Miyakogusa Predicted Gene
- Lj1g3v1289060.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v1289060.1 Non Chatacterized Hit- tr|K4A077|K4A077_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si032264,27.2,7e-19,OS12G0289800 PROTEIN,NULL; FAMILY NOT
NAMED,NULL; seg,NULL; PPR,Pentatricopeptide repeat;
PPR_2,Pent,CUFF.27062.1
(264 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 5e-72
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 2e-36
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 146 1e-35
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 1e-35
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 2e-34
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 4e-34
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 141 4e-34
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 7e-33
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 1e-32
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 1e-32
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 136 2e-32
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 4e-32
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 6e-32
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 7e-32
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 1e-31
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 2e-31
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 2e-31
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 131 5e-31
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 6e-31
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 7e-31
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 7e-31
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 8e-31
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 8e-31
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 9e-31
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 2e-30
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 128 4e-30
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 4e-30
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 9e-30
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 126 1e-29
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 1e-29
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 2e-29
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 3e-29
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 3e-29
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 124 5e-29
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 5e-29
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 6e-29
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 7e-29
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 8e-29
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 124 9e-29
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 1e-28
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 2e-28
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 2e-28
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 2e-28
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 2e-28
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 3e-28
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 3e-28
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 4e-28
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 6e-28
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 7e-28
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 8e-28
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 2e-27
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 2e-27
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 2e-27
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 2e-27
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 3e-27
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 3e-27
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 9e-27
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 1e-26
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 2e-26
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 2e-26
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 3e-26
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 3e-26
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 4e-26
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 4e-26
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 7e-26
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 7e-26
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 1e-25
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 1e-25
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 112 2e-25
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 8e-25
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 8e-25
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 8e-25
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 9e-25
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 110 1e-24
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 2e-24
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 2e-24
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 3e-24
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 3e-24
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 3e-24
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 4e-24
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 4e-24
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 5e-24
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 1e-23
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 1e-23
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 2e-23
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-23
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-23
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 3e-23
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 4e-23
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 5e-23
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 5e-23
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 5e-23
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 6e-23
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 7e-23
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 102 2e-22
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 101 5e-22
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 5e-22
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 7e-22
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 8e-22
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 9e-22
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 5e-21
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 5e-21
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 98 6e-21
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 6e-21
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 8e-21
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 97 1e-20
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 97 1e-20
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 97 1e-20
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 96 2e-20
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 2e-20
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 4e-20
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 95 4e-20
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 5e-20
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 5e-20
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 5e-20
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 6e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 93 1e-19
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 2e-19
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 3e-19
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 3e-19
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 3e-19
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 91 7e-19
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 91 7e-19
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 9e-19
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 2e-18
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 4e-18
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 5e-18
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 5e-18
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 87 1e-17
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 2e-17
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 5e-17
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 5e-17
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 85 5e-17
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 7e-17
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 82 2e-16
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 3e-16
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 3e-16
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 81 7e-16
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 81 8e-16
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 8e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 9e-16
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 9e-16
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 6e-15
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 7e-15
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 7e-15
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 7e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 76 2e-14
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 3e-14
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 75 4e-14
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 5e-14
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 5e-14
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 5e-14
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 7e-14
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 8e-14
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 74 8e-14
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 74 9e-14
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 1e-13
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 3e-13
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 72 4e-13
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 72 5e-13
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 6e-13
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 8e-13
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 9e-13
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 1e-12
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-12
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 2e-12
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 3e-12
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 69 4e-12
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 69 4e-12
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 68 5e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 68 5e-12
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 66 2e-11
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 2e-11
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 66 3e-11
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 3e-11
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 3e-11
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 65 4e-11
