Miyakogusa Predicted Gene
- Lj1g3v1329370.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1329370.1 Non Chatacterized Hit- tr|I1KBK0|I1KBK0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,72.91,0,U-box,U box
domain; SUBFAMILY NOT NAMED,NULL; WDSAM1 PROTEIN,NULL; no
description,Zinc finger, RING/,CUFF.27127.1
(406 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G19380.1 | Symbols: PUB25 | plant U-box 25 | chr3:6714602-671... 159 4e-39
AT1G49780.1 | Symbols: PUB26 | plant U-box 26 | chr1:18429024-18... 133 2e-31
AT3G49810.1 | Symbols: | ARM repeat superfamily protein | chr3:... 118 8e-27
AT3G52450.1 | Symbols: PUB22 | plant U-box 22 | chr3:19440943-19... 112 3e-25
AT2G35930.1 | Symbols: PUB23 | plant U-box 23 | chr2:15083101-15... 112 3e-25
AT5G09800.1 | Symbols: | ARM repeat superfamily protein | chr5:... 112 4e-25
AT5G65920.1 | Symbols: | ARM repeat superfamily protein | chr5:... 107 2e-23
AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY p... 105 8e-23
AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 | chr3:64... 103 2e-22
AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1:... 97 2e-20
AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1:... 96 5e-20
AT1G71020.2 | Symbols: | ARM repeat superfamily protein | chr1:... 96 6e-20
AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:10... 94 2e-19
AT5G37490.1 | Symbols: | ARM repeat superfamily protein | chr5:... 93 3e-19
AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 | chr4:11356143... 91 1e-18
AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 90 4e-18
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 89 7e-18
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20... 87 1e-17
AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16... 85 1e-16
AT3G54790.2 | Symbols: | ARM repeat superfamily protein | chr3:... 85 1e-16
AT3G54790.1 | Symbols: | ARM repeat superfamily protein | chr3:... 84 1e-16
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12... 84 1e-16
AT5G01830.1 | Symbols: | ARM repeat superfamily protein | chr5:... 84 2e-16
AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23548... 81 1e-15
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97... 79 5e-15
AT3G11840.1 | Symbols: PUB24 | plant U-box 24 | chr3:3736578-373... 79 6e-15
AT1G67530.2 | Symbols: | ARM repeat superfamily protein | chr1:... 79 6e-15
AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1:... 79 6e-15
AT1G60190.1 | Symbols: | ARM repeat superfamily protein | chr1:... 77 2e-14
AT1G24330.1 | Symbols: | ARM repeat superfamily protein | chr1:... 77 2e-14
AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 | chr1:34... 75 6e-14
AT2G45920.1 | Symbols: | U-box domain-containing protein | chr2... 72 6e-13
AT4G36550.1 | Symbols: | ARM repeat superfamily protein | chr4:... 71 1e-12
AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 | chr1:24... 70 3e-12
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 69 4e-12
AT1G01660.1 | Symbols: | RING/U-box superfamily protein | chr1:... 69 5e-12
AT3G61390.2 | Symbols: | RING/U-box superfamily protein | chr3:... 69 7e-12
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 69 7e-12
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 69 8e-12
AT5G18340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 67 2e-11
AT1G01670.1 | Symbols: | RING/U-box superfamily protein | chr1:... 64 3e-10
AT5G65500.1 | Symbols: | U-box domain-containing protein kinase... 63 3e-10
AT5G57035.1 | Symbols: | U-box domain-containing protein kinase... 62 6e-10
AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |... 61 2e-09
AT2G45910.1 | Symbols: | U-box domain-containing protein kinase... 60 2e-09
AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 60 2e-09
AT4G25160.1 | Symbols: | U-box domain-containing protein kinase... 60 3e-09
AT5G51270.1 | Symbols: | U-box domain-containing protein kinase... 59 4e-09
AT2G19410.1 | Symbols: | U-box domain-containing protein kinase... 59 5e-09
AT3G49060.2 | Symbols: | U-box domain-containing protein kinase... 59 7e-09
AT3G49060.1 | Symbols: | U-box domain-containing protein kinase... 59 7e-09
AT1G76390.2 | Symbols: | ARM repeat superfamily protein | chr1:... 57 2e-08
AT1G76390.1 | Symbols: | ARM repeat superfamily protein | chr1:... 57 2e-08
AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 | senescence-associ... 56 4e-08
AT5G61560.2 | Symbols: | U-box domain-containing protein kinase... 54 1e-07
AT5G61560.1 | Symbols: | U-box domain-containing protein kinase... 54 1e-07
AT5G18320.1 | Symbols: | ARM repeat superfamily protein | chr5:... 54 2e-07
AT5G18330.1 | Symbols: | ARM repeat superfamily protein | chr5:... 54 2e-07
AT4G16490.1 | Symbols: | ARM repeat superfamily protein | chr4:... 53 4e-07
AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat fam... 51 2e-06
AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat fam... 51 2e-06
AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat fam... 51 2e-06
AT5G61550.1 | Symbols: | U-box domain-containing protein kinase... 50 2e-06
AT5G61550.2 | Symbols: | U-box domain-containing protein kinase... 50 2e-06
>AT3G19380.1 | Symbols: PUB25 | plant U-box 25 |
chr3:6714602-6715867 REVERSE LENGTH=421
Length = 421
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 188/385 (48%), Gaps = 28/385 (7%)
Query: 8 ITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAG-NLTCPVTMQKLHDPSIVPN 66
I IP+ FRCPISL+L +DPVT+CTG TYDR+SIE W+S G N TCPVT L D +++PN
Sbjct: 12 IQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPN 71
Query: 67 HTLRHLIDQWL---------QLGLQFDPGNSASIDYLASLKHNLESPEATLQSKLQALEK 117
HTLR LI +W ++ P + S+ L S + +++S+ AL +
Sbjct: 72 HTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALRR 131
Query: 118 IRVLSDEYCSFKKTCFHQXXXXXXXXXXVFGKEDATSSPSKNHMEFAEVALSCIVKLLPL 177
+R + + S K + E +S E +L+ +V +LP+
Sbjct: 132 LRGFARD--SDKNRVLIAAHNATEILIKILFSETTSS-------ELVSESLALLV-MLPI 181
Query: 178 VSLEP---LNMIKDESKLATFLQLLEKGTSSIKTSLCQVIESTAAISQTDGVHHILGNSH 234
