sbjct: 453 IYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLP 512
Query: 150 DLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELG 209
+L ++STLI ++ G EA+ +F++ + + D V+ ++I A+ G +
Sbjct: 513 NLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRA----DVVLYSALIDALCKNGLVGSA 568
Query: 210 IWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRS---------------VKVFEEMPHR 254
+ + + + G+ V ++I+ + R ++DRS + E
Sbjct: 569 VSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGN 628
Query: 255 NVVTWTSLITGLAVHGRSREA----------LRAFRDMREAGLRPDGAAYTAALVACSHG 304
V+ +T + + +++ L FR M + ++P+ ++A L ACS
Sbjct: 629 RVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRC 688
Query: 305 GLVEDGWRVFESMR 318
ED + E +R
Sbjct: 689 NSFEDASMLLEELR 702
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 9/160 (5%)
Query: 227 LGTALINMYSRCGSIDRSVKVFEEM----PHRNVVTWTSLITGLAVHGRSREALRAFRDM 282
L +A+I+ R G + + ++FE V +++LI+ G EA+ F M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 283 REAGLRPDGAAYTAALVACSHGGL-VEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAG 341
+E GLRP+ Y A + AC GG+ + + F+ M+ GV P + ++ + R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN-GVQPDRITFNSLLAVCSRGG 353
Query: 342 MLLEAFKFVEDMP---IKPNSVIWRTLLGACVNHNDLVLA 378
+ A ++M I+ + + TLL A + LA
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 147/338 (43%), Gaps = 22/338 (6%)
Query: 53 DPTPYNTVIRHLALHSPTL-ATTLFSHMHRTGVTVDHFTFPLIXXXXXXX---XXXXXXX 108
D Y+TVI L + A LF+ M G+ D FT+ +
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 109 XXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNN 164
N+ N+LI+A+ G L A LFDEM QR ++ ++++LI F +
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 165 GYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLT 224
EA +F M D T ++ A + +EL RR +G T
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL---FRDMSRRGLVGNT 415
Query: 225 VPLGTALINMYSRCGSIDRSVKVFEEMP----HRNVVTWTSLITGLAVHGRSREALRAFR 280
V T LI+ + + D + VF++M H N++T+ +L+ GL +G+ +A+ F
Sbjct: 416 VTY-TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFE 474
Query: 281 DMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRA 340
++++ + PD Y G VEDGW +F S+ S GV P + Y M+ +
Sbjct: 475 YLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL-SLKGVKPDVIAYNTMISGFCKK 533
Query: 341 GMLLEAF----KFVEDMPIKPNSVIWRTLLGACVNHND 374
G+ EA+ K ED P+ P+S + TL+ A + D
Sbjct: 534 GLKEEAYTLFIKMKEDGPL-PDSGTYNTLIRAHLRDGD 570
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 136/294 (46%), Gaps = 33/294 (11%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMP----QRDLASWSTLIVCFTNNGYPAEA 170
G+ +I N+L+N + ++ AV L D+M Q D +++TL+ + +EA
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
++L ++M + Q T G +VI+ + G +L + + + + + V + +
Sbjct: 190 VALVERMVVKGCQPDLVTYG----AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245
Query: 231 LINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAG 286
+I+ + +D ++ +F EM ++ +V T++SLI+ L +GR +A R DM E
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYG------CMVDLLGRA 340
+ P+ + + + A + G + + ++F+ M + + P + Y CM D L A
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEM-IQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 341 GMLLEAFKFVEDMPIKPNSVIWRTLL-GACVNHNDLVLAEKAKERVNELDPHHD 393
+ F + P+ V + TL+ G C KAK+ V+ ++ D
Sbjct: 365 Q---QIFTLMVSKDCLPDVVTYNTLINGFC----------KAKKVVDGMELFRD 405
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 121/277 (43%), Gaps = 16/277 (5%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEA 170
G + N++ N +IN L+ A+ + +M + + + ++L+ F + +EA
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
++L QM ++ D V +++ + + + + G + A
Sbjct: 155 VALVDQM----VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 231 LINMYSRCGSIDRSVKVFEEMP----HRNVVTWTSLITGLAVHGRSREALRAFRDMREAG 286
+IN + G D ++ + +M +VV ++++I L + +AL F +M G
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
+RPD Y++ + + G D R+ M E + P + + ++D + G L+EA
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDML-ERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 347 FKFVEDM---PIKPNSVIWRTLLGACVNHNDLVLAEK 380
K ++M I PN V + +L+ H+ L A++
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 148/358 (41%), Gaps = 25/358 (6%)
Query: 37 DTASYAAAVLLRFPI----PDPTPYNTVIRHLALH-SPTLATTLFSHMHRTGVTVDHFTF 91
+ AS A A++ R + PD Y VI L P LA L + M + + D +
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 253
Query: 92 PLIXXXXXXXX---XXXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQ 148
I G ++F N LI+ + G + A L +M +
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 149 R----DLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLG 204
+ DL ++ LI F G EA L+ +M P D V ++I
Sbjct: 314 KNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP---DVVAYNTLIKGFCKYK 370
Query: 205 ALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMP----HRNVVTWT 260
+E G+ V + + GL T LI+ + + D + VF++M H +++T+
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 261 SLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSE 320
L+ GL +G AL F M++ ++ D YT + A G VEDGW +F S+ S
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL-SL 489
Query: 321 YGVYPMLEHYGCMVDLLGRAGMLLEA----FKFVEDMPIKPNSVIWRTLLGACVNHND 374
GV P + Y M+ R G+ EA + ED P+ PNS + TL+ A + D
Sbjct: 490 KGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL-PNSGTYNTLIRARLRDGD 546
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/332 (19%), Positives = 142/332 (42%), Gaps = 19/332 (5%)
Query: 50 PIPDPTPYNTVIRHLA-LHSPTLATTLFSHMHRTGVTVDHFTFPLIXX---XXXXXXXXX 105
P P ++ ++ +A ++ L +L M G++ + +T+ +
Sbjct: 71 PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLAL 130
Query: 106 XXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMP----QRDLASWSTLIVCF 161
G+ +I N+L+N + ++ AV L D+M Q D +++TL+
Sbjct: 131 AILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL 190
Query: 162 TNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGL 221
+ +EA++L ++M + Q T G +VI+ + G +L + + + + +
Sbjct: 191 FQHNKASEAVALVERMVVKGCQPDLVTYG----AVINGLCKRGEPDLALNLLNKMEKGKI 246
Query: 222 GLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALR 277
V + +I+ + +D + +F +M + +V T+ LI+ L +GR +A R
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 278 AFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLL 337
DM E + PD + A + A G + + ++++ M +P + Y ++
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Query: 338 GRAGML---LEAFKFVEDMPIKPNSVIWRTLL 366
+ + +E F+ + + N+V + TL+
Sbjct: 367 CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLI 398
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 120/311 (38%), Gaps = 44/311 (14%)
Query: 53 DPTPYNTVIRHLALHS-PTLATTLFSHMHRTGVTVDHFTF-PLIXXXXXXX--XXXXXXX 108
D YNT+I L + A LF+ M G+ D FT+ PLI
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 109 XXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR-----DLASWSTLIVCFTN 163
++ NALI+A+ G L A L+DEM + D+ +++TLI F
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 164 NGYPAEALSLFQQMQL---------------GDPQVPESTDGVMMLS------------- 195
E + +F++M G Q + + M+
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428
Query: 196 ---VISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMP 252
++ + + G +E + V Y+++ + L + T +I + G ++ +F +
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS 488
Query: 253 HR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVE 308
+ NVVT+T++++G G EA F +M+E G P+ Y + A G
Sbjct: 489 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEA 548
Query: 309 DGWRVFESMRS 319
+ + MRS
Sbjct: 549 ASAELIKEMRS 559
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 152/354 (42%), Gaps = 29/354 (8%)
Query: 53 DPTPYNTVIRHLALHS-PTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXX---XXXXXXX 108
D YNT+I L + A LF+ M G+ D FT+ +
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 109 XXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNN 164
N+ +ALI+A+ G L A L+DEM +R D+ ++S+LI F +
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 165 GYPAEALSLFQQMQLGD--PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLG 222
EA +F+ M D P V V ++I +E G+ + + + GL
Sbjct: 377 DRLDEAKHMFELMISKDCFPNV------VTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 223 LTVPLGTALINMYSRCGSIDRSVKVFEEMP----HRNVVTWTSLITGLAVHGRSREALRA 278
T LI+ + + D + VF++M H N++T+ L+ GL +G+ +A+
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 279 FRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLG 338
F ++ + + PD Y + G VEDGW +F ++ S GV P + Y M+
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL-SLKGVSPNVIAYNTMISGFC 549
Query: 339 RAGMLLEA----FKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNEL 388
R G EA K ED P+ PNS + TL+ A + D E + E + E+
Sbjct: 550 RKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRARLRDGD---REASAELIKEM 599
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 150/338 (44%), Gaps = 25/338 (7%)
Query: 50 PIPDPTPYNTVIRHLA-LHSPTLATTLFSHMHRTGVTVDHFTFPLIXX---XXXXXXXXX 105
P P +N ++ +A ++ L +L M G++ D +T+ +
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLAL 138
Query: 106 XXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCF 161
G+ +I ++L+N Y S ++ AV L D+M + D +++TLI
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 162 TNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGL 221
+ +EA++L QM Q D V +V++ + G ++L + + + + +
Sbjct: 199 FLHNKASEAVALVDQM----VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 254
Query: 222 GLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALR 277
V + +I+ + +D ++ +F EM ++ +V T++SLI+ L +GR +A R
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 278 AFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESM--RS---EYGVYPMLEHYGC 332
DM E + P+ ++A + A G + + ++++ M RS + Y L + C
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 333 MVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL-GAC 369
M D L A + F+ + PN V + TL+ G C
Sbjct: 375 MHDRLDEAKHM---FELMISKDCFPNVVTYSTLIKGFC 409
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 116/282 (41%), Gaps = 22/282 (7%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMP----QRDLASWSTLIVCFTNNGYPAEALS-LFQQMQ 178
N L++A L + L ++M DL ++S I CF + AL+ L + M+
Sbjct: 87 NKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMK 146
Query: 179 LG-DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
LG +P + V + S+++ + + + + G T LI+
Sbjct: 147 LGYEPDI------VTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 238 CGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
+V + ++M R ++VT+ +++ GL G AL + M + + D
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
Y + ++D +F M ++ G+ P + Y ++ L G +A + + DM
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 354 ---PIKPNSVIWRTLLGACVNHNDLVLAEKAKERV--NELDP 390
I PN V + L+ A V LV AEK + + +DP
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 132/270 (48%), Gaps = 22/270 (8%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEALSLF 174
N+ +ALI+A+ G L A L+DEM +R D+ ++S+LI F + EA +F
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 175 QQMQLGD--PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGL-GLTVPLGTAL 231
+ M D P V V ++I +E G+ + + + GL G TV T +
Sbjct: 384 ELMISKDCFPNV------VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 232 INMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGL 287
++ + G D + K+F++M +++T++ L+ GL +G+ +AL F ++++ +
Sbjct: 438 QGLF-QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 288 RPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA- 346
PD Y + G VEDGW +F S+ S GV P + Y M+ R G+ EA
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 347 --FKFVEDMPIKPNSVIWRTLLGACVNHND 374
F+ +++ PNS + TL+ A + D
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 150/338 (44%), Gaps = 25/338 (7%)
Query: 50 PIPDPTPYNTVIRHLA-LHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXX---XX 105
P+P +N ++ +A ++ L +L M ++ D +++ ++
Sbjct: 76 PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLAL 135
Query: 106 XXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEM----PQRDLASWSTLIVCF 161
G+ +I ++L+N Y ++ AV L D+M Q + +++TLI
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 195
Query: 162 TNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGL 221
+ +EA++L +M Q T G +V++ + G ++L + + + + +
Sbjct: 196 FLHNKASEAVALIDRMVARGCQPDLFTYG----TVVNGLCKRGDIDLALSLLKKMEKGKI 251
Query: 222 GLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALR 277
V + T +I+ +++ ++ +F EM ++ NVVT+ SLI L +GR +A R
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 278 AFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESM--RS---EYGVYPMLEHYGC 332
DM E + P+ ++A + A G + + ++++ M RS + Y L + C
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 333 MVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL-GAC 369
M D L A + F+ + PN V + TL+ G C
Sbjct: 372 MHDRLDEAKHM---FELMISKDCFPNVVTYNTLIKGFC 406
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 122/311 (39%), Gaps = 43/311 (13%)
Query: 52 PDPTPYNTVIRHLALHSP-TLATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXX- 109
P+ YN++IR L + + A+ L S M + + TF +
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 110 --XXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRD----LASWSTLIVCFTN 163
