Miyakogusa Predicted Gene
- Lj1g3v1364450.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1364450.1 tr|Q7XRB6|Q7XRB6_ORYSJ OSJNBa0006B20.1 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0006B20.1
PE,30.45,1e-18,RCC1/BLIP-II,Regulator of chromosome
condensation/beta-lactamase-inhibitor protein II; no
descriptio,CUFF.27217.1
(420 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G08710.1 | Symbols: | Regulator of chromosome condensation (... 502 e-142
AT5G63860.1 | Symbols: UVR8 | Regulator of chromosome condensati... 177 2e-44
AT5G12350.1 | Symbols: | Regulator of chromosome condensation (... 138 7e-33
AT5G19420.1 | Symbols: | Regulator of chromosome condensation (... 138 8e-33
AT5G19420.2 | Symbols: | Regulator of chromosome condensation (... 138 9e-33
AT1G27060.1 | Symbols: | Regulator of chromosome condensation (... 130 1e-30
AT3G02510.1 | Symbols: | Regulator of chromosome condensation (... 119 4e-27
AT5G16040.1 | Symbols: | Regulator of chromosome condensation (... 118 9e-27
AT3G47660.1 | Symbols: | Regulator of chromosome condensation (... 116 4e-26
AT5G42140.1 | Symbols: | Regulator of chromosome condensation (... 114 1e-25
AT5G48330.2 | Symbols: | Regulator of chromosome condensation (... 112 7e-25
AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensat... 111 1e-24
AT5G48330.1 | Symbols: | Regulator of chromosome condensation (... 110 1e-24
AT3G55580.1 | Symbols: | Regulator of chromosome condensation (... 107 1e-23
AT5G60870.1 | Symbols: | Regulator of chromosome condensation (... 105 5e-23
AT4G14368.1 | Symbols: | Regulator of chromosome condensation (... 105 7e-23
AT3G26100.2 | Symbols: | Regulator of chromosome condensation (... 105 7e-23
AT3G26100.1 | Symbols: | Regulator of chromosome condensation (... 105 7e-23
AT3G15430.2 | Symbols: | Regulator of chromosome condensation (... 104 1e-22
AT3G15430.1 | Symbols: | Regulator of chromosome condensation (... 104 1e-22
AT3G23270.1 | Symbols: | Regulator of chromosome condensation (... 104 1e-22
AT3G02510.2 | Symbols: | Regulator of chromosome condensation (... 103 3e-22
AT1G69710.1 | Symbols: | Regulator of chromosome condensation (... 102 3e-22
AT1G65920.1 | Symbols: | Regulator of chromosome condensation (... 101 8e-22
AT3G53830.1 | Symbols: | Regulator of chromosome condensation (... 100 3e-21
AT5G60870.2 | Symbols: | Regulator of chromosome condensation (... 99 5e-21
AT5G11580.1 | Symbols: | Regulator of chromosome condensation (... 97 1e-20
AT3G03790.3 | Symbols: | ankyrin repeat family protein / regula... 95 9e-20
AT3G03790.2 | Symbols: | ankyrin repeat family protein / regula... 95 9e-20
AT3G03790.1 | Symbols: | ankyrin repeat family protein / regula... 94 2e-19
AT3G02300.1 | Symbols: | Regulator of chromosome condensation (... 84 2e-16
AT1G19880.1 | Symbols: | Regulator of chromosome condensation (... 79 5e-15
AT5G60870.3 | Symbols: | Regulator of chromosome condensation (... 73 4e-13
>AT5G08710.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:2834858-2837866 REVERSE
LENGTH=434
Length = 434
Score = 502 bits (1292), Expect = e-142, Method: Compositional matrix adjust.
Identities = 252/395 (63%), Positives = 316/395 (80%)
Query: 25 TRSSSTQPGKRFAALWGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLT 84
+R S++ GKRFAA+WG+GD+GRLGLG+L+SQW PAVCSA +HS A+ACGGAHTLFLT
Sbjct: 39 SRWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLT 98
Query: 85 DNGCVYAAGLNDCGQLGTSESVNYSLEPLQVLGHEKNIVHISAGYNHSCAVTVDGELYMW 144
+ V+A GLNDCGQLG S+ +++++PL+V G +K+I+HISAGY HS A+TVDGELYMW
Sbjct: 99 ETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYYHSAAITVDGELYMW 158
Query: 145 GKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSG 204
GKN++GQLGLGK+A +V +PTKVE L GITI+ ALG+EHS+ ++DGGE SWG G SG
Sbjct: 159 GKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSG 218
Query: 205 RLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGI 264
RLGHGH+SSL G ++ SE+TPRLI++LEGIKV VAAG+L SACTDENGS F+FGE+ I
Sbjct: 219 RLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSI 278
Query: 265 DKLCMKETSDATKPSLISKLPYSEEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPEA 324
+K+ +AT PS+IS++PY+EEV+CGGYHTCV+T GELYTWGSNENGCLG S
Sbjct: 279 NKMGFGGVRNATTPSIISEVPYAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYV 338
Query: 325 IHLPEKVQGPFMKSSVSQVSCGWKHTAAISEGRVFTWGWGGSNGTFSVDXXXXXXXXXXX 384
H P +V+GPF++S+VSQVSCGWKHTAAIS+ VFTWGWGGS+GTFSVD
Sbjct: 339 SHSPVRVEGPFLESTVSQVSCGWKHTAAISDNNVFTWGWGGSHGTFSVDGHSSGGQLGHG 398
Query: 385 XDVDYICPARVCFGEDVNALQVSCGFNHTGAILEY 419
DVDY PA V G++V A+ +SCGFNHT A+LE+
Sbjct: 399 SDVDYARPAMVDLGKNVRAVHISCGFNHTAAVLEH 433
>AT5G63860.1 | Symbols: UVR8 | Regulator of chromosome condensation
(RCC1) family protein | chr5:25554821-25558587 REVERSE
LENGTH=440
Length = 440
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 177/338 (52%), Gaps = 19/338 (5%)
Query: 40 WGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGC-VYAAGLNDCG 98
WG G+ G+LG G E + P SA H ++ CG HT+ + +G VY+ G D G
Sbjct: 39 WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98
Query: 99 QLGTSESVN-YSLEPLQVLGHEKNIVHISAGYNHSCAVTVDGELYMWGKNTNGQLGLGKR 157
+LG S + ++ P++ L H I I+ G +H AVT++GE+ WG+N NGQLGLG
Sbjct: 99 RLGHGNSSDLFTPLPIKAL-HGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157
Query: 158 APNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGHESSLLGF 217
++V P K++ +GI IKM A GAEH+ +++ G+ + WG G G LG G + L
Sbjct: 158 EDSLV--PQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRL-- 213
Query: 218 FKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGIDKLCMKETSDATK 277
P + G K+ VA G + +G+++ +G +L + D
Sbjct: 214 -------VPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266
Query: 278 PSLISKLPYS--EEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPEAIHLPEKVQGPF 335
P + L S ++S G HT LT+ G+LY WG N+ G +G+G+ P +V+ P
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPD 326
Query: 336 MKSSVSQVSCGWKHTAAISE-GRVFTWGWGGSNGTFSV 372
V QVSCGW+HT A++E VF WG G+NG +
Sbjct: 327 -DQKVVQVSCGWRHTLAVTERNNVFAWG-RGTNGQLGI 362
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 176/353 (49%), Gaps = 34/353 (9%)
Query: 73 IACGGAHTLFLTDNGCVYAAGLNDCGQLGTSESVNYSLEPLQVL---GHEKNIVHISAGY 129
I+ G +H++ L V + G + GQLG ++ + P Q+ GH+ IV ++ G
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP-SPTQLSALDGHQ--IVSVTCGA 76
Query: 130 NHSCAVTVDG-ELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLV 188
+H+ A + G E+Y WG G+LG G + LP K L GI IK A G H L
Sbjct: 77 DHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKA--LHGIRIKQIACGDSHCLA 134
Query: 189 ISDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSA 248
++ GE SWG +G+LG G T P+ I+ EGI++K VAAG +A
Sbjct: 135 VTMEGEVQSWGRNQNGQLGLG---------DTEDSLVPQKIQAFEGIRIKMVAAGAEHTA 185
Query: 249 CTDENGSVFIFGERGIDKLCMKETSDATKPSLISKL--PYSEEVSCGGYHTCVLTNSGEL 306
E+G ++ +G L + + +D P ++ V+CG HT ++ SG L
Sbjct: 186 AVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGAL 245
Query: 307 YTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAI-SEGRVFTWGWGG 365
YT+G ++ G LG G E +P K++ S +SQ+S GW+HT A+ S+G+++ WGW
Sbjct: 246 YTYGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGWN- 303
Query: 366 SNGTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDVNALQVSCGFNHTGAILE 418
G V ++D P +V F +D +QVSCG+ HT A+ E
Sbjct: 304 KFGQVGV-----------GNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 345
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 109/242 (45%), Gaps = 26/242 (10%)
Query: 176 IKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGI 235
+ + + GA HS+ + G SWG G G+LGHG +P + L+G
Sbjct: 17 VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG---------DAEDRPSPTQLSALDGH 67
Query: 236 KVKYVAAGMLSSACTDENG-SVFIFGERGIDKLCMKETSDATKPSLISKLP--YSEEVSC 292
++ V G + ++G V+ +G +L +SD P I L ++++C
Sbjct: 68 QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIAC 127
Query: 293 GGYHTCVLTNSGELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAA 352
G H +T GE+ +WG N+NG LG+G E +P+K+Q F + V+ G +HTAA
Sbjct: 128 GDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAAGAEHTAA 186
Query: 353 ISE-GRVFTWGWGGSNGTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDVNALQVSCGFN 411
++E G ++ WGWG D D + P RV V+CG+
Sbjct: 187 VTEDGDLYGWGWGRYGNLGLGDR------------TDRLVPERVTSTGGEKMSMVACGWR 234
Query: 412 HT 413
HT
Sbjct: 235 HT 236
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 45 HGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCGQLGTSE 104
+G+LG G LE P A N I+ G HT+ LT +G +Y G N GQ+G
Sbjct: 253 YGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGN 312
Query: 105 SVNYSLEPLQV-LGHEKNIVHISAGYNHSCAVTVDGELYMWGKNTNGQLGLGKRAPNIVH 163
+++ P+QV ++ +V +S G+ H+ AVT ++ WG+ TNGQLG+G+ +
Sbjct: 313 NLD-QCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDR--N 369
Query: 164 LPTKVEYL 171
P +E L
Sbjct: 370 FPKIIEAL 377
>AT5G12350.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:3995789-4000545 FORWARD LENGTH=1075
Length = 1075
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 167/365 (45%), Gaps = 46/365 (12%)
Query: 71 QAIACGGAHTLFLTDNGCVYAAGLNDCGQLGTSESVNYSLEPLQVLGHEKNIVHISAGYN 130
Q IACGG H + +T G ++ G G+LG N L + NI ++ G
Sbjct: 311 QNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEF 370
Query: 131 HSCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEY-LDGITIKMAALGAEHSLVI 189
HSCAVT+ G+LY WGK G LG G + V P +V + L+GI + A G H+ V+
Sbjct: 371 HSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWV--PKRVNFLLEGIHVSSIACGPYHTAVV 428
Query: 190 SDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSAC 249
+ G+ F++G G G LGHG + S+ + PR + L+G++ A G+ +A
Sbjct: 429 TSAGQLFTFGDGTFGVLGHGDKKSV---------FIPREVDSLKGLRTVRAACGVWHTAA 479
Query: 250 TDE------------NGSVFIFGERGIDKLCMKETSDATKPSLISKL--PYSEEVSCGGY 295
E +G +F +G+ +L P+ ++ L P +V+CG
Sbjct: 480 VVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHS 539
Query: 296 HTCVLTNSGELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAI-S 354
T LT SG +YT GS G LG + P +V+G KS V +++CG H A + S
Sbjct: 540 LTVALTTSGHVYTMGSPVYGQLGNSHADG-KTPNRVEGKLHKSFVEEIACGAYHVAVLTS 598
Query: 355 EGRVFTWGWGGSNGTF---SVDXXXXXXXXXXXXDVDYICPARVCFGEDVNALQVSCGFN 411
V+TWG GSNG VD D P V +D ++CG N
Sbjct: 599 RTEVYTWG-KGSNGRLGHGDVD--------------DRNSPTLVESLKDKQVKSIACGTN 643
Query: 412 HTGAI 416
T A+
Sbjct: 644 FTAAV 648
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 152/346 (43%), Gaps = 43/346 (12%)
Query: 30 TQPGKRFAALWGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCV 89
T+ G+ F+ WG GRLG G + +P + A + + +ACG H+ +T +G +
Sbjct: 324 TKQGESFS--WGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDL 381
Query: 90 YAAGLNDCGQLG--------TSESVNYSLEPLQVLGHEKNIVHISAGYNHSCAVTVDGEL 141
Y G D G LG + VN+ LE + V I+ G H+ VT G+L
Sbjct: 382 YTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSS-------IACGPYHTAVVTSAGQL 434
Query: 142 YMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISD---------- 191
+ +G T G LG G + V +P +V+ L G+ AA G H+ + +
Sbjct: 435 FTFGDGTFGVLGHGDKKS--VFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSN 492
Query: 192 --GGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSAC 249
G+ F+WG G GRLGHG++ L P + L VA G +
Sbjct: 493 CSSGKLFTWGDGDKGRLGHGNKEPKL---------VPTCVAALVEPNFCQVACGHSLTVA 543
Query: 250 TDENGSVFIFGERGIDKLCMKETSDATKPSLISKL--PYSEEVSCGGYHTCVLTNSGELY 307
+G V+ G +L T + KL + EE++CG YH VLT+ E+Y
Sbjct: 544 LTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVY 603
Query: 308 TWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAI 353
TWG NG LG G + + P V+ V ++CG TAA+
Sbjct: 604 TWGKGSNGRLGHGDVDDRNSPTLVES-LKDKQVKSIACGTNFTAAV 648
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 28/258 (10%)
Query: 121 NIVHISAGYNHSCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAA 180
++ +I+ G H+ VT GE + WG+ + G+LG G + + P ++ L+ I++ A
Sbjct: 309 DVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHG--VDSNIQQPKLIDALNTTNIELVA 366
Query: 181 LGAEHSLVISDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRD-LEGIKVKY 239
G HS ++ G+ ++WG G G LGHG+E S + P+ + LEGI V
Sbjct: 367 CGEFHSCAVTLSGDLYTWGKGDFGVLGHGNE---------VSHWVPKRVNFLLEGIHVSS 417
Query: 240 VAAGMLSSACTDENGSVFIFGERGIDKLCMKETSDATKPSLISKLP--YSEEVSCGGYHT 297
+A G +A G +F FG+ L + P + L + +CG +HT
Sbjct: 418 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHT 477
Query: 298 CVLTN------------SGELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSC 345
+ SG+L+TWG + G LG G+ E +P V ++ + QV+C
Sbjct: 478 AAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAA-LVEPNFCQVAC 536
Query: 346 GWKHTAAI-SEGRVFTWG 362
G T A+ + G V+T G
Sbjct: 537 GHSLTVALTTSGHVYTMG 554
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 164 LPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSE 223
LP +E + ++ A G +H+++++ GE+FSWG GRLGHG +S++
Sbjct: 298 LPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNI--------- 348
Query: 224 YTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGIDKLCMKETSDATKPSLISK 283
P+LI L ++ VA G S +G ++ +G+ L P ++
Sbjct: 349 QQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF 408
Query: 284 L---PYSEEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSV 340
L + ++CG YHT V+T++G+L+T+G G LG G +++ +P +V +V
Sbjct: 409 LLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTV 468
Query: 341 SQVSCGWKHTAAISE-------------GRVFTWGWG 364
+ +CG HTAA+ E G++FTWG G
Sbjct: 469 -RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG 504
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 226 PRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGIDKLCMKETSDATKPSLISKLP 285
P+ + + V+ +A G + + G F +GE +L S+ +P LI L
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358
Query: 286 YS--EEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQV 343
+ E V+CG +H+C +T SG+LYTWG + G LG G+ + +P++V VS +
Sbjct: 359 TTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSI 418
Query: 344 SCGWKHTAAI-SEGRVFTWGWGGSNGTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDVN 402
+CG HTA + S G++FT+G +GTF V +VD + + +
Sbjct: 419 ACGPYHTAVVTSAGQLFTFG----DGTFGVLGHGDKKSVFIPREVDSL--------KGLR 466
Query: 403 ALQVSCGFNHTGAILE 418
++ +CG HT A++E
Sbjct: 467 TVRAACGVWHTAAVVE 482
>AT5G19420.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:6547945-6552866 REVERSE LENGTH=1105
Length = 1105
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 167/363 (46%), Gaps = 42/363 (11%)
Query: 71 QAIACGGAHTLFLTDNGCVYAAGLNDCGQLGTSESVNYSLEPLQVLGHEKNIVHISAGYN 130