EP +++ D ++ +LL + + + +IE + +++ + + NS
Sbjct: 182 T--EPNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSE 239
Query: 235 KLVQEIVLLIRQNCDEVSVSVSNAAIRAMSALCSMVSNRENLVKAGAIEAIIAYISEPRE 294
+ + ++ L+R S I+ + ALCS+ S R + AGA E +I ++ +
Sbjct: 240 SVFEGVLDLLRNPIS--SRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFD 297
Query: 295 KNLAPLAMVAMKKLVVLESGKEALVNHPRGIETLVKMVFRVCNQECSEIAVGVLLIVCCD 354
+ A+ ++ L G A H + LVK + RV ++ +E A G LL +C
Sbjct: 298 RCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDR-ATEYAAGALLALCTA 356
Query: 355 SGRAREEAIEGGVLTQLLFLLQSQC 379
R REEA GV+ QLL ++QS+C
Sbjct: 357 EERWREEAAGAGVVVQLLLMVQSEC 381
>AT1G49780.1 | Symbols: PUB26 | plant U-box 26 |
chr1:18429024-18430289 REVERSE LENGTH=421
Length = 421
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 179/384 (46%), Gaps = 18/384 (4%)
Query: 5 QVQITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIV 64
+ I IP+ FRCPISLDL DPVT+ TG TYDR+SI+ W++ GN TCPVT L D +++
Sbjct: 9 DLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLI 68
Query: 65 PNHTLRHLIDQWL---------QLGLQFDPGNSASIDYLASLKHNLESPEATLQSKLQAL 115
PNHTLR LI +W ++ P + S+ L S + +++S+ A+
Sbjct: 69 PNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAI 128
Query: 116 EKIRVLSDEYCSFKKTCFHQXXXXXXXXXXVFGKEDATSSPSKNHMEFAEVALSCIVKLL 175
++R L+ + + +F + TS ++ LL
Sbjct: 129 RRLRGLARD-SEKNRVLIAGHNAREILVRILFADIETTSL-----SSELVSESLALLVLL 182
Query: 176 PLVSLEPLNMIKDESKLATFLQLLEKGTSSIKTSLCQVIESTAAISQTDGVHHILGNSHK 235
+ E + D S++ +LL + I+ + +IE +++ + I+ S
Sbjct: 183 HMTETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDS 242
Query: 236 LVQEIVLLIRQNCDEVSVSVSNAAIRAMSALCSMVSNRENLVKAGAIEAIIAYISEPREK 295
+ + ++ L++ S I+A+ ALC + R + AGA +I ++ ++
Sbjct: 243 IFEGVLDLLKNPIS--SRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDR 300
Query: 296 NLAPLAMVAMKKLVVLESGKEALVNHPRGIETLVKMVFRVCNQECSEIAVGVLLIVCCDS 355
+ ++ L L G A H + +VK + RV ++ +E A G LL +C
Sbjct: 301 CDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDR-ATEYAAGALLALCTAE 359
Query: 356 GRAREEAIEGGVLTQLLFLLQSQC 379
R R+EA G++TQLL L+QS C
Sbjct: 360 ERCRDEAAAAGLVTQLLLLVQSDC 383
>AT3G49810.1 | Symbols: | ARM repeat superfamily protein |
chr3:18474936-18476282 REVERSE LENGTH=448
Length = 448
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 184/382 (48%), Gaps = 44/382 (11%)
Query: 10 IPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTL 69
IP +F CPISL+ +DPVTLCTG TY+R +I KW + G+LTCP TMQ+L D ++ PN TL
Sbjct: 64 IPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTL 123
Query: 70 RHLIDQWLQ-----LGLQFDPGNSASIDYLASLKHNLESPEATLQSKLQALEKIRVLSDE 124
HLI W + + + +I+ L +LK +A Q+++ AL +++ +
Sbjct: 124 HHLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLK------KAKGQARVHALSELKQIVIA 177
Query: 125 YCSFKKTCFHQXXXXXXXXXXVFGKEDATSS---PSKNHMEFAEVALSCIVKLLPLVSLE 181
+ +KT + G SS P +H +EV I+ L L S
Sbjct: 178 HLMARKTVVEE------------GGVSVISSLLGPFTSHAVGSEVV--AILVSLDLDSDS 223
Query: 182 PLNMIKDESKLATFLQLLEKGTSSIKTSLCQVIESTAAISQTDGVHHILGNSHKLVQEIV 241
+++ +K++ + +L G++ K + ++I + + G L +SH L+ ++
Sbjct: 224 KSGLMQ-PAKVSLIVDMLNDGSNETKINCARLIR---GLVEEKGFRAELVSSHSLLVGLM 279
Query: 242 LLIRQNCDEVSVSVSNAAIRAMSALCSMVSNRENLVKAGAIEAIIAYISEPREKNLAPLA 301
L++ VS A+R + + R +V GA+ ++ + + L LA
Sbjct: 280 RLVKDKRHRNGVS---PALRLLKPISVHKQVRSLMVSIGAVPQLVDILPSLDPECLE-LA 335
Query: 302 MVAMKKLVVLESGKEALVNHPRGIETLVKMVFRVCNQECSEIAVGVLLIVCCDSGRAREE 361
+ + L G+ A+ + I V+++ RV ++ C+ A+ +L VC A EE
Sbjct: 336 LFVLDALCTDVEGRVAVKDSANTIPYTVRVLMRV-SENCTNYALSILWSVC---KLAPEE 391
Query: 362 ----AIEGGVLTQLLFLLQSQC 379
A+E G+ +LL ++QS C
Sbjct: 392 CSPLAVEVGLAAKLLLVIQSGC 413
>AT3G52450.1 | Symbols: PUB22 | plant U-box 22 |
chr3:19440943-19442250 REVERSE LENGTH=435
Length = 435
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 182/408 (44%), Gaps = 46/408 (11%)
Query: 7 QITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNL-TCPVTMQKLHDPSIVP 65
+I IP F CPISLD+ +DPV + TG TYDR SIEKWL +G +CPVT Q + + + P
Sbjct: 4 EIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTP 63
Query: 66 NHTLRHLIDQWLQL----GLQFDPGNSASIDYLASLKHNLESPEATLQSKLQALEKIRVL 121
NHTLR LI W L G++ P I K ES + L ++++ L+++R +
Sbjct: 64 NHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHL-NQVKCLKRLRQI 122
Query: 122 SDEYCSFKKTCFHQXXXXXXXXXXVFGKEDA-----------------TSSPSKNHME-- 162
E + K+ C V D S+ +N +
Sbjct: 123 VSENTTNKR-CLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFDSS 181
Query: 163 --FAEVALSCIVKL----LPLVSLEPLNMIKDESKLATFLQLLEKGTSSIKTSLCQVIES 216
+ ALS + L L SL LN K + + T +++++G I S
Sbjct: 182 RSLMDEALSVLYHLDTSETALKSL--LNNKKGTNLVKTLTKIMQRG---IYESRAYAALL 236
Query: 217 TAAISQTDGVHHILGNSHKLVQEIVLLIRQNCDEVSVSVSNAAIRAMSALCSMVSNRENL 276
+ + I+ +L E++ ++ D++S + +A++ + C NR
Sbjct: 237 LKKLLEVADPMQIILLERELFGEVIQILH---DQISHKATRSAMQILVITCPWGRNRHKA 293
Query: 277 VKAGAIEAIIAYISE---PREKNLAPLAMVAMKKLVVLESGKEALVNHPRGIETLVKMVF 333
V+ G I II + + E+ + +AMV + L G+ +NH I + K +
Sbjct: 294 VEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKIL 353
Query: 334 RVCNQECSEIAVGVLLIV--CCDSGRAREEAIEGGVLTQLLFLLQSQC 379
RV +Q SE AV VLL V C + +E ++ GV+ +L +LQ C
Sbjct: 354 RV-SQITSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSC 400
>AT2G35930.1 | Symbols: PUB23 | plant U-box 23 |
chr2:15083101-15084336 REVERSE LENGTH=411
Length = 411
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 178/389 (45%), Gaps = 37/389 (9%)
Query: 7 QITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNL-TCPVTMQKLHDPSIVP 65
+I IP F CPISL++ +DPV + TG TYDR SIEKWL AG +CPVT Q + D + P
Sbjct: 9 EIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTP 68
Query: 66 NHTLRHLIDQWLQL----GLQFDPGNSASIDYLASLKHNLESPEATLQSKLQALEKIRVL 121
NHTLR LI W L G++ P I + ++ + ++ +++++ L+++R +
Sbjct: 69 NHTLRRLIQSWCTLNASYGVERIPTPRPPI-CKSEIEKLIRDSASSHENQVKCLKRLRQI 127
Query: 122 SDEYCSFKKTCFHQXXXXXXXXXXVFGKEDATSSPSK-----NHMEFAEVALSCIVKLLP 176
E + K+ C V + S + H+E +E
Sbjct: 128 VSENATNKR-CLEAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSET---------- 176
