Miyakogusa Predicted Gene

Lj1g3v1290390.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1290390.1 Non Chatacterized Hit- tr|D5AE51|D5AE51_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,35.83,2e-16,TPR,Tetratricopeptide repeat;
TPR_REGION,Tetratricopeptide repeat-containing domain;
Tetratricopepti,gene.g31104.t1.1
         (959 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G18730.1 | Symbols: TSK, MGO3, BRU1 | tetratricopeptide repea...   365   e-101

>AT3G18730.1 | Symbols: TSK, MGO3, BRU1 | tetratricopeptide repeat
            (TPR)-containing protein | chr3:6446062-6453045 REVERSE
            LENGTH=1311
          Length = 1311

 Score =  365 bits (938), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 229/555 (41%), Positives = 304/555 (54%), Gaps = 54/555 (9%)

Query: 445  IFHIKCAGRDLESLEPIEKLKEHLGNDTFEASIEGCVQKRLIKIYVDCCTELSKVPNIKV 504
            I H++  GR L+ LE    L++   N   EAS++G V KRL+K+Y+DCC  LS+ P++K+
Sbjct: 771  IHHLEYGGRVLKPLELYAILRDSSENVVIEASVDGWVHKRLMKLYMDCCQSLSEKPSMKL 830

Query: 505  LKKLYNLEVSDDEIVVSDCDLQDLSITPLINALQSQKEFAMLDISHNLLGNGVMEKLKKV 564
            LKKLY  EV DD I VS+C+LQD+S  PL+ AL      AMLD+SHN+LGNG MEKLK++
Sbjct: 831  LKKLYISEVEDD-INVSECELQDISAAPLLCALHVHN-IAMLDLSHNMLGNGTMEKLKQL 888

Query: 565  FSALNQSYGGLTLDLHCNRFGPTALFQISECSALFTRLGVLNISGNRLTDACRSYLLTIL 624
            F++ +Q YG LTLDLHCNRFGPTALFQI EC  LFTRL VLN+S NRLTDAC SYL TI+
Sbjct: 889  FASSSQMYGALTLDLHCNRFGPTALFQICECPVLFTRLEVLNVSRNRLTDACGSYLSTIV 948

Query: 625  KS-----------------------------------CTGHXXXXXXXXXXXXXXXXXTL 649
            K+                                   C G+                 TL
Sbjct: 949  KNCRALYSLNVEHCSLTSRTIQKVANALDSKSGLSQLCIGYNNPVSGSSIQNLLAKLATL 1008

Query: 650  KRFSELNMRGLKLGKPVVHSLCQXXXXXXXXXXXXXXXXXXXXXXXXXAESLVKGTEELV 709
              F+EL+M G+KL   VV SL                            ESL    EE V
Sbjct: 1009 SSFAELSMNGIKLSSQVVDSLYALVKTPSLSKLLVGSSGIGTDGAIKVTESLCYQKEETV 1068

Query: 710  KLDQSYCGLTSKYI--LNTNVNFLCSIVDLNLEGNPLMREGSNTLFSLLTNTQCSLKVLV 767
            KLD S CGL S +   LN +V    SI++ N+ GNP+  EG + L  LL N   ++KVL+
Sbjct: 1069 KLDLSCCGLASSFFIKLNQDVTLTSSILEFNVGGNPITEEGISALGELLRNPCSNIKVLI 1128

Query: 768  LRKCKLGCDGVLHIIEALADNSCLEELDLADNSVPNELSALQNDLSVRRCSQNQDQ-KLD 826
            L KC L   G+L II+AL+DN  LEEL+L+DN+   + +     +  R     Q+     
Sbjct: 1129 LSKCHLKLAGLLCIIQALSDNKNLEELNLSDNAKIEDETVFGQPVKERSVMVEQEHGTCK 1188

Query: 827  NMKVDDHQEVICSLNTVCNQLEVADSEDEESPFRVEGTASGIDDSCASSGQRNSSSPECH 886
            ++   D ++ +C  N  C+ LEVADSEDE+     EGTA+    S  S  ++N      H
Sbjct: 1189 SVTSMDKEQELCETNMECDDLEVADSEDEQIE---EGTATS---SSLSLPRKN------H 1236