Q IACGG H + +T G ++ G G+LG N L + NI ++ G
Sbjct: 315 QNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEY 374
Query: 131 HSCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYL-DGITIKMAALGAEHSLVI 189
HSCAVT+ G+LY WGK G LG G + V P +V +L +GI + A G H+ V+
Sbjct: 375 HSCAVTLSGDLYTWGKGDFGILGHGNEVSHWV--PKRVNFLMEGIHVSSIACGPYHTAVV 432
Query: 190 SDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSAC 249
+ G+ F++G G G LGHG S+ + PR + L+G++ A G+ +A
Sbjct: 433 TSAGQLFTFGDGTFGVLGHGDRKSV---------FIPREVDSLKGLRTVRAACGVWHTAA 483
Query: 250 TDE------------NGSVFIFGERGIDKLCMKETSDATKPSLISKL--PYSEEVSCGGY 295
E +G +F +G+ +L + P+ ++ L P +V+CG
Sbjct: 484 VVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHS 543
Query: 296 HTCVLTNSGELYTWGSNENGCLGIGSPEAI-HLPEKVQGPFMKSSVSQVSCGWKHTAAI- 353
T LT SG +YT GS G L G+P A +P +V G KS V +++CG H A +
Sbjct: 544 LTVALTTSGHVYTMGSPVYGQL--GNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLT 601
Query: 354 SEGRVFTWGWGGSNGTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDVNALQVSCGFNHT 413
S V+TWG GSNG D P V +D ++CG N T
Sbjct: 602 SRTEVYTWG-KGSNGRLGHGDAD-----------DRNSPTLVESLKDKQVKSIACGSNFT 649
Query: 414 GAI 416
A+
Sbjct: 650 AAV 652
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 15/196 (7%)
Query: 226 PRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGIDKLCMKETSDATKPSLISKLP 285
P+ + + V+ +A G + + G F +GE +L S+ P LI L
Sbjct: 303 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 362
Query: 286 YS--EEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQV 343
+ E V+CG YH+C +T SG+LYTWG + G LG G+ + +P++V VS +
Sbjct: 363 TTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSI 422
Query: 344 SCGWKHTAAI-SEGRVFTWGWGGSNGTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDVN 402
+CG HTA + S G++FT+G +GTF V +VD + + +
Sbjct: 423 ACGPYHTAVVTSAGQLFTFG----DGTFGVLGHGDRKSVFIPREVDSL--------KGLR 470
Query: 403 ALQVSCGFNHTGAILE 418
++ +CG HT A++E
Sbjct: 471 TVRAACGVWHTAAVVE 486
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 33 GKRFAALWGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAA 92
GK F WG+GD RLG G E + P +A + + +ACG + T+ LT +G VY
Sbjct: 500 GKLFT--WGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTM 557
Query: 93 GLNDCGQLGTSESVNYSLEPLQVLG--HEKNIVHISAGYNHSCAVTVDGELYMWGKNTNG 150
G GQLG + P +V G H+ + I+ G H +T E+Y WGK +NG
Sbjct: 558 GSPVYGQLGNPHADGKV--PTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 615
Query: 151 QLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVI 189
+LG G + + PT VE L +K A G+ + +
Sbjct: 616 RLGHGD--ADDRNSPTLVESLKDKQVKSIACGSNFTAAV 652
>AT5G19420.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:6547945-6552981 REVERSE LENGTH=1139
Length = 1139
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 167/363 (46%), Gaps = 42/363 (11%)
Query: 71 QAIACGGAHTLFLTDNGCVYAAGLNDCGQLGTSESVNYSLEPLQVLGHEKNIVHISAGYN 130
Q IACGG H + +T G ++ G G+LG N L + NI ++ G
Sbjct: 349 QNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEY 408
Query: 131 HSCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYL-DGITIKMAALGAEHSLVI 189
HSCAVT+ G+LY WGK G LG G + V P +V +L +GI + A G H+ V+
Sbjct: 409 HSCAVTLSGDLYTWGKGDFGILGHGNEVSHWV--PKRVNFLMEGIHVSSIACGPYHTAVV 466
Query: 190 SDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSAC 249
+ G+ F++G G G LGHG S+ + PR + L+G++ A G+ +A
Sbjct: 467 TSAGQLFTFGDGTFGVLGHGDRKSV---------FIPREVDSLKGLRTVRAACGVWHTAA 517
Query: 250 TDE------------NGSVFIFGERGIDKLCMKETSDATKPSLISKL--PYSEEVSCGGY 295
E +G +F +G+ +L + P+ ++ L P +V+CG
Sbjct: 518 VVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHS 577
Query: 296 HTCVLTNSGELYTWGSNENGCLGIGSPEAI-HLPEKVQGPFMKSSVSQVSCGWKHTAAI- 353
T LT SG +YT GS G L G+P A +P +V G KS V +++CG H A +
Sbjct: 578 LTVALTTSGHVYTMGSPVYGQL--GNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLT 635
Query: 354 SEGRVFTWGWGGSNGTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDVNALQVSCGFNHT 413
S V+TWG GSNG D P V +D ++CG N T
Sbjct: 636 SRTEVYTWG-KGSNGRLGHGDAD-----------DRNSPTLVESLKDKQVKSIACGSNFT 683
Query: 414 GAI 416
A+
Sbjct: 684 AAV 686
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 15/196 (7%)
Query: 226 PRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGIDKLCMKETSDATKPSLISKLP 285
P+ + + V+ +A G + + G F +GE +L S+ P LI L
Sbjct: 337 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 396
Query: 286 YS--EEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQV 343
+ E V+CG YH+C +T SG+LYTWG + G LG G+ + +P++V VS +
Sbjct: 397 TTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSI 456
Query: 344 SCGWKHTAAI-SEGRVFTWGWGGSNGTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDVN 402
+CG HTA + S G++FT+G +GTF V +VD + + +
Sbjct: 457 ACGPYHTAVVTSAGQLFTFG----DGTFGVLGHGDRKSVFIPREVDSL--------KGLR 504
Query: 403 ALQVSCGFNHTGAILE 418
++ +CG HT A++E
Sbjct: 505 TVRAACGVWHTAAVVE 520
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 33 GKRFAALWGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAA 92
GK F WG+GD RLG G E + P +A + + +ACG + T+ LT +G VY
Sbjct: 534 GKLFT--WGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTM 591
Query: 93 GLNDCGQLGTSESVNYSLEPLQVLG--HEKNIVHISAGYNHSCAVTVDGELYMWGKNTNG 150
G GQLG + P +V G H+ + I+ G H +T E+Y WGK +NG
Sbjct: 592 GSPVYGQLGNPHADGKV--PTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 649
Query: 151 QLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVI 189
+LG G + + PT VE L +K A G+ + +
Sbjct: 650 RLGHGD--ADDRNSPTLVESLKDKQVKSIACGSNFTAAV 686
>AT1G27060.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr1:9395023-9396673 FORWARD
LENGTH=386
Length = 386
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 161/331 (48%), Gaps = 24/331 (7%)
Query: 40 WGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCGQ 99
WG G G+LG L+ + P + S S +ACGGAH + LT G V+ G GQ
Sbjct: 20 WGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSGQ 79
Query: 100 LGTSESVNYSLEPLQVLGHEKNIVHISAGYNHSCAVTVDGELYMWGKNTNGQLGLGKRAP 159
LG + +N +L L + I +AG++HS V+ G ++ G + GQLG G
Sbjct: 80 LGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLS 139
Query: 160 NIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGHESSLLGFFK 219
+ P KV + + ++KM A G HSLV+ G + +G G G+LG + +
Sbjct: 140 --LSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSD-------R 190
Query: 220 TYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGIDKLCMKETSDATKPS 279
S P ++ L+ ++V ++A SA +G F +G RG C A + S
Sbjct: 191 IKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWG-RG---FCGGPDVHAPQ-S 245
Query: 280 LISKLPYSEEVSCGGYHTCVLTNSGELYTWGSN-----ENGCLGIGSPEAIHLPEKVQGP 334
L S L + EV+ G H +LT GE++ GS E L I S EA+ EKV
Sbjct: 246 LPSPLSF-REVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALF--EKVP-D 301
Query: 335 FMKSSVSQVSCGWKHTAAISE-GRVFTWGWG 364
F V Q++ G +H+AA++E G V TWGWG
Sbjct: 302 FDGVKVMQIAAGAEHSAAVTENGEVKTWGWG 332
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 141/335 (42%), Gaps = 34/335 (10%)
Query: 89 VYAAGLNDCGQLGTSESVNYSLEPLQVLGHEKNIVHISAGYNHSCAVTVDGELYMWGKNT 148
V++ G GQLGT++ + L L L +I ++ G H A+T G+++ WG+ +
Sbjct: 17 VWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGS 76
Query: 149 NGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGH 208
+GQLG G NI LP V + D I AA G HS +SD G F+ G G G+LGH
Sbjct: 77 SGQLGHGDIL-NIT-LPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGH 134
Query: 209 GHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSV--FIFGERGIDK 266
G T S TP + VK VA GM S V F G+RG
Sbjct: 135 G---------DTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLG 185
Query: 267 LCMKETSDATKPSLISKLPYSE--EVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPEA 324
P ++S L E +S G H+ ++ G+ ++WG C G P+
Sbjct: 186 FSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWG--RGFC---GGPD- 239
Query: 325 IHLPEKVQGPFMKSSVSQVSCGWKHTAAIS-EGRVFTWGWGGSNGTFSVDXXXXXXXXXX 383
+H P+ + P S +V+ GW H ++ +G VF G
Sbjct: 240 VHAPQSLPSPL---SFREVAVGWNHALLLTVDGEVFKLG---------STLNKQPEKQQL 287
Query: 384 XXDVDYICPARVCFGEDVNALQVSCGFNHTGAILE 418
D +V + V +Q++ G H+ A+ E
Sbjct: 288 QIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTE 322
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 143/331 (43%), Gaps = 26/331 (7%)
Query: 30 TQPGKRFAALWGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCV 89
T GK F WG G G+LG G + + P + S F + A G +H+ F++D+GC+
Sbjct: 64 TSGGKVFT--WGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCI 121
Query: 90 YAAGLNDCGQLGTSESVNYSLEPLQVLGHEKNIVHISAGYNHSCAVTVDGELYMWGKNTN 149
+ G GQLG ++++ S + ++ ++ G HS + ++ +G
Sbjct: 122 FTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKR 181
Query: 150 GQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHG 209
GQLG V+LP V L + + + +HS IS G+ FSWG G G
Sbjct: 182 GQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCGGPDVH 241
Query: 210 HESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGIDKLCM 269
SL +P R+ VA G + +G VF G +
Sbjct: 242 APQSL---------PSPLSFRE--------VAVGWNHALLLTVDGEVFKLGSTLNKQPEK 284
Query: 270 KETSDATKPSLISKLPYSE-----EVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPEA 324
++ + +L K+P + +++ G H+ +T +GE+ TWG E+G LG+G+
Sbjct: 285 QQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTND 344
Query: 325 IHLPEKVQ--GPFMKSSVSQVSCGWKHTAAI 353
PE V +++ +V CG T A+
Sbjct: 345 QTSPELVSLGSIDLRTKEIKVYCGSGFTYAV 375
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 111/230 (48%), Gaps = 17/230 (7%)
Query: 140 ELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWG 199
+++ WG T+GQLG K + LP + +I M A G H + ++ GG+ F+WG
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDEL--LPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWG 73
Query: 200 MGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIF 259
G SG+LGHG + P+L+ + + AAG S ++G +F
Sbjct: 74 RGSSGQLGHG---------DILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTC 124
Query: 260 GERGIDKLCMKETSDATKPSLISKLPYS--EEVSCGGYHTCVLTNSGELYTWGSNENGCL 317
G +L +T + P+ +S + V+CG H+ VL ++ +GS + G L
Sbjct: 125 GNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQL 184
Query: 318 GIGSP--EAIHLPEKVQGPFMKSSVSQVSCGWKHTAAIS-EGRVFTWGWG 364
G S ++++LP V G V ++S H+AAIS +G+ F+WG G
Sbjct: 185 GFSSDRIKSVNLPCVVSG-LKDVEVVRISANGDHSAAISADGQFFSWGRG 233
>AT3G02510.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:522086-524536 REVERSE
LENGTH=393
Length = 393
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 162/339 (47%), Gaps = 33/339 (9%)
Query: 40 WGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCGQ 99
WG+G+ G+LG+G+ E + V A +S +++ G ++L + D+G ++ G N G
Sbjct: 10 WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69
Query: 100 LGTSESVNYSLEPLQV--LGHEKNIVHISAGYNHSCAVTVDGELYMWGKNTNGQLG---- 153
LG P +V L + K I + G H AV G Y WG N GQ G
Sbjct: 70 LGHQPETKTENIPSRVKALANVK-ITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPL 128
Query: 154 ---LGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGH 210
+G+ + +P + +T++ A G HS+V++ G ++WG
Sbjct: 129 KDEMGRPVRRDIVIPKRC--APKLTVRQVAAGGTHSVVLTREGHVWTWG----------- 175
Query: 211 ESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGIDKLCMK 270
+ G K S P ++ LE V+ +A G + +E+G + +G +L
Sbjct: 176 QPWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTG 231
Query: 271 ETSDATKPSLISKLPYSE--EVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPE--AIH 326
+T + P + L +++ GG+H+ LT+ GE+Y WG E+G LG+G + +
Sbjct: 232 DTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKM 291
Query: 327 LPEKVQGPFMKSSVSQVSCGWKHTAAIS-EGRVFTWGWG 364
+P+KV + + QVSCG H+ A++ +GR+F++G G
Sbjct: 292 VPQKVN-LLAEEDIIQVSCGGTHSVALTRDGRIFSFGRG 329
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 144/335 (42%), Gaps = 31/335 (9%)
Query: 89 VYAAGLNDCGQLG--TSESVNYS-----LEPLQVLGHEKNIVHISAGYNHSCAVTVDGEL 141
+ A G + GQLG T+E ++ LEP V +++V +G +S A+ DG +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSV----RSVV---SGSRNSLAICDDGTM 59
Query: 142 YMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMG 201
+ WG N G LG + ++P++V+ L + I AA+G H L + D G A++WG
Sbjct: 60 FTWGWNQRGTLGH-QPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGN 118
Query: 202 VSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGE 261
G+ G +G P+ R + V+ VAAG S G V+ +G+
Sbjct: 119 EYGQCGEEPLKDEMGRPVRRDIVIPK--RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176
Query: 262 RGIDKLCMKETSDATKPSLISKLPYSEEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGS 321
+ + P + L ++ G +H L G L WG+NE G LG G
Sbjct: 177 ----PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232
Query: 322 PEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAISEGRVFTWGWGGSNGTFSVDXXXXXXXX 381
+ P VQG + V + GW TA +G V+ WG G +G +
Sbjct: 233 TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWG-RGEHGRLGLGDNDKSSK- 290
Query: 382 XXXXDVDYICPARVCFGEDVNALQVSCGFNHTGAI 416
+ P +V + + +QVSCG H+ A+
Sbjct: 291 --------MVPQKVNLLAEEDIIQVSCGGTHSVAL 317
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 79/140 (56%), Gaps = 2/140 (1%)
Query: 73 IACGGAHTLFLTDNGCVYAAGLNDCGQLGTSESVNYSLEPLQVLGHEK-NIVHISAGYNH 131
IA G H L L ++G + A G N+ GQLGT ++ S P+ V G + +V I+AG H
Sbjct: 201 IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTS-HPVPVQGLDDLTLVDIAAGGWH 259
Query: 132 SCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISD 191
S A+T GE+Y WG+ +G+LGLG + +P KV L I + G HS+ ++
Sbjct: 260 STALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTR 319
Query: 192 GGEAFSWGMGVSGRLGHGHE 211
G FS+G G GRLG+G +
Sbjct: 320 DGRIFSFGRGDHGRLGYGRK 339
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 16/166 (9%)
Query: 40 WGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCGQ 99
WGN ++G+LG G + P + + IA GG H+ LTD G VY G + G+
Sbjct: 220 WGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGR 279
Query: 100 LGTSESVNYS-LEPLQV-LGHEKNIVHISAGYNHSCAVTVDGELYMWGKNTNGQLGLGKR 157
LG ++ S + P +V L E++I+ +S G HS A+T DG ++ +G+ +G+LG G++
Sbjct: 280 LGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRK 339
Query: 158 AP--NIVHLPTKVEYLDG------------ITIKMAALGAEHSLVI 189
+ LP K+ +G + K A G H+L I
Sbjct: 340 VTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGRHTLAI 385
>AT5G16040.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:5240860-5243308 REVERSE
LENGTH=396
Length = 396
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 161/339 (47%), Gaps = 33/339 (9%)
Query: 40 WGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCGQ 99
WG+G+ G+LGLG+ E + +V A + +++ G ++L + D+G ++ G N G
