Miyakogusa Predicted Gene
- Lj1g3v1376630.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1376630.1 tr|A4S2T1|A4S2T1_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_94724,31.46,2e-18,ZINC FINGER, CCHC DOMAIN CONTAINING
11,NULL; POLY(A) POLYMERASE CID (PAP)-RELATED,NULL; seg,NULL;
Nu,CUFF.27242.1
(272 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G45750.1 | Symbols: | Nucleotidyltransferase family protein ... 210 8e-55
AT3G45760.1 | Symbols: | Nucleotidyltransferase family protein ... 183 1e-46
AT3G45760.2 | Symbols: | Nucleotidyltransferase family protein ... 173 1e-43
AT3G45750.2 | Symbols: | Nucleotidyltransferase family protein ... 156 1e-38
AT2G39740.1 | Symbols: | Nucleotidyltransferase family protein ... 117 8e-27
AT2G45620.1 | Symbols: | Nucleotidyltransferase family protein ... 80 2e-15
>AT3G45750.1 | Symbols: | Nucleotidyltransferase family protein |
chr3:16793855-16797380 REVERSE LENGTH=682
Length = 682
Score = 210 bits (535), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 110/218 (50%), Positives = 142/218 (65%), Gaps = 2/218 (0%)
Query: 50 VIGLDGLLCDTYARMCPKPIDYFNRRDLVRIFNLMTKEIYGNGY-NTPVVEGYGSFVMDM 108
++ LD +L D Y P DY R++LV+ N M +IYG ++PV+E YGSFVMDM
Sbjct: 40 LLDLDKVLNDVYCSFRPVSADYNTRKELVKNLNTMALDIYGKSEESSPVLEAYGSFVMDM 99
Query: 109 FTDESDLDLSINF-HDPSEFSRTKKIKTLQRFKNKLHSLERLEHVTGIQAILVATVPIVK 167
++ +SDLD+SINF + SE R KK++ L+RF KL SL+ V +++I A VPIVK
Sbjct: 100 YSSQSDLDVSINFGNGTSEIPREKKLEILKRFAKKLRSLQGEGQVKNVESIFSAKVPIVK 159
Query: 168 VIDKGTGIECDLSVNNWDGXXXXXXXXXXXXXDERFRKLCFLMKSWAKAHDINSSKDGTL 227
D+GTG+ECDLSV N DG D RF+KLC L+K WAKAH++NS+ TL
Sbjct: 160 FSDQGTGVECDLSVENKDGILNSQIVRIISQIDGRFQKLCLLVKHWAKAHEVNSALHRTL 219
Query: 228 NSLSIVLFVAFHLQTCNPPILPPFSILLKGKVSDSNTE 265
NS+SI L VA HLQT NPPILPPFS+LLK + N E
Sbjct: 220 NSVSITLLVALHLQTQNPPILPPFSMLLKDGMDPPNVE 257
>AT3G45760.1 | Symbols: | Nucleotidyltransferase family protein |
chr3:16801996-16804759 REVERSE LENGTH=474
Length = 474
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 126/199 (63%), Gaps = 2/199 (1%)
Query: 60 TYARMCPKPIDYFNRRDLVRIFNLMTKEIYGNGY-NTPVVEGYGSFVMDMFTDESDLDLS 118
Y+ P DY R++LV+ N M +I+G ++PV+E YGSF M+ F+ + DLD+S
Sbjct: 50 AYSSFRPVSADYNTRKELVKNLNAMAIDIFGKSEESSPVLEAYGSFAMNTFSSQKDLDVS 109
Query: 119 INFHD-PSEFSRTKKIKTLQRFKNKLHSLERLEHVTGIQAILVATVPIVKVIDKGTGIEC 177
INF SEF R KK++ L RF KL SLE V + IL A VPIV+ D+GTGIEC
Sbjct: 110 INFSSGTSEFYREKKLEILTRFATKLRSLEGQGFVRNVVPILSARVPIVRFCDQGTGIEC 169
Query: 178 DLSVNNWDGXXXXXXXXXXXXXDERFRKLCFLMKSWAKAHDINSSKDGTLNSLSIVLFVA 237
DL+V + DG D+RF+KLC L+K WA+AH +N++ TLNS+SI + VA
Sbjct: 170 DLTVESKDGILTSQIIRIISQIDDRFQKLCLLIKHWARAHGVNNASHNTLNSISITMLVA 229
Query: 238 FHLQTCNPPILPPFSILLK 256
HLQT +PPILPPFS L K
Sbjct: 230 HHLQTQSPPILPPFSTLFK 248
>AT3G45760.2 | Symbols: | Nucleotidyltransferase family protein |
chr3:16802253-16804759 REVERSE LENGTH=447
Length = 447
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 126/214 (58%), Gaps = 17/214 (7%)
Query: 60 TYARMCPKPIDYFNRRDLVRIFNLMTKEIYGNGY-NTPVVEGYGSFVMDMFTDESDLDLS 118
Y+ P DY R++LV+ N M +I+G ++PV+E YGSF M+ F+ + DLD+S
Sbjct: 50 AYSSFRPVSADYNTRKELVKNLNAMAIDIFGKSEESSPVLEAYGSFAMNTFSSQKDLDVS 109
