Miyakogusa Predicted Gene
- Lj1g3v1357920.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1357920.1 Non Chatacterized Hit- tr|A5AVN6|A5AVN6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,38.32,0.00000000000001,seg,NULL; Chaperone J-domain,Heat shock
protein DnaJ, N-terminal; coiled-coil,NULL; SUBFAMILY NOT
NA,CUFF.27163.1
(824 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G12770.2 | Symbols: | Chaperone DnaJ-domain superfamily prot... 128 2e-29
AT4G12770.1 | Symbols: | Chaperone DnaJ-domain superfamily prot... 128 2e-29
AT4G12780.1 | Symbols: | Chaperone DnaJ-domain superfamily prot... 123 5e-28
AT1G21660.1 | Symbols: | Chaperone DnaJ-domain superfamily prot... 116 8e-26
AT4G12780.2 | Symbols: | Chaperone DnaJ-domain superfamily prot... 113 6e-25
AT4G36520.1 | Symbols: | Chaperone DnaJ-domain superfamily prot... 105 1e-22
AT1G75310.1 | Symbols: AUL1 | auxin-like 1 protein | chr1:282610... 100 8e-21
>AT4G12770.2 | Symbols: | Chaperone DnaJ-domain superfamily protein
| chr4:7506736-7511408 REVERSE LENGTH=889
Length = 889
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 143/479 (29%), Positives = 203/479 (42%), Gaps = 114/479 (23%)
Query: 71 PVYDD-DIFDGVPGLRT-SSSSKLPSYDDVFASPG---------EATAFDDLLGG-FGQS 118
PVYDD D+F+ +P L+ S+SS+ +++VF+S ++ FDDL+G G+
Sbjct: 117 PVYDDEDVFESIPELKIPSTSSQSARFENVFSSISSSPTKHRKQNSSPFDDLMGNNLGKK 176
Query: 119 KSSRKELHXXXXXXXXXXXXLIPGFGXXXXXXXXXXXXRPSPDIGFSSESTVNASK---- 174
+S R+E LIPGFG P +SE+T + K
Sbjct: 177 ESDREE------KGSSIFDDLIPGFGRTSSP----------PAKRTTSETTSQSQKPPYR 220
Query: 175 ---MASSAMEDPFKVFESASAPI-DSSSGHFTDPLDEISKFTSSRSTRNDKSSNSNGVVY 230
+S+ EDPF V E +++ + + S+G FTDPL+EI KF S R S+ +G V+
Sbjct: 221 TAETSSNVKEDPFVVLEESTSTLREPSTGGFTDPLEEIGKFNS----RKTDHSSVHGGVF 276
Query: 231 DDTDHFDVLGNSVPAFXXXXXXXXXXXXXXXXXXXXXXWTGDKESFDKSSVRSPETQTQN 290
DTD D LG S P D S KS +R P + +
Sbjct: 277 VDTDPLDSLGKSGP---------------------------DMNSRGKSHLRPPGNISGS 309
Query: 291 KIPVEHDQEFHQAPYDMPTYSTDSTQPAGQRSTSPSYDDDGLRHVNTQADMSPRYEENLN 350
+ PVE +H S D ST P + DG +
Sbjct: 310 QSPVESSGLYHSK-----NVSFDDVVEPQNTSTPPPTNSDG----------------SFE 348
Query: 351 SNDDIWLVVSEIPLFTQXXXXXXXXXXXXXXXVHIPKSGTSSSASANARKKDNEFSSFPS 410
S+DD+WL VSEIPLFTQ + +KK NE S P+
Sbjct: 349 SSDDVWLTVSEIPLFTQPTSAPPP------------TRPPPPRPTRPIKKKVNE-PSIPT 395
Query: 411 STRFSQNPKSAPAATKFSSASQFDEVEDFAMGKSHCNDTQHGNGLPD----EEIEMNSXX 466
S S P S A+ +ASQ DE++DF++G++ NG PD E+ ++ S
Sbjct: 396 SAYHSHVPSSGRASVNSPTASQMDELDDFSIGRNQT----AANGYPDPSSGEDSDVFSTA 451
Query: 467 XXXXXXXX----XXXXXLRHAKEVRERENTKAARSKEHVQVES-DSAEPEERGNKEWLD 520
RHAKE RE+E+ KA+RS+E E+ DS E E R + LD