Sbjct: 10 WGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69
Query: 100 LGTSESVNYSLEP--LQVLGHEKNIVHISAGYNHSCAVTVDGELYMWGKNTNGQLG---- 153
LG P ++ L + K IV + G H AV G Y WG N GQ G
Sbjct: 70 LGHPPETKTESTPSLVKSLANVK-IVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPS 128
Query: 154 ---LGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGH 210
G+ + +P + +T++ A G HS+V++ G ++WG
Sbjct: 129 KDETGRPVRRDIVIPKRCAQQ--LTVRQVAAGGTHSVVLTREGYVWTWG----------- 175
Query: 211 ESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGIDKLCMK 270
+ G K S P ++ LE V+ +A G + E+G+++ +G +L
Sbjct: 176 QPWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTG 231
Query: 271 ETSDATKPSLISKLPYSE--EVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPE--AIH 326
+T + P + L +++ GG+H+ LTN GE+Y WG E+G LG G + +
Sbjct: 232 DTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKM 291
Query: 327 LPEKVQGPFMKSSVSQVSCGWKHTAAIS-EGRVFTWGWG 364
LP+KV + QVSCG H+ A++ +GR+F++G G
Sbjct: 292 LPQKVN-LLAGEDIIQVSCGGTHSVALTRDGRIFSFGRG 329
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 141/337 (41%), Gaps = 35/337 (10%)
Query: 89 VYAAGLNDCGQLG--TSE-----SVNYSLEPLQVLGHEKNIVHISAGYNHSCAVTVDGEL 141
V A G + GQLG T E SV +LEP N+ + G +S A+ DG+L
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPF-------NVRSVVGGSRNSLAICDDGKL 59
Query: 142 YMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMG 201
+ WG N G LG P+ V+ L + I AA+G H L + D G A++WG
Sbjct: 60 FTWGWNQRGTLGHPPET-KTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGN 118
Query: 202 VSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGE 261
G+ G G P+ R + + V+ VAAG S G V+ +G+
Sbjct: 119 EYGQCGEEPSKDETGRPVRRDIVIPK--RCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ 176
Query: 262 RGIDKLCMKETSDATKPSLISKLPYSEEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGS 321
+ + P + L ++ G +H L G L+ WG+NE G LG G
Sbjct: 177 ----PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232
Query: 322 PEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAISEGRVFTWGWGGSNGTFSVDXXXXXXXX 381
+ P VQG + V + GW TA +EG V+ WG G +G
Sbjct: 233 TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWG-RGEHGRLGFGDNDKSSK- 290
Query: 382 XXXXDVDYICPARVCF--GEDVNALQVSCGFNHTGAI 416
+ P +V GED+ +QVSCG H+ A+
Sbjct: 291 --------MLPQKVNLLAGEDI--IQVSCGGTHSVAL 317
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 156/352 (44%), Gaps = 50/352 (14%)
Query: 33 GKRFAALWGNGDHGRLG-LGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYA 91
GK F WG G LG +++ P++ + N A GG H L + D G YA
Sbjct: 57 GKLFT--WGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYA 114
Query: 92 AGLNDCGQLGTSESVNYSLEPL-------QVLGHEKNIVHISAGYNHSCAVTVDGELYMW 144
G N+ GQ G S + + P+ + + + ++AG HS +T +G ++ W
Sbjct: 115 WGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTW 174
Query: 145 GKN-TNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVS 203
G+ G + + +P +V+ L+ +++ A+GA H+L + + G ++WG
Sbjct: 175 GQPWPPGDI-------KQISVPVRVQGLE--NVRLIAVGAFHNLALKEDGTLWAWGNNEY 225
Query: 204 GRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERG 263
G+LG G T P ++ L+ + + +AAG S G V+ +G
Sbjct: 226 GQLGTG---------DTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGE 276
Query: 264 IDKLCMKETSDATK--PSLISKLPYSE--EVSCGGYHTCVLTNSGELYTWGSNENGCLGI 319
+L + ++K P ++ L + +VSCGG H+ LT G ++++G ++G LG
Sbjct: 277 HGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGY 336
Query: 320 GSPEA--------IHLPEKVQGPFMKSS--------VSQVSCGWKHTAAISE 355
G IH+P +G F + V+CG +HT AI E
Sbjct: 337 GRKVTTGQPLELPIHIPPP-EGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387
>AT3G47660.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:17571192-17574805 FORWARD
LENGTH=954
Length = 954
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 155/339 (45%), Gaps = 37/339 (10%)
Query: 30 TQPGKRFAALWGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCV 89
T+ G+ ++ WG GRLG G P + F + + CG HT +T +G +
Sbjct: 315 TKQGQMYS--WGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDL 372
Query: 90 YAAGLND--CGQLGTSESVNYSLEPLQVLGHEKNIV--HISAGYNHSCAVTVDGELYMWG 145
YA G D G LG ++ +P+++LG + I IS G H+ VT +G+L+ +G
Sbjct: 373 YAWGDGDHNAGLLGLGSGASH-WKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFG 431
Query: 146 KNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSL-VISDGGEA------FSW 198
T G LG G R ++P +VE L+G AA G HS V+S GEA F+W
Sbjct: 432 DGTFGALGHGDRIS--TNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTW 489
Query: 199 GMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFI 258
G G GRLGHG L P + +L+ + VA G + +G V+
Sbjct: 490 GDGDDGRLGHGDIECRL---------IPSCVTELDTTSFQQVACGQSITVALSMSGQVYA 540
Query: 259 FGERGIDKLCMKETSDATK-PSLISK---LPYSEEVSCGGYHTCVLTNSGELYTWGSNEN 314
G + D + PS I + +EV+CG +H VL + E+YTWG N
Sbjct: 541 MG-------TADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSN 593
Query: 315 GCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAI 353
G LG G E +P V+ V +V CG +TA I
Sbjct: 594 GQLGHGDTEYRCMPTLVKA-LKGKQVRKVVCGSNYTATI 631
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 178/394 (45%), Gaps = 47/394 (11%)
Query: 39 LWGNGDHGRLGLGSLESQ-WRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDC 97
L G G H SL + + P V + + Q+I+CG + + +T G +Y+ G
Sbjct: 269 LLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESG 328
Query: 98 GQLGTSESVNYSLEPLQVLGHEKNIVHIS-AGYNHSCAVTVDGELYMWGK--NTNGQLGL 154
G+LG +Y P + + V ++ G H+CAVT G+LY WG + G LGL
Sbjct: 329 GRLGHG-VCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGL 387
Query: 155 GKRAPNIVHLPTKVE-YLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGHESS 213
G A + P ++ ++GI +K + G H+ ++ G+ F++G G G LGHG
Sbjct: 388 GSGASHWK--PVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDR-- 443
Query: 214 LLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACT-------DENGSVFIFGERGIDK 266
S PR + L G + A G+ SA +G +F +G+ +
Sbjct: 444 -------ISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGR 496
Query: 267 LCMKETSDATKPSLISKLPYS--EEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPEA 324
L + PS +++L + ++V+CG T L+ SG++Y G+ + S +
Sbjct: 497 LGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADP------SHDI 550
Query: 325 IHLPEKVQGPFMKSSVSQVSCGWKHTAAI-SEGRVFTWGWGGSNGTFSVDXXXXXXXXXX 383
+ P ++G KS V +V+CG+ H A + S+ V+TWG GSNG
Sbjct: 551 VRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWG-KGSNGQLG------------ 597
Query: 384 XXDVDYIC-PARVCFGEDVNALQVSCGFNHTGAI 416
D +Y C P V + +V CG N+T I
Sbjct: 598 HGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 631
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 29 STQPGKRFAALWGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGC 88
+T GK F WG+GD GRLG G +E + P+ + S Q +ACG + T+ L+ +G
Sbjct: 480 ATSSGKLFT--WGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQ 537
Query: 89 VYAAGLNDCGQLGTSESVNYSLEPLQVLG--HEKNIVHISAGYNHSCAVTVDGELYMWGK 146
VYA G D S + P + G + + ++ G++H + E+Y WGK
Sbjct: 538 VYAMGTAD-------PSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGK 590
Query: 147 NTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVI 189
+NGQLG G +PT V+ L G ++ G+ ++ I
Sbjct: 591 GSNGQLGHGDTEYRC--MPTLVKALKGKQVRKVVCGSNYTATI 631
>AT5G42140.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:16837547-16841640 REVERSE LENGTH=1073
Length = 1073
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 43/362 (11%)
Query: 73 IACGGAHTLFLTDNGCVYAAGLNDCGQLGTSESVNYSLEPLQVLGHEKNIVHISAGYNHS 132
IACG H ++ G V+ G G+LG + + L +I ++ G H+
Sbjct: 277 IACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHT 336
Query: 133 CAVTVDGELYMWGKNTNGQLGLGKRAPNIVH-LPTKVE-YLDGITIKMAALGAEHSLVIS 190
CAVT+ GE+Y WG T+ GL ++ H +P ++ L+G+ I + G H+ +I+
Sbjct: 337 CAVTMTGEIYTWGDGTHNA-GLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALIT 395
Query: 191 DGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACT 250
G+ F++G G G LGHG + ++ + PR + L G++ VA G+ +A
Sbjct: 396 STGQLFTFGDGTFGVLGHGDKETV---------FYPREVESLSGLRTIAVACGVWHAAAI 446
Query: 251 DE-----------NGSVFIFGERGIDKLCMKETSDATKPSLISKLPYS--EEVSCGGYHT 297
E +G +F +G+ +L + KP+ +S L V+CG T
Sbjct: 447 VEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLT 506
Query: 298 CVLTNSGELYTWGSNENGCLGIGSPEAI-HLPEKVQGPFMKSSVSQVSCGWKHTAAI-SE 355
LT SG++YT GS G LG +P A LP V+ K V +++CG H A + S
Sbjct: 507 VGLTTSGKVYTMGSTVYGQLG--NPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSR 564
Query: 356 GRVFTWGWGGSNGTFSVDXXXXXXXXXXXXDV-DYICPARVCFGEDVNALQVSCGFNHTG 414
VFTWG G+NG DV D P V ++ + ++CG N T
Sbjct: 565 NEVFTWG-KGANGRLG------------HGDVEDRKAPTLVDALKERHVKNIACGSNFTA 611
Query: 415 AI 416
AI
Sbjct: 612 AI 613
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 143/332 (43%), Gaps = 32/332 (9%)
Query: 40 WGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYA--AGLNDC 97
WG GRLG G + P + + S +ACG HT +T G +Y G ++
Sbjct: 296 WGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNA 355
Query: 98 GQLGTSESVNYSLEPLQVLGHEK--NIVHISAGYNHSCAVTVDGELYMWGKNTNGQLGLG 155
G LG V++ + P ++ G + I +S G H+ +T G+L+ +G T G LG G
Sbjct: 356 GLLGHGTDVSHWI-PKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHG 414
Query: 156 KRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISD-----------GGEAFSWGMGVSG 204
+ V P +VE L G+ A G H+ I + G+ F+WG G
Sbjct: 415 DK--ETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKS 472
Query: 205 RLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGI 264
RLGHG + L P + L VA G + +G V+ G
Sbjct: 473 RLGHGDKEPRL---------KPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVY 523
Query: 265 DKLCMKETSDATKPSLI-SKLPYS--EEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGS 321
+L +D P L+ KL EE++CG YH VLT+ E++TWG NG LG G
Sbjct: 524 GQLG-NPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGD 582
Query: 322 PEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAI 353
E P V + V ++CG TAAI
Sbjct: 583 VEDRKAPTLVDA-LKERHVKNIACGSNFTAAI 613
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 119/254 (46%), Gaps = 41/254 (16%)
Query: 139 GELYMWGK---------NTNGQLG-LGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLV 188
G++Y+WG+ + +G LG R+ V +P +E + + A G +H+ +
Sbjct: 229 GDVYIWGEVLCENVTKFGADKNIGYLGSRSD--VLIPKPLESNVVLDVHHIACGVKHAAL 286
Query: 189 ISDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSA 248
+S GE F+WG GRLGHG + G P+LI L + +VA G +
Sbjct: 287 VSRQGEVFTWGEASGGRLGHGMGKDVTG---------PQLIESLAATSIDFVACGEFHTC 337
Query: 249 CTDENGSVFIFGERGIDKLCMKETSDATK--PSLISKLPYS----EEVSCGGYHTCVLTN 302
G ++ +G+ + + +D + P IS P VSCG +HT ++T+
Sbjct: 338 AVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISG-PLEGLQIASVSCGPWHTALITS 396
Query: 303 SGELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAISE------- 355
+G+L+T+G G LG G E + P +V+ +++ V+CG H AAI E
Sbjct: 397 TGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIA-VACGVWHAAAIVEVIVTHSS 455
Query: 356 -----GRVFTWGWG 364
G++FTWG G
Sbjct: 456 SSVSSGKLFTWGDG 469
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 33 GKRFAALWGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAA 92
GK F WG+GD RLG G E + +P SA ++H+ +ACG + T+ LT +G VY
Sbjct: 461 GKLFT--WGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTM 518
Query: 93 GLNDCGQLGTSESVNYSLEPLQVLGHEKNIV-HISAGYNHSCAVTVDGELYMWGKNTNGQ 151
G GQLG + + + L L K+ V I+ G H +T E++ WGK NG+
Sbjct: 519 GSTVYGQLG-NPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGR 577
Query: 152 LGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVI 189
LG G PT V+ L +K A G+ + I
Sbjct: 578 LGHGDVEDR--KAPTLVDALKERHVKNIACGSNFTAAI 613
>AT5G48330.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:19585989-19587729 FORWARD
LENGTH=454
Length = 454
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 203/466 (43%), Gaps = 76/466 (16%)
Query: 2 WRRSYLRLSELHRGASR-----LGLGFPTRSSSTQPGKRFAAL-WGNGDHGRLGLGSLE- 54
W + L++S+++ SR L G R ++ G+R + +G+G+ G LGL S
Sbjct: 5 WSIAKLQISKVYSSDSRFCTHVLFNGVVRRQFTSTSGERRTVMSFGDGNLGALGLSSSSI 64
Query: 55 -----SQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCGQLG--TSESVN 107
+ P V S L +I+ G H+L +T +G ++A G ND GQLG +S +
Sbjct: 65 PGMGMDAYEPTVVSN-LPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSRD 123
Query: 108 YSLEPLQVLGHEKNIVHISAGYNH---SCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHL 164
EP +V G E V++ A + S A+ DG L++WG++ GQLGLG +
Sbjct: 124 SRSEPKRVEGLEN--VNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIE-ARV 180
Query: 165 PTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGH---GHESSLLGFFKTY 221
P++VE L + +LG H+L ++ G+ F WG GR+G+ E+SLL
Sbjct: 181 PSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDG 240
Query: 222 S-------------------------------EYTPRLIRDLEGIKVKYVAAGMLSSACT 250
S + P L+ + KV +A G S
Sbjct: 241 SMKGHHAAGDLNLEAAEKKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLIL 300
Query: 251 DENGSVFIFGERGIDKLCMKETSDATKPSLISKLPYSEEVSCGGYHTCVLTNSGE--LYT 308
+G++ G +L + KP I++ P S ++ G H+ + N GE + +
Sbjct: 301 CHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITESPIS--IAAGLGHSLAICNRGERNILS 358
Query: 309 WGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAISEGRVFTWGWG-GSN 367
WG N + LG G PE +LP +V+G F S + VS G H+ ++E + W WG G N
Sbjct: 359 WGWNRSRQLGRGKPE--NLPREVEG-FDGESPASVSAGRVHSLCVTE-KGEAWVWGCGKN 414
Query: 368 GTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDVNALQVSCGFNHT 413
G + DV+ C LQ GF+H+
Sbjct: 415 GRLGLGSSSDEPEPMLLEDVEG------CV------LQAVAGFDHS 448
>AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:28906952-28911325 FORWARD LENGTH=1103
Length = 1103
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 170/362 (46%), Gaps = 41/362 (11%)
Query: 73 IACGGAHTLFLTDNGCVYAAGLNDCGQLGTSESVN-YSLEPLQVLGHEKNIVHISAGYNH 131
IACG H F+T G ++ G G+LG + + ++ L ++ ++ G H
Sbjct: 286 IACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFH 345
Query: 132 SCAVTVDGELYMWGKNTNGQLGLGKRAPNIVH-LPTKVE-YLDGITIKMAALGAEHSLVI 189
+CAVT+ GELY WG T+ +GL +I H +P ++ L+G+ + + G H+ +I
Sbjct: 346 TCAVTLAGELYTWGDGTHN-VGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALI 404
Query: 190 SDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSAC 249
+ G F++G G G LGHG + ++ +Y PR + L G++ V+ G+ +A
Sbjct: 405 TSYGRLFTFGDGTFGVLGHGDKETV--------QY-PREVESLSGLRTIAVSCGVWHTAA 455
Query: 250 TDE------------NGSVFIFGERGIDKLCMKETSDATKPSLISKL-PYS-EEVSCGGY 295
E +G +F +G+ ++L + KP+ + L Y+ +++CG
Sbjct: 456 VVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHS 515
Query: 296 HTCVLTNSGELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAI-S 354