+IF ++LIN + L+ A H+F+ M +D + +++TLI F
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 164 NGYPAEALSLFQQM--------------------QLGDPQVPES------TDGV----MM 193
E + LF++M Q GD + + +DGV +
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 194 LSVI-SAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMP 252
S++ + G LE + V Y++++ + + +I + G ++ +F +
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527
Query: 253 HR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVE 308
+ NV+ +T++I+G G EA FR+M+E G P+ Y + A G
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 587
Query: 309 DGWRVFESMRS 319
+ + MRS
Sbjct: 588 ASAELIKEMRS 598
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 34/288 (11%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQ----RDLASWSTLIVCFTNNGYPAEALSLF-QQMQ 178
N L++A +L + L + M DL S++ LI CF AL++ + M+
Sbjct: 84 NKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK 143
Query: 179 LG-DPQVPESTDGVMMLSVISA------VSSLGALELGIWVHAYIRRAGLGLTVPLGTAL 231
LG +P + V + S+++ +S AL ++V Y T+ G L
Sbjct: 144 LGYEPDI------VTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 232 INMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGL 287
N S +V + + M R ++ T+ +++ GL G AL + M + +
Sbjct: 198 HNKASE------AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 251
Query: 288 RPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAF 347
D YT + A + V D +F M ++ G+ P + Y ++ L G +A
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 348 KFVEDM---PIKPNSVIWRTLLGACVNHNDLVLAEKAKERV--NELDP 390
+ + DM I PN V + L+ A V LV AEK + + +DP
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 23/274 (8%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
N LINA GSSG+ A+ + +M DL + + ++ + + ++ALS F+ M+
Sbjct: 85 NNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMK- 143
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
G P++T +++ +S + + L ++ +RA V T+++++YS G
Sbjct: 144 GAKVRPDTTTFNIIIYCLSKLGQ-SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG 202
Query: 240 SIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
I+ VFE M N+V++ +L+ AVHG S AL D+++ G+ PD +YT
Sbjct: 203 EIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYT 262
Query: 296 AALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA---FKFVED 352
L + VF MR E P + Y ++D G G L EA F+ +E
Sbjct: 263 CLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 321
Query: 353 MPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVN 386
IKPN V TLL AC ++K++VN
Sbjct: 322 DGIKPNVVSVCTLLAAC---------SRSKKKVN 346
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 105/257 (40%), Gaps = 43/257 (16%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N+ NALI+AYGS+G L AV +F +M Q +G +S+ +
Sbjct: 292 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQ---------------DGIKPNVVSVCTLL- 335
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
S V + +V+SA S G+ L + I Y
Sbjct: 336 ---AACSRSKKKVNVDTVLSAAQS----------------RGINLNTAAYNSAIGSYINA 376
Query: 239 GSIDRSVKVFEEMPHRNV----VTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
+++++ +++ M + V VT+T LI+G + EA+ ++M + + Y
Sbjct: 377 AELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVY 436
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMV---DLLGRAGMLLEAFKFVE 351
++ L A S G V + +F M+ G P + Y M+ + + G E F +E
Sbjct: 437 SSVLCAYSKQGQVTEAESIFNQMKMA-GCEPDVIAYTSMLHAYNASEKWGKACELFLEME 495
Query: 352 DMPIKPNSVIWRTLLGA 368
I+P+S+ L+ A
Sbjct: 496 ANGIEPDSIACSALMRA 512
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 131/274 (47%), Gaps = 23/274 (8%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
N LINA GSSG+ A+ + +M DL + + ++ + + ++ALS F+ M+
Sbjct: 217 NNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMK- 275
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
G P++T +++ +S + + L ++ +RA V T+++++YS G
Sbjct: 276 GAKVRPDTTTFNIIIYCLSKLGQ-SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG 334
Query: 240 SIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
I+ VFE M N+V++ +L+ AVHG S AL D+++ G+ PD +YT
Sbjct: 335 EIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYT 394
Query: 296 AALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA---FKFVED 352
L + VF MR E P + Y ++D G G L EA F+ +E
Sbjct: 395 CLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 353 MPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVN 386
IKPN V TLL AC ++K++VN
Sbjct: 454 DGIKPNVVSVCTLLAAC---------SRSKKKVN 478
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 105/257 (40%), Gaps = 43/257 (16%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQ 178
N+ NALI+AYGS+G L AV +F +M Q +G +S+ +
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQ---------------DGIKPNVVSVCTLL- 467
Query: 179 LGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
S V + +V+SA S G+ L + I Y
Sbjct: 468 ---AACSRSKKKVNVDTVLSAAQS----------------RGINLNTAAYNSAIGSYINA 508
Query: 239 GSIDRSVKVFEEMPHRNV----VTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
+++++ +++ M + V VT+T LI+G + EA+ ++M + + Y
Sbjct: 509 AELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVY 568
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMV---DLLGRAGMLLEAFKFVE 351
++ L A S G V + +F M+ G P + Y M+ + + G E F +E
Sbjct: 569 SSVLCAYSKQGQVTEAESIFNQMKMA-GCEPDVIAYTSMLHAYNASEKWGKACELFLEME 627
Query: 352 DMPIKPNSVIWRTLLGA 368
I+P+S+ L+ A
Sbjct: 628 ANGIEPDSIACSALMRA 644
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 152/392 (38%), Gaps = 47/392 (11%)
Query: 52 PDPTPYNTVIRHLALHSPT-LATTLFSHMHRTGVTVDHFTFPLIXXXXX---XXXXXXXX 107
PD YN+++ + T LA L M V D FT+ I
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 108 XXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLA----SWSTLIVCFTN 163
G S++ N+L+ +G N L +M R++ +++ L+ F
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 164 NGYPAEALSLFQQM-----------------------------QLGDPQVPE--STDGVM 192
G EA L+++M + D V S D V
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 193 MLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMP 252
S+I + ++ G+ V I + GL + L+ + + G I + ++F+EM
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 253 HR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVE 308
+V+T+ L+ GL +G+ +AL F D++++ + YT + GG VE
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490
Query: 309 DGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA---FKFVEDMPIKPNSVIWRTL 365
D W +F S+ + GV P + Y M+ L + G L EA + +E+ PN + TL
Sbjct: 491 DAWNLFCSLPCK-GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Query: 366 LGACVNHNDLVLAEKAKERVNELDPHHDGDYV 397
+ A + DL + K E + D +
Sbjct: 550 IRAHLRDGDLTASAKLIEEMKSCGFSADASSI 581
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 115/268 (42%), Gaps = 17/268 (6%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEA 170
G A NI+ N +IN + A + ++ + D +++TLI G +EA
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
+ L +M Q D V S+++ + G L + + + + V +
Sbjct: 178 VVLVDRMVENGCQ----PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233
Query: 231 LINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAG 286
+I+ R G ID ++ +F+EM + +VVT+ SL+ GL G+ + +DM
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
+ P+ + L G +++ +++ M + G+ P + Y ++D L EA
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITR-GISPNIITYNTLMDGYCMQNRLSEA 352
Query: 347 FKFVEDM---PIKPNSVIWRTLL-GACV 370
++ M P+ V + +L+ G C+
Sbjct: 353 NNMLDLMVRNKCSPDIVTFTSLIKGYCM 380
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 148/350 (42%), Gaps = 44/350 (12%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEALSLF 174
N+F N LI + +G++++A+ LFD+M + ++ +++TLI + + L
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 175 QQMQLG--DPQVPE-----------------------------STDGVMMLSVISAVSSL 203
+ M L +P + S D V ++I
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 204 GALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTW 259
G + +HA + R GL +V T+LI+ + G+++R+++ ++M R N T+
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 260 TSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRS 319
T+L+ G + G EA R R+M + G P Y A + G +ED V E M+
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK- 442
Query: 320 EYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM---PIKPNSVIWRTLL-GACVNHNDL 375
E G+ P + Y ++ R+ + EA + +M IKP+++ + +L+ G C
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 376 VLAEKAKERVNELDPHHDGDYVLLSNAYXXXXXXXXXXXVRNSMRENRIV 425
+ +E + P + Y L NAY + N M E ++
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 138/352 (39%), Gaps = 23/352 (6%)
Query: 52 PDPTPYNTVIRHLALHSPT-LATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXX---XX 107
P+ YN +IR +A TLF M G + T+ +
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 108 XXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTN 163
G N+ N +IN G + + EM +R D +++TLI +
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 164 NGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGL 223
G +AL + +M L P + S+I ++ G + + +R GL
Sbjct: 323 EGNFHQALVMHAEM-LRHGLTPSV---ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 224 TVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAF 279
T L++ +S+ G ++ + +V EM +VVT+ +LI G V G+ +A+
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 280 RDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGR 339
DM+E GL PD +Y+ L V++ RV M E G+ P Y ++
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM-VEKGIKPDTITYSSLIQGFCE 497
Query: 340 AGMLLEAFKFVEDM---PIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNEL 388
EA E+M + P+ + L+ A DL EKA + NE+
Sbjct: 498 QRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL---EKALQLHNEM 546
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 135/303 (44%), Gaps = 45/303 (14%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEA 170
GF+ ++ NALIN + +G + A+ + ++M ++ D+ S+ST++ F + EA
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
L + ++M + D + S+I + ++ + R GL TA
Sbjct: 470 LRVKREM----VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTA 525
Query: 231 LINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAG 286
LIN Y G +++++++ EM + +VVT++ LI GL R+REA R +
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 287 LRPDGAAYTAALVACSH---------------GGLVEDGWRVFESM-----RSEYGVYPM 326
P Y + CS+ G++ + +VFESM + + Y +
Sbjct: 586 SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNI 645
Query: 327 LEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVN 386
+ H C RAG + +A+ ++M +K ++ + A LV A + +VN
Sbjct: 646 MIHGHC------RAGDIRKAYTLYKEM-VKSGFLLHTVTVIA------LVKALHKEGKVN 692
Query: 387 ELD 389
EL+
Sbjct: 693 ELN 695
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 114/264 (43%), Gaps = 15/264 (5%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEA 170
GF+ +++ +LI+A+ +SG AV++F +M + L +++ ++ F G P
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
++ + D P D ++I+ + V ++ AG A
Sbjct: 263 ITSLVEKMKSDGIAP---DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 231 LINMYSRCGSIDRSVKVFEEMP----HRNVVTWTSLITGLAVHGRSREALRAFRDMREAG 286
L+++Y + ++KV EM ++VT+ SLI+ A G EA+ M E G
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
+PD YT L G VE +FE MR+ G P + + + + G G E
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 347 FKFVEDMPI---KPNSVIWRTLLG 367
K +++ + P+ V W TLL
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLA 462
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 150/358 (41%), Gaps = 34/358 (9%)
Query: 52 PDPTPYNTVI---RHLALHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXX---XXXX 105
PD YNT+I + +LH A +F M G + D T+ +
Sbjct: 277 PDAYTYNTLITCCKRGSLHQE--AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAM 334
Query: 106 XXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCF 161
GF+ +I N+LI+AY G L+ A+ L ++M ++ D+ +++TL+ F
Sbjct: 335 KVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 162 TNNGYPAEALSLFQQMQLG--DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRA 219
G A+S+F++M+ P + + I + G + + I
Sbjct: 395 ERAGKVESAMSIFEEMRNAGCKPNI------CTFNAFIKMYGNRGKFTEMMKIFDEINVC 448
Query: 220 GLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVV----TWTSLITGLAVHGRSREA 275
GL + L+ ++ + G VF+EM V T+ +LI+ + G +A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 276 LRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMR------SEYGVYPMLEH 329
+ +R M +AG+ PD + Y L A + GG+ E +V M +E +L
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 330 YGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNE 387
Y ++ G++ + V I+P +V+ +TL+ C + L AE+A + E
Sbjct: 569 YANGKEI----GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE 622
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 129/316 (40%), Gaps = 19/316 (6%)
Query: 51 IPDPTPYNTVIRHLA-LHSPTLATTLFSHMHRTGVTVDHFTFPLIXXXXXXX---XXXXX 106
+P+ +NT+I + S A T++ M GVT D T+ +
Sbjct: 486 VPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEK 545
Query: 107 XXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDE-----MPQRDLASWSTLIVCF 161
N +L++AY + + L L +E + R + + ++VC
Sbjct: 546 VLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCS 605
Query: 162 TNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGL 221
