Miyakogusa Predicted Gene

Lj1g3v1301650.4

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1301650.4 Non Chatacterized Hit- tr|H9WGG1|H9WGG1_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda GN=2,56.1,5e-18,zinc
finger,Zinc finger, CCCH-type; seg,NULL; no description,NULL; CCCH
zinc finger,NULL; ZF_C3H1,Zi,CUFF.27095.4
         (1052 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G18640.1 | Symbols:  | Zinc finger C-x8-C-x5-C-x3-H type fami...   161   3e-39
AT3G26850.2 | Symbols:  | histone-lysine N-methyltransferases | ...    99   2e-20
AT3G26850.1 | Symbols:  | histone-lysine N-methyltransferases | ...    99   2e-20
AT2G33835.1 | Symbols: FES1 | Zinc finger C-x8-C-x5-C-x3-H type ...    84   5e-16

>AT3G18640.1 | Symbols:  | Zinc finger C-x8-C-x5-C-x3-H type family
            protein | chr3:6413617-6415829 REVERSE LENGTH=676
          Length = 676

 Score =  161 bits (407), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/356 (34%), Positives = 174/356 (48%), Gaps = 64/356 (17%)

Query: 703  VQVAPGQGFNQN--SLHSSSGYTIGQSQVAVPILPSRGGILDGTHNHEVSTEKKYLAEPS 760
            V VAP + FNQN  +L   S  T G SQ  +    +         N  V +    L    
Sbjct: 377  VNVAPVETFNQNHNALPYQSSLTAGGSQQVLAAAAT---------NFSVGSNLSNLESGK 427

Query: 761  IMDGGLSQVISTPT--QNMVSKEQIAQLTNLSASLAHILGTGQQLPQLYAALNSHDLKDT 818
            +        +  P   QN VS+EQI Q+TN+SASLA  L  GQ +PQL  AL        
Sbjct: 428  VYQDNHHSTVEKPVLVQNTVSREQIDQITNISASLAQFLANGQPIPQLEQAL-------- 479

Query: 819  PSLAKTEVPSMPVSNTSINPDPAVGLPQQYDPTSDSIEPNADAKKVSAAIPATKRIAEPA 878
                      +P+ + S+ P+ A          S+ +  N                    
Sbjct: 480  ---------QLPLHSESVQPNQAT-------TQSNVVSSN-------------------- 503

Query: 879  AEIPSQLPDSGRQSRGDSIKPASSELVKSDKIIQ---LQPGKNFDVNKDKSGVLAAERRR 935
               P+QL   G  +  + +   ++  + + + IQ   L P +N D   D++     E ++
Sbjct: 504  ---PNQLWGLGMSTGAEGVPAVTASKISNVEEIQEVSLDPKENGDKKTDEAS-KEEEGKK 559

Query: 936  NSRDAHKNTKEDGPLDNMDQPGGPDEAKKTKDVKELRAFKFSLADLVKELLKPAWKEGQV 995
               D +         ++ D  G  +E KK KD K +RAFKF+L ++VKELLKPAWKEG++
Sbjct: 560  TGEDTNDAENVVDEDEDGDDDGSDEENKKEKDPKGMRAFKFALVEVVKELLKPAWKEGKL 619

Query: 996  NKEDFKTIVKKVVEKVSGTMQGSQIPQTKEKIDQYLSVSRTKLTKLVQAYVEKVQK 1051
            NK+ +K IVKKV EKV+GTMQ   +PQT+EKID YLS S+ KLTKLVQAYV K++K
Sbjct: 620  NKDGYKNIVKKVAEKVTGTMQSGNVPQTQEKIDHYLSASKPKLTKLVQAYVGKIKK 675



 Score = 54.7 bits (130), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 73/163 (44%), Gaps = 28/163 (17%)

Query: 115 DSGINDRIRTRVGGSSQPCRDFASGTCRRGSLCNFLHHDNQNPENSWESKHREDGAPRYS 174
           D+G  DR +TR   S  P R+F     +RGS  + L   +++    WE   R+   PR +
Sbjct: 104 DAGSYDRHKTRTQVSPTPIREF----NKRGS--DHLFDQSRSDHYGWEDNIRK---PRET 154