Query: 177 LVSLEPLNMIKDESKLATFLQLLEKGTSSIKTSLCQVIESTAAISQTDGVHHILGNSHKL 236
V LN KD + + + +++++G + ++++ ++ S L
Sbjct: 177 -VLKNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADP-------MQSMTL 228
Query: 237 VQEIVLLIRQNCDE-VSVSVSNAAIRAMSALCSMVSNRENLVKAGAIEAIIAYI---SEP 292
E+ + Q D+ +S + AA+ + +C NR V+AG I II + S
Sbjct: 229 KPEVFTEVVQILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFT 288
Query: 293 REKNLAPLAMVAMKKLVVLESGKEALVNHPRGIETLVKMVFRVCNQECSEIAVGVLLIV- 351
E+ +AMV + L G+ +NH I + K + RV +Q S+ AV VLL V
Sbjct: 289 SERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRV-SQTASDRAVRVLLSVG 347
Query: 352 -CCDSGRAREEAIEGGVLTQLLFLLQSQC 379
C + E ++ GV+ +L +LQ C
Sbjct: 348 RFCATPALLHEMLQLGVVAKLCLVLQVSC 376
>AT5G09800.1 | Symbols: | ARM repeat superfamily protein |
chr5:3043123-3044352 REVERSE LENGTH=409
Length = 409
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 180/394 (45%), Gaps = 49/394 (12%)
Query: 9 TIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHT 68
T+P F+CPISLD+ + PV+L TG TYDR SI++WL GN TCP TMQ L + VPN T
Sbjct: 10 TVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLT 69
Query: 69 LRHLIDQWLQLGLQFDPGNSASIDYLASLKHNLESPEATLQSKLQ---ALEKIRVLSDEY 125
L LID W S SI+ A + ESPE+ ++ + A+E+ R+ +D
Sbjct: 70 LHRLIDHW-----------SDSINRRA----DSESPESDTPTRDEINAAIERFRIENDA- 113
Query: 126 CSFKKTCFHQXXXXXXXXXXVFGKEDATS------SPSKNHMEFAEVALSCIVKLLPLV- 178
+ + GK+D + S S+N + + + VK+L ++
Sbjct: 114 ---RSKILRFARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIR 170
Query: 179 -------SLEPLNMIKDESKLATFLQLLEKGTSSIKTSLCQVIESTAAISQTDGVHHILG 231
L L + L +F L+++G +K V+E A +++ I+
Sbjct: 171 RKIFDRRRLSNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAES---KLIIA 227
Query: 232 NSHKLVQEIVLLIRQNCDEVSVSVSNAAIRAMSALCSMVSNRENLVKAGAIEAIIAYISE 291
LV EI I+ + S+ A + + A+ S + L++ + + + +++
Sbjct: 228 KGEGLVTEI---IKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTD 284
Query: 292 PREKNLAPLAMVAMKKLVVLESGKEALVNHPRG--IETLVKMVFRVCNQECSEIAVGVLL 349
P + +K L + S KE G +ET+V + +V + +E AV VL
Sbjct: 285 PTTS--VSVTEKCLKLLEAISSCKEGRSEICDGVCVETVVNKLMKV-STAATEHAVTVLW 341
Query: 350 IVCC--DSGRAREEAIEGGVLTQLLFLLQSQCCI 381
VC +A++ I +T++L LLQS C +
Sbjct: 342 SVCYLFKEKKAQDAVIRINGVTKILLLLQSNCSL 375
>AT5G65920.1 | Symbols: | ARM repeat superfamily protein |
chr5:26364323-26365657 REVERSE LENGTH=444
Length = 444
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 185/379 (48%), Gaps = 38/379 (10%)
Query: 10 IPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTL 69
IP +F CPISL+ +DPVTLCTG TY+RS+I KW + G+ TCP TMQ+L D + PN TL
Sbjct: 60 IPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTL 119
Query: 70 RHLIDQWLQ-----LGLQFDPGNSASIDYLASLKHNLESPEATLQSKLQALEKIRVLSDE 124
LI W + + + +I+ L +L+ +A ++K+ AL +++ +
Sbjct: 120 HQLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLR------KAKGKAKVHALSELKQVVMA 173
Query: 125 YCSFKKTCFHQXXXXXXXXXXVFGKEDATSSPSKNHMEFAEVALSCIVKLLPLVSLEPLN 184
+ KKT + SP +H +E A++ +V L L S
Sbjct: 174 HAIAKKTVVDEGGVFVISSLL---------SPFTSHAVGSE-AIAILVN-LELDSDSKAG 222
Query: 185 MIKDESKLATFLQLLEKGTSSIKTSLCQVIESTAAISQTDGVHHILGNSHKLVQEIVLLI 244
+++ ++++ + +L G+ K + ++I + + G L +SH L+ ++ L+
Sbjct: 223 LMQ-PARVSLMVDMLNDGSIETKINCARLI---GRLVEEKGFRAELVSSHSLLVGLMRLV 278
Query: 245 RQNCDEVSVSVSNAAIRAMSALCSMVSNRENLVKAGAIEAIIAYISEPREKNLAPLAMVA 304
+ VS + ++++S + R LV+ GA+ ++ + + L A+
Sbjct: 279 KDRRRRNGVSPALTLLKSVSVHKQV---RNLLVRIGAVPQLVDVLPCLDVECLES-ALFV 334
Query: 305 MKKLVVLESGKEALVNHPRGIETLVKMVFRVCNQECSEIAVGVLLIVCCDSGRAREE--- 361
+ L + G+ AL + I V+++ +V +++C+ A+ +L VC A EE
Sbjct: 335 LDSLCLESEGRIALKDSVNTIPHTVRLLMKV-SEKCTNYAISILWSVC---KLASEECSS 390
Query: 362 -AIEGGVLTQLLFLLQSQC 379
A+E G+ +LL ++QS C
Sbjct: 391 LAVEVGLAAKLLLVIQSGC 409
>AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY
protein 2 | chr5:25842119-25843381 REVERSE LENGTH=420
Length = 420
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%)
Query: 1 MNEAQVQITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHD 60
M + + IT+P FRCPISLD+ + PV+LCTG TYDR+SI++WL GN TCP TMQ L +
Sbjct: 1 MRKDDLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQN 60
Query: 61 PSIVPNHTLRHLIDQW 76
+PN TL+ LI+ W
Sbjct: 61 KDFIPNRTLQRLIEIW 76
>AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 |
chr3:6434234-6435481 REVERSE LENGTH=415
Length = 415
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 2 NEAQVQITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDP 61
+E + IT+P F+CPISLD+ PV+LCTG TYDR+SI++WL GN TCP TMQ L
Sbjct: 4 DETETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTK 63
Query: 62 SIVPNHTLRHLIDQW 76
VPN TL+ LI+ W
Sbjct: 64 DFVPNLTLQRLINIW 78
>AT1G23030.1 | Symbols: | ARM repeat superfamily protein |
chr1:8156745-8158842 FORWARD LENGTH=612
Length = 612
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 144/321 (44%), Gaps = 31/321 (9%)
Query: 7 QITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPN 66
++TIP F CP+SL+L +DPV + TG TY+R+ I++W+ GNLTCP T QKL + ++ PN
Sbjct: 238 KLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPN 297
Query: 67 HTLRHLIDQW-----LQLGLQFDPG---NSASIDYLASLKHNLESPEATLQSKLQALEKI 118
+ LR LI +W ++ + G NS + + +L L S + + + A+ +I
Sbjct: 298 YVLRSLISRWCAEHNIEQPAGYINGRTKNSGDMSVIRALVQRLSS--RSTEDRRNAVSEI 355
Query: 119 RVLSDEYCSFKKTCFHQXXXXXXXXXXVFGKEDATSSPSKNHMEFAEVALSCIVKLLPLV 178
R LS S + ED + E A++C++ L
Sbjct: 356 RSLSKR--STDNRILIAEAGAIPVLVNLLTSEDVATQ---------ENAITCVLNLSIYE 404
Query: 179 SLEPLNMIKDESKLATFLQLLEKGTSSIKTSLCQVIESTAAISQTDGVHHILGNSHKLVQ 238
+ + L M + + +Q+L GT + + + S +S D I+G S +
Sbjct: 405 NNKELIMFA--GAVTSIVQVLRAGTMEARENAAATLFS---LSLADENKIIIGGSGAIPA 459
Query: 239 EIVLLIRQNCDEVSVSVSNAAIRAMSALCSMVSNRENLVKAGAIEAIIAYISEPREKNLA 298
+ LL + + A A+ LC N+ V+AG + A++ +S+ +
Sbjct: 460 LVDLL-----ENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMV 514
Query: 299 PLAMVAMKKLVVLESGKEALV 319
A+ + L + K A+V
Sbjct: 515 DEALTILSVLANNQDAKSAIV 535
>AT1G71020.1 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26793105 REVERSE LENGTH=628