+ P EA F +++ + S D + S++S + V Y++ G
Sbjct: 606 KCDLLP-EAERAFSELK----ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGF 660
Query: 222 GLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALR 277
++ +L+ M+SR +S ++ E+ + +++++ ++I + R R+A R
Sbjct: 661 TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASR 720
Query: 278 AFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLL 337
F +MR +G+ PD Y + + + + E+ V M ++G P Y +VD
Sbjct: 721 IFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM-IKHGCRPNQNTYNSIVDGY 779
Query: 338 GRAGMLLEAFKFVEDM 353
+ EA FVED+
Sbjct: 780 CKLNRKDEAKLFVEDL 795
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 128/266 (48%), Gaps = 22/266 (8%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMP----QRDLASWSTLIVCFTNNGYPAEA 170
GF + ++ G + L DEM + + +++ LI + Y EA
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
+++F QMQ + D V ++I + G L++ + ++ ++ AGL +
Sbjct: 414 MNVFNQMQ----EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSV 469
Query: 231 LINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSRE---ALRAFRDMR 283
+IN + G + + ++F EM + N+VT+ +I A+H ++R AL+ +RDM+
Sbjct: 470 IINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI---ALHAKARNYETALKLYRDMQ 526
Query: 284 EAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGML 343
AG +PD Y+ + H G +E+ VF M+ + V P YG +VDL G+AG +
Sbjct: 527 NAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEPVYGLLVDLWGKAGNV 585
Query: 344 LEAFKFVEDM---PIKPNSVIWRTLL 366
+A+++ + M ++PN +LL
Sbjct: 586 DKAWQWYQAMLQAGLRPNVPTCNSLL 611
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 108/275 (39%), Gaps = 23/275 (8%)
Query: 46 LLRFPIPDPTPYNTVIRHLALHSPTLATTL------FSHMHRTGVTVDHFTFPL---IXX 96
LL + D NTV + +HS A L F+ M G D T+ I
Sbjct: 381 LLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHA 440
Query: 97 XXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLA 152
G + + F + +IN G +G L A LF EM + +L
Sbjct: 441 KAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLV 500
Query: 153 SWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWV 212
+++ +I AL L++ MQ Q D V V+ + G LE V
Sbjct: 501 TFNIMIALHAKARNYETALKLYRDMQNAGFQ----PDKVTYSIVMEVLGHCGFLEEAEGV 556
Query: 213 HAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLI-TGLA 267
A ++R P+ L++++ + G++D++ + ++ M NV T SL+ T L
Sbjct: 557 FAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLR 616
Query: 268 VHGRSREALRAFRDMREAGLRPDGAAYTAALVACS 302
VH R EA + M GL P YT L C+
Sbjct: 617 VH-RMSEAYNLLQSMLALGLHPSLQTYTLLLSCCT 650
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 127/261 (48%), Gaps = 20/261 (7%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLAS----WSTLIVCFTNNGYPAEALSLF 174
++F +ALINA ++ A LFDEM +R L ++TLI + NG +
Sbjct: 309 DVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
Q+M Q D V+ ++++ G L + + R GL T LI+
Sbjct: 369 QKMLSKGLQ----PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDG 424
Query: 235 YSRCGSIDRSVKVFEEMPHRNV----VTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
+ R G ++ ++++ +EM + V +++L+ G+ GR +A RA R+M AG++PD
Sbjct: 425 FCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPD 484
Query: 291 GAAYTAALVACSHGGLVEDGWRVFESMRSEYGV-----YPMLEHYGCMVDLLGRAGMLLE 345
YT + A G + G+++ + M+S+ V Y +L + C + + A MLL+
Sbjct: 485 DVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLD 544
Query: 346 AFKFVEDMPIKPNSVIWRTLL 366
A + ++ + P+ + + TLL
Sbjct: 545 A---MLNIGVVPDDITYNTLL 562
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 123/271 (45%), Gaps = 16/271 (5%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDL----ASWSTLIVCFTNNGYPAEA 170
GF N++V N L+N + G+++ A +FDE+ +R L S++TLI + G E
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
L QM+ + D ++I+A+ ++ + + + GL + T
Sbjct: 295 FRLKHQME----KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 231 LINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAG 286
LI+ +SR G ID + +++M + ++V + +L+ G +G A M G
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
LRPD YT + GG VE + + M + G+ + +V + + G +++A
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEM-DQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 347 FKFVEDM---PIKPNSVIWRTLLGACVNHND 374
+ + +M IKP+ V + ++ A D
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGD 500
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 108/230 (46%), Gaps = 14/230 (6%)
Query: 157 LIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIW-VHAY 215
L++ +T+ G+ +A+ F+ + VP G +L + ++ G IW +
Sbjct: 176 LMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCG-NLLDRMMKLNPTGT----IWGFYME 230
Query: 216 IRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHRN----VVTWTSLITGLAVHGR 271
I AG L V + L+N + + G+I + KVF+E+ R+ VV++ +LI G G
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 272 SREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYG 331
E R M ++ RPD Y+A + A ++ +F+ M + G+ P +
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEM-CKRGLIPNDVIFT 349
Query: 332 CMVDLLGRAG---MLLEAFKFVEDMPIKPNSVIWRTLLGACVNHNDLVLA 378
++ R G ++ E+++ + ++P+ V++ TL+ + DLV A
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAA 399
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 130/281 (46%), Gaps = 19/281 (6%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDL----ASWSTLIVCFTNNGYPAEALSLF 174
++F +ALI+A+ G L A L+DEM +R + ++S+LI F + EA +F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
+ M + P D V ++I +E G+ V + + GL LI
Sbjct: 385 EFM-VSKHCFP---DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 235 YSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
+ G D + ++F+EM N++T+ +L+ GL +G+ +A+ F ++ + + P
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 291 GAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA---F 347
Y + G VEDGW +F ++ S GV P + Y M+ R G EA F
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 348 KFVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNEL 388
K +++ PNS + TL+ A + D E + E + E+
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGD---REASAELIKEM 597
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 157/358 (43%), Gaps = 27/358 (7%)
Query: 31 AELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLA-LHSPTLATTLFSHMHRTGVTVDHF 89
+EL D + ++ P P ++ ++ +A ++ + +L M G+ +H+
Sbjct: 58 SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 117
Query: 90 TFPLIXXXXXXXXX---XXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEM 146
T+ ++ G+ NI ++L+N Y S ++ AV L D+M
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 147 ----PQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSS 202
Q + +++TLI + +EA++L +M Q T GV V++ +
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV----VVNGLCK 233
Query: 203 LGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVT 258
G +L + + + L V + +I+ + +D ++ +F+EM + NVVT
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 259 WTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMR 318
++SLI+ L +GR +A R DM E + PD ++A + A G + + ++++ M
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM- 352
Query: 319 SEYGVYPMLEHYG------CMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL-GAC 369
+ + P + Y CM D L A + F+F+ P+ V + TL+ G C
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQM---FEFMVSKHCFPDVVTYNTLIKGFC 407
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 129/278 (46%), Gaps = 22/278 (7%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEM----PQRDLASWSTLIVCFTNNGYPAEA 170
GF + ++ G + L DEM Q + +++ LI + Y EA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
+++F QMQ + D V ++I + G L++ + ++ ++ GL +
Sbjct: 419 MNVFNQMQ----EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 231 LINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSRE---ALRAFRDMR 283
+IN + G + + K+F EM + N+VT+ ++ +H ++R AL+ +RDM+
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD---LHAKARNYQNALKLYRDMQ 531
Query: 284 EAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGML 343
AG PD Y+ + H G +E+ VF M+ + + P YG +VDL G+AG +
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNV 590
Query: 344 LEAFKFVEDM---PIKPNSVIWRTLLGACVNHNDLVLA 378
+A+++ + M ++PN +LL + N + A
Sbjct: 591 EKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 107/276 (38%), Gaps = 21/276 (7%)
Query: 46 LLRFPIPDPTPYNTVIRHLALHSPTLATTL------FSHMHRTGVTVDHFTFPL---IXX 96
LL + D NTV + +HS A L F+ M G D T+ I
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 97 XXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLA 152
G + + F + +IN G +G L A LF EM + +L
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 153 SWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWV 212
+++ ++ AL L++ MQ D V V+ + G LE V
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQ----NAGFEPDKVTYSIVMEVLGHCGYLEEAEAV 561
Query: 213 HAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAV 268
+++ P+ L++++ + G+++++ + ++ M H NV T SL++
Sbjct: 562 FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Query: 269 HGRSREALRAFRDMREAGLRPDGAAYTAALVACSHG 304
+ EA ++M GLRP YT L C+ G
Sbjct: 622 VNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 129/278 (46%), Gaps = 22/278 (7%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEM----PQRDLASWSTLIVCFTNNGYPAEA 170
GF + ++ G + L DEM Q + +++ LI + Y EA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
+++F QMQ + D V ++I + G L++ + ++ ++ GL +
Sbjct: 419 MNVFNQMQ----EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 231 LINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSRE---ALRAFRDMR 283
+IN + G + + K+F EM + N+VT+ ++ +H ++R AL+ +RDM+
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD---LHAKARNYQNALKLYRDMQ 531
Query: 284 EAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGML 343
AG PD Y+ + H G +E+ VF M+ + + P YG +VDL G+AG +
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNV 590
Query: 344 LEAFKFVEDM---PIKPNSVIWRTLLGACVNHNDLVLA 378
+A+++ + M ++PN +LL + N + A
Sbjct: 591 EKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 107/276 (38%), Gaps = 21/276 (7%)
Query: 46 LLRFPIPDPTPYNTVIRHLALHSPTLATTL------FSHMHRTGVTVDHFTFPL---IXX 96
LL + D NTV + +HS A L F+ M G D T+ I
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 97 XXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLA 152
G + + F + +IN G +G L A LF EM + +L
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 153 SWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWV 212
+++ ++ AL L++ MQ D V V+ + G LE V
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQ----NAGFEPDKVTYSIVMEVLGHCGYLEEAEAV 561
Query: 213 HAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAV 268
+++ P+ L++++ + G+++++ + ++ M H NV T SL++
Sbjct: 562 FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Query: 269 HGRSREALRAFRDMREAGLRPDGAAYTAALVACSHG 304
+ EA ++M GLRP YT L C+ G
Sbjct: 622 VNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 129/278 (46%), Gaps = 22/278 (7%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEM----PQRDLASWSTLIVCFTNNGYPAEA 170
GF + ++ G + L DEM Q + +++ LI + Y EA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
+++F QMQ + D V ++I + G L++ + ++ ++ GL +
Sbjct: 419 MNVFNQMQ----EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 231 LINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSRE---ALRAFRDMR 283
+IN + G + + K+F EM + N+VT+ ++ +H ++R AL+ +RDM+
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD---LHAKARNYQNALKLYRDMQ 531
Query: 284 EAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGML 343
AG PD Y+ + H G +E+ VF M+ + + P YG +VDL G+AG +
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNV 590
Query: 344 LEAFKFVEDM---PIKPNSVIWRTLLGACVNHNDLVLA 378
+A+++ + M ++PN +LL + N + A
Sbjct: 591 EKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 107/276 (38%), Gaps = 21/276 (7%)
Query: 46 LLRFPIPDPTPYNTVIRHLALHSPTLATTL------FSHMHRTGVTVDHFTFPL---IXX 96
LL + D NTV + +HS A L F+ M G D T+ I
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 97 XXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLA 152
G + + F + +IN G +G L A LF EM + +L
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 153 SWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWV 212
+++ ++ AL L++ MQ D V V+ + G LE V
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQ----NAGFEPDKVTYSIVMEVLGHCGYLEEAEAV 561
Query: 213 HAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAV 268
+++ P+ L++++ + G+++++ + ++ M H NV T SL++
Sbjct: 562 FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLR 621
Query: 269 HGRSREALRAFRDMREAGLRPDGAAYTAALVACSHG 304
+ EA ++M GLRP YT L C+ G
Sbjct: 622 VNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDG 657
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 121/255 (47%), Gaps = 22/255 (8%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEALSLF 174
N+ NALI+A+ G L A L+DEM +R D+ ++S+LI F + EA +F
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 175 QQMQLGD--PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALI 232
+ M D P V V ++I+ ++ G+ + + + GL T LI
Sbjct: 389 ELMISKDCFPNV------VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 233 NMYSRCGSIDRSVKVFEEMP----HRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLR 288
+ + + D + VF++M H N++T+ +L+ GL +G+ +A+ F ++ + +