T LT SG+++T GS G LG + LP V+ V ++SCG H AA+ S
Sbjct: 516 LTVGLTTSGQVFTMGSTVYGQLGNLQTDG-KLPCLVEDKLASEFVEEISCGAYHVAALTS 574
Query: 355 EGRVFTWGWGGSNGTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDVNALQVSCGFNHTG 414
V+TWG G+NG D P V +D + ++CG N+T
Sbjct: 575 RNEVYTWG-KGANGRLGHGDLE-----------DRKVPTIVEALKDRHVKYIACGSNYTA 622
Query: 415 AI 416
AI
Sbjct: 623 AI 624
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 152/344 (44%), Gaps = 36/344 (10%)
Query: 30 TQPGKRFAALWGNGDHGRLGLGSLESQWRPAVCSAFL-NHSPQAIACGGAHTLFLTDNGC 88
T+ G+ F WG GRLG G + + P + + S +ACG HT +T G
Sbjct: 297 TRQGEIFT--WGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGE 354
Query: 89 VYA--AGLNDCGQLGTSESVNYSLEPLQVLGHEK--NIVHISAGYNHSCAVTVDGELYMW 144
+Y G ++ G LG +++ + P ++ G + ++ +S G H+ +T G L+ +
Sbjct: 355 LYTWGDGTHNVGLLGHGSDISHWI-PKRIAGSLEGLHVASVSCGPWHTALITSYGRLFTF 413
Query: 145 GKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISD------------G 192
G T G LG G + V P +VE L G+ + G H+ + +
Sbjct: 414 GDGTFGVLGHGDK--ETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSS 471
Query: 193 GEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDE 252
G+ F+WG G RLGHG + L P + L +A G +
Sbjct: 472 GKLFTWGDGDKNRLGHGDKDPRL---------KPTCVPALIDYNFHKIACGHSLTVGLTT 522
Query: 253 NGSVFIFGERGIDKLCMKETSDATKPSLI-SKLP--YSEEVSCGGYHTCVLTNSGELYTW 309
+G VF G +L +T D P L+ KL + EE+SCG YH LT+ E+YTW
Sbjct: 523 SGQVFTMGSTVYGQLGNLQT-DGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTW 581
Query: 310 GSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAI 353
G NG LG G E +P V+ V ++CG +TAAI
Sbjct: 582 GKGANGRLGHGDLEDRKVPTIVEA-LKDRHVKYIACGSNYTAAI 624
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 37/256 (14%)
Query: 139 GELYMWGK---NTNGQLGLGKRAPNI-----VHLPTKVEYLDGITIKMAALGAEHSLVIS 190
G++Y+WG+ + ++G+ K A + V +P +E + + A G H+ ++
Sbjct: 238 GDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVLDVHQIACGVRHAAFVT 297
Query: 191 DGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGI-KVKYVAAGMLSSAC 249
GE F+WG GRLGHG + + PRL+ L V +VA G +
Sbjct: 298 RQGEIFTWGEESGGRLGHGIGKDV---------FHPRLVESLTATSSVDFVACGEFHTCA 348
Query: 250 TDENGSVFIFGERGIDKLCMKETSDATK--PSLIS---KLPYSEEVSCGGYHTCVLTNSG 304
G ++ +G+ + + SD + P I+ + + VSCG +HT ++T+ G
Sbjct: 349 VTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALITSYG 408
Query: 305 ELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAISE--------- 355
L+T+G G LG G E + P +V+ +++ VSCG HTAA+ E
Sbjct: 409 RLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIA-VSCGVWHTAAVVEIIVTQSNSS 467
Query: 356 ----GRVFTWGWGGSN 367
G++FTWG G N
Sbjct: 468 SVSSGKLFTWGDGDKN 483
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 93/190 (48%), Gaps = 18/190 (9%)
Query: 235 IKVKYVAAGMLSSACTDENGSVFIFGERGIDKLCMKETSDATKPSLISKLPYSEEV---S 291
+ V +A G+ +A G +F +GE +L D P L+ L + V +
Sbjct: 281 LDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVA 340
Query: 292 CGGYHTCVLTNSGELYTWG--SNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKH 349
CG +HTC +T +GELYTWG ++ G LG GS + +P+++ G V+ VSCG H
Sbjct: 341 CGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWH 400
Query: 350 TAAI-SEGRVFTWGWGGSNGTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDVNALQVSC 408
TA I S GR+FT+G +GTF V +V+ + R + VSC
Sbjct: 401 TALITSYGRLFTFG----DGTFGVLGHGDKETVQYPREVESLSGLRT--------IAVSC 448
Query: 409 GFNHTGAILE 418
G HT A++E
Sbjct: 449 GVWHTAAVVE 458
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 83/184 (45%), Gaps = 24/184 (13%)
Query: 250 TDENGSVFIFGER--------GIDK----LCMKETSDATKPSLISKLPYSEEVSCGGYHT 297
+D G V+I+GE GIDK L + KP + + +++CG H
Sbjct: 234 SDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVLDVHQIACGVRHA 293
Query: 298 CVLTNSGELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAIS-EG 356
+T GE++TWG G LG G + + P V+ SSV V+CG HT A++ G
Sbjct: 294 AFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAG 353
Query: 357 RVFTWGWGGSNGTFSVDXXXXXXXXXXXXDVDYICPARVCFG-EDVNALQVSCGFNHTGA 415
++TWG +GT +V D+ + P R+ E ++ VSCG HT
Sbjct: 354 ELYTWG----DGTHNV------GLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTAL 403
Query: 416 ILEY 419
I Y
Sbjct: 404 ITSY 407
>AT5G48330.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:19585989-19587729 FORWARD
LENGTH=455
Length = 455
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 202/467 (43%), Gaps = 77/467 (16%)
Query: 2 WRRSYLRLSELHRGASR-----LGLGFPTRSSSTQPGKRFAAL-WGNGDHGRLGLGSLE- 54
W + L++S+++ SR L G R ++ G+R + +G+G+ G LGL S
Sbjct: 5 WSIAKLQISKVYSSDSRFCTHVLFNGVVRRQFTSTSGERRTVMSFGDGNLGALGLSSSSI 64
Query: 55 -----SQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCGQLG---TSESV 106
+ P V S L +I+ G H+L +T +G ++A G ND GQLG S
Sbjct: 65 PGMGMDAYEPTVVSN-LPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSR 123
Query: 107 NYSLEPLQVLGHEKNIVHISAGYNH---SCAVTVDGELYMWGKNTNGQLGLGKRAPNIVH 163
+ EP +V G E V++ A + S A+ DG L++WG++ GQLGLG
Sbjct: 124 DSRSEPKRVEGLEN--VNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIE-AR 180
Query: 164 LPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGH---GHESSLLGFFKT 220
+P++VE L + +LG H+L ++ G+ F WG GR+G+ E+SLL
Sbjct: 181 VPSRVENLAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVGNVGLPLEASLLDSITD 240
Query: 221 YS-------------------------------EYTPRLIRDLEGIKVKYVAAGMLSSAC 249
S + P L+ + KV +A G S
Sbjct: 241 GSMKGHHAAGDLNLEAAEKKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLI 300
Query: 250 TDENGSVFIFGERGIDKLCMKETSDATKPSLISKLPYSEEVSCGGYHTCVLTNSGE--LY 307
+G++ G +L + KP I++ P S ++ G H+ + N GE +
Sbjct: 301 LCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITESPIS--IAAGLGHSLAICNRGERNIL 358
Query: 308 TWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAISEGRVFTWGWG-GS 366
+WG N + LG G PE +LP +V+G F S + VS G H+ ++E + W WG G
Sbjct: 359 SWGWNRSRQLGRGKPE--NLPREVEG-FDGESPASVSAGRVHSLCVTE-KGEAWVWGCGK 414
Query: 367 NGTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDVNALQVSCGFNHT 413
NG + DV+ C LQ GF+H+
Sbjct: 415 NGRLGLGSSSDEPEPMLLEDVEG------CV------LQAVAGFDHS 449
>AT3G55580.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:20612766-20615730 FORWARD
LENGTH=488
Length = 488
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 127/278 (45%), Gaps = 43/278 (15%)
Query: 103 SESVNYSLEPLQV-LGHEKNIVHISAGYNHSCAVTVDGELYMWGKNTNGQLGLGKRAPNI 161
S++++ S P V L IV ++AG H+ A++ G+++ WG GQLGLG R +
Sbjct: 216 SDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRV-RL 274
Query: 162 VHLPTKVEYLD------------------------GITIKMAALGAEHSLVISDGGEAFS 197
V P + ++ G +K A G HS VI+D G +
Sbjct: 275 VSSPHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLT 334
Query: 198 WGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVF 257
+G G+ G+ G G T E +P + L GI+++ VAAG+ + C +G V+
Sbjct: 335 FGWGLYGQCGQG---------STDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVY 385
Query: 258 IFGERGIDKLCMKETSDATKPSLISKLPYSEEV-----SCGGYHTCVLTNSGELYTWGSN 312
FG +L T P L+ + P E V SCG HT V+T+ G ++ WG N
Sbjct: 386 AFGGNQFGQLGTGCDQAETLPKLL-EAPNLENVNVKTISCGARHTAVITDEGRVFCWGWN 444
Query: 313 ENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHT 350
+ G LGIG + P +V+ ++CGW HT
Sbjct: 445 KYGQLGIGDVIDRNAPAEVR--IKDCFPKNIACGWWHT 480
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 127/276 (46%), Gaps = 37/276 (13%)
Query: 160 NIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGHESSLLGFF- 218
++ LP V G+ I A G H+L +SD G+ + WG G G+LG G L+
Sbjct: 220 DLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPH 279
Query: 219 -------KTYSEYTPRLIR--------DLEGIKVKYVAAGMLSSACTDENGSVFIFGERG 263
+Y + T + + G VK +A G SA + G++ FG
Sbjct: 280 PIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGL 339
Query: 264 IDKLCMKETSDATKPSLISKL--PYSEEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGS 321
+ T D P+ +S L EEV+ G +HT ++ G++Y +G N+ G LG G
Sbjct: 340 YGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGC 399
Query: 322 PEAIHLPEKVQGPFMKS-SVSQVSCGWKHTAAIS-EGRVFTWGWG--GSNGTFSVDXXXX 377
+A LP+ ++ P +++ +V +SCG +HTA I+ EGRVF WGW G G V
Sbjct: 400 DQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDV----- 454
Query: 378 XXXXXXXXDVDYICPARVCFGEDVNALQVSCGFNHT 413
+D PA V +D ++CG+ HT
Sbjct: 455 ---------IDRNAPAEVRI-KDCFPKNIACGWWHT 480
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 40 WGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCGQ 99
+G G +G+ G GS + + P S+ L + +A G HT + +G VYA G N GQ
Sbjct: 335 FGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQ 394
Query: 100 LGT----SESVNYSLEPLQVLGHEKNIVHISAGYNHSCAVTVDGELYMWGKNTNGQLGLG 155
LGT +E++ LE + N+ IS G H+ +T +G ++ WG N GQLG+G
Sbjct: 395 LGTGCDQAETLPKLLEAPNL--ENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIG 452
Query: 156 KRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVI 189
+ P +V D K A G H+L++
Sbjct: 453 DVIDR--NAPAEVRIKDCFP-KNIACGWWHTLLL 483
>AT5G60870.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487771 REVERSE
LENGTH=445
Length = 445
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 135/303 (44%), Gaps = 20/303 (6%)
Query: 39 LWGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCG 98
+WG GD GRLG G S + P + F HS + IA GG H++ LT G V+ G G
Sbjct: 123 IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 182
Query: 99 QLGTSESVNYSLEPLQVLGH-EKNIVHISAGYNHSCAVTVDGELYMWGKNTNGQLGLGKR 157
LG + L P +V + I I+ H+ A+T GELYMWG+
Sbjct: 183 ALG-HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 241
Query: 158 APNI-----VHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGHES 212
+ +P+KV+ L + + + G ++ ++ G+ ++WG + LG G
Sbjct: 242 GRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRG--- 297
Query: 213 SLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGIDKLCMKET 272
+ P + LEG+++ +A G S E G V +G G +L
Sbjct: 298 ------DNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSL 351
Query: 273 SDATKPSLISKLPYSEEV--SCGGYHTCVLTNSGELYTWGSNENGCLGI-GSPEAIHLPE 329
+ P+ I L + V + GG + +T+ GEL+ WG+ ++ LG+ G PE P
Sbjct: 352 RNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPV 411
Query: 330 KVQ 332
+V
Sbjct: 412 EVN 414
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 123/298 (41%), Gaps = 76/298 (25%)
Query: 140 ELYMWGKNTNGQLGLG------------------KRAPNIVHLPTKVEYLDGITIKMA-A 180
+L+ WG+ +GQLG G ++ ++ P +++ D + ++ +
Sbjct: 49 QLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDA-DSSSFRIGIS 107
Query: 181 LGAEHSLVISDGGEAFSWGMGVSGRLGHGHESSLL------------------------- 215
G HS + D G+ + WG G GRLG G E+S+
Sbjct: 108 CGLFHSGLTID-GDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVA 166
Query: 216 -------------GF----FKTYS-EYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVF 257
GF K Y+ E PR + D K+ +A +A E+G ++
Sbjct: 167 LTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELY 226
Query: 258 IFGERGID-------KLCMKETSDATKPSLISKLPYS-EEVSCGGYHTCVLTNSGELYTW 309
++G D E + PS + L VSCGG+ T LT G+L+ W
Sbjct: 227 MWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNW 286
Query: 310 GSNENGCLGIGSPEAIHLPEKVQGPFMKS-SVSQVSCGWKHTAAIS-EGRVFTWGWGG 365
G+N N LG G P V P ++ ++Q++CG H+ A++ EG+V +WG GG
Sbjct: 287 GANSNYELGRGDNLGGWEPMPV--PSLEGVRITQIACGGYHSLALTEEGKVLSWGHGG 342
>AT4G14368.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr4:8274279-8278810 REVERSE
LENGTH=1106
Length = 1106
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 150/341 (43%), Gaps = 33/341 (9%)
Query: 30 TQPGKRFAALWGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCV 89
T+ G+ F W GRLG G RP + + +ACG HT ++ +G +
Sbjct: 286 TRQGEVFT--WEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHTCAVSTSGDL 343
Query: 90 YA--AGLNDCGQLGTSESVNYSLEPLQVLGHEK--NIVHISAGYNHSCAVTVDGELYMWG 145
+ G+++ G LG +++ + P +V G + ++ ++ G HS T +G+L+ +G
Sbjct: 344 FTWGDGIHNVGLLGHGSDLSHWI-PKRVSGPVEGLQVLSVACGTWHSALATANGKLFTFG 402
Query: 146 KNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVI----------SDGGEA 195
G LG G R V P +V+ L G+ A G H++ I + +
Sbjct: 403 DGAFGVLGHGDRES--VSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKL 460
Query: 196 FSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGS 255
F+WG G RLGHG++ + L P + L +A G + +G
Sbjct: 461 FTWGDGDKNRLGHGNKETYL---------LPTCVSSLIDYNFNQIACGHTFTVALTTSGH 511
Query: 256 VFIFGERGIDKLCMKETSDATKPSLISKL---PYSEEVSCGGYHTCVLTNSGELYTWGSN 312
VF G +L SD P L+ + EE+SCG +H VLT+ E++TWG
Sbjct: 512 VFTMGGTSHGQLG-SSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKG 570
Query: 313 ENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAI 353
NG LG G + P V+ + V +SCG T++I
Sbjct: 571 SNGRLGHGDKDDRKTPTLVEA-LRERHVKSISCGSNFTSSI 610
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 159/359 (44%), Gaps = 38/359 (10%)
Query: 73 IACGGAHTLFLTDNGCVYAAGLNDCGQLGTSESVNYSLEPLQVLGHEKNIVHISAGYNHS 132
IACG H +T G V+ G+LG V+ L NI ++ G H+
Sbjct: 275 IACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHT 334
Query: 133 CAVTVDGELYMWGKNTNGQLGLGKRAPNIVH-LPTKVE-YLDGITIKMAALGAEHSLVIS 190
CAV+ G+L+ WG + +GL ++ H +P +V ++G+ + A G HS + +
Sbjct: 335 CAVSTSGDLFTWGDGIHN-VGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALAT 393
Query: 191 DGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAG------- 243
G+ F++G G G LGHG S+ +Y P+ ++ L G+K VA G
Sbjct: 394 ANGKLFTFGDGAFGVLGHGDRESV-----SY----PKEVKMLSGLKTLKVACGVWHTVAI 444
Query: 244 ---MLSSACTDENGSVFIFGERGIDKLCMKETSDATKPSLISKL-PYS-EEVSCGGYHTC 298
M + + + +F +G+ ++L P+ +S L Y+ +++CG T
Sbjct: 445 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTV 504
Query: 299 VLTNSGELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAI-SEGR 357
LT SG ++T G +G LG + + LP VQ + V ++SCG H A + S
Sbjct: 505 ALTTSGHVFTMGGTSHGQLGSSNSDG-KLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSE 563
Query: 358 VFTWGWGGSNGTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDVNALQVSCGFNHTGAI 416
VFTWG GSNG D P V + + +SCG N T +I
Sbjct: 564 VFTWG-KGSNGRLG-----------HGDKDDRKTPTLVEALRERHVKSISCGSNFTSSI 610
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 125/270 (46%), Gaps = 29/270 (10%)
Query: 119 EKNIV----HISAGYNHSCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGI 174
E N+V I+ G H VT GE++ W + G+LG G + V P VE+L
Sbjct: 265 ESNVVLDVHQIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVD--VCRPKLVEFLALT 322
Query: 175 TIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIR-DLE 233
I A G H+ +S G+ F+WG G+ H LLG S + P+ + +E
Sbjct: 323 NIDFVACGEYHTCAVSTSGDLFTWGDGI-------HNVGLLGHGSDLSHWIPKRVSGPVE 375
Query: 234 GIKVKYVAAGMLSSACTDENGSVFIFGERGIDKLCMKETSDATKPSLISKLP--YSEEVS 291