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 5e-11
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 7e-11
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 7e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 9e-11
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 1e-10
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 64 1e-10
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 64 2e-10
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 63 2e-10
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 63 2e-10
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 3e-10
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 5e-10
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 62 5e-10
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 6e-10
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 6e-10
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 7e-10
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 60 2e-09
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 60 2e-09
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 59 3e-09
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 58 7e-09
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 8e-09
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 8e-09
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 8e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 57 9e-09
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 57 1e-08
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 57 1e-08
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 5e-08
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 54 7e-08
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 54 8e-08
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 8e-08
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 9e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 9e-08
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 1e-07
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 2e-07
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 2e-07
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 53 2e-07
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 53 3e-07
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 52 4e-07
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 52 6e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 6e-07
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 6e-07
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 51 7e-07
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 8e-07
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 8e-07
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 9e-07
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 9e-07
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 9e-07
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 9e-07
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-06
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-06
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 50 1e-06
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 50 1e-06
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 50 2e-06
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 49 3e-06
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 3e-06
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 4e-06
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 5e-06
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 48 6e-06
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 48 6e-06
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 7e-06
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 267 bits (683), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 170/238 (71%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
SF L PN +T+N LIDGH S+GN +EA ++ M + GL P+EV+YG LL+GL K+++F
Sbjct: 366 SFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFD 425
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
L RM+ NGV VG I+YT MIDGLCKN L+EAV LL++M K I+PD+VT+S LI
Sbjct: 426 LARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 485
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
NGF + G+ AKEI+C++Y+ L N I+YSTLIYN C+M LKEA+ Y M GH
Sbjct: 486 NGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHT 545
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
DHFT NVLV + C++G++ EAE FM M+ G+ P+T +FDC+IN YGNSG+ LKAF
Sbjct: 546 RDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 603
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 114/232 (49%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
ITY +IDG C G ++EA LL+EM G+ P+ VTY AL+NG K +F + R
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
+ G+ I Y+ +I C+ L+EA+ + + M+ D TF+VL+ +AGK
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
+ A+E M M ++ N + + LI Y +A + + M GH FT
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
L+ C+ G L+EAE F+ + + T ++ ++ + SG+ KA L
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 675
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 120/262 (45%), Gaps = 35/262 (13%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ T+N LI+ C++G+ E++ L+ +M G P VTY +L+ K +F
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 290
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L+ M+ GV +Y +I LC++ + + LL DM K I+P+ VT++ LINGF
Sbjct: 291 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 350
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK+ A +++ +M L N++ ++ LI + N KEAL + +M G +
Sbjct: 351 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 410
Query: 206 CNVLV------ATF-----------------------------CRSGRLKEAEYFMDHMS 230
VL+ A F C++G L EA ++ MS
Sbjct: 411 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 470
Query: 231 RMGLDPSTSAFDCIINSYGNSG 252
+ G+DP + +IN + G
Sbjct: 471 KDGIDPDIVTYSALINGFCKVG 492
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 112/255 (43%), Gaps = 35/255 (13%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHG--------------------------- 58
P +TYNT++ +C KG + A LLD M S G
Sbjct: 266 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL 325
Query: 59 --------LKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCK 110
+ PNEVTY L+NG S K + S L M G+ H+++ A+IDG
Sbjct: 326 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 385
Query: 111 NRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNIL 170
+EA+ + M + P V++ VL++G + + + A+ +M + + + I
Sbjct: 386 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 445
Query: 171 YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMS 230
Y+ +I CK L EA+ M+ G D T + L+ FC+ GR K A+ + +
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 505
Query: 231 RMGLDPSTSAFDCII 245
R+GL P+ + +I
Sbjct: 506 RVGLSPNGIIYSTLI 520
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 7/244 (2%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S +LPN ++++ LI+G+ + G +AF + DEM G P TYG+LL GL K
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
L+ + V + Y ++ +CK+ L +AV L +M++ SI PD T++ LI
Sbjct: 636 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695
Query: 141 NGFLRAGK----INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNH 196
+G R GK I AKE + ++ N ++Y+ + K K + M++
Sbjct: 696 SGLCRKGKTVIAILFAKEAEA---RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 752
Query: 197 SGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALK 256
GH D T N ++ + R G++++ + M P+ + ++ +++ Y D
Sbjct: 753 LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVST 812
Query: 257 AFFL 260
+F L
Sbjct: 813 SFLL 816
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
T+N LI C+ G I AF L+ M S G+ ++ T A+++ L+++ +F L M
Sbjct: 866 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 925
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
G+ Y +I+GLC+ ++ A + ++M+ I P V S ++ + GK
Sbjct: 926 SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKA 985
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
+ A ++ M K LV ++TL++ CK N+ EAL VM++ G D + NVL
Sbjct: 986 DEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1045
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
+ C G + A + M G + + + +I
Sbjct: 1046 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1081
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 35/235 (14%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T N +IDG+ G IE+ LL EM + PN TY LL+G SK
Sbjct: 757 PDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL 816
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ +NG+ ++ +++ G+C++ +LE + +L + + D TF++LI+
Sbjct: 817 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 876
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G+IN A +++ VM G D T
Sbjct: 877 NGEINWAFDLV-----------------------------------KVMTSLGISLDKDT 901
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
C+ +V+ R+ R +E+ + MS+ G+ P + + +IN GD AF +
Sbjct: 902 CDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVV 956
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ T N ++ G + L EM+ + P+ T+ L+N L F S
Sbjct: 196 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 255
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+++M +G ++Y ++ CK + A+ LLD M ++ DV T+++LI+ R
Sbjct: 256 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 315
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+ +I ++ M K ++ N + Y+TLI + + A M G +H T
Sbjct: 316 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 375
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
N L+ G KEA M GL PS ++ +++
Sbjct: 376 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 110/237 (46%), Gaps = 3/237 (1%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N Y+ LI + +G I+++ + M +G P+ T A+L + K + V S L
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+ M + ++ +I+ LC E++ +L+ M K+ P +VT++ +++ + +
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G+ A E++ M + + Y+ LI++ C+ + + M + T
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN---SYGNSGDALKAFFL 260
N L+ F G++ A ++ M GL P+ F+ +I+ S GN +ALK F++
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 398
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 121/223 (54%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P IT NTL++G C G + +A L+D MV G +PNEVTYG +LN + K + L
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L +M +++ + Y+ +IDGLCK+ L+ A +L ++M D++T++ LI GF
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AG+ ++ +++ M K + N + +S LI ++ K L+EA M G + T
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
N L+ FC+ RL+EA +D M G DP F+ +IN Y
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 120/232 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN ITYN+LIDG C + +EEA +++D M+S G P+ +T+ L+NG K ++
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M + GV ++Y ++ G C++ LE A L +M+ + PD+V++ +L++G
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G++ A EI K+ K+ + L+ +Y +I+ C + +A + + + G D
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
N++++ CR L +A+ M+ G P ++ +I ++ DA A
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTA 597
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 116/211 (54%), Gaps = 2/211 (0%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ ITYNTLI G C+ G ++ +LL +M+ + PN VT+ L++ K K L