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 289 PDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA-- 346
P Y + G VEDGW +F S+ S GV P + Y M+ R G+ EA
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 347 --FKFVEDMPIKPNS 359
K ED P+ P+S
Sbjct: 562 LFRKMREDGPL-PDS 575
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 149/338 (44%), Gaps = 25/338 (7%)
Query: 50 PIPDPTPYNTVIRHLA-LHSPTLATTLFSHMHRTGVTVDHFTFPLIXX---XXXXXXXXX 105
P+P +N ++ +A + L +L M R G++ + +T+ ++
Sbjct: 81 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 140
Query: 106 XXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCF 161
G+ +I ++L+N Y ++ AV L D+M + D +++TLI
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 162 TNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGL 221
+ +EA++L +M Q T GV V++ + G ++L + + A +
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGV----VVNGLCKRGDIDLAFNLLNKMEAAKI 256
Query: 222 GLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALR 277
V + + +I+ + D ++ +F EM ++ NV+T++SLI+ L + R +A R
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316
Query: 278 AFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESM--RS---EYGVYPMLEHYGC 332
DM E + P+ + A + A G + + ++++ M RS + Y L + C
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 333 MVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL-GAC 369
M D L A + F+ + PN V + TL+ G C
Sbjct: 377 MHDRLDEAKHM---FELMISKDCFPNVVTYNTLINGFC 411
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 118/287 (41%), Gaps = 22/287 (7%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQ----RDLASWSTLIVCFTNNGYPAEALSLF 174
+IF N L++A +L + L ++M + +L +++ LI CF + AL+L
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143
Query: 175 -QQMQLG-DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALI 232
+ M+LG +P + V + S+++ + + + + G T LI
Sbjct: 144 GKMMKLGYEPSI------VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 233 NMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLR 288
+ +V + + M R N+VT+ ++ GL G A M A +
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 257
Query: 289 PDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFK 348
+ Y+ + + +D +F M ++ GV P + Y ++ L +A +
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENK-GVRPNVITYSSLISCLCNYERWSDASR 316
Query: 349 FVEDM---PIKPNSVIWRTLLGACVNHNDLVLAEKAKERV--NELDP 390
+ DM I PN V + L+ A V LV AEK + + +DP
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 123/277 (44%), Gaps = 16/277 (5%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEA 170
GFA N++ N L+ + AV L EM + D+ S++T+I F +A
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
L L +M+ T G++ I A G ++ + ++ GL + + T+
Sbjct: 197 LELANEMKGSGCSWSLVTWGIL----IDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRN----VVTWTSLITGLAVHGRSREALRAFRDMREAG 286
LI + CG +DR +F+E+ R +T+ +LI G G+ +EA F M E G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
+RP+ YT + G ++ ++ M E P Y +++ L + G++ +A
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLM-IEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 347 FKFVEDMP---IKPNSVIWRTLLGACVNHNDLVLAEK 380
+ VE M +P+++ + LLG DL A K
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEALSLF 174
N+ NALI+A+ G A L+D+M +R D+ ++++L+ F + +A +F
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 175 QQMQLGD--PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGL-GLTVPLGTAL 231
+ M D P V V ++I +E G + + GL G TV T +
Sbjct: 389 EFMVSKDCFPDV------VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 232 INMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGL 287
++ G D + KVF++M +++T++ L+ GL +G+ +AL F M+++ +
Sbjct: 443 QGLFHD-GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 288 RPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAF 347
+ D YT + G V+DGW +F S+ S GV P + Y M+ L +L EA+
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 348 ----KFVEDMPIKPNSVIWRTLLGACVNHND 374
K ED P+ PNS + TL+ A + D
Sbjct: 561 ALLKKMKEDGPL-PNSGTYNTLIRAHLRDGD 590
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 148/338 (43%), Gaps = 25/338 (7%)
Query: 50 PIPDPTPYNTVIRHLA-LHSPTLATTLFSHMHRTGVTVDHFTFPLIXX---XXXXXXXXX 105
P+P +N ++ +A + + +L M R + +T+ ++
Sbjct: 81 PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 106 XXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCF 161
G+ +I ++L+N Y ++ AV L D+M + D +++TLI
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 162 TNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGL 221
+ +EA++L +M Q T GV V++ + G +L + + + A +
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGV----VVNGLCKRGDTDLALNLLNKMEAAKI 256
Query: 222 GLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALR 277
V + +I+ + +D ++ +F+EM + NVVT++SLI+ L +GR +A +
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 278 AFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESM--RS---EYGVYPMLEHYGC 332
DM E + P+ + A + A G + ++++ M RS + Y L + C
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 333 MVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL-GAC 369
M D L +A + F+F+ P+ V + TL+ G C
Sbjct: 377 MHDRLDKAK---QMFEFMVSKDCFPDVVTYNTLIKGFC 411
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 14/210 (6%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEALSLF 174
++ N LI + S + LF EM R D +++TLI ++G A +F
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 175 QQMQLGDPQVPESTDGVMMLSVI-SAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALIN 233
+QM + D P+ +M S++ + + G LE + V Y++++ + L + + T +I
Sbjct: 459 KQM-VSDGVPPD----IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Query: 234 MYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRP 289
+ G +D +F + + NVVT+ ++I+GL +EA + M+E G P
Sbjct: 514 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 573
Query: 290 DGAAYTAALVACSHGGLVEDGWRVFESMRS 319
+ Y + A G + MRS
Sbjct: 574 NSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 113/270 (41%), Gaps = 20/270 (7%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQRD----LASWSTLIVCFTNNGYPAEALSLF-QQMQ 178
N L++A ++ + L ++M + + L +++ LI CF + AL+L + M+
Sbjct: 89 NKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 179 LG-DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
LG +P + V + S+++ + + + + G T LI+
Sbjct: 149 LGYEPSI------VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 238 CGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
+V + + M R N+VT+ ++ GL G + AL M A + D
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+ + + V+D +F+ M ++ G+ P + Y ++ L G +A + + DM
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 354 ---PIKPNSVIWRTLLGACVNHNDLVLAEK 380
I PN V + L+ A V V AEK
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 16/261 (6%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEALSLF 174
++ LI A + A+ L DEM R D+ +++ L+ G EA+
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
M Q T +++ S+ S + A +L A + R G +V LIN
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL----LADMLRKGFSPSVVTFNILINF 353
Query: 235 YSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
R G + R++ + E+MP N +++ L+ G + A+ M G PD
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Query: 291 GAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFV 350
Y L A G VED + + S+ G P+L Y ++D L +AG +A K +
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLL 472
Query: 351 EDM---PIKPNSVIWRTLLGA 368
++M +KP+++ + +L+G
Sbjct: 473 DEMRAKDLKPDTITYSSLVGG 493
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 112/266 (42%), Gaps = 53/266 (19%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMP-QRDLASWSTLIVCFTNNGYPAEALSL 173
G ++ N +I+ Y +G +N A+ + D M D+ +++T++ ++G +A+ +
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 174 FQQMQLGD--PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTAL 231
+M D P V T I + A R +G+G
Sbjct: 227 LDRMLQRDCYPDVITYT---------------------ILIEATCRDSGVG--------- 256
Query: 232 INMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGL 287
++K+ +EM R +VVT+ L+ G+ GR EA++ DM +G
Sbjct: 257 -----------HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC 305
Query: 288 RPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAF 347
+P+ + L + G D ++ M + G P + + +++ L R G+L A
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSVVTFNILINFLCRKGLLGRAI 364
Query: 348 KFVEDMP---IKPNSVIWRTLL-GAC 369
+E MP +PNS+ + LL G C
Sbjct: 365 DILEKMPQHGCQPNSLSYNPLLHGFC 390
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 112/249 (44%), Gaps = 17/249 (6%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLA----SWSTLIVCFTNNGYPAEA 170
GF+ ++ N LIN G L A+ + ++MPQ S++ L+ F A
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 398
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
+ ++M + P D V ++++A+ G +E + + + G +
Sbjct: 399 IEYLERM-VSRGCYP---DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRNV----VTWTSLITGLAVHGRSREALRAFRDMREAG 286
+I+ ++ G +++K+ +EM +++ +T++SL+ GL+ G+ EA++ F + G
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 287 LRPDGAAYTAALVACSHGGLVEDG--WRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLL 344
+RP+ + + ++ + + VF R G P Y +++ L GM
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR---GCKPNETSYTILIEGLAYEGMAK 571
Query: 345 EAFKFVEDM 353
EA + + ++
Sbjct: 572 EALELLNEL 580
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 165/403 (40%), Gaps = 39/403 (9%)
Query: 16 QHNNPLSL--------RTFFLRCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLAL- 66
Q NP+ + RTF + + + + ++ P+P ++ V+ +A
Sbjct: 23 QKGNPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKS 82
Query: 67 HSPTLATTLFSHMHRTGVTVDHFTFPLIXXXX---XXXXXXXXXXXXXXXXGFASNIFVQ 123
+ L +LF HM G+ D +++ ++ G+ ++
Sbjct: 83 KNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTV 142
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
++LIN + + A+ L +M + D+ ++T+I G +A+ LF +M+
Sbjct: 143 SSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRME- 201
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHA--YIRRAGLGLTVP---LGTALINM 234
DGV +V G G W A +R + VP TA+I++
Sbjct: 202 --------RDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 235 YSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPD 290
+ + G ++K++EEM R +V T+ SLI GL +HGR EA + M G PD
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 291 GAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFV 350
Y + V++G ++F M ++ G+ Y ++ +AG A +
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREM-AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 351 EDMPIKPNSVIWRTLL-GACVN---HNDLVLAEKAKERVNELD 389
M +PN + LL G C+N LVL E ++ ELD
Sbjct: 373 SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 95/231 (41%), Gaps = 14/231 (6%)
Query: 169 EALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLG 228
E + LF +M P +P D V+S ++ +L I + ++ G+G +
Sbjct: 52 EEIDLFCKMIQSRP-LPSIVD---FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSY 107
Query: 229 TALINMYSRCGSIDRSVKVFEEMP----HRNVVTWTSLITGLAVHGRSREALRAFRDMRE 284
+IN RC ++ V +M +VVT +SLI G R +A+ M E
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167
Query: 285 AGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLL 344
G RPD Y + GLV D +F+ M + GV Y +V L +G
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD-GVRADAVTYNSLVAGLCCSGRWS 226
Query: 345 EAFKFVEDMPIK---PNSVIWRTLLGACVNHNDLVLAEKAKERVNE--LDP 390
+A + + DM ++ PN + + ++ V A K E + +DP
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 118/273 (43%), Gaps = 18/273 (6%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEM----PQRDLASWSTLIVCFTNNGYPAEA 170
G N+ AL+ +YG G N A +F M P+ ++ ++ F EA
Sbjct: 169 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 228
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
+F+ + L + + P D M +I G E V + + +G VP T
Sbjct: 229 EEVFETL-LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM----VGKGVPQSTV 283
Query: 231 LIN-MYSRCGSIDRSVKVFEEMPHRN----VVTWTSLITGLAVHGRSREALRAFRDMREA 285
N + S S K++++M + VV++ LI R EAL F +M +A
Sbjct: 284 TYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 343
Query: 286 GLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLE 345
G+RP AY L A + G+VE VF+SMR + ++P L Y M+ A +
Sbjct: 344 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR-IFPDLWSYTTMLSAYVNASDMEG 402
Query: 346 AFKFVEDMPI---KPNSVIWRTLLGACVNHNDL 375
A KF + + + +PN V + TL+ ND+
Sbjct: 403 AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV 435
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 126/272 (46%), Gaps = 16/272 (5%)
Query: 126 LINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
LI AYG G+ N A + + + ++ S++ L+ + G A ++F++MQ
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSI 241
P+ T +++ + + A E+ +++ L + +I MY + G+
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEV-FETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 242 DRSVKVFEEMPHRNV----VTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
+++ KVF M + V VT+ SL ++ +E + + M+ + ++PD +Y
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALL 320
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA---FKFVEDMP 354
+ A E+ VFE M + GV P + Y ++D +GM+ +A FK +
Sbjct: 321 IKAYGRARREEEALSVFEEML-DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 379