G++V VA G SA NG +F FG+ L + + P + L + +V+
Sbjct: 376 GLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVA 435
Query: 292 CGGYHTCVL----------TNSGELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVS 341
CG +HT + T+S +L+TWG + LG G+ E LP V + + +
Sbjct: 436 CGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSS-LIDYNFN 494
Query: 342 QVSCGWKHTAAI-SEGRVFTWGWGGSNGTF 370
Q++CG T A+ + G VFT G G S+G
Sbjct: 495 QIACGHTFTVALTTSGHVFTMG-GTSHGQL 523
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 133/303 (43%), Gaps = 51/303 (16%)
Query: 139 GELYMWGK------NTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDG 192
G++Y+WG+ + +G + +++ +P +E + + A G H +++
Sbjct: 230 GDVYVWGEVWSDGISPDGVVNSTTVKIDVL-IPKPLESNVVLDVHQIACGVRHIALVTRQ 288
Query: 193 GEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDE 252
GE F+W GRLGHG + + P+L+ L + +VA G +
Sbjct: 289 GEVFTWEEEAGGRLGHGIQVDVC---------RPKLVEFLALTNIDFVACGEYHTCAVST 339
Query: 253 NGSVFIFGERGIDKL-CMKETSDATK--PSLISKLPYSEE---VSCGGYHTCVLTNSGEL 306
+G +F +G+ GI + + SD + P +S + V+CG +H+ + T +G+L
Sbjct: 340 SGDLFTWGD-GIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALATANGKL 398
Query: 307 YTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVS--QVSCGWKHTAAISE--------- 355
+T+G G LG G E++ P++V+ M S + +V+CG HT AI E
Sbjct: 399 FTFGDGAFGVLGHGDRESVSYPKEVK---MLSGLKTLKVACGVWHTVAIVEVMNQTGTST 455
Query: 356 --GRVFTWGWGGSNGTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDVNALQVSCGFNHT 413
++FTWG G N Y+ P V D N Q++CG T
Sbjct: 456 SSRKLFTWGDGDKN------------RLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFT 503
Query: 414 GAI 416
A+
Sbjct: 504 VAL 506
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 4/156 (2%)
Query: 28 SSTQPGKRFAALWGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNG 87
+ST K F WG+GD RLG G+ E+ P S+ ++++ IACG T+ LT +G
Sbjct: 453 TSTSSRKLFT--WGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSG 510
Query: 88 CVYAAGLNDCGQLGTSESVNYSLEPLQVLGHEKNIVHISAGYNHSCAVTVDGELYMWGKN 147
V+ G GQLG+S S +Q + + IS G +H +T E++ WGK
Sbjct: 511 HVFTMGGTSHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKG 570
Query: 148 TNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGA 183
+NG+LG G + PT VE L +K + G+
Sbjct: 571 SNGRLGHGDKDDR--KTPTLVEALRERHVKSISCGS 604
>AT3G26100.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:9538063-9540149 FORWARD
LENGTH=532
Length = 532
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 146/305 (47%), Gaps = 20/305 (6%)
Query: 71 QAIACGGAHTLFLTDNGCVYAAGLNDCGQLGTSESVNYS-LEPLQVLGHEKNIVHISAGY 129
QA+A G H++ +T G VY G N+ GQLG + + + ++P++ L + I+ +AG
Sbjct: 147 QAVA-GPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVR-IIQAAAGA 204
Query: 130 NHSCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVI 189
+ ++ DG++Y GK + G+ G + V P V L I + AA+G + V+
Sbjct: 205 ARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVL 264
Query: 190 SDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPR-LIRDLEGIKVKYVAAG---ML 245
S G+ +++ G GRLGH E+ ++ PR L+ LE + V +AAG +L
Sbjct: 265 SREGKVYTFSWGNDGRLGHQTEA---------ADVEPRPLLGPLENVPVVQIAAGYCYLL 315
Query: 246 SSACTDENGSVFIFGERGIDKLCMKETSDATKPSLISKLPY----SEEVSCGGYHTCVLT 301
+ AC SV+ G KL +D P +I + V+ G +H V+
Sbjct: 316 ALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVG 375
Query: 302 NSGELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAISEGRVFTW 361
G + TWG GCLG G+ E +P+ V+G +V + + +G V+++
Sbjct: 376 QDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSF 435
Query: 362 GWGGS 366
G G S
Sbjct: 436 GCGES 440
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 106/246 (43%), Gaps = 22/246 (8%)
Query: 30 TQPGKRFAALWGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQA-IACGGAHTLFLT--DN 86
++ GK + WGN GRLG + + P L + P IA G + L L N
Sbjct: 265 SREGKVYTFSWGN--DGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPN 322
Query: 87 G-CVYAAGLNDCGQLG----TSESVNYSLEPLQVLGHEKNIVHISAGYNHSCAVTVDGEL 141
G VY+ G G+LG T E +E Q+L + +V +AG H+ V DG +
Sbjct: 323 GMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVV--AAGAWHAAVVGQDGRV 380
Query: 142 YMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMG 201
WG G LG G V P VE L + A G + V+SD G+ +S+G G
Sbjct: 381 CTWGWGRYGCLGHGNEECESV--PKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCG 438
Query: 202 VSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSA-------CTDENG 254
S LGH H S + + +P ++ L+ + + V + +S E+G
Sbjct: 439 ESASLGH-HPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESG 497
Query: 255 SVFIFG 260
+F FG
Sbjct: 498 KLFAFG 503
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 19/194 (9%)
Query: 31 QPGKRFAALWGNGDHGRLGLGSLESQWRPAVCSAF--LNHSPQAIACGGAHTLFLTDNGC 88
QP G G G+LG GS + P V F LN P+ +A G H + +G
Sbjct: 320 QPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGR 379
Query: 89 VYAAGLNDCGQLGT-SESVNYSLEPLQVLGHEKNIVHISAGYNHSCAVTVDGELYMWGKN 147
V G G LG +E + ++ L H K VH++ G + V+ DG++Y +G
Sbjct: 380 VCTWGWGRYGCLGHGNEECESVPKVVEGLSHVK-AVHVATGDYTTFVVSDDGDVYSFGCG 438
Query: 148 TNGQLG-------LGKRAPNIVHLPTKVEYLDGITIKMAALGA-------EHSLVISDGG 193
+ LG G R N++ PT V L + +M + H+ +++ G
Sbjct: 439 ESASLGHHPSFDEQGNRHANVLS-PTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESG 497
Query: 194 EAFSWGMGVSGRLG 207
+ F++G G G+LG
Sbjct: 498 KLFAFGAGDQGQLG 511
>AT3G26100.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:9538458-9540149 FORWARD
LENGTH=432
Length = 432
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 145/305 (47%), Gaps = 20/305 (6%)
Query: 71 QAIACGGAHTLFLTDNGCVYAAGLNDCGQLGTSESVNYS-LEPLQVLGHEKNIVHISAGY 129
QA+A G H++ +T G VY G N+ GQLG + + + ++P++ L I+ +AG
Sbjct: 47 QAVA-GPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSL-QGVRIIQAAAGA 104
Query: 130 NHSCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVI 189
+ ++ DG++Y GK + G+ G + V P V L I + AA+G + V+
Sbjct: 105 ARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVL 164
Query: 190 SDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPR-LIRDLEGIKVKYVAAG---ML 245
S G+ +++ G GRLGH E+ ++ PR L+ LE + V +AAG +L
Sbjct: 165 SREGKVYTFSWGNDGRLGHQTEA---------ADVEPRPLLGPLENVPVVQIAAGYCYLL 215
Query: 246 SSACTDENGSVFIFGERGIDKLCMKETSDATKPSLISKLPY----SEEVSCGGYHTCVLT 301
+ AC SV+ G KL +D P +I + V+ G +H V+
Sbjct: 216 ALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVG 275
Query: 302 NSGELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAISEGRVFTW 361
G + TWG GCLG G+ E +P+ V+G +V + + +G V+++
Sbjct: 276 QDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSF 335
Query: 362 GWGGS 366
G G S
Sbjct: 336 GCGES 340
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 106/246 (43%), Gaps = 22/246 (8%)
Query: 30 TQPGKRFAALWGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQA-IACGGAHTLFLT--DN 86
++ GK + WGN GRLG + + P L + P IA G + L L N
Sbjct: 165 SREGKVYTFSWGN--DGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQPN 222
Query: 87 G-CVYAAGLNDCGQLG----TSESVNYSLEPLQVLGHEKNIVHISAGYNHSCAVTVDGEL 141
G VY+ G G+LG T E +E Q+L + +V +AG H+ V DG +
Sbjct: 223 GMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVV--AAGAWHAAVVGQDGRV 280
Query: 142 YMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMG 201
WG G LG G V P VE L + A G + V+SD G+ +S+G G
Sbjct: 281 CTWGWGRYGCLGHGNEECESV--PKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCG 338
Query: 202 VSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSA-------CTDENG 254
S LGH H S + + +P ++ L+ + + V + +S E+G
Sbjct: 339 ESASLGH-HPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESG 397
Query: 255 SVFIFG 260
+F FG
Sbjct: 398 KLFAFG 403
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 19/194 (9%)
Query: 31 QPGKRFAALWGNGDHGRLGLGSLESQWRPAVCSAF--LNHSPQAIACGGAHTLFLTDNGC 88
QP G G G+LG GS + P V F LN P+ +A G H + +G
Sbjct: 220 QPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGR 279
Query: 89 VYAAGLNDCGQLGT-SESVNYSLEPLQVLGHEKNIVHISAGYNHSCAVTVDGELYMWGKN 147
V G G LG +E + ++ L H K VH++ G + V+ DG++Y +G
Sbjct: 280 VCTWGWGRYGCLGHGNEECESVPKVVEGLSHVK-AVHVATGDYTTFVVSDDGDVYSFGCG 338
Query: 148 TNGQLG-------LGKRAPNIVHLPTKVEYLDGITIKMAALGA-------EHSLVISDGG 193
+ LG G R N++ PT V L + +M + H+ +++ G
Sbjct: 339 ESASLGHHPSFDEQGNRHANVLS-PTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESG 397
Query: 194 EAFSWGMGVSGRLG 207
+ F++G G G+LG
Sbjct: 398 KLFAFGAGDQGQLG 411
>AT3G15430.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:5209408-5211562 FORWARD
LENGTH=488
Length = 488
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 133/290 (45%), Gaps = 33/290 (11%)
Query: 57 WRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCGQLGTSESVNYSL----EP 112
+RP + A + +A G T+FL+ G Y G N GQLG ++++ + E
Sbjct: 205 FRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEF 264
Query: 113 LQVLGHEKNIVHISAGYNHSCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLD 172
L+ +G +V I+AG ++ AVT DG +Y +G +N LG G++ + +
Sbjct: 265 LKTIG---PVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRK 321
Query: 173 GITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDL 232
GI I + G EH++ + G ++WG G G LGHG E+ + TP+++ +L
Sbjct: 322 GIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDEN---------DKITPQVLVNL 372
Query: 233 EGIKVKYVAAGMLSSACTDENGSVFIFG----------ERGI-DKLCMKETSDATKPSLI 281
V A + E G ++ FG +RG+ DK+ + KP +
Sbjct: 373 NNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRV 432
Query: 282 SKLPYSEEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPEAIHLPEKV 331
S +VS G YHT V+T G ++ +G NE LG S P ++
Sbjct: 433 S------QVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 129/302 (42%), Gaps = 23/302 (7%)
Query: 73 IACGGAHTLFLTDNGCVYAAGLNDCGQL--GTSESVNYSLEPLQVLGHEKNIVHISAGYN 130
IA G HTL L +N VY+ G++ G L G+ + + P++ + +SA N
Sbjct: 116 IATGKYHTL-LINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIE-FPFPAQVAQVSATQN 173
Query: 131 HSCAVTVDGELYMWGKNTNGQLG-LGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVI 189
HS V G++ G N++ G L P + P VE L G K A G ++ +
Sbjct: 174 HSAFVLQSGQVLTCGDNSSHCCGHLDTSRP--IFRPKLVEALKGTPCKQVAAGLHFTVFL 231
Query: 190 SDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGI-KVKYVAAGMLSSA 248
S G A++ G G+LGHG T P+++ L+ I V +AAG
Sbjct: 232 SREGHAYTCGSNTHGQLGHG---------DTLDRPVPKVVEFLKTIGPVVQIAAGPSYVL 282
Query: 249 CTDENGSVFIFGERGIDKLCMKETSDATKPSLISKLP----YSEEVSCGGYHTCVLTNSG 304
++GSV+ FG L E D +P +I + VS G H L ++G
Sbjct: 283 AVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNG 342
Query: 305 ELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAISE-GRVFTWGW 363
+YTWG G LG G E + +V QV + T + E G ++ +GW
Sbjct: 343 RVYTWGKGYCGALGHGD-ENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGW 401
Query: 364 GG 365
G
Sbjct: 402 MG 403
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 9/184 (4%)
Query: 30 TQPGKRFAALWGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQA--IACGGAHTLFLTDNG 87
TQ G ++ +G+G + LG G + + +P V AF ++ G H + L NG
Sbjct: 285 TQDGSVYS--FGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNG 342
Query: 88 CVYAAGLNDCGQLGTSESVNYSLEPLQVLGHEKNI--VHISAGYNHSCAVTVDGELYMWG 145
VY G CG LG + N + P QVL + N V + A + + G LY +G
Sbjct: 343 RVYTWGKGYCGALGHGDE-NDKITP-QVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFG 400
Query: 146 KNTNGQLGLGKR-APNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSG 204
G LG R + V P +E L + + G H++V++ G F +G
Sbjct: 401 WMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERA 460
Query: 205 RLGH 208
+LGH
Sbjct: 461 QLGH 464
>AT3G15430.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:5209408-5211562 FORWARD
LENGTH=488
Length = 488
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 133/290 (45%), Gaps = 33/290 (11%)
Query: 57 WRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCGQLGTSESVNYSL----EP 112
+RP + A + +A G T+FL+ G Y G N GQLG ++++ + E
Sbjct: 205 FRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEF 264
Query: 113 LQVLGHEKNIVHISAGYNHSCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLD 172
L+ +G +V I+AG ++ AVT DG +Y +G +N LG G++ + +
Sbjct: 265 LKTIG---PVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRK 321
Query: 173 GITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDL 232
GI I + G EH++ + G ++WG G G LGHG E+ + TP+++ +L
Sbjct: 322 GIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDEN---------DKITPQVLVNL 372
Query: 233 EGIKVKYVAAGMLSSACTDENGSVFIFG----------ERGI-DKLCMKETSDATKPSLI 281
V A + E G ++ FG +RG+ DK+ + KP +
Sbjct: 373 NNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRV 432
Query: 282 SKLPYSEEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPEAIHLPEKV 331
S +VS G YHT V+T G ++ +G NE LG S P ++
Sbjct: 433 S------QVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 129/302 (42%), Gaps = 23/302 (7%)
Query: 73 IACGGAHTLFLTDNGCVYAAGLNDCGQL--GTSESVNYSLEPLQVLGHEKNIVHISAGYN 130
IA G HTL L +N VY+ G++ G L G+ + + P++ + +SA N
Sbjct: 116 IATGKYHTL-LINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIE-FPFPAQVAQVSATQN 173
Query: 131 HSCAVTVDGELYMWGKNTNGQLG-LGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVI 189
HS V G++ G N++ G L P + P VE L G K A G ++ +
Sbjct: 174 HSAFVLQSGQVLTCGDNSSHCCGHLDTSRP--IFRPKLVEALKGTPCKQVAAGLHFTVFL 231
Query: 190 SDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGI-KVKYVAAGMLSSA 248
S G A++ G G+LGHG T P+++ L+ I V +AAG
Sbjct: 232 SREGHAYTCGSNTHGQLGHG---------DTLDRPVPKVVEFLKTIGPVVQIAAGPSYVL 282
Query: 249 CTDENGSVFIFGERGIDKLCMKETSDATKPSLISKLP----YSEEVSCGGYHTCVLTNSG 304
++GSV+ FG L E D +P +I + VS G H L ++G
Sbjct: 283 AVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNG 342
Query: 305 ELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAISE-GRVFTWGW 363
+YTWG G LG G E + +V QV + T + E G ++ +GW
Sbjct: 343 RVYTWGKGYCGALGHGD-ENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGW 401
Query: 364 GG 365
G
Sbjct: 402 MG 403
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 9/184 (4%)
Query: 30 TQPGKRFAALWGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQA--IACGGAHTLFLTDNG 87
TQ G ++ +G+G + LG G + + +P V AF ++ G H + L NG
Sbjct: 285 TQDGSVYS--FGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNG 342
Query: 88 CVYAAGLNDCGQLGTSESVNYSLEPLQVLGHEKNI--VHISAGYNHSCAVTVDGELYMWG 145
VY G CG LG + N + P QVL + N V + A + + G LY +G
Sbjct: 343 RVYTWGKGYCGALGHGDE-NDKITP-QVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFG 400
Query: 146 KNTNGQLGLGKR-APNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSG 204
G LG R + V P +E L + + G H++V++ G F +G