Length = 628
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 162/371 (43%), Gaps = 49/371 (13%)
Query: 7 QITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPN 66
+TIP F CPISL+L +DP + TG TY+RS I++W+ GNL+CP T QKL + ++ PN
Sbjct: 240 NLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPN 299
Query: 67 HTLRHLIDQWL------QLGLQFDPGNSASIDYLASLKHNLESPEA--------TLQSKL 112
+ LR LI QW Q G + S L ++ + A +++ +
Sbjct: 300 YVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDRR 359
Query: 113 QALEKIRVLSDEYCSFKKTCFHQXXXXXXXXXXVFGKEDATSSPSKNHMEFAEVALSCIV 172
A+ +IR LS K++ ++ V K S E E A++CI+
Sbjct: 360 TAVSEIRSLS------KRSTDNRILIAEAGAIPVLVK----LLTSDGDTETQENAVTCIL 409
Query: 173 KLLPLVSLEPLNMIKDESKLATFLQLLEKGTSSIKTSLCQVIESTAAISQTDGVHHILGN 232
L + L M+ + + + +L G+ + + + S +S D I+G
Sbjct: 410 NLSIYEHNKELIMLA--GAVTSIVLVLRAGSMEARENAAATLFS---LSLADENKIIIGA 464
Query: 233 SHKLVQEIVLLIRQNCDEVSVSVSNAAIRAMSALCSMVSNRENLVKAGAIEAIIAYISEP 292
S ++ + LL SV A A+ LC N+ V+AG ++ ++ +++
Sbjct: 465 SGAIMALVDLL-----QYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDS 519
Query: 293 REKNLAPLAMVAMKKLVVLESGKEALV--------------NHPRGIETLVKMVFRVCNQ 338
+ +A A+ + L + K A++ + PR E ++ +C +
Sbjct: 520 SSERMADEALTILSVLASNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLCKR 579
Query: 339 ECSE-IAVGVL 348
+ + I++G L
Sbjct: 580 DTEKLISIGRL 590
>AT1G71020.2 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26792357 REVERSE LENGTH=480
Length = 480
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 162/371 (43%), Gaps = 49/371 (13%)
Query: 7 QITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPN 66
+TIP F CPISL+L +DP + TG TY+RS I++W+ GNL+CP T QKL + ++ PN
Sbjct: 92 NLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPN 151
Query: 67 HTLRHLIDQWL------QLGLQFDPGNSASIDYLASLKHNLESPEA--------TLQSKL 112
+ LR LI QW Q G + S L ++ + A +++ +
Sbjct: 152 YVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDRR 211
Query: 113 QALEKIRVLSDEYCSFKKTCFHQXXXXXXXXXXVFGKEDATSSPSKNHMEFAEVALSCIV 172
A+ +IR LS K++ ++ V K S E E A++CI+
Sbjct: 212 TAVSEIRSLS------KRSTDNRILIAEAGAIPVLVK----LLTSDGDTETQENAVTCIL 261
Query: 173 KLLPLVSLEPLNMIKDESKLATFLQLLEKGTSSIKTSLCQVIESTAAISQTDGVHHILGN 232
L + L M+ + + + +L G+ + + + S +S D I+G
Sbjct: 262 NLSIYEHNKELIMLA--GAVTSIVLVLRAGSMEARENAAATLFS---LSLADENKIIIGA 316
Query: 233 SHKLVQEIVLLIRQNCDEVSVSVSNAAIRAMSALCSMVSNRENLVKAGAIEAIIAYISEP 292
S ++ + LL SV A A+ LC N+ V+AG ++ ++ +++
Sbjct: 317 SGAIMALVDLL-----QYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDS 371
Query: 293 REKNLAPLAMVAMKKLVVLESGKEALV--------------NHPRGIETLVKMVFRVCNQ 338
+ +A A+ + L + K A++ + PR E ++ +C +
Sbjct: 372 SSERMADEALTILSVLASNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLCKR 431
Query: 339 ECSE-IAVGVL 348
+ + I++G L
Sbjct: 432 DTEKLISIGRL 442
>AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 |
chr1:10264412-10266601 FORWARD LENGTH=729
Length = 729
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 48/69 (69%)
Query: 8 ITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNH 67
IT+P F CPISLDL DPV + TG TYDR+SI +W+ G+ TCP T Q L D IVPN
Sbjct: 303 ITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNR 362
Query: 68 TLRHLIDQW 76
L++LI QW
Sbjct: 363 ALKNLIVQW 371
>AT5G37490.1 | Symbols: | ARM repeat superfamily protein |
chr5:14887744-14889051 FORWARD LENGTH=435
Length = 435
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 53/75 (70%)
Query: 2 NEAQVQITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDP 61
+E + +ITIP F+CPIS+DL +DPV + TG TYDR SIE W+++GN TCPVT L
Sbjct: 23 SEPESEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTF 82
Query: 62 SIVPNHTLRHLIDQW 76
+PNHT+R +I W
Sbjct: 83 DQIPNHTIRKMIQGW 97
>AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 |
chr4:11356143-11357267 REVERSE LENGTH=374
Length = 374
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 164/377 (43%), Gaps = 57/377 (15%)
Query: 10 IPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHD-PSIVPNHT 68
+P+ FRCPISL++ DPV L +GHT+DR SI++W+ +GN TCP+T L + P ++PNH
Sbjct: 5 LPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHA 64
Query: 69 LRHLIDQWLQLGLQFDPGNSASIDYLAS----LKHNLESPEATLQSKLQALEKIRVLSDE 124
LR LI + + L+ ++ S L L S ++ SKL++L ++ L+
Sbjct: 65 LRSLILNFAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVRLTKR 124
Query: 125 YCSFKKTCFHQXXXXXXXXXXVFGKEDATSSPSKNHMEFAEVALSCI-----VKLLPLVS 179
S ++ T S + AL C+ V +S
Sbjct: 125 DSSIRRK--------------------VTESGA------VRAALDCVDSCNQVLQEKSLS 158
Query: 180 LEPLNMIKDESKLA--------TFLQLLEKGTSSIKTSLCQVIESTAAISQTDGVHHILG 231
L ++D++K+ + +L G+ K ++ S A + +G
Sbjct: 159 LLLNLSLEDDNKVGLVADGVIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKAT---IG 215
Query: 232 NSHKLVQEIVLLIRQNCDEVSVSVSNAAIRAMSALCSMVSNRENLVKAGAIEAIIAYISE 291
+ + +V L+R D + A + ALCS NR+ +V G++ ++
Sbjct: 216 SYPDAISALVSLLRVGNDRERKESATA----LYALCSFPDNRKRVVDCGSVPILVEAADS 271
Query: 292 PREKNLAPLAMVAMKKLVVLESGKEALVNHPRGIETLVKMVFRVCNQECSEIAVGVLLIV 351
E+ + L + LV G+E + +E LV V R N + + ++ +L +
Sbjct: 272 GLERAVEVLGL-----LVKCRGGREEMSKVSGFVEVLVN-VLRNGNLKGIQYSLFILNCL 325
Query: 352 CCDSGRAREEAIEGGVL 368
CC SG +E GV+
Sbjct: 326 CCCSGEIVDEVKREGVV 342
>AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=431
Length = 431
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%)
Query: 5 QVQITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIV 64
+V+ITIP F+CPIS +L +DPV + +G TYDR +IEKW +G TCPVT L +
Sbjct: 28 EVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQI 87
Query: 65 PNHTLRHLIDQW 76
PNHT+R +I W
Sbjct: 88 PNHTIRRMIQGW 99
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 10 IPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTL 69
IP FRCPISL++ DPV + +G TY+R+ IEKW+ G+ TCP T Q L ++ PN+ L
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVL 315
Query: 70 RHLIDQW 76
R LI QW
Sbjct: 316 RSLIAQW 322
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
chr3:20321524-20323848 FORWARD LENGTH=632
Length = 632