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+ M G+ I+Y ++IDG CK LEEA+ ++D M+ +PD++TF++LING+ +A
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
+I++ E+ +M ++ N + Y+TL+ +C+ L+ A + M D +
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 207 NVLVATFCRSGRLKEA-EYFMD-HMSRMGLD 235
+L+ C +G L++A E F S+M LD
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 1/234 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T+N LI+G+C I++ L EM G+ N VTY L+ G + K +
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M VR +SY ++DGLC N LE+A+ + + K+ + D+ + ++I+G
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A K+++A ++ C + + L+ Y+ +I C+ +L +A + M GH D T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFF 259
N+L+ A ++ M G S +IN +SG+ K+F
Sbjct: 581 YNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML-SSGELDKSFL 633
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 113/228 (49%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
T + +I+ C + AF + +++ G +P+ V + LLNGL + ++RM
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRM 184
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
G + I+ +++GLC N + +AV L+D M++ P+ VT+ ++N ++G+
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A E++ KM + + L+ + YS +I CK +L A N + M G +D T N L
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ FC +GR + + M + + P+ F +I+S+ G +A
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 92/216 (42%)
Query: 45 EEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAM 104
++A L +M+ P + + L + ++K ++ LV + ++M G+ + + M
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 105 IDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVL 164
I+ C+ R L A + ++K PD V F+ L+NG +++ A E++ +M +
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 165 VLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEY 224
I +TL+ C + +A+ M +G + T ++ C+SG+ A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 225 FMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+ M + + II+ G AF L
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNL 285
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 118/208 (56%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ P+ ITY+ +ID C G +A +LL +M+ + P+ VT+ AL+N L K K
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAE 166
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
M G+ I+Y +MIDG CK L +A +LD M S +PDVVTFS LING+
Sbjct: 167 EIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGY 226
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+A +++N EI C+M++ +V N + Y+TLI+ +C++ +L A + VM SG ++
Sbjct: 227 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNY 286
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSR 231
T ++A+ C L++A ++ + +
Sbjct: 287 ITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 110/223 (49%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
Y T+I+G C G+ E A LL +M +K + V Y A+++ L K + M
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
G+ I+Y+ MID C++ +A LL DM++ INPDVVTFS LIN ++ GK++
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLV 210
A+EI M + + I Y+++I +CK L +A M D T + L+
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Query: 211 ATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
+C++ R+ M R G+ +T + +I+ + GD
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 266
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 4/223 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T+ TL++G C +G + +A L+D MV G +P YG ++NGL K +
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L +M ++ + Y A+ID LCK+ A +L +M I PDV+T+S +I+ F R
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+G+ +A++++ M + + + + +S LI K + EA Y M G T
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
N ++ FC+ RL +A+ +D M+ P F +IN Y
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGY 226
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ P ITYN++IDG C + + +A R+LD M S P+ VT+ L+NG K +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
M G+ ++YT +I G C+ L+ A LL+ M+ + + P+ +TF ++
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 144 LRAGKINNAKEIMCKMYKT 162
++ A I+ + K+
Sbjct: 297 CSKKELRKAFAILEDLQKS 315
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 4/169 (2%)
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
M G R +++T +++GLC + +A+ L+D M++ P + +ING + G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
+A ++ KM +T + + ++Y+ +I CK + A N + M+ G D T +
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
++ +FCRSGR +AE + M ++P F +IN+ G +A
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEA 165
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 126/237 (53%), Gaps = 3/237 (1%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
+PN +TYNTLI G C KG +++A LL+ MVS PN+VTYG L+NGL K +
Sbjct: 289 VPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVR 348
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L M G + Y+ +I GL K EEA+ L M + P++V +SVL++G
Sbjct: 349 LLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC 408
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
R GK N AKEI+ +M + + N YS+L+ + K +EA+ + M+ +G + F
Sbjct: 409 REGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKF 468
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY---GNSGDALKAF 258
+VL+ C GR+KEA M +G+ P T A+ II G+ ALK +
Sbjct: 469 CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLY 525
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 117/228 (51%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
LP+ TY TL+DG C + I+EA LLDEM S G P+ V Y L++GL K V+
Sbjct: 219 LPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTK 278
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
++ M + G ++Y +I GLC L++AV LL+ M+ + P+ VT+ LING +
Sbjct: 279 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV 338
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ + +A ++ M + LN +YS LI K +EA++ + M G +
Sbjct: 339 KQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIV 398
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+VLV CR G+ EA+ ++ M G P+ + ++ + +G
Sbjct: 399 VYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTG 446
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 108/235 (45%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N+ PN +++N +I C ++ A + M P+ TY L++GL K +
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
L+ M+ G + Y +IDGLCK L L+D+M P+ VT++ LI+G
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
GK++ A ++ +M + + N++ Y TLI K R +A+ + M G+ +
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+VL++ + G+ +EA M+ G P+ + +++ G +A
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA 416
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 6/235 (2%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
Y+ LI G +G EEA L +M G KPN V Y L++GL + K L RM
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
+G +Y++++ G K L EEAV + +M K + + +SVLI+G G++
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVM---NHSGHVSDHFTCN 207
A + KM + + + YS++I C + ++ AL Y M D T N
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 208 VLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY---GNSGDALKAFF 259
+L+ C + A ++ M G DP + +N+ NS D ++F
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFL 599
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S +PN +TY TLI+G + +A RLL M G N+ Y L++GL K K
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
S +M G + + Y+ ++DGLC+ EA +L+ M+ + P+ T+S L+
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
GF + G A ++ +M KT N YS LI C + +KEA+ ++ M G
Sbjct: 440 KGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIK 499
Query: 201 SDHFTCNVLVATFCRSGRLKEA 222
D + ++ C G + A
Sbjct: 500 PDTVAYSSIIKGLCGIGSMDAA 521
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 87/202 (43%)
Query: 59 LKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAV 118
+ PN +++ ++ L K M +Y ++DGLCK ++EAV
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 119 HLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNY 178
LLD+M +P V ++VLI+G + G + +++ M+ V N + Y+TLI+
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 179 CKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPST 238
C L +A++ M S + + T L+ + R +A + M G +
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 239 SAFDCIINSYGNSGDALKAFFL 260
+ +I+ G A +A L
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSL 384
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 3/138 (2%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
LPN TY++L+ G G EEA ++ EM G N+ Y L++GL +
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMM 488
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDML---KASINPDVVTFSVLIN 141
+M G++ ++Y+++I GLC ++ A+ L +ML + PDVVT+++L++
Sbjct: 489 VWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLD 548
Query: 142 GFLRAGKINNAKEIMCKM 159
G I+ A +++ M
Sbjct: 549 GLCMQKDISRAVDLLNSM 566
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TYN L+DG C + +I A LL+ M+ G P+ +T LN LS+ S
Sbjct: 538 PDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKS-------- 589
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
N G ++ L K + + A +++ ML + P T+++++ +
Sbjct: 590 ------NSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICK 643
Query: 146 AGKINNA 152
KIN A
Sbjct: 644 PKKINAA 650
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 124/223 (55%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ IT NTL++G C G EA L+D+MV +G +PN VTYG +LN + K + L
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L +M +++ + Y+ +IDGLCK+ L+ A +L ++M I +++T+++LI GF
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AG+ ++ +++ M K + N + +S LI ++ K L+EA + M H G D T
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
L+ FC+ L +A +D M G DP+ F+ +IN Y
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 120/235 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ ITY +LIDG C + ++++A +++D MVS G PN T+ L+NG K ++
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+M + GV ++Y +I G C+ L A L +M+ + P++VT+ +L++G
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G+ A EI K+ K+ + L+ +Y+ +I+ C + +A + + + G T
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 545
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
N+++ C+ G L EAE M G P ++ +I ++ GDA K+ L
Sbjct: 546 YNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 115/236 (48%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N+ + + Y+ +IDG C G+++ AF L +EM G+ N +TY L+ G ++
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ L M + ++++ +ID K L EA L +M+ I PD +T++ LI+G
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
F + ++ A +++ M N ++ LI YCK + + L + M+ G V+D
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
T N L+ FC G+L A+ M + P+ + +++ ++G++ KA
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 116/231 (50%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N T + +I+ C + AF + +++ G +PN +T+ L+NGL + +
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+RM G + I+ +++GLC + EA+ L+D M++ P+ VT+ ++N ++
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G+ A E++ KM + + L+ + YS +I CK +L A N + M G ++ T
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