Sbjct: 401 WMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERA 460
Query: 205 RLGH 208
+LGH
Sbjct: 461 QLGH 464
>AT3G23270.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr3:8316436-8320337 FORWARD LENGTH=1045
Length = 1045
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 148/347 (42%), Gaps = 45/347 (12%)
Query: 30 TQPGKRFAALWGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCV 89
T+ G+ F WG GRLG G RP + + +ACG HT ++ +G +
Sbjct: 267 TRQGEVFT--WGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDL 324
Query: 90 YA--AGLNDCGQLGTSESVNY--------SLEPLQVLGHEKNIVHISAGYNHSCAVTVDG 139
++ G+++ G LG +++ LE LQVL ++ G HS T +G
Sbjct: 325 FSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLS-------VACGTWHSALATANG 377
Query: 140 ELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISD-------- 191
+L+ +G G LG G R V P +V+ L+G+ A H+ I +
Sbjct: 378 KLFTFGDGAFGVLGHGNRES--VSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATS 435
Query: 192 --GGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSAC 249
+ F+WG G RLGHG++ + L P + L +A G +
Sbjct: 436 MSSRKLFTWGDGDKNRLGHGNKETYL---------LPTCVSSLIDYNFHKIACGHTFTVA 486
Query: 250 TDENGSVFIFGERGIDKLCMKETSDATKPSLISKL---PYSEEVSCGGYHTCVLTNSGEL 306
+G VF G +L SD P L+ + EE++CG +H VLT+ E+
Sbjct: 487 LTTSGHVFTMGGTAHGQLG-NSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEV 545
Query: 307 YTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAI 353
+TWG NG LG G E P V+ V +SCG T++I
Sbjct: 546 FTWGKGANGRLGHGDTEDKRTPTLVEA-LRDRHVKSLSCGSNFTSSI 591
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 159/359 (44%), Gaps = 38/359 (10%)
Query: 73 IACGGAHTLFLTDNGCVYAAGLNDCGQLGTSESVNYSLEPLQVLGHEKNIVHISAGYNHS 132
I CG H +T G V+ G G+LG V+ S L NI ++ G H+
Sbjct: 256 IVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHT 315
Query: 133 CAVTVDGELYMWGKNTNGQLGLGKRAPNIVH-LPTKVE-YLDGITIKMAALGAEHSLVIS 190
C V+ G+L+ WG + +GL +I H +P +V L+G+ + A G HS + +
Sbjct: 316 CVVSTSGDLFSWGDGIHN-VGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALAT 374
Query: 191 DGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACT 250
G+ F++G G G LGHG+ S+ +Y P+ ++ L G+K VA + +A
Sbjct: 375 ANGKLFTFGDGAFGVLGHGNRESV-----SY----PKEVQSLNGLKTVKVACSIWHTAAI 425
Query: 251 DE----------NGSVFIFGERGIDKLCMKETSDATKPSLISKL-PYS-EEVSCGGYHTC 298
E + +F +G+ ++L P+ +S L Y+ +++CG T
Sbjct: 426 VEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTV 485
Query: 299 VLTNSGELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAI-SEGR 357
LT SG ++T G +G LG S LP VQ + V +++CG H A + S
Sbjct: 486 ALTTSGHVFTMGGTAHGQLG-NSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSE 544
Query: 358 VFTWGWGGSNGTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDVNALQVSCGFNHTGAI 416
VFTWG G+NG D P V D + +SCG N T +I
Sbjct: 545 VFTWG-KGANGRLG-----------HGDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSI 591
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 124/280 (44%), Gaps = 28/280 (10%)
Query: 101 GTSESVNYSLEPLQVLGHEKNIV----HISAGYNHSCAVTVDGELYMWGKNTNGQLGLGK 156
GT+ + + L E N+V I G H VT GE++ WG+ G+LG G
Sbjct: 228 GTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGI 287
Query: 157 RAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGHESSLLG 216
+ + P VE+L I A G H+ V+S G+ FSWG G+ H LLG
Sbjct: 288 QVD--ISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGI-------HNVGLLG 338
Query: 217 FFKTYSEYTPRLIR-DLEGIKVKYVAAGMLSSACTDENGSVFIFGERGIDKLCMKETSDA 275
S + P+ + LEG++V VA G SA NG +F FG+ L
Sbjct: 339 HGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESV 398
Query: 276 TKPSLISKLP--YSEEVSCGGYHTCVLT----------NSGELYTWGSNENGCLGIGSPE 323
+ P + L + +V+C +HT + +S +L+TWG + LG G+ E
Sbjct: 399 SYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKE 458
Query: 324 AIHLPEKVQGPFMKSSVSQVSCGWKHTAAI-SEGRVFTWG 362
LP V + + +++CG T A+ + G VFT G
Sbjct: 459 TYLLPTCVSS-LIDYNFHKIACGHTFTVALTTSGHVFTMG 497
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 132/300 (44%), Gaps = 45/300 (15%)
Query: 139 GELYMWGKN-TNGQLGLGKRAPNIVHL----PTKVEYLDGITIKMAALGAEHSLVISDGG 193
G++Y+WG+ T G L G + V P +E + + G H +++ G
Sbjct: 211 GDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQG 270
Query: 194 EAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDEN 253
E F+WG V GRLGHG + + P+L+ L + +VA G + +
Sbjct: 271 EVFTWGEEVGGRLGHGIQVDI---------SRPKLVEFLALTNIDFVACGEYHTCVVSTS 321
Query: 254 GSVFIFGERGIDKL-CMKETSDATK--PSLISKLPYSEE---VSCGGYHTCVLTNSGELY 307
G +F +G+ GI + + SD + P +S + V+CG +H+ + T +G+L+
Sbjct: 322 GDLFSWGD-GIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLF 380
Query: 308 TWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAISE-----------G 356
T+G G LG G+ E++ P++VQ +V +V+C HTAAI E
Sbjct: 381 TFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTV-KVACSIWHTAAIVEVMGQTATSMSSR 439
Query: 357 RVFTWGWGGSNGTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDVNALQVSCGFNHTGAI 416
++FTWG G N Y+ P V D N +++CG T A+
Sbjct: 440 KLFTWGDGDKN------------RLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVAL 487
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 28 SSTQPGKRFAALWGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNG 87
++T R WG+GD RLG G+ E+ P S+ ++++ IACG T+ LT +G
Sbjct: 432 TATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSG 491
Query: 88 CVYAAGLNDCGQLGTSESVNYSLEPLQVLGHEKNIVHISAGYNHSCAVTVDGELYMWGKN 147
V+ G GQLG S S +Q + + I+ G +H +T E++ WGK
Sbjct: 492 HVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKG 551
Query: 148 TNGQLGLG----KRAPNIVH 163
NG+LG G KR P +V
Sbjct: 552 ANGRLGHGDTEDKRTPTLVE 571
>AT3G02510.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:522524-524536 REVERSE
LENGTH=310
Length = 310
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 141/305 (46%), Gaps = 31/305 (10%)
Query: 40 WGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCGQ 99
WG+G+ G+LG+G+ E + V A +S +++ G ++L + D+G ++ G N G
Sbjct: 10 WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69
Query: 100 LGTSESVNYSLEPLQV--LGHEKNIVHISAGYNHSCAVTVDGELYMWGKNTNGQLG---- 153
LG P +V L + K I + G H AV G Y WG N GQ G
Sbjct: 70 LGHQPETKTENIPSRVKALANVK-ITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPL 128
Query: 154 ---LGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGH 210
+G+ + +P + +T++ A G HS+V++ G ++WG
Sbjct: 129 KDEMGRPVRRDIVIPKRC--APKLTVRQVAAGGTHSVVLTREGHVWTWG----------- 175
Query: 211 ESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGIDKLCMK 270
+ G K S P ++ LE V+ +A G + +E+G + +G +L
Sbjct: 176 QPWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTG 231
Query: 271 ETSDATKPSLISKLPYSE--EVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPE--AIH 326
+T + P + L +++ GG+H+ LT+ GE+Y WG E+G LG+G + +
Sbjct: 232 DTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKM 291
Query: 327 LPEKV 331
+P+KV
Sbjct: 292 VPQKV 296
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 125/283 (44%), Gaps = 21/283 (7%)
Query: 89 VYAAGLNDCGQLG--TSESVNYS-----LEPLQVLGHEKNIVHISAGYNHSCAVTVDGEL 141
+ A G + GQLG T+E ++ LEP V +++V +G +S A+ DG +
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSV----RSVV---SGSRNSLAICDDGTM 59
Query: 142 YMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMG 201
+ WG N G LG + ++P++V+ L + I AA+G H L + D G A++WG
Sbjct: 60 FTWGWNQRGTLGH-QPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGN 118
Query: 202 VSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGE 261
G+ G +G P+ R + V+ VAAG S G V+ +G+
Sbjct: 119 EYGQCGEEPLKDEMGRPVRRDIVIPK--RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176
Query: 262 RGIDKLCMKETSDATKPSLISKLPYSEEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGS 321
+ + P + L ++ G +H L G L WG+NE G LG G
Sbjct: 177 ----PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232
Query: 322 PEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAISEGRVFTWGWG 364
+ P VQG + V + GW TA +G V+ WG G
Sbjct: 233 TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRG 275
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 73 IACGGAHTLFLTDNGCVYAAGLNDCGQLGTSESVNYSLEPLQVLGHEK-NIVHISAGYNH 131
IA G H L L ++G + A G N+ GQLGT ++ S P+ V G + +V I+AG H
Sbjct: 201 IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTS-HPVPVQGLDDLTLVDIAAGGWH 259
Query: 132 SCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYL 171
S A+T GE+Y WG+ +G+LGLG + +P KV L
Sbjct: 260 STALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLL 299
>AT1G69710.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:26222325-26226530 FORWARD LENGTH=1041
Length = 1041
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 161/370 (43%), Gaps = 53/370 (14%)
Query: 71 QAIACGGAHTLFLTDNGCVYA----AGLNDCGQLGTSESVNYSLEPLQVLGHEKNIVHIS 126
Q IACG H + +T G +++ G L T + ++ LG + ++
Sbjct: 303 QNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKS----LA 358
Query: 127 AGYNHSCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVE-YLDGITIKMAALGAEH 185
G H+CA+T G+LY WG T+ LG + +P +V L G+ + A G H
Sbjct: 359 CGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWH 418
Query: 186 SLVISDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGML 245
+ V++ G+ F++G G G LGHG S PR + L G+ V VA G+
Sbjct: 419 TAVVASSGQLFTFGDGTFGALGHGDRRST---------SVPREVESLIGLIVTKVACGVW 469
Query: 246 SSACTDE-------------NGSVFIFGERGIDKLCMKETSDATKPSLISKLPYSE--EV 290
+A E G VF +G+ +L + P + L +V
Sbjct: 470 HTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQV 529
Query: 291 SCGGYHTCVLTNSGELYTWGSNENGCLGIGSPEAI-HLPEKVQGPFMKSSVSQVSCGWKH 349
+CG T T+ G +YT GS G LG +P A + PE+V+G +++SV +++CG H
Sbjct: 530 ACGHSLTVSRTSRGHVYTMGSTAYGQLG--NPTAKGNFPERVEGDIVEASVEEIACGSYH 587
Query: 350 TAAI-SEGRVFTWGWG--GSNGTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDVNALQV 406
A + S+ ++TWG G G G +V+ PA V F + +
Sbjct: 588 VAVLTSKSEIYTWGKGLNGQLGHGNVENKRE--------------PAVVGFLREKQVKAI 633
Query: 407 SCGFNHTGAI 416
+CG N T I
Sbjct: 634 TCGSNFTAVI 643
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 135/316 (42%), Gaps = 34/316 (10%)
Query: 58 RPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYA--AGLNDCGQLGTSESVNYSLEPLQV 115
+P S+ +++ACG HT +T +G +Y+ G ++ LG + + P +V
Sbjct: 342 KPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWI-PKRV 400
Query: 116 LGHEKN--IVHISAGYNHSCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDG 173
G + + ++ G H+ V G+L+ +G T G LG G R V P +VE L G
Sbjct: 401 TGDLQGLYVSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSV--PREVESLIG 458
Query: 174 ITIKMAALGAEHSLVI-------------SDGGEAFSWGMGVSGRLGHGHESSLLGFFKT 220
+ + A G H+ + S G+ F+WG G G+LGHG + L
Sbjct: 459 LIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKL----- 513
Query: 221 YSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGIDKLCMKETSDATKPSL 280
P + L + VA G + G V+ G +L T+ P
Sbjct: 514 ----LPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLG-NPTAKGNFPER 568
Query: 281 IS---KLPYSEEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMK 337
+ EE++CG YH VLT+ E+YTWG NG LG G+ E P V G +
Sbjct: 569 VEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREP-AVVGFLRE 627
Query: 338 SSVSQVSCGWKHTAAI 353
V ++CG TA I
Sbjct: 628 KQVKAITCGSNFTAVI 643
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 19/233 (8%)
Query: 193 GEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDE 252
G+ F WG +S + G +SL T P+ + + + +A G + +
Sbjct: 260 GDVFVWGESISDGVLSGTGNSLNS--TTEDALLPKALESTIVLDAQNIACGKCHAVLVTK 317
Query: 253 NGSVFIFGERGIDKLCMKETSDATKPSLISKLPY--SEEVSCGGYHTCVLTNSGELYTWG 310
G +F +GE KL +DA KP IS + + ++CG +HTC +T SG+LY+WG
Sbjct: 318 QGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWG 377
Query: 311 SNENGC--LGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAI-SEGRVFTWGWGGSN 367
+ LG G+ + +P++V G VS V+CG HTA + S G++FT+G +
Sbjct: 378 DGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFTFG----D 433
Query: 368 GTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDVNALQVSCGFNHTGAILEYT 420
GTF +V+ + V +V+CG HT A++E T
Sbjct: 434 GTFGALGHGDRRSTSVPREVESLIGLIVT--------KVACGVWHTAAVVEVT 478
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 124/250 (49%), Gaps = 34/250 (13%)
Query: 139 GELYMWGKN-TNGQL-GLGKRAPNIVH---LPTKVEYLDGITIKMAALGAEHSLVISDGG 193
G++++WG++ ++G L G G + LP +E + + A G H+++++ G
Sbjct: 260 GDVFVWGESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQG 319
Query: 194 EAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDEN 253
E FSWG G G+LGHG E+ P+ I + G+ K +A G + ++
Sbjct: 320 EIFSWGEGKGGKLGHGLETDA---------QKPKFISSVRGLGFKSLACGDFHTCAITQS 370
Query: 254 GSVFIFGE--RGIDKLCMKETSDATKPSLIS---KLPYSEEVSCGGYHTCVLTNSGELYT 308
G ++ +G+ +D L S P ++ + Y +V+CG +HT V+ +SG+L+T
Sbjct: 371 GDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQLFT 430
Query: 309 WGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAI--------------S 354
+G G LG G + +P +V+ + V++V+CG HTAA+ S
Sbjct: 431 FGDGTFGALGHGDRRSTSVPREVES-LIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSS 489
Query: 355 EGRVFTWGWG 364
G+VFTWG G
Sbjct: 490 RGQVFTWGDG 499
>AT1G65920.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:24525267-24529204 REVERSE LENGTH=1006
Length = 1006
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 155/349 (44%), Gaps = 29/349 (8%)
Query: 19 LGLGFPTRSSSTQPGKRFAALWGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGA 78
+ LG + T+ G+ F WGNG+ G+LGL P + + + +++AC
Sbjct: 297 ISLGAKHAALVTRQGEVFC--WGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDH 354
Query: 79 HTLFLTDNGCVYAAGLNDCGQLGTSESVNYSLEPLQVLGHEKNIVHISAGYNHSCAVTVD 138
T +T++G +Y G+ D G + S S + + VLG ++ ++ G H+ VT
Sbjct: 355 QTCAVTESGELYLWGI-DGGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSS 413
Query: 139 GELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDG------ 192
G+L+ +G T G LG G + V P +VE L + + + G H+ I +
Sbjct: 414 GQLFTYGSGTFGVLGHG--SLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKF 471
Query: 193 ------GEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLS 246
G+ F+WG G GRLGH L P + +L V+ G
Sbjct: 472 YNAKSCGKLFTWGDGDKGRLGHADSKRKL---------VPTCVTELIDHDFIKVSCGWTL 522
Query: 247 SACTDENGSVFIFGERGIDKLCMKETSDATKPSLISKL--PYSEEVSCGGYHTCVLTNSG 304
+ +G+V+ G +L D + ++ L + ++++ G +H VLT+ G
Sbjct: 523 TVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFG 582
Query: 305 ELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAI 353
+YTWG NG LG+G + P V+ P V ++CG TAAI
Sbjct: 583 NVYTWGKGMNGQLGLGDVRDRNSPVLVE-PLGDRLVESIACGLNLTAAI 630
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 135/297 (45%), Gaps = 50/297 (16%)