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 47/67 (70%)
Query: 10 IPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTL 69
IP FRCPISL+L +DPV + TG TY+RSSI+KWL AG+ TCP + + L + PN+ L
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVL 307
Query: 70 RHLIDQW 76
+ LI W
Sbjct: 308 KSLIALW 314
>AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 |
chr5:16928086-16930367 REVERSE LENGTH=660
Length = 660
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 48/69 (69%)
Query: 8 ITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNH 67
+ +PH F CPI+L++ DPV + TG TY++ SI+KW AG+ TCP T Q+L S+ PN
Sbjct: 288 LILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNF 347
Query: 68 TLRHLIDQW 76
L++LI QW
Sbjct: 348 ALKNLIMQW 356
>AT3G54790.2 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284255 REVERSE LENGTH=724
Length = 724
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 9/93 (9%)
Query: 8 ITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNH 67
I+IP FRCP+S +L DPV + +G T+DR+SI+KWL G CP T Q L ++PN+
Sbjct: 200 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNY 259
Query: 68 TLRHLIDQWLQLGL---------QFDPGNSASI 91
T++ +I WL+ Q+D G+++S+
Sbjct: 260 TVKAMIASWLEANRINLATNSCHQYDGGDASSM 292
>AT3G54790.1 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284363 REVERSE LENGTH=760
Length = 760
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 9/93 (9%)
Query: 8 ITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNH 67
I+IP FRCP+S +L DPV + +G T+DR+SI+KWL G CP T Q L ++PN+
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNY 295
Query: 68 TLRHLIDQWLQLGL---------QFDPGNSASI 91
T++ +I WL+ Q+D G+++S+
Sbjct: 296 TVKAMIASWLEANRINLATNSCHQYDGGDASSM 328
>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
chr2:12367001-12370608 REVERSE LENGTH=962
Length = 962
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 44/66 (66%)
Query: 11 PHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLR 70
P FRCPISL+L DPV + +G TY+R I+KWL G+LTCP T + L + PN+ LR
Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLR 316
Query: 71 HLIDQW 76
LI QW
Sbjct: 317 SLIAQW 322
>AT5G01830.1 | Symbols: | ARM repeat superfamily protein |
chr5:320983-323007 FORWARD LENGTH=674
Length = 674
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 46/67 (68%)
Query: 10 IPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTL 69
IP FRCPI+L+L DPV + TG TYDR SI+ W+ +G+ TCP T Q L S+VPN L
Sbjct: 274 IPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRAL 333
Query: 70 RHLIDQW 76
++LI W
Sbjct: 334 KNLIVLW 340
>AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2354884-2356613 FORWARD LENGTH=460
Length = 460
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 8 ITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNH 67
++ P FRCP+S +L DPV L +G TYD+ I+KWLS+GN TCP T Q L ++ PN
Sbjct: 72 VSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLPHTALTPNL 131
Query: 68 TLRHLIDQW-----LQLGLQFDPG 86
+R +I +W L+ Q+ P
Sbjct: 132 LIREMISKWCKKNGLETKSQYHPN 155
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
chr1:9720962-9723975 REVERSE LENGTH=768
Length = 768
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 2 NEAQVQITIP-HLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHD 60
N Q+++P RCPISL L DPV + +G TY+R IEKW S G+ TCP T Q+L
Sbjct: 270 NRRSSQMSVPPEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSH 329
Query: 61 PSIVPNHTLRHLIDQWL-QLGLQFDPGNSASID 92
+ PN+ ++ LI W Q G+Q G S+D
Sbjct: 330 LCLTPNYCVKALISSWCEQNGVQVPDGPPESLD 362
>AT3G11840.1 | Symbols: PUB24 | plant U-box 24 |
chr3:3736578-3738250 REVERSE LENGTH=470
Length = 470
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 1 MNEAQVQITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLH- 59
M++ + +I IP+ F CPISL++ +DPVT +G TYDR +I KWL +CPVT Q L
Sbjct: 15 MDQEEEEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKVP-SCPVTKQPLPL 73
Query: 60 DPSIVPNHTLRHLIDQW 76
D + PNH LR LI W
Sbjct: 74 DSDLTPNHMLRRLIQHW 90
>AT1G67530.2 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 1 MNEAQVQITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHD 60
+N Q+ + P RCPISL L DPV + +G TY+R IEKW S G+ TCP T Q+L
Sbjct: 264 INSGQMPVP-PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPH 322
Query: 61 PSIVPNHTLRHLIDQWL-QLGLQF--DPGNSASIDY 93
S+ PN+ ++ LI W Q G Q P S +DY
Sbjct: 323 ISLTPNNCVKGLIASWCEQNGTQIPSGPPESQDLDY 358
>AT1G67530.1 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 1 MNEAQVQITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHD 60
+N Q+ + P RCPISL L DPV + +G TY+R IEKW S G+ TCP T Q+L
Sbjct: 264 INSGQMPVP-PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPH 322
Query: 61 PSIVPNHTLRHLIDQWL-QLGLQF--DPGNSASIDY 93
S+ PN+ ++ LI W Q G Q P S +DY
Sbjct: 323 ISLTPNNCVKGLIASWCEQNGTQIPSGPPESQDLDY 358
>AT1G60190.1 | Symbols: | ARM repeat superfamily protein |
chr1:22198403-22200463 FORWARD LENGTH=686
Length = 686
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 156/367 (42%), Gaps = 49/367 (13%)
Query: 14 FRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLRHLI 73
RCPISL++ DPV L +GHTYDRSSI KW ++GN+TCP T + L +V N +++ +I
Sbjct: 282 LRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVI 341
Query: 74 DQW-LQLGLQFDPGNSASIDYLASL------KHNLESPEATL-----QSKLQALEKIRVL 121
+ Q G+ +D SL K E L + ++AL +IR+L
Sbjct: 342 QSYSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEEMVKALVEIRIL 401
Query: 122 SDEYCSFKKTCFHQXXXXXXXXXXVFGKEDATSSPSKNHMEFAEVALSCIVKLLPLVSLE 181
+ + +F ++C + E + E A++ I+ L ++ +
Sbjct: 402 T-KTSTFYRSCLVEAGVV----------ESLMKILRSDDPRIQENAMAGIMNLSKDIAGK 450
Query: 182 PLNMIKDESKLATFLQLLEKGTSSIKTSLCQVIESTAAISQTDGVHHILGNSHKLVQEI- 240
+ +D L +++L G ES + LG+ +L+ EI
Sbjct: 451 TRIVGEDGGGLRLIVEVLNDGARR---------ESRQYAAAALFYLSSLGDYSRLIGEIS 501
Query: 241 -----VLLIRQNCDEVSVSVSNAAIRAMSALCSMVSNRENLVKAGAIEAIIAYI-SEPRE 294
++ I ++CD + NA I S L + N ++ AG + ++ + SE
Sbjct: 502 DAIPGLVRIVKSCDYGDSAKRNALIAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEEIS 561