N+L+ FC +GR + + M + ++P+ F +I+S+ G +A
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 35/216 (16%)
Query: 45 EEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAM 104
++A L +M+ P + + L + ++K ++ LV + ++M + G+ + + M
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 105 IDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVL 164
I+ C+ R L A + ++K P+ +TFS LING G+++ A E++ +M +
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM-- 187
Query: 165 VLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEY 224
GH D T N LV C SG+ EA
Sbjct: 188 ---------------------------------GHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 225 FMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+D M G P+ + ++N SG A L
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 67/159 (42%), Gaps = 35/159 (22%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGL---SKHSKFG 80
++ + +TYNTLI G C G + A L EMVS + PN VTY LL+GL + K
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 81 LVSSTLERMRMN--------------------------------GVRVGHISYTAMIDGL 108
+ +E+ +M GV+ G +Y MI GL
Sbjct: 494 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGL 553
Query: 109 CKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAG 147
CK L EA L M + PD T+++LI L G
Sbjct: 554 CKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDG 592
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 132/236 (55%), Gaps = 2/236 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T +L++G C + + +A L+D+MV G KP+ V Y A+++ L K +
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 212
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ + G+R ++YTA+++GLC + +A LL DM+K I P+V+T+S L++ F++
Sbjct: 213 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 272
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK+ AKE+ +M + + + + YS+LI C + EA + +M G ++D +
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA--FF 259
N L+ FC++ R+++ MS+ GL +T ++ +I + +GD KA FF
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 127/235 (54%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ + YN +ID C + +AF E+ G++PN VTY AL+NGL S++ +
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L M + I+Y+A++D KN + EA L ++M++ SI+PD+VT+S LING
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+I+ A ++ M + + + Y+TLI +CK + +++ + + M+ G VS+ T
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
N L+ F ++G + +A+ F M G+ P ++ ++ ++G+ KA +
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 124/235 (52%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY L++G C+ +A RLL +M+ + PN +TY ALL+ K+ K
Sbjct: 223 PNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKEL 282
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E M + ++Y+++I+GLC + ++EA + D M+ DVV+++ LINGF +
Sbjct: 283 FEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK 342
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A ++ + ++ +M + LV N + Y+TLI + + ++ +A ++ M+ G D +T
Sbjct: 343 AKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWT 402
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
N+L+ C +G L++A + M + +D + +I +G +A+ L
Sbjct: 403 YNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+ PN ITY+ L+D G + EA L +EMV + P+ VTY +L+NGL H +
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ + M G +SY +I+G CK + +E+ + L +M + + + VT++ LI G
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
F +AG ++ A+E +M + + Y+ L+ C L++AL + M D
Sbjct: 375 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
T ++ C++G+++EA +S GL P + +++ G
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY++LI+G C I+EA ++ D MVS G + V+Y L+NG K +
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M G+ ++Y +I G + +++A M I+PD+ T+++L+ G
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G++ A I M K + L+ + Y+T+I CK ++EA + + ++ G D T
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGL 234
+++ C G L E E M + GL
Sbjct: 473 YTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
L + ++YNTLI+G C +E+ +L EM GL N VTY L+ G +
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
+M G+ +Y ++ GLC N LE+A+ + +DM K ++ D+VT++ +I G
Sbjct: 387 FFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMC 446
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ GK+ A + C + L + + Y+T++ C L E Y M G + +
Sbjct: 447 KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDC 506
Query: 205 T 205
T
Sbjct: 507 T 507
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 105/215 (48%)
Query: 43 NIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYT 102
+ +A L +MV P+ V + LL+ + K K+ +V S ++M + G+R ++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 103 AMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKT 162
+I+ C + A+ +L MLK PD VT L+NGF R ++++A ++ KM +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 163 VLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEA 222
+ + Y+ +I + CK + + +A + + + G + T LV C S R +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 223 EYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ M + + P+ + +++++ +G L+A
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 76/145 (52%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+ N +TYNTLI G G++++A +M G+ P+ TY LL GL + +
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
E M+ + + ++YT +I G+CK +EEA L + + PD+VT++ +++G
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNN 168
G ++ + + KM + L+ N+
Sbjct: 481 CTKGLLHEVEALYTKMKQEGLMKND 505
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 102/222 (45%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
P+ + +N L+ + L +M G++ + T+ ++N + L S
Sbjct: 82 FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALS 141
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L +M G ++ ++++G C+ + +AV L+D M++ PD+V ++ +I+
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ ++N+A + ++ + + N + Y+ L+ C +A + M +
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
T + L+ F ++G++ EA+ + M RM +DP + +IN
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F + P+ TYN L+ G C G +E+A + ++M + + VTY ++ G+ K K
Sbjct: 394 FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEE 453
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
S + + G++ ++YT M+ GLC LL E L M + + + T S
Sbjct: 454 AWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS---- 509
Query: 142 GFLRAGKINNAKEIMCKM 159
G I + E++ KM
Sbjct: 510 ----DGDITLSAELIKKM 523
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 123/236 (52%), Gaps = 3/236 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +Y L+DG C G I+EA+ +L+EM + GLKPN V + L++ K +
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M G + ++ ++I GLC+ ++ A+ LL DM+ + + VT++ LIN FLR
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G+I A++++ +M L+ I Y++LI C+ + +A + + M GH + +
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG---DALKAF 258
CN+L+ CRSG ++EA F M G P F+ +IN +G D L F
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF 657
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 122/225 (54%), Gaps = 5/225 (2%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
+PN + Y TLI + EA +LL+EM G P+ T+ ++ GL K + +
Sbjct: 249 VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAK 308
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
+ RM + G I+Y +++GLCK ++ A L + K P++V F+ LI+GF+
Sbjct: 309 MVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFV 364
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNI-LYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
G++++AK ++ M + ++ ++ Y++LIY Y K + AL M + G +
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
++ +LV FC+ G++ EA ++ MS GL P+T F+C+I+++
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 110/205 (53%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S ++ N +TYNTLI+ +G I+EA +L++EMV G +E+TY +L+ GL + +
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD 581
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
S E+M +G +IS +I+GLC++ ++EEAV +M+ PD+VTF+ LI
Sbjct: 582 KARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
NG RAG+I + + K+ + + + ++TL+ CK + +A G V
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYF 225
+H T ++L+ + L ++
Sbjct: 702 PNHRTWSILLQSIIPQETLDRRRFY 726
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 107/222 (48%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ T+N+LI G C I+ A LL +M+S G+ N VTY L+N + +
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M G + I+Y ++I GLC+ +++A L + ML+ P ++ ++LING R
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+G + A E +M + + +++LI C+ +++ L + + G D T
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 671
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
N L++ C+ G + +A +D G P+ + ++ S
Sbjct: 672 FNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 124/265 (46%), Gaps = 32/265 (12%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSK--------- 75
+P+ T+N +I G C I EA ++++ M+ G P+++TYG L+NGL K
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 76 ----------------------HSKFGLVSSTLERMRMN-GVRVGHISYTAMIDGLCKNR 112
H + + L M + G+ +Y ++I G K
Sbjct: 344 LFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG 403
Query: 113 LLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYS 172
L+ A+ +L DM P+V ++++L++GF + GKI+ A ++ +M L N + ++
Sbjct: 404 LVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFN 463
Query: 173 TLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRM 232
LI +CK + EA+ + M G D +T N L++ C +K A + + M
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 233 GLDPSTSAFDCIINSYGNSGDALKA 257
G+ +T ++ +IN++ G+ +A
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEA 548
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 100/233 (42%), Gaps = 3/233 (1%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
Y LI + G + RLL +M G+ E + +++ K G + + M
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 90 R-MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
R + SY +++ L + A ++ DML I P + TF V++ F +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
I++A ++ M K V N+++Y TLI++ K + EAL M G V D T N
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG--DALKAFF 259
++ C+ R+ EA ++ M G P + ++N G DA K F
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 122/239 (51%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ ITY +LI C GN+ A LD+M GL PNE TY L++G S+
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L M NG ++Y A+I+G C +E+A+ +L+DM + ++PDVV++S +++GF
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
R+ ++ A + +M + + + I YS+LI +C+ R KEA + Y M G D
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFLCL 262
FT L+ +C G L++A + M G+ P + +IN +A L L
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 123/232 (53%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
+TYNTLI G+C +GN +A + EM+ HGL P+ +TY +L++ + K L++
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
MR+ G+ +YT ++DG + + EA +L +M +P VVT++ LING GK
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
+ +A ++ M + L + + YST++ +C+ ++ EAL M G D T +
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
L+ FC R KEA + M R+GL P + +IN+Y GD KA L
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 123/234 (52%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
LPN +TYNTLIDG+C I++ F+LL M GL+PN ++Y ++NGL + + VS