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVN 386
I P+ + T+L A VN +D+ AEK +R+
Sbjct: 380 IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK 411
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 124/268 (46%), Gaps = 16/268 (5%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
N +I + L +A F + + D +++ L++ F N G P +A +++ M+
Sbjct: 247 NQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEK 306
Query: 180 GDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCG 239
D + DG +I +++ G L+ + ++ L + + ++L++ + G
Sbjct: 307 TDSLL----DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAG 362
Query: 240 SIDRSVKVFEEMP---HRNVVT-WTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYT 295
+D S+KV+ EM HR T + SLI A G+ ALR + +M+++G RP+ YT
Sbjct: 363 RLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYT 422
Query: 296 AALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP- 354
+ + + G +E VF+ M + G P Y C++++ +G + A K M
Sbjct: 423 MIIESHAKSGKLEVAMTVFKDME-KAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTN 481
Query: 355 --IKPNSVIWRTLLGACVNHNDLVLAEK 380
++P + +LL N + +A K
Sbjct: 482 AGLRPGLSSYISLLTLLANKRLVDVAGK 509
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 118/273 (43%), Gaps = 18/273 (6%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEM----PQRDLASWSTLIVCFTNNGYPAEA 170
G N+ AL+ +YG G N A +F M P+ ++ ++ F EA
Sbjct: 176 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEA 235
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
+F+ + L + + P D M +I G E V + + +G VP T
Sbjct: 236 EEVFETL-LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM----VGKGVPQSTV 290
Query: 231 LIN-MYSRCGSIDRSVKVFEEMPHRN----VVTWTSLITGLAVHGRSREALRAFRDMREA 285
N + S S K++++M + VV++ LI R EAL F +M +A
Sbjct: 291 TYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 350
Query: 286 GLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLE 345
G+RP AY L A + G+VE VF+SMR + ++P L Y M+ A +
Sbjct: 351 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR-IFPDLWSYTTMLSAYVNASDMEG 409
Query: 346 AFKFVEDMPI---KPNSVIWRTLLGACVNHNDL 375
A KF + + + +PN V + TL+ ND+
Sbjct: 410 AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV 442
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 123/272 (45%), Gaps = 16/272 (5%)
Query: 126 LINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEALSLFQQMQLGD 181
LI AYG G+ N A + + + ++ S++ L+ + G A ++F++MQ
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 182 PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSI 241
P+ P + ++L E +++ L + +I MY + G+
Sbjct: 212 PE-PSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 242 DRSVKVFEEMPHRNV----VTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAA 297
+++ KVF M + V VT+ SL ++ +E + + M+ + ++PD +Y
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYALL 327
Query: 298 LVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA---FKFVEDMP 354
+ A E+ VFE M + GV P + Y ++D +GM+ +A FK +
Sbjct: 328 IKAYGRARREEEALSVFEEML-DAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 386
Query: 355 IKPNSVIWRTLLGACVNHNDLVLAEKAKERVN 386
I P+ + T+L A VN +D+ AEK +R+
Sbjct: 387 IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK 418
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 138/360 (38%), Gaps = 31/360 (8%)
Query: 52 PDPTPYNTVIRHLALHSPT-LATTLFSHMHRTGVTVDHFTFPLIX---XXXXXXXXXXXX 107
P+ Y V++ + T LA L M + +D + +I
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269
Query: 108 XXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTN 163
GF ++I + LI + +G + L +M +R D+ ++S LI CF
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
Query: 164 NGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGL 223
G EA L ++M Q S D V S+I L+ + + G G
Sbjct: 330 EGKLREAEELHKEM----IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Query: 224 TVPLGTALINMYSRCGSIDRSVKVFEEMPHRNVV----TWTSLITGLAVHGRSREALRAF 279
+ LIN Y + ID +++F +M R VV T+ +LI G G+ A F
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 280 RDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFE-----SMRSEYGVYPMLEHYGCMV 334
++M +RPD +Y L G E +FE M + G+Y ++ H C
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC-- 503
Query: 335 DLLGRAGMLLEAFKFVEDMP---IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPH 391
A + +A+ +P +KP+ + ++G L A+ ++ E D H
Sbjct: 504 ----NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE-DGH 558
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 116/274 (42%), Gaps = 20/274 (7%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEA 170
G A N++ + +IN L+LA ++ + D ++STLI G +EA
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 171 LSLFQQM-QLG-DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLG 228
L L +M ++G P + + + ++++ + G + + + + G
Sbjct: 162 LELVDRMVEMGHKPTL------ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 229 TALINMYSRCGSIDRSVKVFEEMPHRNV----VTWTSLITGLAVHGRSREALRAFRDMRE 284
++ + + G ++++ +M R + V ++ +I GL G A F +M
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 285 AGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLL 344
G + D YT + + G +DG ++ M + + P + + ++D + G L
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM-IKRKITPDVVAFSALIDCFVKEGKLR 334
Query: 345 EAFKFVEDM---PIKPNSVIWRTLLGACVNHNDL 375
EA + ++M I P++V + +L+ N L
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 124/269 (46%), Gaps = 20/269 (7%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEALSLF 174
N+ +ALI+A+ G L A L+DEM +R D+ ++S+LI F + EA +F
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 175 QQMQLGD--PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALI 232
+ M D P V V ++I ++ G+ + + + GL T LI
Sbjct: 385 ELMISKDCFPNV------VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 233 NMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLR 288
+ + + D + VF++M +++T++ L+ GL +G+ AL F ++ + +
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 289 PDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFK 348
PD Y + G VEDGW +F S+ S GV P + Y M+ R G+ EA
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 349 FVEDMPIK---PNSVIWRTLLGACVNHND 374
+M + P+S + TL+ A + D
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 156/359 (43%), Gaps = 25/359 (6%)
Query: 29 RCAELPSADTASYAAAVLLRFPIPDPTPYNTVIRHLA-LHSPTLATTLFSHMHRTGVTVD 87
R +L D + ++ P P ++ ++ +A ++ L +L M G++ +
Sbjct: 56 RLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHN 115
Query: 88 HFTFPLIXX---XXXXXXXXXXXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFD 144
+T+ ++ G+ +I N+L+N + ++ AV L
Sbjct: 116 LYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVG 175
Query: 145 EMP----QRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAV 200
+M Q D +++TLI + +EA++L +M + Q T G+ V++ +
Sbjct: 176 QMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI----VVNGL 231
Query: 201 SSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NV 256
G ++L + + + + + V + +I+ +++ ++ +F EM ++ NV
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 257 VTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFES 316
VT+ SLI L +GR +A R DM E + P+ ++A + A G + + ++++
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 317 M--RS---EYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL-GAC 369
M RS + Y L + CM D L A + F+ + PN V + TL+ G C
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM---FELMISKDCFPNVVTYNTLIKGFC 407
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 14/210 (6%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLA----SWSTLIVCFTNNGYPAEALSLF 174
N+ N LI + + ++ + LF EM QR L +++TLI F A +F
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 175 QQMQLGDPQVPESTDGVMMLSVI-SAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALIN 233
+QM + D +P+ +M S++ + + G +E + V Y++R+ + + +I
Sbjct: 455 KQM-VSDGVLPD----IMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIE 509
Query: 234 MYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRP 289
+ G ++ +F + + NVVT+T++++G G EA FR+M+E G P
Sbjct: 510 GMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLP 569
Query: 290 DGAAYTAALVACSHGGLVEDGWRVFESMRS 319
D Y + A G + MRS
Sbjct: 570 DSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 119/272 (43%), Gaps = 16/272 (5%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMP----QRDLASWSTLIVCFTNNGYPAEA 170
G + N++ + LIN + L+LA+ + +M + D+ + ++L+ F + ++A
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
+SL QM Q T ++ + + A+ L V + + V G
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVAL---VDRMVVKGCQPDLVTYGI- 226
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRN----VVTWTSLITGLAVHGRSREALRAFRDMREAG 286
++N + G ID ++ + ++M VV + ++I L + +AL F +M G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
+RP+ Y + + + G D R+ M E + P + + ++D + G L+EA
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDM-IERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 347 FKFVEDM---PIKPNSVIWRTLLGACVNHNDL 375
K ++M I P+ + +L+ H+ L
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 128/271 (47%), Gaps = 24/271 (8%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEALSLF 174
N+ NALI+A+ G A L D+M +R D+ ++++LI F + +A +F
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 313
Query: 175 QQMQLGD--PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGL-GLTVPLGTAL 231
+ M D P + ++I +E G + + GL G TV T +
Sbjct: 314 EFMVSKDCFPDLDTYN------TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 232 INMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGL 287
++ G D + KVF++M +++T++ L+ GL +G+ +AL F M+++ +
Sbjct: 368 QGLFHD-GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 288 RPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAF 347
+ D YT + G V+DGW +F S+ S GV P + Y M+ L +L EA+
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 348 ----KFVEDMPIKPNSVIWRTLLGACVNHND 374
K ED P+ P+S + TL+ A + D
Sbjct: 486 ALLKKMKEDGPL-PDSGTYNTLIRAHLRDGD 515
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 149/338 (44%), Gaps = 25/338 (7%)
Query: 50 PIPDPTPYNTVIRHLA-LHSPTLATTLFSHMHRTGVTVDHFTFPLIXX---XXXXXXXXX 105
P+P +N ++ +A + L +L M R G++ + +T+ ++
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 106 XXXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCF 161
G+ +I ++L+N Y ++ AV L D+M + D +++TLI
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 162 TNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGL 221
+ +EA++L +M Q T GV V++ + G ++L + + A +
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGV----VVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 222 GLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALR 277
V + +I+ + +D ++ +F+EM + NVVT++SLI+ L +GR +A +
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 278 AFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESM--RS---EYGVYPMLEHYGC 332
DM E + P+ + A + A G + ++ + M RS + Y L + C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 333 MVDLLGRAGMLLEAFKFVEDMPIKPNSVIWRTLL-GAC 369
M D L +A + F+F+ P+ + TL+ G C
Sbjct: 302 MHDRLDKAK---QMFEFMVSKDCFPDLDTYNTLIKGFC 336
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 14/205 (6%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEALSLFQQMQL 179
N LI + S + LF EM R D +++TLI ++G A +F+QM +
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM-V 387
Query: 180 GDPQVPESTDGVMMLSVI-SAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRC 238
D P+ +M S++ + + G LE + V Y++++ + L + + T +I +
Sbjct: 388 SDGVPPD----IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 239 GSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
G +D +F + + NVVT+ ++I+GL +EA + M+E G PD Y
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 295 TAALVACSHGGLVEDGWRVFESMRS 319
+ A G + MRS
Sbjct: 504 NTLIRAHLRDGDKAASAELIREMRS 528
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 114/275 (41%), Gaps = 20/275 (7%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQ----RDLASWSTLIVCFTNNGYPAEALSLF 174
+IF N L++A +L + L ++M + +L +++ LI CF + AL+L
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 175 -QQMQLG-DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALI 232
+ M+LG +P + V + S+++ + + + + G T LI
Sbjct: 69 GKMMKLGYEPSI------VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122
Query: 233 NMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLR 288
+ +V + + M R N+VT+ ++ GL G A M A +
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182
Query: 289 PDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFK 348
D + + + V+D +F+ M ++ G+ P + Y ++ L G +A +
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 349 FVEDM---PIKPNSVIWRTLLGACVNHNDLVLAEK 380
+ DM I PN V + L+ A V V AEK
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 276
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 151/391 (38%), Gaps = 68/391 (17%)
Query: 27 FLRCAELPSADTASYAAAVLLRFP----IPDPTPYNTVIRHLALHSPT-LATTLFSHMHR 81
F RC L SA A +V+ IPD + Y+ V+ +L S LA LF M R
Sbjct: 454 FTRC--LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Query: 82 TGVTVDHFTFPLIXXXXXXXXXXXXXXX---XXXXXGFASNIFVQNALINAYGSSGSLNL 138
G+ D +T+ ++ G N+ ALI+AY + ++
Sbjct: 512 GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSY 571
Query: 139 AVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPE-------- 186