Sbjct: 452 AASAAAMKDAMDKAEAKFRHAKERREKESLKASRSREGDHTENYDSRERELREKQVRLD 510
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/97 (76%), Positives = 83/97 (85%), Gaps = 1/97 (1%)
Query: 728 NIVDDLSSIFGASPSPREFQEVEGESEERRKARLERLQRAQERAAKALDEKNQRDLQTQR 787
NIVDDLSSIFGAS S FQ+V+GE+EERR+ARLER QR QERAAKAL EKN+RDLQ QR
Sbjct: 724 NIVDDLSSIFGASQS-GGFQDVDGETEERRRARLERHQRTQERAAKALAEKNERDLQVQR 782
Query: 788 EQAERHRLAETLDFEVKRWAAGKEANLRALLSTLQYV 824
EQAE+ R+ TLD E++RW AGKE NLRALLSTLQYV
Sbjct: 783 EQAEKDRIGGTLDVEIRRWGAGKEGNLRALLSTLQYV 819
>AT4G12770.1 | Symbols: | Chaperone DnaJ-domain superfamily protein
| chr4:7506736-7511408 REVERSE LENGTH=891
Length = 891
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 143/479 (29%), Positives = 203/479 (42%), Gaps = 114/479 (23%)
Query: 71 PVYDD-DIFDGVPGLRT-SSSSKLPSYDDVFASPG---------EATAFDDLLGG-FGQS 118
PVYDD D+F+ +P L+ S+SS+ +++VF+S ++ FDDL+G G+
Sbjct: 117 PVYDDEDVFESIPELKIPSTSSQSARFENVFSSISSSPTKHRKQNSSPFDDLMGNNLGKK 176
Query: 119 KSSRKELHXXXXXXXXXXXXLIPGFGXXXXXXXXXXXXRPSPDIGFSSESTVNASK---- 174
+S R+E LIPGFG P +SE+T + K
Sbjct: 177 ESDREE------KGSSIFDDLIPGFGRTSS----------PPAKRTTSETTSQSQKPPYR 220
Query: 175 ---MASSAMEDPFKVFESASAPI-DSSSGHFTDPLDEISKFTSSRSTRNDKSSNSNGVVY 230
+S+ EDPF V E +++ + + S+G FTDPL+EI KF S R S+ +G V+
Sbjct: 221 TAETSSNVKEDPFVVLEESTSTLREPSTGGFTDPLEEIGKFNS----RKTDHSSVHGGVF 276
Query: 231 DDTDHFDVLGNSVPAFXXXXXXXXXXXXXXXXXXXXXXWTGDKESFDKSSVRSPETQTQN 290
DTD D LG S P D S KS +R P + +
Sbjct: 277 VDTDPLDSLGKSGP---------------------------DMNSRGKSHLRPPGNISGS 309
Query: 291 KIPVEHDQEFHQAPYDMPTYSTDSTQPAGQRSTSPSYDDDGLRHVNTQADMSPRYEENLN 350
+ PVE +H S D ST P + DG +
Sbjct: 310 QSPVESSGLYHSK-----NVSFDDVVEPQNTSTPPPTNSDG----------------SFE 348
Query: 351 SNDDIWLVVSEIPLFTQXXXXXXXXXXXXXXXVHIPKSGTSSSASANARKKDNEFSSFPS 410
S+DD+WL VSEIPLFTQ + +KK NE S P+
Sbjct: 349 SSDDVWLTVSEIPLFTQPTSAPPP------------TRPPPPRPTRPIKKKVNE-PSIPT 395
Query: 411 STRFSQNPKSAPAATKFSSASQFDEVEDFAMGKSHCNDTQHGNGLPD----EEIEMNSXX 466
S S P S A+ +ASQ DE++DF++G++ NG PD E+ ++ S
Sbjct: 396 SAYHSHVPSSGRASVNSPTASQMDELDDFSIGRNQT----AANGYPDPSSGEDSDVFSTA 451
Query: 467 XXXXXXXX----XXXXXLRHAKEVRERENTKAARSKEHVQVES-DSAEPEERGNKEWLD 520
RHAKE RE+E+ KA+RS+E E+ DS E E R + LD
Sbjct: 452 AASAAAMKDAMDKAEAKFRHAKERREKESLKASRSREGDHTENYDSRERELREKQVRLD 510
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/98 (74%), Positives = 82/98 (83%), Gaps = 1/98 (1%)
Query: 728 NIVDDLSSIFGASPSPRE-FQEVEGESEERRKARLERLQRAQERAAKALDEKNQRDLQTQ 786
NIVDDLSSIFGA S FQ+V+GE+EERR+ARLER QR QERAAKAL EKN+RDLQ Q
Sbjct: 724 NIVDDLSSIFGAPASQSGGFQDVDGETEERRRARLERHQRTQERAAKALAEKNERDLQVQ 783
Query: 787 REQAERHRLAETLDFEVKRWAAGKEANLRALLSTLQYV 824