Sbjct: 237 LPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSF 296
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L M G + ++Y +I G CK +A+ + +ML+ + P V+T++ LI+
Sbjct: 297 VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMC 356
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+AG +N A E + +M L N Y+TL+ + + + EA MN +G
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
T N L+ C +G++++A ++ M GL P ++ +++ + S D +A
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 121/237 (51%), Gaps = 20/237 (8%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ ++Y+T++ G C +++EA R+ EMV G+KP+ +TY +L+ G + +
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
E M G+ +YTA+I+ C LE+A+ L ++M++ + PDVVT+SVLING
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGL 565
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ + AK ++ K++ V +++ Y TLI N C K ++
Sbjct: 566 NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSVVS-------------- 610
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
L+ FC G + EA+ + M P +A++ +I+ + +GD KA+ L
Sbjct: 611 -----LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 114/227 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN TYN LI G C GNI+ A L D+M + G PN VTY L++G K K
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L M + G+ ISY +I+GLC+ ++E +L +M + + D VT++ LI G+ +
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G + A + +M + L + I Y++LI++ CK N+ A+ M G + T
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
LV F + G + EA + M+ G PS ++ +IN + +G
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 113/230 (49%), Gaps = 1/230 (0%)
Query: 24 LLPNCITYNTLIDGHC-SKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+P ++YN ++D SK NI A + EM+ + PN TY L+ G +
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVA 224
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ ++M G ++Y +IDG CK R +++ LL M + P++++++V+ING
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
R G++ ++ +M + L+ + Y+TLI YCK N +AL +A M G
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 344
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
T L+ + C++G + A F+D M GL P+ + +++ + G
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 98/192 (51%), Gaps = 4/192 (2%)
Query: 73 LSKHSKFGLVSSTLERMRM---NGVRVGHISYTAMIDGLCKN-RLLEEAVHLLDDMLKAS 128
+ +S+ L+ L + + +G G +SY A++D ++ R + A ++ +ML++
Sbjct: 141 VKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ 200
Query: 129 INPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEAL 188
++P+V T+++LI GF AG I+ A + KM + N + Y+TLI YCK+R + +
Sbjct: 201 VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGF 260
Query: 189 NTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
M G + + NV++ CR GR+KE + + M+R G ++ +I Y
Sbjct: 261 KLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGY 320
Query: 249 GNSGDALKAFFL 260
G+ +A +
Sbjct: 321 CKEGNFHQALVM 332
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 15/228 (6%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ TY LI+ +C +G++E+A +L +EMV G+ P+ VTY L+NGL+K S+
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 84 STLERMRMNGVRVGHISY---------------TAMIDGLCKNRLLEEAVHLLDDMLKAS 128
L ++ ++Y ++I G C ++ EA + + ML +
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 129 INPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEAL 188
PD ++++I+G RAG I A + +M K+ +L+ + L+ K + E
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELN 695
Query: 189 NTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDP 236
+ + S +S+ VLV R G + + M++ G P
Sbjct: 696 SVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLP 743
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ PN +TYN +ID C G +A +LL M+ + P+ VT+ AL+N K K
Sbjct: 41 IFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAE 100
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ M + I+Y +MIDG CK +++A +LD M +PDVVTFS LING+
Sbjct: 101 EIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGY 160
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+A +++N EI C+M++ +V N + Y+TLI+ +C++ +L A + M G D+
Sbjct: 161 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDY 220
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSR 231
T + ++A C L++A ++ + +
Sbjct: 221 ITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 112/232 (48%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ + ++D C GN A L EM G+ PN +TY +++ ++ L
Sbjct: 9 DVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLL 68
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
M + ++++A+I+ K R + EA + +ML+ SI P +T++ +I+GF +
Sbjct: 69 RHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQ 128
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
++++AK ++ M + + +STLI YCK + + + + M+ G V++ T
Sbjct: 129 DRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 188
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
L+ FC+ G L A+ ++ M G+ P F C++ + + KAF
Sbjct: 189 TTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%)
Query: 59 LKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAV 118
+K + V A+++ L K + M G+ ++Y MID C + +A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 119 HLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNY 178
LL M++ INPD+VTFS LIN F++ K++ A+EI +M + + I Y+++I +
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 179 CKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPST 238
CK + +A M G D T + L+ +C++ R+ M R G+ +T
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 239 SAFDCIINSYGNSGD 253
+ +I+ + GD
Sbjct: 186 VTYTTLIHGFCQVGD 200
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 75/141 (53%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
+++ P ITYN++IDG C + +++A R+LD M S G P+ VT+ L+NG K +
Sbjct: 109 WSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDN 168
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
M G+ ++YT +I G C+ L+ A LL++M+ + PD +TF ++
Sbjct: 169 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLA 228
Query: 142 GFLRAGKINNAKEIMCKMYKT 162
G ++ A I+ + K+
Sbjct: 229 GLCSKKELRKAFAILEDLQKS 249
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%)
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
M + ++ + TA++D LCK+ A +L +M + I P+V+T++ +I+ F +G+
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
++A +++ M + + + + +S LI + K R + EA Y M T N
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
++ FC+ R+ +A+ +D M+ G P F +IN Y
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGY 160
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 116/223 (52%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T +TLI+G C KG + EA L+D MV +G +P+EVTYG +LN L K L
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+M ++ + Y+ +ID LCK+ ++A+ L ++M I DVVT+S LI G
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK ++ +++ +M ++ + + +S LI + K L EA Y M G D T
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
N L+ FC+ L EA D M G +P + +INSY
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 117/230 (50%), Gaps = 1/230 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ P+ ITYN+LIDG C + + EA ++ D MVS G +P+ VTY L+N K +
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ G+ I+Y ++ G C++ L A L +M+ + P VVT+ +L++G
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
G++N A EI KM K+ + L +Y+ +I+ C + +A + + ++ G D
Sbjct: 466 CDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDV 525
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY-GNSG 252
T NV++ C+ G L EA+ M G P ++ +I ++ G SG
Sbjct: 526 VTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 114/234 (48%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +TY++LI G C+ G ++ ++L EM+ + P+ VT+ AL++ K K
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
M G+ I+Y ++IDG CK L EA + D M+ PD+VT+S+LIN + +A
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
++++ + ++ L+ N I Y+TL+ +C+ L A + M G T
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+L+ C +G L +A + M + + ++ II+ N+ A+ L
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 512
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY+ LI+ +C +++ RL E+ S GL PN +TY L+ G + K
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M GV ++Y ++DGLC N L +A+ + + M K+ + + ++++I+G
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A K+++A + C + + + + Y+ +I CK +L EA + M G D FT
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 562
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
N+L+ L + ++ M G +S +I+
Sbjct: 563 YNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S L+PN ITYNTL+ G C G + A L EMVS G+ P+ VTYG LL+GL + +
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
E+M+ + + +G Y +I G+C +++A L + + PDVVT++V+I
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G + G ++ A + KM + ++ Y+ LI + L ++ M G
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFS 592
Query: 201 SDHFTCNVLV 210
+D T +++
Sbjct: 593 ADSSTIKMVI 602
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
T +I+ +C K + AF +L G +P+ +T+ L+NG + + ++RM
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
R ++ + +I+GLC + EA+ L+D M++ PD VT+ ++N ++G
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A ++ KM + + + + YS +I + CK + +AL+ + M G +D T + L
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ C G+ + + M + P F +I+ + G L+A
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 3/219 (1%)
Query: 43 NIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYT 102
+ +A L + M+ P + + L + +++ ++ LV + M +NG+ + T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 103 AMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKT 162
MI+ C+ + L A +L K PD +TFS L+NGF G+++ A ++ +M +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 163 VLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEA 222
+ + STLI C + EAL M G D T ++ C+SG A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 223 EYFMDHMSRMGLDPSTSAFDCIINSYGNSG---DALKAF 258
M + S + +I+S G DAL F
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 268
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 95/228 (41%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
LP I +N L + M +G++ + T ++N + K S
Sbjct: 67 LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFS 126
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L R G I+++ +++G C + EAV L+D M++ PD+VT S LING
Sbjct: 127 VLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 186
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
G+++ A ++ +M + + + Y ++ CK N AL+ + M +
Sbjct: 187 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 246
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
++++ + C+ G +A + M G+ + +I N G
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 294
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 119/236 (50%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+LP+ +TYN+LIDG C GN + A+RLL M GL P++ TY ++++ L K +
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEA 516
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ + GV + YTA+IDG CK ++EA +L+ ML + P+ +TF+ LI+G
Sbjct: 517 CDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG 576
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
GK+ A + KM K L + LI+ K + A + + M SG D
Sbjct: 577 LCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPD 636