A LF+ M ++ ++S LI G +A +F++M G VP+
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM-CGSKDVPDVDMYFKQY 630
Query: 187 -----------------------------------STDG-----VMMLSVISAVSSLGAL 206
S +G ++ ++I + +G L
Sbjct: 631 DDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKL 690
Query: 207 ELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSL 262
+ V + G T+ ++LI+ Y + D + KV +M NVV +T +
Sbjct: 691 DEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM 750
Query: 263 ITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYG 322
I GL G++ EA + + M E G +P+ YTA + G +E + E M S+ G
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK-G 809
Query: 323 VYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
V P Y ++D + G L A +E+M
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 111/279 (39%), Gaps = 31/279 (11%)
Query: 124 NALINAYGSSGSLNLAVHLFDEMPQ----RDLASWSTLI--VCFTNNGYPAEALSLFQQM 177
N+L++AY +SG + A L +M + ++ LI +C + + L L ++
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 435
Query: 178 QLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSR 237
+ + + S + S G E V + G + ++N
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 495
Query: 238 CGSIDRSVKVFEEMPH----RNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAA 293
++ + +FEEM +V T+T ++ G +A + F +MRE G P+
Sbjct: 496 ASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVT 555
Query: 294 YTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA------- 346
YTA + A V +FE+M SE G P + Y ++D +AG + +A
Sbjct: 556 YTALIHAYLKAKKVSYANELFETMLSE-GCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Query: 347 ------------FKFVEDMPIKPNSVIWRTLL-GACVNH 372
FK +D +PN V + LL G C +H
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 110/244 (45%), Gaps = 15/244 (6%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLI-VCFTNNGYPAEALSL 173
+I N +I Y +G A+ +M R D ++ T+I C+ ++ + ++L
Sbjct: 256 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDF-GSCVAL 314
Query: 174 FQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALIN 233
+Q+M QVP + VI + G L G V + R G V + T LI+
Sbjct: 315 YQEMDEKGIQVPPHAFSL----VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 234 MYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRP 289
Y++ GS++ ++++ M +VVT++ ++ GL +GR EAL F R GL
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAI 430
Query: 290 DGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKF 349
+ Y++ + G V++ R+FE M SE G Y ++D + + EA
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEM-SEKGCTRDSYCYNALIDAFTKHRKVDEAIAL 489
Query: 350 VEDM 353
+ M
Sbjct: 490 FKRM 493
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 20/286 (6%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMP----QRDLASWSTLIVCFTNNGYPAEA 170
G ++ N L+N S+ ++ A +F+ M + D+ +++T+I + G +A
Sbjct: 217 GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKA 276
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVP--LG 228
+ + M+ + D + +++I A + + G V Y G+ VP
Sbjct: 277 MEKLRDMETRGHE----ADKITYMTMIQACYADS--DFGSCVALYQEMDEKGIQVPPHAF 330
Query: 229 TALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMRE 284
+ +I + G ++ VFE M + NV +T LI G A G +A+R M +
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 285 AGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLL 344
G +PD Y+ + G VE+ F + R + G+ Y ++D LG+AG +
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD-GLAINSMFYSSLIDGLGKAGRVD 449
Query: 345 EAFKFVEDMPIKP---NSVIWRTLLGACVNHNDLVLAEKAKERVNE 387
EA + E+M K +S + L+ A H + A +R+ E
Sbjct: 450 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEE 495
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 106/248 (42%), Gaps = 19/248 (7%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLF----DEMPQRDLASWSTLIVCFTNNGYPAEA 170
G N+ + LI+ Y SGS+ A+ L DE + D+ ++S ++ NG EA
Sbjct: 357 GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
L F + + + + S+I + G ++ + + G A
Sbjct: 417 LDYFHTCRFDGLAI----NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 472
Query: 231 LINMYSRCGSIDRSVKVFEEMPH-----RNVVTWTSLITGLAVHGRSREALRAFRDMREA 285
LI+ +++ +D ++ +F+ M + V T+T L++G+ R+ EAL+ + M +
Sbjct: 473 LIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDK 532
Query: 286 GLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGC--MVDLLGRAGML 343
G+ P A + A G V ++ + E ++ C M++ L +AG +
Sbjct: 533 GITPTAACFRALSTGLCLSGKVARACKILD----ELAPMGVILDAACEDMINTLCKAGRI 588
Query: 344 LEAFKFVE 351
EA K +
Sbjct: 589 KEACKLAD 596
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 8/179 (4%)
Query: 195 SVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMP-- 252
++I + LG +E +WV ++ G+ T+ L+N +D + +VFE M
Sbjct: 192 ALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESG 251
Query: 253 --HRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDG 310
++VT+ ++I G G++++A+ RDM G D Y + AC
Sbjct: 252 RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSC 311
Query: 311 WRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM---PIKPNSVIWRTLL 366
+++ M E G+ + ++ L + G L E + E+M KPN I+ L+
Sbjct: 312 VALYQEM-DEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLI 369
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 116/271 (42%), Gaps = 17/271 (6%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLA----SWSTLIVCFTNNGYPAEA 170
G + V LI+ + G + A F EM RD+ +++ +I F G EA
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
LF +M + D V +I+ G ++ VH ++ +AG V T
Sbjct: 406 GKLFHEMFCKGLE----PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 231 LINMYSRCGSIDRSVKVFEEM----PHRNVVTWTSLITGLAVHGRSREALRAFRDMREAG 286
LI+ + G +D + ++ EM N+ T+ S++ GL G EA++ + AG
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
L D YT + A G ++ + + M + G+ P + + +++ GML +
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 347 FKFVEDM---PIKPNSVIWRTLLGA-CVNHN 373
K + M I PN+ + +L+ C+ +N
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 129/287 (44%), Gaps = 21/287 (7%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEA 170
G N+ N +I+ G + A HL M + D+ S+ST++ + G +
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
L + M+ + P S ++ ++ + L E IR+ L TV + T
Sbjct: 301 WKLIEVMKRKGLK-PNSYIYGSIIGLLCRICKLAEAEEAF--SEMIRQGILPDTV-VYTT 356
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRN----VVTWTSLITGLAVHGRSREALRAFRDMREAG 286
LI+ + + G I + K F EM R+ V+T+T++I+G G EA + F +M G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
L PD +T + G ++D +RV M + G P + Y ++D L + G L A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 347 FKFVEDM---PIKPNSVIWRTLL-GACVNHNDLVLAEKAKERVNELD 389
+ + +M ++PN + +++ G C + N E+A + V E +
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGN----IEEAVKLVGEFE 518
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/405 (19%), Positives = 149/405 (36%), Gaps = 61/405 (15%)
Query: 1 MNRVYNLHATLIKTGQHNNPL---SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPY 57
+++V+ L + + G N S+ R +L A+ A + ++ + +PD Y
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA--FSEMIRQGILPDTVVY 354
Query: 58 NTVIRHLALHSPT-LATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXX---XXXX 113
T+I A+ F MH +T D T+ I
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 114 XGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAE 169
G + LIN Y +G + A + + M Q ++ +++TLI G
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 170 ALSLFQQM-QLG-DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPL 227
A L +M ++G P + S+++ + G +E + + AGL
Sbjct: 475 ANELLHEMWKIGLQPNIFTYN------SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 228 GTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGR------------ 271
T L++ Y + G +D++ ++ +EM + +VT+ L+ G +HG
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 272 -------------------SREALRA----FRDMREAGLRPDGAAYTAALVACSHGGLVE 308
R L+A ++DM G+ PDG Y + ++
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 309 DGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+ W +F+ M+ + G + Y ++ + LEA + + M
Sbjct: 649 EAWFLFQEMKGK-GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 116/271 (42%), Gaps = 17/271 (6%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLA----SWSTLIVCFTNNGYPAEA 170
G + V LI+ + G + A F EM RD+ +++ +I F G EA
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
LF +M + D V +I+ G ++ VH ++ +AG V T
Sbjct: 406 GKLFHEMFCKGLE----PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 231 LINMYSRCGSIDRSVKVFEEM----PHRNVVTWTSLITGLAVHGRSREALRAFRDMREAG 286
LI+ + G +D + ++ EM N+ T+ S++ GL G EA++ + AG
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
L D YT + A G ++ + + M + G+ P + + +++ GML +
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 347 FKFVEDM---PIKPNSVIWRTLLGA-CVNHN 373
K + M I PN+ + +L+ C+ +N
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 129/287 (44%), Gaps = 21/287 (7%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEA 170
G N+ N +I+ G + A HL M + D+ S+ST++ + G +
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
L + M+ + P S ++ ++ + L E IR+ L TV + T
Sbjct: 301 WKLIEVMKRKGLK-PNSYIYGSIIGLLCRICKLAEAEEAF--SEMIRQGILPDTV-VYTT 356
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRN----VVTWTSLITGLAVHGRSREALRAFRDMREAG 286
LI+ + + G I + K F EM R+ V+T+T++I+G G EA + F +M G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
L PD +T + G ++D +RV M + G P + Y ++D L + G L A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 347 FKFVEDM---PIKPNSVIWRTLL-GACVNHNDLVLAEKAKERVNELD 389
+ + +M ++PN + +++ G C + N E+A + V E +
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGN----IEEAVKLVGEFE 518
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/405 (19%), Positives = 149/405 (36%), Gaps = 61/405 (15%)
Query: 1 MNRVYNLHATLIKTGQHNNPL---SLRTFFLRCAELPSADTASYAAAVLLRFPIPDPTPY 57
+++V+ L + + G N S+ R +L A+ A + ++ + +PD Y
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA--FSEMIRQGILPDTVVY 354
Query: 58 NTVIRHLALHSPT-LATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXX---XXXX 113
T+I A+ F MH +T D T+ I
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 114 XGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAE 169
G + LIN Y +G + A + + M Q ++ +++TLI G
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 170 ALSLFQQM-QLG-DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPL 227
A L +M ++G P + S+++ + G +E + + AGL
Sbjct: 475 ANELLHEMWKIGLQPNIFTYN------SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 228 GTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGR------------ 271
T L++ Y + G +D++ ++ +EM + +VT+ L+ G +HG
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 272 -------------------SREALRA----FRDMREAGLRPDGAAYTAALVACSHGGLVE 308
R L+A ++DM G+ PDG Y + ++
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 309 DGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM 353
+ W +F+ M+ + G + Y ++ + LEA + + M
Sbjct: 649 EAWFLFQEMKGK-GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 123/300 (41%), Gaps = 57/300 (19%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDL----ASWSTLIVCFTNNGYPAEA 170
G + N+FV NALI++ + A LFD M + L ++S LI F G A
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
LS +M GL L+V +
Sbjct: 422 LSFLGEMV---------------------------------------DTGLKLSVYPYNS 442
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRN----VVTWTSLITGLAVHGRSREALRAFRDMREAG 286
LIN + + G I + EM ++ VVT+TSL+ G G+ +ALR + +M G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
+ P +T L GL+ D ++F M +E+ V P Y M++ G + +A
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM-AEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 347 FKFVEDMP---IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGDYVLLSNAY 403
F+F+++M I P++ +R L+ + L L +A E +D H G+ L Y
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLI------HGLCLTGQASEAKVFVDGLHKGNCELNEICY 615
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 118/290 (40%), Gaps = 43/290 (14%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLA----SWSTLIVCFTNNGYPAEALSLF 174
+ +L+ Y S G +N A+ L+ EM + +A +++TL+ G +A+ LF
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALEL-------GIWVHAYIRRA---GLGLT 224
+M + + T VM+ A E GI Y R GL LT
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590
Query: 225 VPLG---------------------TALINMYSRCGSIDRSVKVFEEMPHRNV----VTW 259
T L++ + R G ++ ++ V +EM R V V +
Sbjct: 591 GQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY 650
Query: 260 TSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRS 319
LI G H + ++M + GL+PD YT+ + A S G ++ + +++ M +
Sbjct: 651 GVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710
Query: 320 EYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM-PIK--PNSVIWRTLL 366
E G P Y +++ L +AG + EA M P+ PN V + L
Sbjct: 711 E-GCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL 759
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 13/228 (5%)
Query: 167 PAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVP 226
P ++L +F +M+ D + ++V++ + L L + +R GL TV
Sbjct: 102 PFDSLRVFHKMKDFDCDPSQKA----YVTVLAILVEENQLNLAFKFYKNMREIGLPPTVA 157
Query: 227 LGTALINMYSRC-GSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRD 281
LI R G++D +K+F EMP R + T+ +LI+GL GR EA + F +