Query: 175 DTHESRDHSFRSGRANEACINFAKGRCRQGSSCKFVHHNNSDGYGKVSGDELTREKEIDK 234
             H      FR     EA +  A+             +NN+D     S     R +   +
Sbjct: 155 KYHTD---DFRE----EAMMEGARSS----------DYNNTDYPEDNSRIRRRRSEFTGE 197

Query: 235 RRGDSSFEQGGRHGPNRSSDIPCKFFANGN--CRNGKYCRFSH 275
           +         G  G +RSS+IPCKFFA G   CRNGKYCRFSH
Sbjct: 198 KETQRRDGGDGEGGFHRSSNIPCKFFAAGTGFCRNGKYCRFSH 240


>AT3G26850.2 | Symbols:  | histone-lysine N-methyltransferases |
            chr3:9896541-9897415 REVERSE LENGTH=265
          Length = 265

 Score = 99.0 bits (245), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 44/84 (52%), Positives = 65/84 (77%)

Query: 969  KELRAFKFSLADLVKELLKPAWKEGQVNKEDFKTIVKKVVEKVSGTMQGSQIPQTKEKID 1028
            + ++ FK  L   VK+LLKP+W++G ++KE FKTIVK+VV+KVS +M+G +IP+++ KID
Sbjct: 182  RSMKLFKVVLTKFVKDLLKPSWRQGNMSKEAFKTIVKRVVDKVSNSMEGRRIPKSRAKID 241

Query: 1029 QYLSVSRTKLTKLVQAYVEKVQKA 1052
            +Y+  S+ KLTKLV  YV+K  KA
Sbjct: 242  KYIDSSQQKLTKLVMGYVDKYVKA 265


>AT3G26850.1 | Symbols:  | histone-lysine N-methyltransferases |
            chr3:9896541-9897415 REVERSE LENGTH=265
          Length = 265

 Score = 99.0 bits (245), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 44/84 (52%), Positives = 65/84 (77%)

Query: 969  KELRAFKFSLADLVKELLKPAWKEGQVNKEDFKTIVKKVVEKVSGTMQGSQIPQTKEKID 1028
            + ++ FK  L   VK+LLKP+W++G ++KE FKTIVK+VV+KVS +M+G +IP+++ KID
Sbjct: 182  RSMKLFKVVLTKFVKDLLKPSWRQGNMSKEAFKTIVKRVVDKVSNSMEGRRIPKSRAKID 241

Query: 1029 QYLSVSRTKLTKLVQAYVEKVQKA 1052
            +Y+  S+ KLTKLV  YV+K  KA
Sbjct: 242  KYIDSSQQKLTKLVMGYVDKYVKA 265


>AT2G33835.1 | Symbols: FES1 | Zinc finger C-x8-C-x5-C-x3-H type
            family protein | chr2:14312145-14314566 REVERSE
            LENGTH=587
          Length = 587

 Score = 84.0 bits (206), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 9/118 (7%)

Query: 935  RNSRDAHKNTKEDGPLDNMDQPGGPDEAKKTKDVKELRAFKFSLADLVKELLKPAWKEGQ 994
            R+   ++K TK+   +D         E +    +K +R F+ ++ + +KE+LKP W+EG+
Sbjct: 477  RSDGSSYKKTKKSDEIDG--------EVRSDAGMKVMRLFRTAVVETIKEMLKPLWREGR 528

Query: 995  VNKEDFKTIVKKVVEKVSG-TMQGSQIPQTKEKIDQYLSVSRTKLTKLVQAYVEKVQK 1051
            + K+    IVKK  EKV G  +Q  Q+P   E +DQYL +S T++ KLV+ YVEK  K
Sbjct: 529  LTKDVHNMIVKKAAEKVVGAAVQFHQVPTDTESVDQYLGLSGTRIVKLVEGYVEKYGK 586