Query: 295 KNLAPLAMVAMKKLVVLESGKEALVNHPRGIETLVKM-----VFRVCNQECSEIAVGVLL 349
+ +M + K+ G +++ G++ VK+ V Q C V +LL
Sbjct: 562 DGVTADSMAILAKMAEYPDGMISVLRRG-GLKLAVKILGSSEVSPATKQHC----VALLL 616
Query: 350 IVCCDSG 356
+C + G
Sbjct: 617 NLCHNGG 623
>AT1G24330.1 | Symbols: | ARM repeat superfamily protein |
chr1:8631779-8634835 FORWARD LENGTH=771
Length = 771
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 11 PHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLR 70
P RCPISL L DPV + +G TY+R IEKW S G+ +CP T Q+L S+ PN+ ++
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 71 HLIDQWL-QLGLQFDPGNSASID--YLASLKHNLESPEA 106
LI W Q G+ G S+D Y + ESP +
Sbjct: 336 GLIASWCEQNGITVPTGPPESLDLNYWRLAMSDSESPNS 374
>AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 |
chr1:3484613-3486706 FORWARD LENGTH=697
Length = 697
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 42/58 (72%)
Query: 16 CPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLRHLI 73
CPISL++ DPV + TGHTYDRSSI KW +GN+TCP+T + L +V N ++R +I
Sbjct: 294 CPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVI 351
>AT2G45920.1 | Symbols: | U-box domain-containing protein |
chr2:18899363-18901097 FORWARD LENGTH=400
Length = 400
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 40/73 (54%)
Query: 11 PHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLR 70
P F CPISL++ +DP G TY+ +I WL G+ T P+T KLH +VPN LR
Sbjct: 326 PQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVPNLALR 385
Query: 71 HLIDQWLQLGLQF 83
I +WL F
Sbjct: 386 SAIQEWLHASSSF 398
>AT4G36550.1 | Symbols: | ARM repeat superfamily protein |
chr4:17245400-17247926 REVERSE LENGTH=718
Length = 718
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 9 TIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHT 68
T+P F+C +S + DPV + +G+T++R I+KW GN +CP++ +KL D ++ PN
Sbjct: 218 TLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVE 277
Query: 69 LRHLIDQW-LQLGLQF-DPGN-----SASIDYLASL 97
L+ I +W + GL DP S SID+ S+
Sbjct: 278 LKSQISEWCAKNGLDVQDPARKHVKASNSIDFSVSI 313
>AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 |
chr1:246411-248329 REVERSE LENGTH=308
Length = 308
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 14 FRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLRHLI 73
F+CPIS+++ DP G TY+ KWL +G T P T + L + ++VPNHTLR +I
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRIII 296
Query: 74 DQWLQLGLQF 83
WL+ +
Sbjct: 297 KDWLEKNPNY 306
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 1 MNEAQVQ--ITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKL 58
+ +AQ++ + +P FRC +SL+L DPV + +G T++R I+KW+ G + CP T Q L
Sbjct: 229 IKQAQLRCPVRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQAL 288
Query: 59 HDPSIVPNHTLRHLIDQWLQLGLQFDP 85
++ PN +R + W + + P
Sbjct: 289 SHTTLTPNFIVRAFLASWCETNNVYPP 315
>AT1G01660.1 | Symbols: | RING/U-box superfamily protein |
chr1:240057-242608 REVERSE LENGTH=568
Length = 568
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 43/77 (55%)
Query: 2 NEAQVQITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDP 61
+E V P F CPIS ++ +P G TY+ S+ +WL G+ T P+T KL
Sbjct: 489 DEDSVTRQPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHN 548
Query: 62 SIVPNHTLRHLIDQWLQ 78
++VPNH LR I +WLQ
Sbjct: 549 NLVPNHALRSAIQEWLQ 565
>AT3G61390.2 | Symbols: | RING/U-box superfamily protein |
chr3:22716418-22718270 FORWARD LENGTH=435
Length = 435
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%)
Query: 11 PHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLR 70
P F CPI+ D+ EDP G TY+ +I +W G+ T P+ ++L S+VPN LR
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLALR 413
Query: 71 HLIDQWLQL 79
I +WLQL
Sbjct: 414 SAIQEWLQL 422
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 14 FRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLRHLI 73
F CP+SL++ DPV + +G TY+++ I++W+ G CP T Q L +++PN+T++ LI
Sbjct: 237 FFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALI 296
Query: 74 DQWLQLG-LQF-DPGNSASIDYLASL 97
W + ++ DP S S++ L+ L
Sbjct: 297 ANWCETNDVKLPDPNKSTSLNELSPL 322
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
Query: 14 FRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLRHLI 73
F CP+SL++ DPV + +G TY+++ I++W+ G CP T Q L +++PN+T++ LI
Sbjct: 234 FFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKALI 293
Query: 74 DQWLQLG-LQF-DPGNSASIDYLASL 97
W + ++ DP S S++ L+ L
Sbjct: 294 ANWCETNDVKLPDPNKSTSLNELSPL 319
>AT5G18340.1 | Symbols: | ARM repeat superfamily protein |
chr5:6070640-6072198 REVERSE LENGTH=456
Length = 456
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 154/327 (47%), Gaps = 44/327 (13%)
Query: 8 ITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNH 67
+ +P F+C +S + DPV + +G TY++ I +WL+ +LTCP Q L+ + PNH
Sbjct: 72 VEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLN-HDLTCPTAKQVLYRVCLTPNH 130
Query: 68 TLRHLIDQWLQLGLQFD-PGNSAS-IDYLA--------SLKHNLESPEATLQSKLQALEK 117
+ LI +W L ++D P S IDY+ SL + SP +++ + +A ++
Sbjct: 131 LINELITRWC-LANKYDRPAPKPSDIDYVTELFTDGIESLLQRISSPSSSVADQTEAAKE 189
Query: 118 IRVLSDEYCSFKKTCFHQ---XXXXXXXXXXVFGKEDATSSPSKNHMEFAEVALSCIVKL 174
+ + ++++ + + + V G E S+P E+ + + L
Sbjct: 190 LALQTEKFVNVRDFFIKELPDSITRLLTPLSVLGDE-VDSNP--------ELQENIVTAL 240
Query: 175 LPLVSLEPLNMIKDESKLATFLQLLEKGTSSIKT-SLCQVIEST---AAISQTDGVHHIL 230
+ + E K+++ LA Q++ S+K S+ +T A++S D I+
Sbjct: 241 FNMSTFE-----KNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNKIII 295
Query: 231 GNSHKLVQEIVLLIRQNCDEVSVSVSNAAIRAMSALCSMVSNRENLVKA---GAIEAIIA 287
GNS L + ++ LI + D +S ++ A+ A+ LC REN KA G A I
Sbjct: 296 GNSVAL-KALIDLIGELDD---LSATHDALCAVIDLC--CDERENWKKAISLGLAPAAIK 349
Query: 288 YISEPRE--KNLAPLAMVAMKKLVVLE 312
I R ++LA LA+++ + V+ E
Sbjct: 350 NIKARRNLFESLAALALISPHERVIQE 376
>AT1G01670.1 | Symbols: | RING/U-box superfamily protein |
chr1:242943-245163 REVERSE LENGTH=365
Length = 365
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 6 VQITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVP 65
V I P F CPIS D+ ++P G+TY+ +WL+ G P+T +L + +++P