Sbjct: 158 SLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTE 217
Query: 282 MREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAG 341
M E P YT+ + V++ R E M+S+ G+ P + Y ++D L + G
Sbjct: 218 MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSK-GIEPNVFTYSSLMDGLCKDG 276
Query: 342 MLLEAFKFVEDM---PIKPNSVIWRTLLGACVNHNDLVLAEKAKERVN 386
L+A + E M +PN V + TL+ + A + +R+N
Sbjct: 277 RSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMN 324
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 29/260 (11%)
Query: 135 SLNLAVHLFDEMPQRDL----ASWSTLIVCFT-NNGYPAEALSLFQQMQLGDPQVPESTD 189
LNLA + M + L AS + LI N+G L +F +M P+ D
Sbjct: 136 QLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEM----PKRGCDPD 191
Query: 190 GVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGS--IDRSVKV 247
++IS + G ++ + + TV T+LIN CGS +D +++
Sbjct: 192 SYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLIN--GLCGSKNVDEAMRY 249
Query: 248 FEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSH 303
EEM + NV T++SL+ GL GRS +A+ F M G RP+ YT +
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309
Query: 304 GGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM---PIKPNSV 360
+++ + + M + G+ P YG ++ EA F+++M I PN +
Sbjct: 310 EQKIQEAVELLDRMNLQ-GLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRL 368
Query: 361 IW--------RTLLGACVNH 372
W + G C N+
Sbjct: 369 TWNIHVKTSNEVVRGLCANY 388
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 132/287 (45%), Gaps = 30/287 (10%)
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLA----SWSTLIVCFTNNGYPAEAL 171
FA N+ ++N L + ++A LFDEM QR LA ++STLI F G AL
Sbjct: 156 FAYNVVLRNVL-----RAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSAL 210
Query: 172 SLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTAL 231
S Q+M+ Q S D V+ ++I L I + + ++R+G+ + ++
Sbjct: 211 SWLQKME----QDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSM 266
Query: 232 INMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGL 287
IN+Y + + + +EM N V++++L++ + + EAL F +M+E
Sbjct: 267 INVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNC 326
Query: 288 RPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA- 346
D + +V++ R+F S+R + + P + Y ++ + G A + EA
Sbjct: 327 ALDLTTCNIMIDVYGQLDMVKEADRLFWSLR-KMDIEPNVVSYNTILRVYGEAELFGEAI 385
Query: 347 --FKFVEDMPIKPNSVIWRTLL---GACVNHNDLVLAEKAKERVNEL 388
F+ ++ I+ N V + T++ G + H EKA V E+
Sbjct: 386 HLFRLMQRKDIEQNVVTYNTMIKIYGKTMEH------EKATNLVQEM 426
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 139/322 (43%), Gaps = 18/322 (5%)
Query: 119 NIFVQNALINAYGSSGSLNLAVHLFDEMPQRDL----ASWSTLIVCFTNNGYPAEALSLF 174
N+ N ++ YG + A+HLF M ++D+ +++T+I + +A +L
Sbjct: 364 NVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLV 423
Query: 175 QQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINM 234
Q+MQ + + + ++IS G L+ + +R +G+ + L +I
Sbjct: 424 QEMQSRGIE----PNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVA 479
Query: 235 YSRCGSIDRSVKVFEEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAY 294
Y R G + + ++ E+ + + + IT LA GR+ EA FR E+G D + +
Sbjct: 480 YERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVF 539
Query: 295 TAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP 354
+ S + VFE MR+ G +P +++ G+ +A +M
Sbjct: 540 GCMINLYSRNQRYVNVIEVFEKMRTA-GYFPDSNVIAMVLNAYGKQREFEKADTVYREMQ 598
Query: 355 ----IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDGD--YVLLSNAYXXXXX 408
+ P+ V ++ +L + D + E +R+ E DP+ + +++++ Y
Sbjct: 599 EEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFQRL-ESDPNVNSKELHLVVAALYERADK 656
Query: 409 XXXXXXVRNSMRENRIVKE-PG 429
V N MRE I+K PG
Sbjct: 657 LNDASRVMNRMRERGILKPFPG 678
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 113/257 (43%), Gaps = 25/257 (9%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEA 170
G ++ N++IN YG + A L EM + + S+STL+ + N EA
Sbjct: 255 GITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEA 314
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
LS+F +M+ + + +T + M+ V + + + W +R+ + V
Sbjct: 315 LSVFAEMKEVNCALDLTTCNI-MIDVYGQLDMVKEADRLFWS---LRKMDIEPNVVSYNT 370
Query: 231 LINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRA---FRDMR 283
++ +Y ++ +F M + NVVT+ ++I ++G++ E +A ++M+
Sbjct: 371 ILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMI---KIYGKTMEHEKATNLVQEMQ 427
Query: 284 EAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCM------VDLL 337
G+ P+ Y+ + G ++ +F+ +RS GV Y M V L+
Sbjct: 428 SRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSS-GVEIDQVLYQTMIVAYERVGLM 486
Query: 338 GRAGMLLEAFKFVEDMP 354
G A LL K +++P
Sbjct: 487 GHAKRLLHELKLPDNIP 503
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 112/236 (47%), Gaps = 13/236 (5%)
Query: 142 LFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVS 201
+ D P ++ ++ TLI F G A LF+ M+ Q D + ++I
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVME----QRGIEPDLIAYSTLIDGYF 332
Query: 202 SLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVV 257
G L +G + + G+ L V + ++ I++Y + G + + V++ M + NVV
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 258 TWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESM 317
T+T LI GL GR EA + + + G+ P Y++ + G + G+ ++E M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 318 RSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDM---PIKPNSVIWRTLL-GAC 369
+ G P + YG +VD L + G++L A +F M I+ N V++ +L+ G C
Sbjct: 453 -IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 120/271 (44%), Gaps = 19/271 (7%)
Query: 115 GFASNIFVQNALINAYGSSG----SLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEA 170
G+ ++ + L++ G ++ +V + + + ++ +++LI + EA
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 171 LSLFQQMQLG--DPQVPESTDGVMMLSVIS-AVSSLGALELGIWVHAYIRRAGLGLTVPL 227
L +F+ M + P V T VM +S++ A +G+ + ++R + + +
Sbjct: 516 LKVFRLMGIYGIKPDVATFTT-VMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAV 574
Query: 228 GTALINMYSRCGSIDRSVKVF----EEMPHRNVVTWTSLITGLAVHGRSREALRAFRDMR 283
+I++ +C I+ + K F E ++VT+ ++I G R EA R F ++
Sbjct: 575 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 634
Query: 284 EAGLRPDGAAYTAAL-VACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGM 342
P+ T + V C + + DG S+ +E G P YGC++D ++
Sbjct: 635 VTPFGPNTVTLTILIHVLCKNNDM--DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 692
Query: 343 LLEAFKFVEDMP---IKPNSVIWRTLL-GAC 369
+ +FK E+M I P+ V + ++ G C
Sbjct: 693 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 723
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 118/271 (43%), Gaps = 56/271 (20%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEA 170
G+ N+ V N LI+ +G LN+A+ L +EM ++ D+ +++TL+ +G ++A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
+ + M + + V TA
Sbjct: 231 ARMLRDMM---------------------------------------KRSINPDVVTFTA 251
Query: 231 LINMYSRCGSIDRSVKVFEEMPHRNV----VTWTSLITGLAVHGRSREALRAFRDMREAG 286
LI+++ + G++D + ++++EM +V VT+ S+I GL +HGR +A + F M G
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSE-----YGVYPMLEHYGCMVDLLGRAG 341
P+ Y + +V++G ++F+ M E Y L H C V G+
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV---GKLR 368
Query: 342 MLLEAFKFVEDMPIKPNSVIWRTLL-GACVN 371
+ L+ F ++ + P+ + LL G CVN
Sbjct: 369 VALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 19/231 (8%)
Query: 150 DLASWSTLIVCFTNNGYPAEALSLF-QQMQLG-DPQVPESTDGVMMLSVISAVSSLG-AL 206
DL S++ LI CF + ALS+ + M+LG +P + +L V+ +G A
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGS---LLHGFCLVNRIGDAF 161
Query: 207 ELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSL 262
L I + ++G V + LI+ + G ++ ++++ EM + +VVT+ +L
Sbjct: 162 SLVIL----MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217
Query: 263 ITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYG 322
+TGL GR +A R RDM + + PD +TA + G +++ +++ M +
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM-IQSS 276
Query: 323 VYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMPIK---PNSVIWRTLL-GAC 369
V P Y +++ L G L +A K + M K PN V + TL+ G C
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFC 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 122/317 (38%), Gaps = 21/317 (6%)
Query: 52 PDPTPYNTVIRHLALHSP-TLATTLFSHMHRTGVTVDHFTFPLIXXXXXXX---XXXXXX 107
P+ YNT+I L + +A L + M + G+ D T+ +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 108 XXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDL----ASWSTLIVCFTN 163
++ ALI+ + G+L+ A L+ EM Q + +++++I
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 164 NGYPAEALSLFQQMQLGD--PQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGL 221
+G +A F M P V V ++IS ++ G+ + + G
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNV------VTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 222 GLTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALR 277
+ LI+ Y + G + ++ +F M R +++T L+ GL V+G AL
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 278 AFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLL 337
F DMRE+ AY + VE W +F + E GV P Y M+ L
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE-GVKPDARTYTIMILGL 466
Query: 338 GRAGMLLEAFKFVEDMP 354
+ G EA + + M
Sbjct: 467 CKNGPRREADELIRRMK 483
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 22/290 (7%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMP----QRDLASWSTLIVCFTNNGYPAEA 170
GF ++ +L+N Y + A+ LFD++ + ++ +++TLI C N + A
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
+ LF QM + + V ++++ + +G W+ + + + V TA
Sbjct: 208 VELFNQMGTNGSR----PNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 231 LINMYSRCGSIDRSVKVFEEM----PHRNVVTWTSLITGLAVHGRSREALRAFRDMREAG 286
LI+ + + G + + +++ M + +V T+ SLI GL ++G EA + F M G
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVD---LLGRAGML 343
P+ YT + VEDG ++F M S+ GV Y ++ L+GR +
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM-SQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 344 LEAFKFVEDMPIKPNSVIWRTLL-GACVN---HNDLVLAEKAKERVNELD 389
E F + P+ + LL G C N L++ E ++R E+D
Sbjct: 383 QEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR--EMD 430
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 20/284 (7%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEA 170
G N+ NAL+ G A L +M +R ++ +++ LI F G EA
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
L+ M Q+ D S+I+ + G L+ + + R G + T
Sbjct: 278 KELYNVM----IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTT 333
Query: 231 LINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAG 286
LI+ + + ++ +K+F EM + N +T+T LI G + GR A F M
Sbjct: 334 LIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR 393
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
PD Y L G VE +FE MR ++ Y ++ + + G + +A
Sbjct: 394 APPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT-YTIIIQGMCKLGKVEDA 452
Query: 347 FKFVEDM---PIKPNSVIWRTLL-GAC---VNHNDLVLAEKAKE 383
F + +KPN + + T++ G C + H L +K KE
Sbjct: 453 FDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLA----SWSTLIVCFTNNGYPAEA 170
G N + LI+ + S + + +F EM Q+ + +++ LI + G P A
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVA 382
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
+F QM T V++ + G +E + + Y+R+ + + + T
Sbjct: 383 QEVFNQMSSRRAPPDIRTYNVLL----DGLCCNGKVEKALMIFEYMRKREMDINIVTYTI 438
Query: 231 LINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAG 286
+I + G ++ + +F + + NV+T+T++I+G G EA F+ M+E G
Sbjct: 439 IIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Query: 287 LRPDGAAY 294
P+ + Y
Sbjct: 499 FLPNESVY 506
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 109/259 (42%), Gaps = 17/259 (6%)
Query: 126 LINAYGSSGSLNLAVHLFDEM----PQRDLASWSTLIVCFTNNGYP-AEALSLFQQMQLG 180
+++AY +G A+ LF+ M P L +++ ++ F G + L + +M+
Sbjct: 216 ILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSK 275
Query: 181 DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGS 240
+ E T +V+SA + G L A ++ G AL+ ++ + G
Sbjct: 276 GLKFDEFTCS----TVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 241 IDRSVKVFEEMPHRNV----VTWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTA 296
++ V +EM + VT+ L+ G S+EA M + G+ P+ YT
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 297 ALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP-- 354
+ A G ++ ++F SM+ E G P Y ++ LLG+ E K + DM
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMK-EAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSN 450
Query: 355 -IKPNSVIWRTLLGACVNH 372
PN W T+L C N
Sbjct: 451 GCSPNRATWNTMLALCGNK 469
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 134/330 (40%), Gaps = 33/330 (10%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMP----QRDLASWSTLIVCFTNNGYPAEA 170
G + F + +++A G L A F E+ + +++ L+ F G EA
Sbjct: 276 GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEA 335
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
LS+ ++M+ + P D V +++A G + V + + G+ T
Sbjct: 336 LSVLKEME--ENSCP--ADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 231 LINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAG 286
+I+ Y + G D ++K+F M N T+ ++++ L RS E ++ DM+ G
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG 451
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
P+ A + L C + G+ + RVF M+S G P + + ++ GR G ++A