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
T + T+CR GRL +AE M M G+ P + +I YG+ G AF
Sbjct: 637 AHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 121/235 (51%), Gaps = 1/235 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN TY LID CS+ E+A LL +M+ GL PN +TY AL+NG K
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+E M + +Y +I G CK+ + +A+ +L+ ML+ + PDVVT++ LI+G R
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+G ++A ++ M LV + Y+++I + CK + ++EA + + + G +
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
L+ +C++G++ EA ++ M P++ F+ +I+ G +A L
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 589
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 112/226 (49%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN TYN +++G+C GN+EEA + + ++V GL P+ TY +L+ G +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M + G R ++YT +I GLC R ++EA+ L M P V T++VLI
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+ + + A ++ +M +T + N Y+ LI + C ++A M G + + T
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS 251
N L+ +C+ G +++A ++ M L P+T ++ +I Y S
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS 441
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 114/247 (46%), Gaps = 23/247 (9%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S N LPN +T+N LI G C+ G ++EA L ++MV GL+P T L++ L K F
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
S ++M +G + +YT I C+ L +A ++ M + ++PD+ T+S LI
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYN---------------YCKMRNLK 185
G+ G+ N A +++ +M T + + +LI + C M N+
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM 739
Query: 186 EALNTYAVMNHSGHVSDHFTCNV-----LVATFCRSGRLKEAEYFMDHMSR-MGLDPSTS 239
E ++ V T N L+ C G L+ AE DHM R G+ PS
Sbjct: 740 EFDTVVELLEK--MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSEL 797
Query: 240 AFDCIIN 246
F+ +++
Sbjct: 798 VFNALLS 804
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 2/209 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN + Y LIDG+C G ++EA +L++M+S PN +T+ AL++GL K +
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 589
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E+M G++ + T +I L K+ + A ML + PD T++ I + R
Sbjct: 590 EEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR 649
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G++ +A+++M KM + + + YS+LI Y + A + M +G T
Sbjct: 650 EGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT 709
Query: 206 CNVLVATFC--RSGRLKEAEYFMDHMSRM 232
L+ + G+ K +E + MS M
Sbjct: 710 FLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 2/231 (0%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
+ L+ C YNTL++ G ++E ++ EM+ + PN TY ++NG K
Sbjct: 179 YKLIIGC--YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEE 236
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
+ + ++ G+ +YT++I G C+ + L+ A + ++M + V ++ LI+
Sbjct: 237 ANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIH 296
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
G A +I+ A ++ KM Y+ LI + C EALN M +G
Sbjct: 297 GLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 356
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+ T VL+ + C + ++A + M GL P+ ++ +IN Y G
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 110/253 (43%), Gaps = 20/253 (7%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TY T I +C +G + +A ++ +M +G+ P+ TY +L+ G +
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRL------------------LEEAVHLLDDMLKA 127
L+RMR G ++ ++I L + + + V LL+ M++
Sbjct: 695 LKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEH 754
Query: 128 SINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTV-LVLNNILYSTLIYNYCKMRNLKE 186
S+ P+ ++ LI G G + A+++ M + + + ++++ L+ CK++ E
Sbjct: 755 SVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNE 814
Query: 187 ALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
A M GH+ +C VL+ + G + ++ + G A+ II+
Sbjct: 815 AAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIID 874
Query: 247 SYGNSGDALKAFF 259
G G ++AF+
Sbjct: 875 GVGKQG-LVEAFY 886
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 101 YTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMY 160
Y +++ L + L++E + +ML+ + P++ T++ ++NG+ + G + A + + K+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 161 KTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLK 220
+ L + Y++LI YC+ ++L A + M G + L+ C + R+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 221 EAEYFMDHMSRMGLD---PSTSAFDCIINSYGNSGDALKAFFLCLIK 264
EA MD +M D P+ + +I S G K+ L L+K
Sbjct: 306 EA---MDLFVKMKDDECFPTVRTYTVLIKSL--CGSERKSEALNLVK 347
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 125/231 (54%), Gaps = 3/231 (1%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
Y +LI +C KGN++ AF L DE+ GL P+ TYGAL++G+ K + G + M+
Sbjct: 332 YTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQ 391
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
GV + + + +IDG C+ +++EA + D M + DV T + + + F R + +
Sbjct: 392 SKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLV 210
AK+ + +M + + L+ + Y+ LI YCK N++EA + M+ G + T NV++
Sbjct: 452 EAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMI 511
Query: 211 ATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS---YGNSGDALKAF 258
+C+ G++KEA +M G+DP + + +I+ N +A++ F
Sbjct: 512 YAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLF 562
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 111/219 (50%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
+ +NTLIDG+C KG ++EA + D M G + + T + + ++ ++ L R
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR 459
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
M GV++ +SYT +ID CK +EEA L +M + P+ +T++V+I + + GK
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
I A+++ M + ++ Y++LI+ C N+ EA+ ++ M G + T V
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
+++ ++G+ EA D M R G + +I S
Sbjct: 580 MISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 122/259 (47%), Gaps = 35/259 (13%)
Query: 34 LIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNG 93
+++G C +G +E++ +L+ E G+KP TY ++N K F V L+ M+ +G
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 94 VRVGHISYTAMIDGLCKN---------------RLLEEAVH------------------- 119
V ++YT +++ KN R +E VH
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 120 -LLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNY 178
L D++ + ++P T+ LI+G + G++ A+ +M +M + + ++++TLI Y
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGY 409
Query: 179 CKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPST 238
C+ + EA Y VM G +D FTCN + + F R R EA+ ++ M G+ ST
Sbjct: 410 CRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLST 469
Query: 239 SAFDCIINSYGNSGDALKA 257
++ +I+ Y G+ +A
Sbjct: 470 VSYTNLIDVYCKEGNVEEA 488
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%)
Query: 38 HCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVG 97
+ G EE R+ D MV GL +E + L K + L RM +GV++
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223
Query: 98 HISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMC 157
S T +++GLC+ +E++ L+ + I P+ T++ +IN +++ + + ++
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK 283
Query: 158 KMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSG 217
M K +V N + Y+ L+ K + +A + M G SD L++ CR G
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343
Query: 218 RLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
+K A D ++ GL PS+ + +I+ G+
Sbjct: 344 NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TY +LI G C N++EA RL EM GL N VTY +++GLSK K
Sbjct: 537 PDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGL 596
Query: 86 LERMRMNGVRVGHISYTAMIDGL 108
+ M+ G + + YTA+I +
Sbjct: 597 YDEMKRKGYTIDNKVYTALIGSM 619
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 117/223 (52%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P IT N L++G C G + +A L+D MV G +PNEVTYG +L + K + L
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L +M +++ + Y+ +IDGLCK+ L+ A +L ++M D++ ++ LI GF
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AG+ ++ +++ M K + + + +S LI + K L+EA + M G D T
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
L+ FC+ +L +A + +D M G P+ F+ +IN Y
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 123/235 (52%), Gaps = 6/235 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY +LIDG C + +++A +LD MVS G PN T+ L+NG + K L+
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING---YCKANLIDDG 406
Query: 86 LE---RMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
LE +M + GV ++Y +I G C+ LE A L +M+ + PD+V++ +L++G
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
G+ A EI K+ K+ + L+ +Y+ +I+ C + +A + + + G D
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
T N+++ C+ G L EA+ M G P+ ++ +I ++ GDA K+
Sbjct: 527 VKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 118/234 (50%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ I Y TLI G C G ++ +LL +M+ + P+ V + AL++ K K
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+ M G+ ++YT++IDG CK L++A H+LD M+ P++ TF++LING+ +A
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
I++ E+ KM +V + + Y+TLI +C++ L+ A + M D +
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+L+ C +G ++A + + + ++ ++ II+ N+ A+ L
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 115/232 (49%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ + Y+ +IDG C G+++ AF L +EM G K + + Y L+ G ++ + L
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
M + ++++A+ID K L EA L +M++ I+PD VT++ LI+GF +
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
+++ A ++ M N ++ LI YCK + + L + M+ G V+D T
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
N L+ FC G+L+ A+ M + P ++ +++ ++G+ KA
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 112/231 (48%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N T + +I+ C + AF + +++ G +P+ VT+ L+NGL + +
Sbjct: 106 NLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV 165
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+RM G + I+ A+++GLC N + +AV L+D M++ P+ VT+ ++ ++
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G+ A E++ KM + + L+ + YS +I CK +L A N + M G +D
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
L+ FC +GR + + M + + P AF +I+ + G +A
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 111/235 (47%), Gaps = 2/235 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN T+N LI+G+C I++ L +M G+ + VTY L+ G + K +
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M VR +SY ++DGLC N E+A+ + + + K+ + D+ ++++I+G
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A K+++A ++ C + + + Y+ +I CK +L EA + M GH + T
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
N+L+ G ++ ++ + R G S +++ + LK FL
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG--RLKKSFL 617
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%)
Query: 45 EEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAM 104
++A L EM +P + + L + +++ ++ LV ++M + G+ + + M
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 105 IDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVL 164
I+ C+ R L A + ++K PD VTFS LING G+++ A E++ +M +
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 165 VLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEY 224