Query: 140 ELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWG 199
++ +WG T L G + N P +E ++ +LGA+H+ +++ GE F WG
Sbjct: 260 DIMIWGAITG--LIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWG 317
Query: 200 MGVSGRLGHGHESSLLGFFKTYSEYT-PRLIRDLEGIKVKYVAAGMLSSACTDENGSVFI 258
G SG+LG K + P+ + LE + V+ VA + E+G +++
Sbjct: 318 NGNSGKLG----------LKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYL 367
Query: 259 FG------ERGIDKLCMKETSDATKPSLISKLPYSEEVSCGGYHTCVLTNSGELYTWGSN 312
+G E+ + ++ SD SL V+CG +HT ++T+SG+L+T+GS
Sbjct: 368 WGIDGGTIEQSGSQFLTRKISDVLGGSLTVL-----SVACGAWHTAIVTSSGQLFTYGSG 422
Query: 313 ENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAISE-------------GRVF 359
G LG GS E++ P++V+ + V VSCG HTAAI E G++F
Sbjct: 423 TFGVLGHGSLESVTKPKEVES-LRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLF 481
Query: 360 TWGWGGSNGTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDVNALQVSCGFNHTGAI 416
TWG G D + P V D + ++VSCG+ T A+
Sbjct: 482 TWGDGDKGRLGHADSKRK------------LVPTCVTELIDHDFIKVSCGWTLTVAL 526
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 118/263 (44%), Gaps = 40/263 (15%)
Query: 121 NIVHISAGYNHSCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAA 180
++ IS G H+ VT GE++ WG +G+LGL K +I H P +VE L+ + ++ A
Sbjct: 293 DVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGL-KVNIDIDH-PKRVESLEDVAVRSVA 350
Query: 181 LGAEHSLVISDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEG--IKVK 238
+ +++ GE + WG+ G E S S++ R I D+ G + V
Sbjct: 351 CSDHQTCAVTESGELYLWGID-----GGTIEQS-------GSQFLTRKISDVLGGSLTVL 398
Query: 239 YVAAGMLSSACTDENGSVFIFGERGIDKLCMKETSDATKPSLISKLPYSE--EVSCGGYH 296
VA G +A +G +F +G L TKP + L + VSCG +H
Sbjct: 399 SVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWH 458
Query: 297 TCVLTNS------------GELYTWGSNENGCLGIGSPEAIHLP----EKVQGPFMKSSV 340
T + + G+L+TWG + G LG + +P E + F+K
Sbjct: 459 TAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIK--- 515
Query: 341 SQVSCGWKHTAAIS-EGRVFTWG 362
VSCGW T A+S G V+T G
Sbjct: 516 --VSCGWTLTVALSISGTVYTMG 536
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 86/197 (43%), Gaps = 17/197 (8%)
Query: 225 TPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGIDKLCMKETSDATKPSLISKL 284
+P+L+ V+ ++ G +A G VF +G KL +K D P + L
Sbjct: 282 SPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESL 341
Query: 285 P--YSEEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQ 342
V+C + TC +T SGELY WG + GS V G + +V
Sbjct: 342 EDVAVRSVACSDHQTCAVTESGELYLWGIDGGTIEQSGSQFLTRKISDVLGGSL--TVLS 399
Query: 343 VSCGWKHTAAI-SEGRVFTWGWGGSNGTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDV 401
V+CG HTA + S G++FT+G +GTF V +V+ + +V
Sbjct: 400 VACGAWHTAIVTSSGQLFTYG----SGTFGVLGHGSLESVTKPKEVESLRRMKV------ 449
Query: 402 NALQVSCGFNHTGAILE 418
+ VSCG HT AI+E
Sbjct: 450 --ISVSCGPWHTAAIVE 464
>AT3G53830.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:19940814-19943592 FORWARD
LENGTH=472
Length = 472
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 118/262 (45%), Gaps = 44/262 (16%)
Query: 121 NIVHISAGYNHSCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGIT----- 175
I ++ G H+ A++ G+++ WG GQLGLG R +V P + L+ I
Sbjct: 215 RITSVATGGRHTLALSDLGQIWGWGYGGEGQLGLGSRI-KMVSSPHLIPCLESIGSGKER 273
Query: 176 -----------------------IKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGHES 212
IK + G HS I+D G ++G G+ G+ GHG+
Sbjct: 274 SFILHQGGTTTTSAQASREPGQYIKAISCGGRHSAAITDAGGLITFGWGLYGQCGHGN-- 331
Query: 213 SLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGIDKLCMKET 272
T + P + +++ ++++ VAAG+ + C +G V+ FG +L
Sbjct: 332 -------TNDQLRPMAVSEVKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGTD 384
Query: 273 SDATKPSLIS----KLPYSEEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPEAIHLP 328
P L+ + +++ VSCG H+ VL G+L WG N+ G LG+G ++P
Sbjct: 385 HAEILPRLLDGQNLEGKHAKAVSCGARHSAVLAEDGQLLCWGWNKYGQLGLGDTNDRNIP 444
Query: 329 EKVQGPFMKSSVSQVSCGWKHT 350
+VQ + +V+CGW HT
Sbjct: 445 TQVQ--LDGCRLRKVACGWWHT 464
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 40/231 (17%)
Query: 165 PTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEY 224
P+ V G+ I A G H+L +SD G+ + WG G G+LG G ++
Sbjct: 205 PSLVSVGLGVRITSVATGGRHTLALSDLGQIWGWGYGGEGQLGLGSRIKMV--------S 256
Query: 225 TPRLIRDLEGIK----------------------------VKYVAAGMLSSACTDENGSV 256
+P LI LE I +K ++ G SA + G +
Sbjct: 257 SPHLIPCLESIGSGKERSFILHQGGTTTTSAQASREPGQYIKAISCGGRHSAAITDAGGL 316
Query: 257 FIFGERGIDKLCMKETSDATKPSLISKLP--YSEEVSCGGYHTCVLTNSGELYTWGSNEN 314
FG + T+D +P +S++ E V+ G +HT +++ G++Y +G N+
Sbjct: 317 ITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRMESVAAGLWHTICISSDGKVYAFGGNQF 376
Query: 315 GCLGIGSPEAIHLPEKVQGPFMKSSVSQ-VSCGWKHTAAISE-GRVFTWGW 363
G LG G+ A LP + G ++ ++ VSCG +H+A ++E G++ WGW
Sbjct: 377 GQLGTGTDHAEILPRLLDGQNLEGKHAKAVSCGARHSAVLAEDGQLLCWGW 427
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 103/234 (44%), Gaps = 41/234 (17%)
Query: 40 WGNGDHGRLGLGS-------------LES------------QWRPAVCSAFLNHSP---- 70
WG G G+LGLGS LES Q SA + P
Sbjct: 238 WGYGGEGQLGLGSRIKMVSSPHLIPCLESIGSGKERSFILHQGGTTTTSAQASREPGQYI 297
Query: 71 QAIACGGAHTLFLTDNGCVYAAGLNDCGQLGTSESVNYSLEPLQVLGHEK-NIVHISAGY 129
+AI+CGG H+ +TD G + G GQ G + N L P+ V + + ++AG
Sbjct: 298 KAISCGGRHSAAITDAGGLITFGWGLYGQCGHGNT-NDQLRPMAVSEVKSVRMESVAAGL 356
Query: 130 NHSCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVI 189
H+ ++ DG++Y +G N GQLG G I+ + L+G K + GA HS V+
Sbjct: 357 WHTICISSDGKVYAFGGNQFGQLGTGTDHAEILPRLLDGQNLEGKHAKAVSCGARHSAVL 416
Query: 190 SDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAG 243
++ G+ WG G+LG G T P ++ L+G +++ VA G
Sbjct: 417 AEDGQLLCWGWNKYGQLGLG---------DTNDRNIPTQVQ-LDGCRLRKVACG 460
>AT5G60870.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487564 REVERSE
LENGTH=383
Length = 383
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 135/310 (43%), Gaps = 27/310 (8%)
Query: 39 LWGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCG 98
+WG GD GRLG G S + P + F HS + IA GG H++ LT G V+ G G
Sbjct: 54 IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 113
Query: 99 QLGTSESVNYSLEPLQVLGH-EKNIVHISAGYNHSCAVTVDGELYMWGKNTNGQLGLGKR 157
LG + L P +V + I I+ H+ A+T GELYMWG+
Sbjct: 114 ALG-HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 172
Query: 158 APNI-----VHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGHES 212
+ +P+KV+ L + + + G ++ ++ G+ ++WG + LG G
Sbjct: 173 GRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRG--- 228
Query: 213 SLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGIDKLCMKET 272
+ P + LEG+++ +A G S E G V +G G +L
Sbjct: 229 ------DNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSL 282
Query: 273 SDATKPSLISKLPYSEEV--SCGGYHTCV-------LTNSGELYTWGSNENGCLGI-GSP 322
+ P+ I L + V + GG + LT+ GEL+ WG+ ++ LG+ G P
Sbjct: 283 RNQKVPTEIEALADKKIVFIASGGSSSAAITGWDWFLTDGGELWMWGNAKDFQLGVPGLP 342
Query: 323 EAIHLPEKVQ 332
E P +V
Sbjct: 343 EIQTTPVEVN 352
>AT5G11580.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:3718913-3721125 FORWARD
LENGTH=553
Length = 553
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 147/349 (42%), Gaps = 78/349 (22%)
Query: 120 KNIVHISAGYNHSCAVTVDGELYMWGKNTNGQLGLGKRA----PNIVHLPTKVEYLDGIT 175
+ I+ ++AG H+ A+T DG +Y WG+ G+LG GK + P +V P + E D I
Sbjct: 16 RKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEG-DRIR 74
Query: 176 IKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDL--- 232
I A GA HSL +SD G + WG + G+LG E+SL P LI++L
Sbjct: 75 IVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSL----------APCLIKNLFER 124
Query: 233 ---------------EGIKVKYVAAGMLSSACTDENGSVFIFGERGIDKLCMKETSDATK 277
+KV V AG + S D G ++++G + +++ +
Sbjct: 125 ETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWG-----NVPPQDSEPDPR 179
Query: 278 PSLIS-KLPYS---------EEVSCGGYHTCVLTNSGE-----------LYTWGSNENGC 316
S S +P+ +V+CG H L G+ LY+WG+N +G
Sbjct: 180 LSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQ 239
Query: 317 LGIGSPEAIHLPEKVQGPFMKS--SVSQVSCGWKHTAAIS------EGRVFTWGWG-GSN 367
LG+G E+ P+ V+ KS +V ++CG HTA ++ +G W +G G N
Sbjct: 240 LGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGEN 299
Query: 368 GTFSVDXXXXXXXXXXXXDVDYICPARVCFGEDVNALQVSCGFNHTGAI 416
G D+ E + V CG HT +
Sbjct: 300 GQLGHRSNKSSSLPEPVSDLP----------EHAYLVSVDCGLFHTSVV 338
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 169/412 (41%), Gaps = 58/412 (14%)
Query: 53 LESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCGQLGT----SESVNY 108
+E + + S L+ ++A G AHT+ LT +GCVY+ G G+LGT E V
Sbjct: 1 MEDKSPTLLISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPV 60
Query: 109 SLE-PLQVLGHEKNIVHISAGYNHSCAVTVDGELYMWGKNTNGQLGL---GKRAP----N 160
+E P Q G IV ++AG HS AV+ DG ++ WG N GQLG AP N
Sbjct: 61 LVEFPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENSLAPCLIKN 120
Query: 161 IVHLPTKVEYLD------GITIKMAAL--GAEHSLVISDGGEAFSWGMGVSGRLGHGHES 212
+ T L+ G +K+ + G+ SL I + G + WG +S
Sbjct: 121 LFERETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPP------QDS 174
Query: 213 SLLGFFKTYSEYTPRLIRDLEGIKVKYVAAG------MLSSACTDENGS-----VFIFGE 261
S P I D G V VA G ++ ++ S ++ +G
Sbjct: 175 EPDPRLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGN 234
Query: 262 RGIDKLCMKETSDATKPSLISKLPYSE-----EVSCGGYHTCVLTNSGEL-------YTW 309
+L + + +P + +++CG +HT +LT E +T+
Sbjct: 235 NHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTF 294
Query: 310 GSNENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAI-SEGRVFTWGWGGSNG 368
G ENG LG S ++ LPE V + + V CG HT+ + SEG + W WG G
Sbjct: 295 GFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEG--YVWSWGMERG 352
Query: 369 TFSVDXXXXXXXXXXXXDVDYICPARVCFGED--VNALQVSCGFNHTGAILE 418
V P ++ G + +QVSCG HT +++
Sbjct: 353 LGLCPDVNFTEVEAGDDSV----PRKISGGSSRFRDPVQVSCGAAHTVLVVD 400
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 156/391 (39%), Gaps = 74/391 (18%)
Query: 40 WGNGDHGRLGLGSLESQWRPAVCSAFLNHSP------QAIACGGAHTLFLTDNGCVYAAG 93
WG G GRLG G + P V F N + +A G H+L ++D+G V+ G
Sbjct: 40 WGRGMFGRLGTGKESDELVP-VLVEFPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWG 98
Query: 94 LNDCGQLG--------------------TSESVNYSLEPLQVLGHEKNIVHISAGYNHSC 133
N GQLG +S S+N S + +G + + + AG S
Sbjct: 99 YNIYGQLGFDGENSLAPCLIKNLFERETSSSSLNDSG---REVGSDLKVCTVKAGSMMSL 155
Query: 134 AVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLD--GITIKMAALGAEHSLVISD 191
A+ G L+MWG N Q + +P LD G T+ A G EH + +
Sbjct: 156 AIDNVGGLWMWG-NVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVG 214
Query: 192 GGEA-----------FSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYV 240
G+ +SWG G+LG G S T G+ V +
Sbjct: 215 PGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGES------RARPQTVETFNQKSGLTVYDI 268
Query: 241 AAGMLSSAC------TDENGSV---FIFGERGIDKLCMKETSDATKPSLISKLP---YSE 288
A G +A T + S+ F FGE G +L + ++ P +S LP Y
Sbjct: 269 ACGAHHTALLTYRKETPKGPSICWTFGFGENG--QLGHRSNKSSSLPEPVSDLPEHAYLV 326
Query: 289 EVSCGGYHTCVLTNSGELYTWGSNENG---CLGIGSPEA----IHLPEKVQGPFMK-SSV 340
V CG +HT V+++ G +++WG E G C + E +P K+ G +
Sbjct: 327 SVDCGLFHTSVVSSEGYVWSWGM-ERGLGLCPDVNFTEVEAGDDSVPRKISGGSSRFRDP 385
Query: 341 SQVSCGWKHTAAISEGRVFTWGWG-GSNGTF 370
QVSCG HT + +G W WG G NG
Sbjct: 386 VQVSCGAAHTVLVVDGGYKLWSWGRGRNGVL 416
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 93/200 (46%), Gaps = 34/200 (17%)
Query: 40 WGNGDHGRLGLGSLESQWRPAVCSAFLNHS---PQAIACGGAHTLFLTDN-------GCV 89
WGN HG+LGLG ES+ RP F S IACG HT LT
Sbjct: 232 WGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSIC 291
Query: 90 YAAGLNDCGQLGTSESVNYSL-EPLQVLGHEKNIVHISAGYNHSCAVTVDGELYMWGKNT 148
+ G + GQLG + + SL EP+ L +V + G H+ V+ +G ++ WG
Sbjct: 292 WTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWGM-- 349
Query: 149 NGQLGLGKRAPNI---------VHLPTKV-----EYLDGITIKMAALGAEHSLVISDGG- 193
+ GLG P++ +P K+ + D + + + GA H++++ DGG
Sbjct: 350 --ERGLG-LCPDVNFTEVEAGDDSVPRKISGGSSRFRDPVQV---SCGAAHTVLVVDGGY 403
Query: 194 EAFSWGMGVSGRLGHGHESS 213
+ +SWG G +G LG G+ S
Sbjct: 404 KLWSWGRGRNGVLGTGNVSD 423
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 117/259 (45%), Gaps = 49/259 (18%)
Query: 112 PLQVLG-HEKNIVHISAGYNHSCAVTVDGE-----------LYMWGKNTNGQLGLGKRAP 159
P +L H + ++ ++ G H A+ G+ LY WG N +GQLGLG
Sbjct: 188 PFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGES 247
Query: 160 NIVHLPTKVEYLD---GITIKMAALGAEHSLVISDGGEA-------FSWGMGVSGRLGH- 208
P VE + G+T+ A GA H+ +++ E +++G G +G+LGH
Sbjct: 248 RA--RPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHR 305
Query: 209 GHESSLLGFFKTYSEYTPRLIRDL-EGIKVKYVAAGMLSSACTDENGSVFIFG-ERGIDK 266
++SS L P + DL E + V G+ ++ G V+ +G ERG+
Sbjct: 306 SNKSSSL----------PEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWGMERGL-G 354
Query: 267 LCMK------ETSDATKPSLIS----KLPYSEEVSCGGYHTCVLTNSG-ELYTWGSNENG 315
LC E D + P IS + +VSCG HT ++ + G +L++WG NG
Sbjct: 355 LCPDVNFTEVEAGDDSVPRKISGGSSRFRDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNG 414
Query: 316 CLGIGSPEAIHLPEKVQGP 334
LG G+ ++P V P
Sbjct: 415 VLGTGNVSDCYVPTLVFWP 433
>AT3G03790.3 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-968011 FORWARD LENGTH=1099
Length = 1099
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 115/237 (48%), Gaps = 21/237 (8%)
Query: 136 TVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEA 195
+V E++ WG N QLG G + ++ +P +V+ L G IK+ + HS+ IS GE
Sbjct: 150 SVATEVFSWGNGANYQLGTGNQ--HVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEV 207
Query: 196 FSWGMGVSGRLGHGHESSLLGFFKTYS----EYTPR-LIRDLEGIKVKYVAAGMLSSACT 250
++WG G GRLGH F +S TPR +I L +VK VAA +
Sbjct: 208 YTWGFGRGGRLGHPE-------FDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIA 260
Query: 251 DENGSVFIFGERGIDKLCMKETSDATKPSLISKLPYS-EEVSCGGYHTCVLTNSGELYTW 309
E G V+ +G +L P ++ L VS HT V+++ GE++TW
Sbjct: 261 TEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLKAKIVAVSAANKHTAVVSDCGEVFTW 320
Query: 310 GSNENGCLGIGSPEAI--HLPEKVQGPFMKSSV-SQVSCGWKHTAAI-SEGRVFTWG 362
G N+ G LG G+ + + P V ++K V + ++ HT + ++G V+TWG
Sbjct: 321 GCNKEGQLGYGTSNSASNYSPRLVD--YLKGKVFTAIASSKYHTLVLRNDGEVYTWG 375
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 153/342 (44%), Gaps = 35/342 (10%)
Query: 40 WGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCGQ 99
WGNG + +LG G+ Q P + + ++ H++ ++ +G VY G G+
Sbjct: 158 WGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGR 217
Query: 100 LGTSESVNYS-----LEPLQVLG--HEKNIVHISAGYNHSCAVTVDGELYMWGKNTNGQL 152
LG E +S + P QV+ + + ++A +H+ T G++Y WG N GQL