Sbjct: 452 CSPNRATWNTMLALCGNKGMDKFVNRVFREMKS-CGFEPDRDTFNTLISAYGRCGSEVDA 510
Query: 347 FKFVEDMPIKPNSVIWRTLLGACV-NHNDLV--LAEKAKERVNE---LDPHHDG------ 394
K +M R ACV +N L+ LA K R E D G
Sbjct: 511 SKMYGEMT--------RAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTET 562
Query: 395 DYVLLSNAYXXXXXXXXXXXVRNSMRENRI 424
Y L+ Y + N ++E +I
Sbjct: 563 SYSLMLQCYAKGGNYLGIERIENRIKEGQI 592
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 223 LTVPLGTALINMYSRCGSIDRSVKVFEEM----PHRNVVTWTSLITGLAVHGRS-REALR 277
L V T +++ YSR G ++++ +FE M P +VT+ ++ GRS R+ L
Sbjct: 208 LDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILG 267
Query: 278 AFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLL 337
+MR GL+ D + L AC+ GL+ + F ++S G P Y ++ +
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKS-CGYEPGTVTYNALLQVF 326
Query: 338 GRAGMLLEAFKFVEDM---PIKPNSVIWRTLLGACV 370
G+AG+ EA +++M +SV + L+ A V
Sbjct: 327 GKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYV 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/290 (18%), Positives = 118/290 (40%), Gaps = 16/290 (5%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDL----ASWSTLIVCFTNNGYPAEA 170
GF + + NAL+NA G ++ +M + S+S ++ C+ G
Sbjct: 521 GFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGI 580
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
+ +++ G Q+ S +++ +++ A AL ++ G + + +
Sbjct: 581 ERIENRIKEG--QIFPS--WMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNS 636
Query: 231 LINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAG 286
++++++R D++ + E + ++VT+ SL+ G +A + + ++
Sbjct: 637 MLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 696
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
L+PD +Y + GL+++ R+ M +E G+ P + Y V GM E
Sbjct: 697 LKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM-TERGIRPCIFTYNTFVSGYTAMGMFAEI 755
Query: 347 FKFVEDMP---IKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHD 393
+E M +PN + ++ ++ A ++ DP D
Sbjct: 756 EDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFD 805
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 14/254 (5%)
Query: 126 LINAYGSSGSLNLAVHLFDEMPQRDLASWSTLIVCFTNNGYPAEALSLFQQ--MQLGDPQ 183
+IN+Y S SLNL++ F+EM S CF S F Q + +
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSN---CFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 184 VPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALINMYSRCGSIDR 243
D +I G +E + + G V + T LI+ + G I++
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 244 SVKVFEEMPHRNVV----TWTSLITGLAVHGRSREALRAFRDMREAGLRPDGAAYTAALV 299
+ +F EM +V T+T LI GL +G ++ + M+E G+ P+ Y +
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 300 ACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEAFKFVEDMP---IK 356
G +D ++VF+ MR E GV + Y ++ L R L EA K V+ M I
Sbjct: 277 QLCKDGRTKDAFQVFDEMR-ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 357 PNSVIWRTLL-GAC 369
PN + + TL+ G C
Sbjct: 336 PNLITYNTLIDGFC 349
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 131/332 (39%), Gaps = 67/332 (20%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLA----SWSTLIVCFTNNGYPAEA 170
GF+ N+ + LI+ G + A LF EM + L +++ LI NG +
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQG 252
Query: 171 LSLFQQMQLGDPQVPESTDGVM-----MLSVISAVSSLGALELGIWVHAYIRRAGLGLTV 225
++++MQ DGV V++ + G + V +R G+ +
Sbjct: 253 FEMYEKMQ---------EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNI 303
Query: 226 PLGTALINMYSRCGSIDRSVKVFEEMP----HRNVVTWTSLITGLAVHGRSREALRAFRD 281
LI R ++ + KV ++M + N++T+ +LI G G+ +AL RD
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD 363
Query: 282 -----------------------------------MREAGLRPDGAAYTAALVACSHGGL 306
M E G++P YT + +
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDN 423
Query: 307 VEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA---FKFVEDMPIKPNSVIWR 363
+E ++ SM E G+ P + Y ++ G + EA FK + + +PN VI+
Sbjct: 424 MEKAIQLRLSME-ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482
Query: 364 TL-LGAC---VNHNDLVLAEKAKERVNELDPH 391
T+ LG C ++ L L ++ +E+ EL P+
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEK--ELAPN 512
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 16/264 (6%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMP----QRDLASWSTLIVCFTNNGYPAEA 170
G ++ N L++AYG SG ++ L+ EM + + + + +I G +A
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 171 LSLFQQMQLGDPQVPES-TDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGT 229
L L+ + P + T G +I +S G L + + G +
Sbjct: 875 LDLYYDLMSDRDFSPTACTYG----PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 930
Query: 230 ALINMYSRCGSIDRSVKVFEEMPHRNV----VTWTSLITGLAVHGRSREALRAFRDMREA 285
LIN + + G D + +F+ M V T++ L+ L + GR E L F++++E+
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990
Query: 286 GLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLE 345
GL PD Y + +E+ +F M++ G+ P L Y ++ LG AGM+ E
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 346 AFKFVEDMP---IKPNSVIWRTLL 366
A K ++ ++PN + L+
Sbjct: 1051 AGKIYNEIQRAGLEPNVFTFNALI 1074
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 146/365 (40%), Gaps = 22/365 (6%)
Query: 51 IPDPTPYNTVIRHLA-LHSPTLATTLFSHMHRTGVTVDHFTFPLIXX---XXXXXXXXXX 106
+P+ YNT+I L +H A LF +M GV +T+ +
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 107 XXXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQ----RDLASWSTLIVCFT 162
G A NI NA + + +G A +F + D +++ ++ C++
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 163 NNGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLG 222
G EA+ L +M + D +++ S+I+ + ++ + ++ L
Sbjct: 515 KVGEIDEAIKLLSEMMENGCE----PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLK 570
Query: 223 LTVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRA 278
TV L+ + G I ++++FE M + N +T+ +L L + AL+
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKM 630
Query: 279 FRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLG 338
M + G PD Y + G V++ F M+ VYP ++ +
Sbjct: 631 LFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL--VYPDFVTLCTLLPGVV 688
Query: 339 RAGMLLEAFK----FVEDMPIKPNSVIWRTLLGACVNHNDLVLAEKAKERVNELDPHHDG 394
+A ++ +A+K F+ + +P ++ W L+G+ + + A ER+ DG
Sbjct: 689 KASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDG 748
Query: 395 DYVLL 399
D +L+
Sbjct: 749 DSILV 753
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 83/212 (39%), Gaps = 48/212 (22%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEA 170
G N + N LIN +G +G + A LF M + DL ++S L+ C G E
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
L F+++ + +GL V
Sbjct: 981 LHYFKEL---------------------------------------KESGLNPDVVCYNL 1001
Query: 231 LINMYSRCGSIDRSVKVFEEMPHR-----NVVTWTSLITGLAVHGRSREALRAFRDMREA 285
+IN + ++ ++ +F EM ++ T+ SLI L + G EA + + +++ A
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 286 GLRPDGAAYTAALVACSHGGLVEDGWRVFESM 317
GL P+ + A + S G E + V+++M
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 134/323 (41%), Gaps = 21/323 (6%)
Query: 57 YNTVIRHLALHSPT-LATTLFSHMHRTGVTVDHFTFPLIXXXXXXXXXXXXXXXXXXXXG 115
YNT+++ LA A +FS M TG + +T+ L+
Sbjct: 308 YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISK 367
Query: 116 FASNIFVQNALINAYGSSGSLNLAVHLFDEM------PQRDLASWSTLIVCFTNNGYPAE 169
+ + L+ G ++ A LF +M +RD S+ +++ G E
Sbjct: 368 RYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERD--SYMSMLESLCGAGKTIE 425
Query: 170 ALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGT 229
A+ + ++ + TD +M +V SA+ L + + +++ G +
Sbjct: 426 AIEMLSKIH----EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYN 481
Query: 230 ALINMYSRCGSIDRSVKVFEEMPHRN----VVTWTSLITGLAVHGRSREALRAFRDMREA 285
LI + R G +D ++ +FEE+ + ++++ SLI L +G EA F++M+E
Sbjct: 482 ILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK 541
Query: 286 GLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLE 345
GL PD Y+ + VE + +FE M + G P + Y ++D L + G E
Sbjct: 542 GLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVK-GCQPNIVTYNILLDCLEKNGRTAE 600
Query: 346 AFKFVEDMP---IKPNSVIWRTL 365
A M + P+S+ + L
Sbjct: 601 AVDLYSKMKQQGLTPDSITYTVL 623
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 135/330 (40%), Gaps = 20/330 (6%)
Query: 52 PDPTPYNTVIR-HLALHSPTLATTLFSHMHRTGVTVDHFTFPLIX---XXXXXXXXXXXX 107
P YNTV+ + A L HM GV D T+ ++
Sbjct: 266 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL 325
Query: 108 XXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLA----SWSTLIVCFTN 163
N N LIN + + G + +A L +EM L+ +++ LI +
Sbjct: 326 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 385
Query: 164 NGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGL 223
G EAL +F M+ E + GV++ + +L + ++R G+ +
Sbjct: 386 EGNFKEALKMFYMMEAKGLTPSEVSYGVLL----DGLCKNAEFDLARGFYMRMKRNGVCV 441
Query: 224 TVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAF 279
T +I+ + G +D +V + EM ++VT+++LI G GR + A
Sbjct: 442 GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 501
Query: 280 RDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGR 339
+ GL P+G Y+ + C G +++ R++E+M E + +V L +
Sbjct: 502 CRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT-FNVLVTSLCK 560
Query: 340 AGMLLEAFKFVEDMP---IKPNSVIWRTLL 366
AG + EA +F+ M I PN+V + L+
Sbjct: 561 AGKVAEAEEFMRCMTSDGILPNTVSFDCLI 590
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 140/344 (40%), Gaps = 24/344 (6%)
Query: 52 PDPTPYNTVIRHLALHSPTL-ATTLFSHMHRTGVTVDHFTFPLIX---XXXXXXXXXXXX 107
P+ YNT+I + L A+ L + M G++ +H TF +
Sbjct: 336 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 395
Query: 108 XXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLA----SWSTLIVCFTN 163
G + L++ + +LA + M + + +++ +I
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 455
Query: 164 NGYPAEALSLFQQMQLG--DPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGL 221
NG+ EA+ L +M DP + V ++I+ +G + + I R GL
Sbjct: 456 NGFLDEAVVLLNEMSKDGIDPDI------VTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509
Query: 222 GLTVPLGTALINMYSRCGSIDRSVKVFEEMP----HRNVVTWTSLITGLAVHGRSREALR 277
+ + LI R G + +++++E M R+ T+ L+T L G+ EA
Sbjct: 510 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 569
Query: 278 AFRDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLL 337
R M G+ P+ ++ + + G + VF+ M ++ G +P YG ++ L
Sbjct: 570 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM-TKVGHHPTFFTYGSLLKGL 628
Query: 338 GRAGMLLEAFKFVEDM---PIKPNSVIWRTLLGACVNHNDLVLA 378
+ G L EA KF++ + P ++V++ TLL A +L A
Sbjct: 629 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 672
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 91/208 (43%), Gaps = 11/208 (5%)
Query: 117 ASNIFVQNALINAYGSSGSLNLAVHLFDEMPQR----DLASWSTLIVCFTNNGYPAEALS 172
A + + N L+ A SG+L AV LF EM QR D ++++LI G A+
Sbjct: 650 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 709
Query: 173 LFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTALI 232
++ + +P + VM + + G + GI+ + G + A+I
Sbjct: 710 FAKEAEARGNVLP---NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMI 766
Query: 233 NMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAGLR 288
+ YSR G I+++ + EM ++ N+ T+ L+ G + + +R + G+
Sbjct: 767 DGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGIL 826
Query: 289 PDGAAYTAALVACSHGGLVEDGWRVFES 316
PD + ++ ++E G ++ ++
Sbjct: 827 PDKLTCHSLVLGICESNMLEIGLKILKA 854
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 115/298 (38%), Gaps = 21/298 (7%)
Query: 52 PDPTPYNTVIRHLALHSPT-LATTLFSHMHRTGVTVDHFTFPLIXX---XXXXXXXXXXX 107
P+ Y V+ + T LA L M + +D + +I
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNL 285
Query: 108 XXXXXXXGFASNIFVQNALINAYGSSGSLNLAVHLFDEMPQRDLA----SWSTLIVCFTN 163
GF ++I N LI + ++G + L +M +R ++ ++S LI F
Sbjct: 286 FNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Query: 164 NGYPAEALSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGL 223
G EA L ++M Q + + + S+I LE I + + G
Sbjct: 346 EGKLREADQLLKEMM----QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP 401
Query: 224 TVPLGTALINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAF 279
+ LIN Y + ID +++F EM R N VT+ +L+ G G+ A + F
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 280 RDMREAGLRPDGAAYTAALVACSHGGLVEDGWRVF-----ESMRSEYGVYPMLEHYGC 332
++M +RPD +Y L G +E +F M + G+Y ++ H C
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 119/277 (42%), Gaps = 16/277 (5%)
Query: 115 GFASNIFVQNALINAYGSSGSLNLAVHLFDEMP----QRDLASWSTLIVCFTNNGYPAEA 170
G + N L+N +G ++ AV L D M Q + ++ ++ +G A A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 171 LSLFQQMQLGDPQVPESTDGVMMLSVISAVSSLGALELGIWVHAYIRRAGLGLTVPLGTA 230
+ L ++M+ + ++ D V +I + G+L+ + + G +
Sbjct: 248 MELLRKMEERNIKL----DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 231 LINMYSRCGSIDRSVKVFEEMPHR----NVVTWTSLITGLAVHGRSREALRAFRDMREAG 286
LI + G D K+ +M R NVVT++ LI G+ REA + ++M + G
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 287 LRPDGAAYTAALVACSHGGLVEDGWRVFESMRSEYGVYPMLEHYGCMVDLLGRAGMLLEA 346
+ P+ Y + + +E+ ++ + M S+ G P + + +++ +A + +
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK-GCDPDIMTFNILINGYCKANRIDDG 422
Query: 347 FKFVEDMPIK---PNSVIWRTLLGACVNHNDLVLAEK 380
+ +M ++ N+V + TL+ L +A+K
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459