I + L+ C + +A+ M +G + T ++ C+SG+ A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 225 FMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+ M + + II+ G AF L
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNL 269
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 122/235 (51%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
LLP+ ITYNTLIDG+C GN E++F++ + M + ++P+ +T+ LL GL K
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ L+ M+ G +++ + DG N E A+ + + + + + + T S+L+N
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ GKI A+EI+ + LV N ++Y+T+I YC+ +L A M G DH
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
N L+ FC G ++ AE ++ M G+ PS ++ +I YG + K F
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 4/235 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TYN LI G+ K ++ F +L EM +G PN V+YG L+N L K SK
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 516
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M GV Y +IDG C +E+A +MLK I ++VT++ LI+G
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK++ A++++ ++ + L + Y++LI Y N++ + Y M SG T
Sbjct: 577 TGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKT 636
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
++L+ + C ++ E MS L P ++ +++ Y GD KAF L
Sbjct: 637 YHLLI-SLCTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNL 687
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 112/237 (47%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+PN + YNT+IDG+C KG++ A ++ M G+KP+ + Y L+ + +
Sbjct: 385 LVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAE 444
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ +M++ GV +Y +I G + ++ +L +M P+VV++ LIN
Sbjct: 445 KEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCL 504
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ K+ A+ + M + +Y+ LI C +++A M G +
Sbjct: 505 CKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNL 564
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
T N L+ +G+L EAE + +SR GL P ++ +I+ YG +G+ + L
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIAL 621
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ + YN LI C G +E A + +++M G+ P+ TY L+ G + +F
Sbjct: 422 PDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDI 481
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L+ M NG +SY +I+ LCK L EA + DM ++P V +++LI+G
Sbjct: 482 LKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCS 541
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GKI +A +M K + LN + Y+TLI L EA + ++ G D FT
Sbjct: 542 KGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFT 601
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
N L++ + +G ++ + M R G+ P+ + +I+
Sbjct: 602 YNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 104/232 (44%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ Y I ++ + L + M + P+ Y L++GL K +
Sbjct: 177 PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQL 236
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M + I+Y +IDG CK E++ + + M I P ++TF+ L+ G +
Sbjct: 237 FDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFK 296
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AG + +A+ ++ +M V + +S L Y + AL Y SG + +T
Sbjct: 297 AGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYT 356
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
C++L+ C+ G++++AE + GL P+ ++ +I+ Y GD + A
Sbjct: 357 CSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 4/233 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P YN LIDG CSKG IE+AFR EM+ G++ N VTY L++GLS K
Sbjct: 527 PKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDL 586
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L + G++ +Y ++I G ++ + L ++M ++ I P + T+ +LI+ +
Sbjct: 587 LLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTK 646
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G I + + +M L + ++Y+ +++ Y ++++A N M D T
Sbjct: 647 EG-IELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTT 702
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
N L+ + G+L E +D M+ ++P ++ I+ + D + A+
Sbjct: 703 YNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAY 755
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ IT+NTL+ G G +E+A +L EM G P+ T+ L +G S + K
Sbjct: 282 PSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGV 341
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E +GV++ + + +++ LCK +E+A +L + + P+ V ++ +I+G+ R
Sbjct: 342 YETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCR 401
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G + A+ + M K + +++ Y+ LI +C++ ++ A M G T
Sbjct: 402 KGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVET 461
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
N+L+ + R + + M G P+ ++ +IN
Sbjct: 462 YNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 16/212 (7%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHS------ 77
L P+ TYN+LI G+ GN++ L +EM G+KP TY L++ +K
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTER 654
Query: 78 KFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFS 137
FG +S + + NGV + + M E+A +L M++ SI D T++
Sbjct: 655 LFGEMSLKPDLLVYNGVLHCYAVHGDM----------EKAFNLQKQMIEKSIGLDKTTYN 704
Query: 138 VLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHS 197
LI G L+ GK+ + ++ +M + Y+ ++ +C++++ A Y M
Sbjct: 705 SLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEK 764
Query: 198 GHVSDHFTCNVLVATFCRSGRLKEAEYFMDHM 229
G + D N LV+ R KEAE + M
Sbjct: 765 GFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%)
Query: 44 IEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTA 103
I EA L + + G+ P+ + LL+ L K +F + + + + R Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 104 MIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTV 163
I K + + + L + M I P V ++VLI+G + ++N+A+++ +M
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 164 LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAE 223
L+ + I Y+TLI YCK N +++ M T N L+ ++G +++AE
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 224 YFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
+ M +G P F + + Y ++ A A
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 67/151 (44%)
Query: 108 LCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLN 167
L +++++ EA L + I P + ++L++ ++ + + + ++ +
Sbjct: 119 LNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 178
Query: 168 NILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMD 227
+Y I K+ ++ + L + M H F NVL+ C+ R+ +AE D
Sbjct: 179 KFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFD 238
Query: 228 HMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
M L PS ++ +I+ Y +G+ K+F
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCKAGNPEKSF 269
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 122/233 (52%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN + YNT+ID C KG + A +L M G++P+ VTY +L+ L +G+ +
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L M G+ I+++A+ID K L EA ++M++ S+NP++VT++ LING
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G ++ AK+++ + N + Y+TLI YCK + + + + VM+ G D FT
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFT 361
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
N L +C++G+ AE + M G+ P F+ +++ + G KA
Sbjct: 362 YNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL 414
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TYN+LI+G C G ++EA ++L+ +VS G PN VTY L+NG K +
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L M +GV +Y + G C+ A +L M+ ++PD+ TF++L++G
Sbjct: 347 LCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCD 406
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GKI A + + K+ V+ I Y+ +I CK +++A + + G D T
Sbjct: 407 HGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVIT 466
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRM-GLDP 236
++ R +EA M + GL P
Sbjct: 467 YITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 109/216 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ IT++ LID + +G + EA + +EM+ + PN VTY +L+NGL H
Sbjct: 252 PDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKV 311
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L + G ++Y +I+G CK + +++ + +L M + ++ D T++ L G+ +
Sbjct: 312 LNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQ 371
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AGK + A++++ +M + + ++ L+ C + +AL + S V T
Sbjct: 372 AGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIIT 431
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAF 241
N+++ C++ ++++A Y ++ G+ P +
Sbjct: 432 YNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 104/219 (47%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
++ TLID C + A L +M+ G +P+ VT+G+L+NG ++F S ++++
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
G + Y +ID LC+ + A+ +L M K I PDVVT++ LI +G
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
+ I+ M + + + I +S LI Y K L EA Y M + T N L
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
+ C G L EA+ ++ + G P+ ++ +IN Y
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGY 334
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%)
Query: 46 EAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMI 105
+A L +M P+ V + LL ++K +K+ V S + M G+ S+T +I
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 106 DGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLV 165
D C+ L A+ L M+K P +VTF L+NGF + A ++ ++
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 166 LNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYF 225
N ++Y+T+I + C+ + AL+ M G D T N L+ SG +
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 226 MDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ M RMG+ P F +I+ YG G L+A
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S PN +TYNTLI+G+C +++ ++L M G+ + TY L G + KF
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
L RM GV ++ ++DGLC + + +A+ L+D+ K+ ++T++++I
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIII 436
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMN 195
G +A K+ +A + C + + + I Y T++ + R +EA Y M
Sbjct: 437 KGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 101/222 (45%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
LP+ + ++ L+ E L + G+ + ++ L++ + ++ L S
Sbjct: 76 LPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALS 135
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L +M G +++ ++++G C EA+ L+D ++ P+VV ++ +I+
Sbjct: 136 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 195
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
G++N A +++ M K + + + Y++LI + + M G D
Sbjct: 196 EKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVI 255
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
T + L+ + + G+L EA+ + M + ++P+ ++ +IN
Sbjct: 256 TFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 125/237 (52%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ P+ YN+LI G ++EA L EMV +GLKPN TYGA ++G + S+F
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
++ MR GV + T +I+ CK + EA M+ I D T++VL+NG
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ K+++A+EI +M + + Y LI + K+ N+++A + + M G +
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
N+L+ FCRSG +++A+ +D MS GL P+ + II+ Y SGD +AF L