Sbjct: 290 VSIEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLIP 349
Query: 66 NHTLRHLIDQWLQ 78
N LR I WLQ
Sbjct: 350 NLVLRSAIKDWLQ 362
>AT5G65500.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:26181093-26183997 REVERSE
LENGTH=791
Length = 791
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 10 IPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTL 69
IP +F CPI ++ ++P G +Y+ +I++WLS G+ T P+T +L + PNHTL
Sbjct: 715 IPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTSPMTNLRLDYQMLTPNHTL 774
Query: 70 RHLIDQW 76
R LI W
Sbjct: 775 RSLIQDW 781
>AT5G57035.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:23080743-23083819 FORWARD
LENGTH=789
Length = 789
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 5 QVQITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIV 64
Q P + CPI ++ EDP G TY+R +I++W+ PVT +L +
Sbjct: 703 QANARAPTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLT 762
Query: 65 PNHTLRHLIDQW 76
PNHTLR I +W
Sbjct: 763 PNHTLRSAIREW 774
>AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |
chr1:20960356-20962334 REVERSE LENGTH=485
Length = 485
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 11 PHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLR 70
P F CPI+ ++ +DP G TY+ SI KWLS G+ T P+T +L ++VPN LR
Sbjct: 419 PSSFFCPITQEVMKDPHFAADGFTYEAESIRKWLSTGHQTSPMTNLRLSHLTLVPNRALR 478
Query: 71 HLIDQ 75
I++
Sbjct: 479 SAIEE 483
>AT2G45910.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:18894520-18898212 FORWARD
LENGTH=834
Length = 834
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 11 PHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLR 70
P F CPI ++ +DP G TY+ +I WL + + T P+T KL S++ NH LR
Sbjct: 764 PPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHALR 823
Query: 71 HLIDQWLQ 78
I +WLQ
Sbjct: 824 SAIQEWLQ 831
>AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=415
Length = 415
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 16/72 (22%)
Query: 5 QVQITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIV 64
+V+ITIP F+CPIS +L +DP W +G TCPVT L +
Sbjct: 28 EVEITIPSQFQCPISYELMKDP----------------WFESGYQTCPVTNTVLTSLEQI 71
Query: 65 PNHTLRHLIDQW 76
PNHT+R +I W
Sbjct: 72 PNHTIRRMIQGW 83
>AT4G25160.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr4:12903360-12906669 REVERSE
LENGTH=835
Length = 835
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 11 PHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLR 70
P F CP+ D+ +P G+TYDR +IE+WL N T P+T LH +++PN+TL
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKEHN-TSPMTDSPLHSKNLLPNYTLY 825
Query: 71 HLIDQW 76
I +W
Sbjct: 826 TAIMEW 831
>AT5G51270.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:20835137-20838262 REVERSE
LENGTH=819
Length = 819
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 11 PHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLR 70
P F CP+ D+ ++P G+TYDR +IE+W+ + T PVT L + +++PNHTL
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWME-NHRTSPVTNSPLQNVNLLPNHTLY 808
Query: 71 HLIDQW 76
I +W
Sbjct: 809 AAIVEW 814
>AT2G19410.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:8404901-8409012 REVERSE LENGTH=801
Length = 801
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 11 PHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLR 70
P + CPI ++ E+P G TY+R +I WL N++ PVT QKL + PNHTLR
Sbjct: 726 PSHYFCPILREIMEEPEIAADGFTYERKAILAWLEKHNIS-PVTRQKLDHFKLTPNHTLR 784
Query: 71 HLIDQW 76
I W
Sbjct: 785 SAIRDW 790
>AT3G49060.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187054-18191878 REVERSE
LENGTH=795
Length = 795
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 11 PHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLR 70
P + CPI ++ +DP+ G TY+ +I +WL+ G+ T P+T K+ D +++PNH L
Sbjct: 726 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 785
Query: 71 HLIDQW 76
I W
Sbjct: 786 LAIQDW 791
>AT3G49060.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187386-18191878 REVERSE
LENGTH=805
Length = 805
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 11 PHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLR 70
P + CPI ++ +DP+ G TY+ +I +WL+ G+ T P+T K+ D +++PNH L
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 71 HLIDQW 76
I W
Sbjct: 796 LAIQDW 801
>AT1G76390.2 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 2 NEAQVQITIPHL---FRCPISLDLFEDPVTLCTGHTYDRSSIEKWL-----SAGNLTCPV 53
N +Q + I ++ F CP++ + +PVTL G T++R +IEKW + L+CP+
Sbjct: 14 NSSQFEPGIDNIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPI 73
Query: 54 TMQKLHDPSIVPNHTLRHLIDQW 76
T ++L + P+ LR+ I++W
Sbjct: 74 TSKELSITDLSPSIALRNTIEEW 96
>AT1G76390.1 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 2 NEAQVQITIPHL---FRCPISLDLFEDPVTLCTGHTYDRSSIEKWL-----SAGNLTCPV 53
N +Q + I ++ F CP++ + +PVTL G T++R +IEKW + L+CP+
Sbjct: 14 NSSQFEPGIDNIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPI 73
Query: 54 TMQKLHDPSIVPNHTLRHLIDQW 76
T ++L + P+ LR+ I++W
Sbjct: 74 TSKELSITDLSPSIALRNTIEEW 96
>AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 |
senescence-associated E3 ubiquitin ligase 1 |
chr1:7217812-7220609 FORWARD LENGTH=801
Length = 801
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 14 FRCPISLDLFEDPVTLCTGHTYDRSSIEKWL-----SAGNLTCPVTMQKLHDPSIVPNHT 68
F CP++ ++ DPVTL G T++R +IEKW S +CP+T Q+L + +
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASIA 86
Query: 69 LRHLIDQW 76
LR+ I++W
Sbjct: 87 LRNTIEEW 94
>AT5G61560.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=794
Length = 794
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 11 PHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLR 70
P F CPI+ D+ E+P G+TY++ +I++WL N P+T S++PNH+L
Sbjct: 724 PTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQK-NHKSPMTDLPFPSDSLLPNHSLL 782
Query: 71 HLIDQW 76
I +W
Sbjct: 783 SAIKEW 788
>AT5G61560.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=796
Length = 796
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 11 PHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLR 70