Query: 119 INFHD-PSEFSRTKKIKTLQRFKNKLHSLERLEHVTGIQAILVATVPIVKVIDKGTGIEC 177
INF SEF R KK++ L RF KL SLE V + IL A VPIV+ D+GTGIEC
Sbjct: 110 INFSSGTSEFYREKKLEILTRFATKLRSLEGQGFVRNVVPILSARVPIVRFCDQGTGIEC 169
Query: 178 DLSVNNWDGXXXXXXXXXXXXXDERFRKLCFL---------------MKSWAKAHDINSS 222
DL+V + DG D+RF+KLC L +K WA+AH +N++
Sbjct: 170 DLTVESKDGILTSQIIRIISQIDDRFQKLCLLHCQLFSTNVNIVICQIKHWARAHGVNNA 229
Query: 223 KDGTLNSLSIVLFVAFHLQTCNPPILPPFSILLK 256
TLNS+SI + VA HLQT +PPILPPFS L K
Sbjct: 230 SHNTLNSISITMLVAHHLQTQSPPILPPFSTLFK 263
>AT3G45750.2 | Symbols: | Nucleotidyltransferase family protein |
chr3:16793855-16796913 REVERSE LENGTH=614
Length = 614
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 109/189 (57%), Gaps = 29/189 (15%)
Query: 106 MDMFTDESDLDLSINF-HDPSEFSRTKKIKTLQRFKNKLHSLE----------------- 147
MDM++ +SDLD+SINF + SE R KK++ L+RF KL SL+
Sbjct: 1 MDMYSSQSDLDVSINFGNGTSEIPREKKLEILKRFAKKLRSLQGKIFVPFFLLLSCMPIP 60
Query: 148 -----------RLEHVTGIQAILVATVPIVKVIDKGTGIECDLSVNNWDGXXXXXXXXXX 196
R V +++I A VPIVK D+GTG+ECDLSV N DG
Sbjct: 61 LLFSIYTKNPNREGQVKNVESIFSAKVPIVKFSDQGTGVECDLSVENKDGILNSQIVRII 120
Query: 197 XXXDERFRKLCFLMKSWAKAHDINSSKDGTLNSLSIVLFVAFHLQTCNPPILPPFSILLK 256
D RF+KLC L+K WAKAH++NS+ TLNS+SI L VA HLQT NPPILPPFS+LLK
Sbjct: 121 SQIDGRFQKLCLLVKHWAKAHEVNSALHRTLNSVSITLLVALHLQTQNPPILPPFSMLLK 180
Query: 257 GKVSDSNTE 265
+ N E
Sbjct: 181 DGMDPPNVE 189
>AT2G39740.1 | Symbols: | Nucleotidyltransferase family protein |
chr2:16576250-16578704 FORWARD LENGTH=511
Length = 511
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 92/171 (53%), Gaps = 12/171 (7%)
Query: 97 VVEGYGSFVMDMFTDESDLDLSINFHDPSE--FSRTKKIKTLQRFKNKLHSLERLEHVTG 154
V+ +GSFV ++FT DLD+S++ S F+ K+ +TL L L R +G
Sbjct: 49 TVQPFGSFVSNLFTRWGDLDISVDLFSGSSILFTGKKQKQTL------LGHLLRALRASG 102
Query: 155 I----QAILVATVPIVKVIDKGTGIECDLSVNNWDGXXXXXXXXXXXXXDERFRKLCFLM 210
+ Q ++ A VPI+KV+ I CD+S++N DG D RFR L L+
Sbjct: 103 LWYKLQFVIHARVPILKVVSGHQRISCDISIDNLDGLLKSRFLFWISEIDGRFRDLVLLV 162
Query: 211 KSWAKAHDINSSKDGTLNSLSIVLFVAFHLQTCNPPILPPFSILLKGKVSD 261
K WAKAH+IN SK GT NS S+ L V FH QTC P ILPP ++ D
Sbjct: 163 KEWAKAHNINDSKTGTFNSYSLSLLVIFHFQTCVPAILPPLRVIYPKSAVD 213
>AT2G45620.1 | Symbols: | Nucleotidyltransferase family protein |
chr2:18792943-18795750 FORWARD LENGTH=764
Length = 764
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 18/239 (7%)
Query: 12 KSTEQAQLAVDSTKQDLLKMAEKLESEILAKIKFIPTHVIGLDGLLCDTYARMCPKPIDY 71
K++ + + VD+ Q LL ++ +A I + D Y + P +
Sbjct: 397 KTSREKESRVDNRGQRLLGQKARMVKMYMACRNDIHRY----DATFIAIYKSLIPAEEEL 452
Query: 72 FNRRDLV-RIFNLMTKEIYGNGYNTPVVEGYGSFVMDMFTDESDLDLSINFHDPSEFSRT 130
+R L+ + NL+ KE + + YGS +SD+D+ + E
Sbjct: 453 EKQRQLMAHLENLVAKE-----WPHAKLYLYGSCANSFGFPKSDIDVCLAI----EGDDI 503
Query: 131 KKIKTLQRFKNKLHSLERLEHVTGIQAILVATVPIVKVIDKGTGIECDLSVNNWDGXXXX 190
K + L + L S +++ +QA+ A VPIVK++D TGI CD+ +NN
Sbjct: 504 NKSEMLLKLAEILES----DNLQNVQALTRARVPIVKLMDPVTGISCDICINNVLAVVNT 559
Query: 191 XXXXXXXXXDERFRKLCFLMKSWAKAHDINSSKDGTLNSLSIVLFVAFHLQTCNPPILP 249
D R R+L F++K WAK+ +N + GTL+S + VL LQ PPILP
Sbjct: 560 KLLRDYAQIDVRLRQLAFIVKHWAKSRRVNETYQGTLSSYAYVLMCIHFLQQRRPPILP 618