REQAE+ R+ TLD E++RW AGKE NLRALLSTLQYV
Sbjct: 784 REQAEKDRIGGTLDVEIRRWGAGKEGNLRALLSTLQYV 821
>AT4G12780.1 | Symbols: | Chaperone DnaJ-domain superfamily protein
| chr4:7512200-7516655 FORWARD LENGTH=904
Length = 904
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/98 (75%), Positives = 82/98 (83%), Gaps = 1/98 (1%)
Query: 728 NIVDDLSSIFGASPSPRE-FQEVEGESEERRKARLERLQRAQERAAKALDEKNQRDLQTQ 786
NIVDDLSSIFGAS S FQ+V+GE+EERR+ARLER QR QERAAKAL EKN+RDLQ Q
Sbjct: 737 NIVDDLSSIFGASASQSGGFQDVDGETEERRRARLERHQRTQERAAKALAEKNERDLQVQ 796
Query: 787 REQAERHRLAETLDFEVKRWAAGKEANLRALLSTLQYV 824
REQ E+ R+ TLD E+KRW AGKE NLRALLSTLQYV
Sbjct: 797 REQVEKDRIGVTLDVEIKRWGAGKEGNLRALLSTLQYV 834
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 149/508 (29%), Positives = 209/508 (41%), Gaps = 131/508 (25%)
Query: 55 PSADLDSVFR---AKSV------NFPVYDD-DIFDGVPGLRT-SSSSKLPSYDDVFASPG 103
P+ D D++F+ +KS + PVYDD D+F+ +P L+ S+SS+ +++VF+S
Sbjct: 94 PAFDYDAMFKEPKSKSASSMPVYDKPVYDDEDVFESIPELKIPSTSSQSARFENVFSSIS 153
Query: 104 ---------EATAFDDLLG---GFGQSKSSRKELHXXXXXXXXXXXXLIPGFGXXXXXXX 151
++ FDDL+G G + S R+E LIPGFG
Sbjct: 154 SSPTKHRKQNSSPFDDLMGNNLGKKGADSDREE------KGSSIFDDLIPGFGRTS---- 203
Query: 152 XXXXXRPSPDIGFSSESTVNASKMA--------SSAMEDPFKVFE-SASAPIDSSSGHFT 202
SP ++ T N S+ A S+ EDPF V E S S P + S T
Sbjct: 204 -------SPPSKRTTSETTNQSEKAPYRTAETSSNVEEDPFVVLEESESTPREPSR---T 253
Query: 203 DPLDEISKFTSSRSTRNDKSSNSNGVVYDDTDHFDVLGNSVPAFXXXXXXXXXXXXXXXX 262
DPLD+I KF S R S+ +G V+ D D D LG P
Sbjct: 254 DPLDDIGKFNS----RKTDHSSVHGGVFVDIDPLDNLGKPGP------------------ 291
Query: 263 XXXXXXWTGDKESFDKSSVRSPETQTQNK-IPVEHDQEFHQAPYDMPTYSTDSTQPAGQR 321
D S KS +R P + ++ PVE +H D +P
Sbjct: 292 ---------DMNSKGKSHLRPPGNISGSQSPPVESPGSYHSKKVSF----EDFLEPHNM- 337
Query: 322 STSPSYDDDGLRHVNTQADMSPRYEENLNSNDDIWLVVSEIPLFTQXXXXXXXXXXXXXX 381
ST P + +G + S+DD+WL VSEIPLFTQ
Sbjct: 338 STPPPTNSNG----------------SFESSDDVWLTVSEIPLFTQPTSAPPP------- 374
Query: 382 XVHIPKSGTSSSASANARKKDNEFSSFPSSTRFSQNPKSAPAATKFSSASQFDEVEDFAM 441
+ +KK NE S P+S S P S A+ +ASQ DE++DF++
Sbjct: 375 -----TRPPPPRPTRPIKKKVNE-PSIPTSAYHSHVPSSGRASVNSPTASQMDELDDFSI 428
Query: 442 GKSHCNDTQHGNGLPD----EEIEMNSXXXXXXXXXX----XXXXXLRHAKEVRERENTK 493
G++ NG PD E+ ++ S RHAKE RE+EN K
Sbjct: 429 GRNQT----AANGYPDPSSGEDSDVFSTAAASAAAMKDAMDKAEAKFRHAKERREKENLK 484
Query: 494 AARSKEHVQVES-DSAEPEERGNKEWLD 520
A+RS+E E+ DS E E R + LD
Sbjct: 485 ASRSREGDHTENYDSRERELREKQVRLD 512
>AT1G21660.1 | Symbols: | Chaperone DnaJ-domain superfamily protein
| chr1:7605924-7608835 FORWARD LENGTH=523
Length = 523
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 74/97 (76%)
Query: 728 NIVDDLSSIFGASPSPREFQEVEGESEERRKARLERLQRAQERAAKALDEKNQRDLQTQR 787