P F CPI+ D+ E+P G+TY++ +I++WL N P+T S++PNH+L
Sbjct: 726 PTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQK-NHKSPMTDLPFPSDSLLPNHSLL 784
Query: 71 HLIDQW 76
I +W
Sbjct: 785 SAIKEW 790
>AT5G18320.1 | Symbols: | ARM repeat superfamily protein |
chr5:6064431-6066186 REVERSE LENGTH=458
Length = 458
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 140/340 (41%), Gaps = 49/340 (14%)
Query: 8 ITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNH 67
+ +P F C +S + +PV + +G TY++ I +WL TCP T Q L +PNH
Sbjct: 70 VEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKHER-TCPKTKQVLSHRLWIPNH 128
Query: 68 TLRHLIDQWLQLGLQFD---PGNSASIDYLASLKHNLESPEATLQSKLQALEKIRVLSDE 124
+ LI QW + ++D P + + S +++ LQ + ++D+
Sbjct: 129 LISDLITQWCLVN-KYDHQKPSDELVAELFTS----------DIEALLQRVSSSSSVADQ 177
Query: 125 YCSFKKTCFHQXXXXXXXXXXVFGKEDATS---SPSKNHMEFAEVAL----SCIVKLLPL 177
+ K+ V G D+ + SP E + +L + + L L
Sbjct: 178 IEAAKELRHQTKKFPNVRVFFVAGIHDSITRLLSPLSTLDEAVDSSLELQENIVTALFNL 237
Query: 178 VSLEPLNMIKDESKLATFL--QLLEKGTSSIKTSLCQVIESTAAISQTDGVHHILGNSHK 235
LE + E+ L L + L++GT + + + S +AI D I+GNS
Sbjct: 238 SILESNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAI---DSNKIIIGNSEA 294
Query: 236 LVQEIVLLIRQNCDEVSVSVSNAAIRAMSALCSMVSNRENLVKAGAIEAIIAYISEPREK 295
V+ ++ LI +E + + A + LC ++ N+ +V AG I A I
Sbjct: 295 -VKALIDLI----EEGDLLATKEATSTVFNLCIVLENKGKVVSAGLIHAATKKIKAGSNV 349
Query: 296 N--LAPLAMVAMKKLVVLESGKEALVNHPRGIETLVKMVF 333
+ L+ LA+++ H R +E + K+ F
Sbjct: 350 DELLSLLALIS---------------THNRAVEEMDKLGF 374
>AT5G18330.1 | Symbols: | ARM repeat superfamily protein |
chr5:6068474-6070042 REVERSE LENGTH=445
Length = 445
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 126/291 (43%), Gaps = 30/291 (10%)
Query: 8 ITIPHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNH 67
+ +P F C +S + +P+ + +G T+++S I +WL TCP T Q L+ ++PNH
Sbjct: 63 VEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKHER-TCPRTKQVLYHRFMIPNH 121
Query: 68 TLRHLIDQWLQLGLQFDPGNSAS--IDY----LASLKHNLESPEATLQSKLQALEKIRVL 121
+ +I +W + FD ++ ID L SL + SP ++++ + +A +++ +
Sbjct: 122 LINEVIKEWCLIH-NFDRPKTSDEVIDLFTGDLESLLQRISSP-SSVEDQTEAAKELALK 179
Query: 122 SDEYCSFKKTCFHQXXXXXXXXXXVFGKEDATSSPSKNHMEFAEVAL---SCIVKLLPLV 178
+ + S C + + + + +E AL S K LV
Sbjct: 180 AKRFSS---VCVYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHIFSTSEKNKTLV 236
Query: 179 SLEPLNMIKDESKLATFLQLLEKGTSSIKTSLCQVIESTAAISQTDGVHHILGNSHKLVQ 238
+ PL L + +++GT + + S +S TD I+GNS V
Sbjct: 237 AENPL-------VLPLLAKYMKQGTVLTRIHSAATVNS---LSYTDSNKIIIGNSE--VL 284
Query: 239 EIVLLIRQNCDEVSVSVSNAAIRAMSALCSMVSNRENLVKAGAIEAIIAYI 289
+ ++ + + D ++ S A A+S LC + E V G I A I I
Sbjct: 285 KALIHVIEEGDSLATS---EAFSALSNLCPVKEISEKAVSEGLIRAAIKKI 332
>AT4G16490.1 | Symbols: | ARM repeat superfamily protein |
chr4:9293891-9295530 REVERSE LENGTH=472
Length = 472
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 7/148 (4%)
Query: 259 AIRAMSALCSMVSNRENLVKAGAIEAIIAYISEPREKNLAPLAMVAMKKLVVLESGKEAL 318
A+ + LC++ N+E V AGA++ ++ ++E +A AMV + L ++ GKEA+
Sbjct: 327 ALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAE-EGTGMAEKAMVVLSSLAAIDDGKEAI 385
Query: 319 VNHPRGIETLVKMVFRVCNQECSEIAVGVLLIVCCDSGRAREEAIEGGVLTQLLFLLQSQ 378
V GI LV+ + + + E A+ LL +C DS R R + G + L+ L QS
Sbjct: 386 VEEG-GIAALVEAI-EDGSVKGKEFAILTLLQLCSDSVRNRGLLVREGAIPPLVGLSQSG 443
Query: 379 CCIXXXXXXXXXXXXXXSKWIEEPRKQV 406
++ EPRK+
Sbjct: 444 SVSVRAKRKAERLL----GYLREPRKEA 467
>AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1061
Length = 1061
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 14 FRCPISLDLFEDPVTLCTGHTYDRSSIEKWL-SAGN---LTCPVTMQKLHDPSIVPNHTL 69
F CP++ ++ EDPVT TG T +R ++ +W S GN + CPVT QKL + N L
Sbjct: 250 FICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKL-TTELSANVVL 308
Query: 70 RHLIDQW-----------LQLGLQFDPGNSASIDYLASLKHNLESPEATLQSKLQALEK- 117
+ +I +W L S ID L L+ E E +K+Q E
Sbjct: 309 KTIIQEWKVRNEAARIKVAHAALSLGGSESMVIDALRDLQMTCEGKE---YNKVQVREAG 365
Query: 118 IRVLSDEYCSFK 129
I L D Y +++
Sbjct: 366 IIQLLDRYLTYR 377
>AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1035
Length = 1035
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 14 FRCPISLDLFEDPVTLCTGHTYDRSSIEKWL-SAGN---LTCPVTMQKLHDPSIVPNHTL 69
F CP++ ++ EDPVT TG T +R ++ +W S GN + CPVT QKL + N L
Sbjct: 250 FICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKL-TTELSANVVL 308
Query: 70 RHLIDQW-----------LQLGLQFDPGNSASIDYLASLKHNLESPEATLQSKLQALEK- 117
+ +I +W L S ID L L+ E E +K+Q E
Sbjct: 309 KTIIQEWKVRNEAARIKVAHAALSLGGSESMVIDALRDLQMTCEGKE---YNKVQVREAG 365
Query: 118 IRVLSDEYCSFK 129
I L D Y +++
Sbjct: 366 IIQLLDRYLTYR 377
>AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25922001-25925374 REVERSE LENGTH=1033
Length = 1033
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 14 FRCPISLDLFEDPVTLCTGHTYDRSSIEKWL-SAGN---LTCPVTMQKLHDPSIVPNHTL 69
F CP++ ++ EDPVT TG T +R ++ +W S GN + CPVT QKL + N L
Sbjct: 250 FICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKL-TTELSANVVL 308
Query: 70 RHLIDQW-----------LQLGLQFDPGNSASIDYLASLKHNLESPEATLQSKLQALEK- 117
+ +I +W L S ID L L+ E E +K+Q E
Sbjct: 309 KTIIQEWKVRNEAARIKVAHAALSLGGSESMVIDALRDLQMTCEGKE---YNKVQVREAG 365
Query: 118 IRVLSDEYCSFK 129
I L D Y +++
Sbjct: 366 IIQLLDRYLTYR 377
>AT5G61550.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751558 FORWARD
LENGTH=845
Length = 845
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 11 PHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLR 70
P F CP+ + +P G+TYDR +IE+WL + T PVT L + +++ N+TL
Sbjct: 776 PSHFICPLLKGVMNEPCVAADGYTYDREAIEEWLRQKD-TSPVTNLPLPNKNLIANYTLY 834
Query: 71 HLIDQW 76
I +W
Sbjct: 835 SAIMEW 840
>AT5G61550.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751805 FORWARD
LENGTH=860
Length = 860
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 11 PHLFRCPISLDLFEDPVTLCTGHTYDRSSIEKWLSAGNLTCPVTMQKLHDPSIVPNHTLR 70
P F CP+ + +P G+TYDR +IE+WL + T PVT L + +++ N+TL
Sbjct: 776 PSHFICPLLKGVMNEPCVAADGYTYDREAIEEWLRQKD-TSPVTNLPLPNKNLIANYTLY 834
Query: 71 HLIDQW 76
I +W
Sbjct: 835 SAIMEW 840