Miyakogusa Predicted Gene

Lj1g3v1289240.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1289240.1 tr|B7G894|B7G894_PHATC Predicted protein
OS=Phaeodactylum tricornutum (strain CCAP 1055/1)
GN=PHATRD,31.53,0.000000000000001,OXIDATION RESISTANCE PROTEIN 1,NULL;
NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR
COACTIVATOR-RELATED,NULL;,CUFF.27077.1
         (519 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G39590.1 | Symbols:  | TLD-domain containing nucleolar protei...   587   e-168

>AT5G39590.1 | Symbols:  | TLD-domain containing nucleolar protein |
           chr5:15851483-15853768 FORWARD LENGTH=542
          Length = 542

 Score =  587 bits (1514), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 284/519 (54%), Positives = 375/519 (72%), Gaps = 20/519 (3%)

Query: 1   MGASNSAEPKLSPEQREAESIAASTGALPMLQKAFSKLANPESNTVPLQNLQQCFGLNRE 60
           MGAS+S + K S E+RE ES+AASTGALP+L+++FSKL + ++NTVP Q+L+Q FGL   
Sbjct: 1   MGASSSTDDKESSEKREIESLAASTGALPLLKRSFSKLVDSQTNTVPFQSLKQSFGL--- 57

Query: 61  GGSYNT------ENAPDSFPVLLDQLGSSLVDQFFVPDKEGISWIEFVKGYNNCCARVSA 114
             SY+T      +   D FP LL+ LGSSLVD FFVPDKEG+SW+EF  GY  CC R+S 
Sbjct: 58  --SYDTITTEGEQKVSDLFPKLLEHLGSSLVDLFFVPDKEGLSWVEFASGYVKCCGRMSN 115

Query: 115 SVSLNMVLRLFLALAGKANQPLHLEFESGDSDCKINGYLLPREVFLLLSMCWVMSWGCRG 174
           S+S N +LR++   A  A     LEFES ++DCKING +   E+ + L MCW MSW  R 
Sbjct: 116 SMSFNTLLRVYYVTAKNAGFSPKLEFESDEADCKINGSISVSELLVFLWMCWTMSWDGRS 175

Query: 175 LKG---KGDVSLPDLNHLVLSAIVSCGQVEGG--FNVWDCDILSLEVQLPAGKFVTWVMS 229
            K    KG + LPD++HL+LSA+VSC   E G   +VW+ D+  LE++LP GKF+TW + 
Sbjct: 176 SKAAEMKGCLFLPDISHLILSAVVSCTDSESGNSLDVWETDVSGLELELPIGKFLTWALM 235

Query: 230 TVPCLPDCLRQYFLARLLSAVTTGDELGLSSSSAVGDISSTATHDYILTQGRAWAISITQ 289
           TVPCL +CL  +  +RL +  +  D  G S S+AV D +S  + + +LT GRAWAIS+T 
Sbjct: 236 TVPCLTECLSHFCNSRLQNVTSAEDGSGPSKSTAVDDSASKTSENTLLTCGRAWAISLTS 295

Query: 290 RTTVNEEISRAFISGGDG-IDDNLLYRASAHGRGINRFWSNVEGYKGPLLILVTASSGDA 348
           ++T++EEI  +   G  G  +++LLYR+  HG+G+NR WSNVEGY  P+L++++AS    
Sbjct: 296 KSTISEEILSSCFPGNSGEPNEHLLYRSYYHGKGMNRLWSNVEGYHAPILVIISAS---C 352

Query: 349 DESHESSSTNRKWVLGALTDQGLENKDIFYGNSGCLYSISPVFHAFPPSGKEKNFVYSHL 408
              HE++S+ RKWV+GA+  QG EN+D FYG+SG L+SISPVFHAF  SGKEKNF YSHL
Sbjct: 353 KVEHEATSSERKWVIGAILQQGFENRDAFYGSSGNLFSISPVFHAFSSSGKEKNFAYSHL 412

Query: 409 HPTGKGYQPHPKPAGVAFGGTPGNERIFMDDDFSKLTVRHHAVDKTYQSGSLIPDQGFLP 468
           HP G  Y  HPKP G+ FGGT GNERIF+D+DF+K+TVRHHAVDKTYQSGSL P+QG+LP
Sbjct: 413 HPAGGVYDAHPKPVGIGFGGTLGNERIFIDEDFAKITVRHHAVDKTYQSGSLFPNQGYLP 472

Query: 469 VEALISEVEVWGLGGNAAKDVQNSYKRREELFTEQRRKV 507
           VEAL+ ++E WGLGGN A+++Q  Y++REELFT QRRK+
Sbjct: 473 VEALVLDIEAWGLGGNKAREIQQKYQKREELFTNQRRKI 511