Sbjct: 218 LGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQL 277
Query: 153 GLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGHES 212
G + + P KV L + ++A +H+ V+SD GE F+WG G+LG+G +
Sbjct: 278 GYT--SVDTQATPRKVTSLKAKIVAVSA-ANKHTAVVSDCGEVFTWGCNKEGQLGYGTSN 334
Query: 213 SLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGID--KLCMK 270
S S Y+PRL+ L+G +A+ + +G V+ +G R + ++ +
Sbjct: 335 S-------ASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWGHRLVTPRRVIIS 387
Query: 271 ETSDATKPSLIS---KLPYS-EEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPEAIH 326
+L++ + P ++ G H+ L G + W S+++ L ++H
Sbjct: 388 RNLKKAGNTLLNFHRRRPLRLTAIAAGMVHSLALAEDGAFFYWVSSDSN-LRCQQLHSLH 446
Query: 327 LPEKVQGPFMKSSVSQVSCGWKHTAAISEGRVFTWGWGGSNG 368
K+ VS + + +A S G V+ W G NG
Sbjct: 447 ---------GKTVVSISAGKYWASAVTSTGEVYM--WDGKNG 477
>AT3G03790.2 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-967857 FORWARD LENGTH=1081
Length = 1081
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 115/237 (48%), Gaps = 21/237 (8%)
Query: 136 TVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEA 195
+V E++ WG N QLG G + ++ +P +V+ L G IK+ + HS+ IS GE
Sbjct: 150 SVATEVFSWGNGANYQLGTGNQ--HVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEV 207
Query: 196 FSWGMGVSGRLGHGHESSLLGFFKTYS----EYTPR-LIRDLEGIKVKYVAAGMLSSACT 250
++WG G GRLGH F +S TPR +I L +VK VAA +
Sbjct: 208 YTWGFGRGGRLGHPE-------FDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIA 260
Query: 251 DENGSVFIFGERGIDKLCMKETSDATKPSLISKLPYS-EEVSCGGYHTCVLTNSGELYTW 309
E G V+ +G +L P ++ L VS HT V+++ GE++TW
Sbjct: 261 TEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSLKAKIVAVSAANKHTAVVSDCGEVFTW 320
Query: 310 GSNENGCLGIGSPEAI--HLPEKVQGPFMKSSV-SQVSCGWKHTAAI-SEGRVFTWG 362
G N+ G LG G+ + + P V ++K V + ++ HT + ++G V+TWG
Sbjct: 321 GCNKEGQLGYGTSNSASNYSPRLVD--YLKGKVFTAIASSKYHTLVLRNDGEVYTWG 375
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 153/342 (44%), Gaps = 35/342 (10%)
Query: 40 WGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCGQ 99
WGNG + +LG G+ Q P + + ++ H++ ++ +G VY G G+
Sbjct: 158 WGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGR 217
Query: 100 LGTSESVNYS-----LEPLQVLG--HEKNIVHISAGYNHSCAVTVDGELYMWGKNTNGQL 152
LG E +S + P QV+ + + ++A +H+ T G++Y WG N GQL
Sbjct: 218 LGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQL 277
Query: 153 GLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGHES 212
G + + P KV L + ++A +H+ V+SD GE F+WG G+LG+G +
Sbjct: 278 GYT--SVDTQATPRKVTSLKAKIVAVSA-ANKHTAVVSDCGEVFTWGCNKEGQLGYGTSN 334
Query: 213 SLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGID--KLCMK 270
S S Y+PRL+ L+G +A+ + +G V+ +G R + ++ +
Sbjct: 335 S-------ASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWGHRLVTPRRVIIS 387
Query: 271 ETSDATKPSLIS---KLPYS-EEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPEAIH 326
+L++ + P ++ G H+ L G + W S+++ L ++H
Sbjct: 388 RNLKKAGNTLLNFHRRRPLRLTAIAAGMVHSLALAEDGAFFYWVSSDSN-LRCQQLHSLH 446
Query: 327 LPEKVQGPFMKSSVSQVSCGWKHTAAISEGRVFTWGWGGSNG 368
K+ VS + + +A S G V+ W G NG
Sbjct: 447 ---------GKTVVSISAGKYWASAVTSTGEVYM--WDGKNG 477
>AT3G03790.1 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-967857 FORWARD LENGTH=1078
Length = 1078
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 113/233 (48%), Gaps = 21/233 (9%)
Query: 140 ELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWG 199
E++ WG N QLG G + ++ +P +V+ L G IK+ + HS+ IS GE ++WG
Sbjct: 151 EVFSWGNGANYQLGTGNQ--HVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWG 208
Query: 200 MGVSGRLGHGHESSLLGFFKTYS----EYTPR-LIRDLEGIKVKYVAAGMLSSACTDENG 254
G GRLGH F +S TPR +I L +VK VAA + E G
Sbjct: 209 FGRGGRLGHPE-------FDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGG 261
Query: 255 SVFIFGERGIDKLCMKETSDATKPSLISKLPYS-EEVSCGGYHTCVLTNSGELYTWGSNE 313
V+ +G +L P ++ L VS HT V+++ GE++TWG N+
Sbjct: 262 DVYTWGSNREGQLGYTSVDTQATPRKVTSLKAKIVAVSAANKHTAVVSDCGEVFTWGCNK 321
Query: 314 NGCLGIGSPEAI--HLPEKVQGPFMKSSV-SQVSCGWKHTAAI-SEGRVFTWG 362
G LG G+ + + P V ++K V + ++ HT + ++G V+TWG
Sbjct: 322 EGQLGYGTSNSASNYSPRLVD--YLKGKVFTAIASSKYHTLVLRNDGEVYTWG 372
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 153/342 (44%), Gaps = 35/342 (10%)
Query: 40 WGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCGQ 99
WGNG + +LG G+ Q P + + ++ H++ ++ +G VY G G+
Sbjct: 155 WGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGR 214
Query: 100 LGTSESVNYS-----LEPLQVLG--HEKNIVHISAGYNHSCAVTVDGELYMWGKNTNGQL 152
LG E +S + P QV+ + + ++A +H+ T G++Y WG N GQL
Sbjct: 215 LGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQL 274
Query: 153 GLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGHES 212
G + + P KV L + ++A +H+ V+SD GE F+WG G+LG+G +
Sbjct: 275 GYT--SVDTQATPRKVTSLKAKIVAVSA-ANKHTAVVSDCGEVFTWGCNKEGQLGYGTSN 331
Query: 213 SLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVFIFGERGID--KLCMK 270
S S Y+PRL+ L+G +A+ + +G V+ +G R + ++ +
Sbjct: 332 S-------ASNYSPRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTWGHRLVTPRRVIIS 384
Query: 271 ETSDATKPSLIS---KLPYS-EEVSCGGYHTCVLTNSGELYTWGSNENGCLGIGSPEAIH 326
+L++ + P ++ G H+ L G + W S+++ L ++H
Sbjct: 385 RNLKKAGNTLLNFHRRRPLRLTAIAAGMVHSLALAEDGAFFYWVSSDSN-LRCQQLHSLH 443
Query: 327 LPEKVQGPFMKSSVSQVSCGWKHTAAISEGRVFTWGWGGSNG 368
K+ VS + + +A S G V+ W G NG
Sbjct: 444 ---------GKTVVSISAGKYWASAVTSTGEVYM--WDGKNG 474
>AT3G02300.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:461551-463929 FORWARD
LENGTH=471
Length = 471
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 137/322 (42%), Gaps = 74/322 (22%)
Query: 132 SCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKV-------------EYLDGITIKM 178
S ++ +Y+WG N +GQ G ++ ++ +P ++ +LD
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGRNEQE-KLLRIPKQLPPELFGCPAGANSRWLD------ 65
Query: 179 AALGAEHSLVISDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVK 238
+ G EH+ ++ G F+WG G+LG G E P+ ++ L+ VK
Sbjct: 66 ISCGREHTAAVASDGSLFAWGANEYGQLGDGTE---------VGRKHPKKVKQLQSEFVK 116
Query: 239 YVAAGMLSSACTDE---------NGSVFIFGERGIDKLCMKETSDATKPSLIS-KLPYS- 287
+V+ G +A E ++++G+ L P L S P +
Sbjct: 117 FVSCGAFCTAAIAEPRENDGTLSTSRLWVWGQNQGSNL----------PRLFSGAFPATT 166
Query: 288 --EEVSCGGYHTCVLTNSGELYTWGSNENGCLGIG-SPEAIHLPEKVQ--GPFMKSS--- 339
+VSCG H L+ G L WG NE G LG G + E + P + F+ +
Sbjct: 167 AIRQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPEL 226
Query: 340 --VSQVSCGWKHTAAISE-GRVFTWGWG--GSNGTFSVDXXXXXXXXXXXXDVDYICPAR 394
+ Q+SCG HTAA+S+ G V+TWG G G G S+ D + I P R
Sbjct: 227 VKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQ----------SGDKELI-PRR 275
Query: 395 VCFGEDVNALQVSCGFNHTGAI 416
V + V+ +V+CG HT A+
Sbjct: 276 VVGLDGVSMKEVACGGVHTCAL 297
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 148/371 (39%), Gaps = 48/371 (12%)
Query: 28 SSTQPGKRFAALWGNGDHGRLG------LGSLESQWRPAV--CSAFLNHSPQAIACGGAH 79
S + P K +WG G+ G L + Q P + C A N I+CG H
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREH 72
Query: 80 TLFLTDNGCVYAAGLNDCGQLGTSESVNYSLEPLQVLGHEKNIVH-ISAGYNHSCAVTVD 138
T + +G ++A G N+ GQLG V P +V + V +S G + A+
Sbjct: 73 TAAVASDGSLFAWGANEYGQLGDGTEVGRK-HPKKVKQLQSEFVKFVSCGAFCTAAIAEP 131
Query: 139 GE---------LYMWGKNTNGQLGLGKRAPNIVH--LPTKVEYLDGITIKMAALGAEHSL 187
E L++WG+N G P + P I+ + G H +
Sbjct: 132 RENDGTLSTSRLWVWGQNQ------GSNLPRLFSGAFPATT------AIRQVSCGTAHVV 179
Query: 188 VISDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGMLSS 247
+S+ G +WG G+LG G L + + Y L E +K+ ++ G +
Sbjct: 180 ALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHT 239
Query: 248 ACTDENGSVFIFGERGIDKL---CMKETSDATKPSLISKLP--YSEEVSCGGYHTCVLTN 302
A + G V+ +G + +L ++ P + L +EV+CGG HTC L+
Sbjct: 240 AALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSL 299
Query: 303 SGELYTWGSN---------ENGCLGIGSPEAIHLPEKVQGPFMKSSVSQVSCGWKHTAA- 352
G LY WG ++G S + L V + + V V+CG HT
Sbjct: 300 EGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTDVRLVACGHSHTLVY 359
Query: 353 ISEGRVFTWGW 363
+ EGR+ WG+
Sbjct: 360 MREGRICGWGY 370
>AT1G19880.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr1:6900648-6903818 REVERSE
LENGTH=538
Length = 538
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 139/342 (40%), Gaps = 46/342 (13%)
Query: 40 WGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCGQ 99
WG + G+LG G + + RP V S H A G HT+ ++D+G G N GQ
Sbjct: 82 WGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQ 141
Query: 100 LGTSESVN--YSLE----PLQ-VLGHEKNIVHISAGYNHSCAVTVDGELYMWGKNTNGQL 152
LG + N S+E PL V+ E V A + + T + G GQL
Sbjct: 142 LGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQL 201
Query: 153 GLG------------KRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVISDGGEAFSWGM 200
G G + A P + L G TI A G H++ + G ++WG
Sbjct: 202 GHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGF 261
Query: 201 GVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKV----KYVAAGMLSSACTDENGSV 256
G GRLGH + E+ PR I + V ++AG +SACT G +
Sbjct: 262 GGYGRLGHREQK---------DEWAPRRIDVFQRNNVLPPNAILSAGSANSACTAGGGQL 312
Query: 257 FIFGE---RGIDKLCMKETSDATKPSLISKLPYSEEVSCGGYHTCVLTNSGELYTWGSNE 313
+++G+ G D + K D + +L + G H V +S +WG +
Sbjct: 313 YMWGKIKNNGDDWMYPKPMMDLSGWNL-------RWMDSGSMHHFVGADS-SCISWGHAQ 364
Query: 314 NGCLGIGS--PEAIHLPEKVQGPFMKSSVSQVSCGWKHTAAI 353
G LG G ++ P+KV V V+CG+ H+ I
Sbjct: 365 YGELGYGPNGQKSSAAPKKVD-MLEGMHVMGVACGFCHSMVI 405
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 34/263 (12%)
Query: 131 HSCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVIS 190
H A+ V+G Y WG+N GQLG G PT V L I AA G H++V+S
Sbjct: 69 HCVALDVEGRCYTWGRNEKGQLGHGDMIQR--DRPTVVSGLSKHKIVKAAAGRNHTVVVS 126
Query: 191 DGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPR--LIRDLEGIKVKYVAAGMLSSA 248
D G++ +G G+LG G S+ GF E TP ++ D +V VA G +
Sbjct: 127 DDGQSLGFGWNKYGQLGLG--SAKNGFVSVEVESTPLPCVVSD----EVTNVACGADFTV 180
Query: 249 --CTDENGSVFI-----FGERG---IDKLCMKETS------DATKPSLISKLPYSE--EV 290
+ E S+ +G+ G ++ MK++S +P I+ L +V
Sbjct: 181 WLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKV 240
Query: 291 SCGGYHTCVLTNSGELYTWGSNENGCLGIGSPEAIHLPEKVQGPFMKSSV----SQVSCG 346
+CG HT + +G +YTWG G LG + P ++ F +++V + +S G
Sbjct: 241 ACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRID-VFQRNNVLPPNAILSAG 299
Query: 347 WKHTAAIS-EGRVFTWGWGGSNG 368
++A + G+++ WG +NG
Sbjct: 300 SANSACTAGGGQLYMWGKIKNNG 322
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 71/190 (37%), Gaps = 51/190 (26%)
Query: 52 SLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCGQLGTSESVNYSLE 111
+ E+Q RP ++ + +ACG HT+ + NG VY G G+LG E +
Sbjct: 219 AYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKD-EWA 277
Query: 112 PLQVLGHEKNIVH-----ISAGYNHSCAVTVDGELYMWGK-------------------- 146
P ++ ++N V +SAG +S G+LYMWGK
Sbjct: 278 PRRIDVFQRNNVLPPNAILSAGSANSACTAGGGQLYMWGKIKNNGDDWMYPKPMMDLSGW 337
Query: 147 -------------------------NTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAAL 181
G+LG G P KV+ L+G+ + A
Sbjct: 338 NLRWMDSGSMHHFVGADSSCISWGHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMGVAC 397
Query: 182 GAEHSLVISD 191
G HS+VI D
Sbjct: 398 GFCHSMVIVD 407
>AT5G60870.3 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487257 REVERSE
LENGTH=276
Length = 276
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 17/195 (8%)
Query: 72 AIACGGAHTLFLTDNGCVYAAGLNDCGQLGTSESVNYSLE------PLQVLGHEKNIVHI 125
AIA G HT +T++G +Y G + E P +V + +
Sbjct: 39 AIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASV 98
Query: 126 SAGYNHSCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEH 185
S G + A+T +G+L+ WG N+N +LG G +P V L+G+ I A G H
Sbjct: 99 SCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMP--VPSLEGVRITQIACGGYH 156
Query: 186 SLVISDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGIKVKYVAAGML 245
SL +++ G+ SWG G GHG LG ++ P I L K+ ++A+G
Sbjct: 157 SLALTEEGKVLSWGHG-----GHGQ----LGSSSLRNQKVPTEIEALADKKIVFIASGGS 207
Query: 246 SSACTDENGSVFIFG 260
SSA + G ++++G
Sbjct: 208 SSAAITDGGELWMWG 222
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Query: 40 WGNGDHGRLGLGSLESQWRPAVCSAFLNHSPQAIACGGAHTLFLTDNGCVYAAGLNDCGQ 99
WG + LG G W P + IACGG H+L LT+ G V + G GQ
Sbjct: 117 WGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQ 176
Query: 100 LGTSESVNYSLEPLQVLGHEKNIVHISAGYNHSCAVTVDGELYMWGKNTNGQLGLGKRAP 159
LG+S N + +K IV I++G + S A+T GEL+MWG + QLG+ P
Sbjct: 177 LGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGV-PGLP 235
Query: 160 NIVHLPTKVEYL 171
I P +V +L
Sbjct: 236 EIQTTPVEVNFL 247
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 18/220 (8%)
Query: 121 NIVHISAGYNHSCAVTVDGELYMWGKNTNGQLGLGKRAPNI-----VHLPTKVEYLDGIT 175
I I+ H+ A+T GELYMWG+ + +P+KV+ L +
Sbjct: 36 KISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VP 94
Query: 176 IKMAALGAEHSLVISDGGEAFSWGMGVSGRLGHGHESSLLGFFKTYSEYTPRLIRDLEGI 235
+ + G ++ ++ G+ ++WG + LG G + P + LEG+
Sbjct: 95 VASVSCGGFFTMALTKEGQLWNWGANSNYELGRG---------DNLGGWEPMPVPSLEGV 145
Query: 236 KVKYVAAGMLSSACTDENGSVFIFGERGIDKLCMKETSDATKPSLISKLPYSEEV--SCG 293
++ +A G S E G V +G G +L + P+ I L + V + G
Sbjct: 146 RITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASG 205
Query: 294 GYHTCVLTNSGELYTWGSNENGCLGI-GSPEAIHLPEKVQ 332
G + +T+ GEL+ WG+ ++ LG+ G PE P +V
Sbjct: 206 GSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVN 245
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 23/178 (12%)
Query: 199 GMGVSGRLGHGHESSLLGFFKTYS-EYTPRLIRDLEGIKVKYVAAGMLSSACTDENGSVF 257
G G G LGH K Y+ E PR + D K+ +A +A E+G ++
Sbjct: 8 GYGGFGALGH----------KVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELY 57
Query: 258 IFGERGID-------KLCMKETSDATKPSLISKLPYS-EEVSCGGYHTCVLTNSGELYTW 309
++G D E + PS + L VSCGG+ T LT G+L+ W
Sbjct: 58 MWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNW 117
Query: 310 GSNENGCLGIGSPEAIHLPEKVQGPFMKS-SVSQVSCGWKHTAAIS-EGRVFTWGWGG 365
G+N N LG G P V P ++ ++Q++CG H+ A++ EG+V +WG GG
Sbjct: 118 GANSNYELGRGDNLGGWEPMPV--PSLEGVRITQIACGGYHSLALTEEGKVLSWGHGG 173
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 72 AIACGGAHTLFLTDNGCVYAAGLNDCGQLGTSESVNYSLEPLQVLGHEK-NIVHISAGYN 130
+++CGG T+ LT G ++ G N +LG +++ EP+ V E I I+ G
Sbjct: 97 SVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLG-GWEPMPVPSLEGVRITQIACGGY 155
Query: 131 HSCAVTVDGELYMWGKNTNGQLGLGKRAPNIVHLPTKVEYLDGITIKMAALGAEHSLVIS 190
HS A+T +G++ WG +GQLG V PT++E L I A G S I+
Sbjct: 156 HSLALTEEGKVLSWGHGGHGQLGSSSLRNQKV--PTEIEALADKKIVFIASGGSSSAAIT 213
Query: 191 DGGEAFSWGMGVSGRLG 207
DGGE + WG +LG
Sbjct: 214 DGGELWMWGNAKDFQLG 230