N+VDD S++FG P R+F+E+ GESEERRKAR +R QR + R A+A+ + N RD Q++
Sbjct: 357 NLVDDFSALFGEDPIFRQFEEIPGESEERRKARWDREQRTKSRVAQAVADMNNRDHQSRI 416
Query: 788 EQAERHRLAETLDFEVKRWAAGKEANLRALLSTLQYV 824
EQ +R R++ET+D E++RWA GKE N+RALLS+L V
Sbjct: 417 EQEQRTRISETVDTEIRRWATGKEGNMRALLSSLHIV 453
>AT4G12780.2 | Symbols: | Chaperone DnaJ-domain superfamily protein
| chr4:7512200-7516655 FORWARD LENGTH=894
Length = 894
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/115 (66%), Positives = 83/115 (72%), Gaps = 18/115 (15%)
Query: 728 NIVDDLSSIFGASPSPRE-FQEVEGESEERRKARLERLQRAQERAAKALDEKNQRDLQTQ 786
NIVDDLSSIFGAS S FQ+V+GE+EERR+ARLER QR QERAAKAL EKN+RDLQ Q
Sbjct: 710 NIVDDLSSIFGASASQSGGFQDVDGETEERRRARLERHQRTQERAAKALAEKNERDLQVQ 769
Query: 787 REQAE------RH-----------RLAETLDFEVKRWAAGKEANLRALLSTLQYV 824
REQ E RH R+ TLD E+KRW AGKE NLRALLSTLQYV
Sbjct: 770 REQVEKDNKKLRHLSILSHCFFPFRIGVTLDVEIKRWGAGKEGNLRALLSTLQYV 824
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 83/182 (45%), Gaps = 26/182 (14%)
Query: 348 NLNSNDDIWLVVSEIPLFTQXXXXXXXXXXXXXXXVHIPKSGTSSSASANARKKDNEFSS 407
+ S+DD+WL VSEIPLFTQ + +KK NE S
Sbjct: 321 SFESSDDVWLTVSEIPLFTQPTSAPPP------------TRPPPPRPTRPIKKKVNE-PS 367
Query: 408 FPSSTRFSQNPKSAPAATKFSSASQFDEVEDFAMGKSHCNDTQHGNGLPD----EEIEMN 463
P+S S P S A+ +ASQ DE++DF++G++ NG PD E+ ++
Sbjct: 368 IPTSAYHSHVPSSGRASVNSPTASQMDELDDFSIGRNQT----AANGYPDPSSGEDSDVF 423
Query: 464 SXXXXXXXXXX----XXXXXLRHAKEVRERENTKAARSKEHVQVES-DSAEPEERGNKEW 518
S RHAKE RE+EN KA+RS+E E+ DS E E R +
Sbjct: 424 STAAASAAAMKDAMDKAEAKFRHAKERREKENLKASRSREGDHTENYDSRERELREKQVR 483
Query: 519 LD 520
LD
Sbjct: 484 LD 485
>AT4G36520.1 | Symbols: | Chaperone DnaJ-domain superfamily protein |
chr4:17230589-17235435 REVERSE LENGTH=1422
Length = 1422
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 68/91 (74%), Gaps = 7/91 (7%)
Query: 737 FGASPSPREFQE---VEGESEERRKARLERLQRAQERAAKALDEKNQRDLQTQREQAERH 793
FGAS +Q+ EGES +R +RLER QR +R AKAL EKN RDL QREQAER
Sbjct: 1267 FGAS----RYQDSHGTEGESPQRYTSRLERHQRTADRVAKALAEKNMRDLVAQREQAERI 1322
Query: 794 RLAETLDFEVKRWAAGKEANLRALLSTLQYV 824
R+AETLD EVKRW++GKE N+RALLSTLQY+
Sbjct: 1323 RIAETLDTEVKRWSSGKEGNIRALLSTLQYI 1353
>AT1G75310.1 | Symbols: AUL1 | auxin-like 1 protein |
chr1:28261004-28266124 FORWARD LENGTH=1448
Length = 1448
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 60/74 (81%)
Query: 751 GESEERRKARLERLQRAQERAAKALDEKNQRDLQTQREQAERHRLAETLDFEVKRWAAGK 810
GE +R KAR ER QR +RAA+AL EK RDL+TQ+EQ ER+RLAE LD +VKRW++GK
Sbjct: 1306 GEPIQRCKARSERHQRTSDRAAEALAEKKLRDLKTQKEQTERNRLAEALDADVKRWSSGK 1365
Query: 811 EANLRALLSTLQYV 824
E NLRAL+STLQY+
Sbjct: 1366 ENNLRALISTLQYI 1379