Query: 887  FTKQLSIAIGKARSLELLDLSNNGFSAQVAEAFY--GSWKTLRPLSSQKHITGKIIHLST 944
              K+LS A+  A  L++LDLSNNGFS +  E  Y   S  + R   +Q+H+  + +H   
Sbjct: 1237 IVKELSTALSMANQLKILDLSNNGFSVEALETLYMSWSSSSSRTGIAQRHVKEETVHFYV 1296

Query: 945  NERRCCGVKPCCKKD 959
              + CCGVK CC+KD
Sbjct: 1297 EGKMCCGVKSCCRKD 1311



 Score =  273 bits (697), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 178/473 (37%), Positives = 261/473 (55%), Gaps = 73/473 (15%)

Query: 1   MDLAMTLKENRPNNKS--YLKEYIDAHNNMGMLEVELENWHDAMSILVKGLKICDEEEIS 58
           M+LA  LKE  P  +S  +L+EYI+AHNN+GML+++L+N   A +IL KGL+ICDEEE+ 
Sbjct: 141 MELAQILKEKPPPGESSGFLEEYINAHNNIGMLDLDLDNPEAARTILKKGLQICDEEEVR 200

Query: 59  DNDDGRSRLHHNLGRVYMELRAWDKARKHMEKDIHICNRIGHRQGEAKGYINLGEMHYRI 118
           + D  RSRLHHNLG V+M LR+WD+A+KH+E DI+IC++I H QGEAKGYINL E+H + 
Sbjct: 201 EYDAARSRLHHNLGNVFMALRSWDEAKKHIEMDINICHKINHVQGEAKGYINLAELHNKT 260

Query: 119 QMYEEANSYYEKALTLVRILEDEEALMEQCNENIKIVKEAVKVMKAITREEQNLKKLKRD 178
           Q Y +A   Y KA +L + ++DE AL+EQ   N KIVK+++KVM+ +  EE  LKKL  +
Sbjct: 261 QKYIDALLCYGKASSLAKSMQDESALVEQIEHNTKIVKKSMKVMEELREEELMLKKLSAE 320

Query: 179 KTNARGTPDEQKFLVLQNETLDRLIEKAGMIFAWEKGQALVK------------------ 220
            T+A+GT +E+K ++  N  L  LI+K+ M+FAW K     K                  
Sbjct: 321 MTDAKGTSEERKSMLQVNACLGSLIDKSSMVFAWLKHLQYSKRKKKISDELCDKEKLSDA 380

Query: 221 -INIGNILDSTQNWRGAL----------------------------------------DA 239
            + +G    + +N+R +L                                         A
Sbjct: 381 FMIVGESYQNLRNFRKSLKWFIRSYEGHEAIGNLEGQALAKINIGNGLDCIGEWTGALQA 440

Query: 240 YQDSYRIAVEAKLPDVQINALENMHYSNMIRFDNEDETWRXXXXXXXXXXXXXXXXAKTM 299
           Y++ YRIA++A LP +Q++ALE++HY +M+RF N  +                   A+  
Sbjct: 441 YEEGYRIALKANLPSIQLSALEDIHYIHMMRFGNAQKASELKETIQNLKESEHAEKAECS 500

Query: 300 PEDRCSETDTEAD-HLSDGGSDDFCIPKTIS--RSKSRTTGEEFTDDVPLMSIYQSIKGS 356
            +D CSETD+E   ++S+   +    P+T +  RS+     +E  DDVPL+S  Q  K  
Sbjct: 501 TQDECSETDSEGHANVSNDRPNACSSPQTPNSLRSERLADLDEANDDVPLISFLQPGKRL 560

Query: 357 SKKN--TDHMDSLTNSSKQAQLSPKSMTNLTSSHQTANNRKRVLVI-SDDEEE 406
            K+   +   D+ T+ +K      K  + +  S QT   RKR+ VI SDDE E
Sbjct: 561 FKRKQVSGKQDADTDQTK------KDFSVVADSQQTVAGRKRIRVILSDDESE 607