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 125/235 (53%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N++ + TY T++ G CS G+++ A+ ++ EM++ G +PN V Y L+ ++S+FG
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
L+ M+ G+ Y ++I GL K + ++EA L +M++ + P+ T+ I+G
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
++ A + +A + + +M + ++ N +L + LI YCK + EA + Y M G + D
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGD 591
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
T VL+ ++ ++ +AE M G+ P ++ +IN + G+ KA
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 113/223 (50%), Gaps = 1/223 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+LPN + LI+ +C KG + EA MV G+ + TY L+NGL K+ K
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
MR G+ SY +I+G K +++A + D+M++ + P+V+ +++L+ GF
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
R+G+I AKE++ +M L N + Y T+I YCK +L EA + M G V D
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
F LV CR ++ A ++ G ST+ F+ +IN
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALIN 774
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 5/241 (2%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L PN I YN L+ G C G IE+A LLDEM GL PN VTY +++G K
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ M++ G+ YT ++DG C+ +E A+ + K + F+ LIN
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCAS-STAPFNALINWV 776
Query: 144 LRAGKINNAKEIMCKM----YKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
+ GK E++ ++ + N++ Y+ +I CK NL+ A + M ++
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFF 259
+ T L+ + + GR E D G++P + IIN++ G KA
Sbjct: 837 MPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALV 896
Query: 260 L 260
L
Sbjct: 897 L 897
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 102/222 (45%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+P TY+ LIDG C +E+A LL EM S G+ + TY L++GL K
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ M +G+ + Y I + K ++E+A L D M+ + + P ++ LI G+
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
R + E++ +M K +V++ Y T++ C +L A N M SG +
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
L+ TF ++ R +A + M G+ P ++ +I
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI 494
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TY+ LIDG N + A L+ EMVSHG+ Y + +SK + + M
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+G+ +Y ++I+G C+ + + + LL +M K +I T+ ++ G +G +
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
+ A I+ +M + N ++Y+TLI + + +A+ M G D F N L
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
+ ++ R+ EA F+ M GL P+ + I+ Y
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 114/260 (43%), Gaps = 24/260 (9%)
Query: 23 NLLPNCITYNTLIDGHCSKGNI----------EEAFR-----------LLDEMVSHGLKP 61
N++ + TY+ LI HC GN+ E+ FR L + M+ GL P
Sbjct: 216 NVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVP 275
Query: 62 NEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLL 121
+ TY L++GL K + S L M GV + + +Y+ +IDGL K R + A L+
Sbjct: 276 LKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLV 335
Query: 122 DDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKM 181
+M+ IN + I + G + AK + M + L+ Y++LI YC+
Sbjct: 336 HEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCRE 395
Query: 182 RNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAF 241
+N+++ M V +T +V C SG L A + M G P+ +
Sbjct: 396 KNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIY 455
Query: 242 DCIINSY-GNS--GDALKAF 258
+I ++ NS GDA++
Sbjct: 456 TTLIKTFLQNSRFGDAMRVL 475
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 102/217 (47%)
Query: 41 KGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHIS 100
+G +E+A L D M++ GL P Y +L+ G + L M+ + + +
Sbjct: 360 EGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT 419
Query: 101 YTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMY 160
Y ++ G+C + L+ A +++ +M+ + P+VV ++ LI FL+ + +A ++ +M
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 161 KTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLK 220
+ + + Y++LI K + + EA + M +G + FT ++ + +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 221 EAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
A+ ++ M G+ P+ +IN Y G ++A
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TYN +ID C +GN+E A L +M + L P +TY +LLNG K + +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPD-----VVTFSVLI 140
+ G+ HI Y+ +I+ K + +A+ L+D M + D + T L+
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLK 185
+GF + G++ A+++M M + + ++ LI C N +
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 103/262 (39%), Gaps = 68/262 (25%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAF----------------------------------- 48
L+P+ Y TL+DG C ++E A
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTE 787
Query: 49 ---RLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMI 105
RL+D KPN+VTY +++ L K +M+ + I+YT+++
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847
Query: 106 DGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLV 165
+G K E + D+ + A I PD + +SV+IN FL+ G K +++
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT----------KALVL 897
Query: 166 LNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYF 225
++ + + + CK+ +S TC L++ F + G ++ AE
Sbjct: 898 VDQMFAKNAVDDGCKL-----------------SIS---TCRALLSGFAKVGEMEVAEKV 937
Query: 226 MDHMSRMGLDPSTSAFDCIINS 247
M++M R+ P ++ +IN
Sbjct: 938 MENMVRLQYIPDSATVIELINE 959
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
NL+P ITY +L++G+ G E F + DE ++ G++P+ + Y ++N K
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Query: 83 SSTLERMRM-----NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFS 137
+++M +G ++ + A++ G K +E A ++++M++ PD T
Sbjct: 895 LVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954
Query: 138 VLIN 141
LIN
Sbjct: 955 ELIN 958
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 133/275 (48%), Gaps = 45/275 (16%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSK----HSKFGL 81
PN I + +LIDG C KG+I++AF +L+EMV +G KPN T+ AL++GL K F L
Sbjct: 285 PNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRL 344
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
L+ +R + + +YT+MI G CK L A L M + + P+V T++ LIN
Sbjct: 345 F---LKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 401
Query: 142 GFLRAGKINNAKEIM----------------------CKMYKTV-------------LVL 166
G +AG A E+M CK + L
Sbjct: 402 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 461
Query: 167 NNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFM 226
+ + Y+ LI CK ++ +AL + MN +G +D N+L+A FCR ++KE+E
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 521
Query: 227 DHMSRMGLDPSTSAFDCIINSYGNSGD---ALKAF 258
+ +GL P+ + +I+ Y GD ALK F
Sbjct: 522 QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYF 556
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN TY ++I G+C + + A L M GL PN TY L+NG K FG
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M G +Y A ID LCK EA LL+ + D VT+++LI +
Sbjct: 416 MNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCK 475
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
IN A C+M KT + L + LI +C+ + +KE+ + ++ G + T
Sbjct: 476 QNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKET 535
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
+++ +C+ G + A + +M R G P + + +I+
Sbjct: 536 YTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLIS 576
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 104/237 (43%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L PN TY TLI+GHC G+ A+ L++ M G PN TY A ++ L K S+
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 448
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L + G+ ++YT +I CK + +A+ M K D+ ++LI F
Sbjct: 449 ELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 508
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
R K+ ++ + + L+ Y+++I YCK ++ AL + M G V D
Sbjct: 509 CRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDS 568
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
FT L++ C+ + EA + M GL P + Y D+ A L
Sbjct: 569 FTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMIL 625
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 116/241 (48%), Gaps = 7/241 (2%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
++P+ +Y ++ G G I+EA R L M+ G P+ T +L L ++ GLV+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCEN---GLVN 269
Query: 84 STLERMRMN---GVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ R G + I++T++IDGLCK +++A +L++M++ P+V T + LI
Sbjct: 270 RAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALI 329
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNI-LYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
+G + G A + K+ ++ N+ Y+++I YCK L A ++ M G
Sbjct: 330 DGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 389
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFF 259
+ T L+ C++G A M+ M G P+ ++ I+S A +A+
Sbjct: 390 FPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYE 449
Query: 260 L 260
L
Sbjct: 450 L 450
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 9/242 (3%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ IT N +++ G IE A + DEM G+ P+ +Y ++ G + K
Sbjct: 178 LTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEAD 237
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L M G + + T ++ LC+N L+ A+ M+ P+++ F+ LI+G
Sbjct: 238 RWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGL 297
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G I A E++ +M + N ++ LI CK ++A + + SD
Sbjct: 298 CKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVR----SDT 353
Query: 204 FTCNV-----LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
+ NV ++ +C+ +L AE M GL P+ + + +IN + +G +A+
Sbjct: 354 YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAY 413
Query: 259 FL 260
L
Sbjct: 414 EL 415
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 2/178 (1%)
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
M+ G+ I+ +++ + L+E A ++ D+M + PD ++ +++ G R GK
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
I A + M + + +N + ++ C+ + A+ + M G +
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 292
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF--FLCLIK 264
L+ C+ G +K+A ++ M R G P+ +I+ G KAF FL L++
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVR 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S L+P TY ++I +C +G+I+ A + M HG P+ TYG+L++GL K S
Sbjct: 526 SLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVD 585
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLK 126
E M G+ ++ + CK A+ LL+ + K
Sbjct: 586 EACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDK 631
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 118/237 (49%), Gaps = 2/237 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ T LIDGHC GN++ A L +M ++ + VTY LL+G K
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
M + ISY+ +++ LC L EA + D+M+ +I P V+ + +I G+
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGY 595
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMN--HSGHVS 201
R+G ++ + + KM V + I Y+TLIY + + N+ +A M G V
Sbjct: 596 CRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVP 655
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
D FT N ++ FCR ++KEAE + M G++P S + C+IN + + + +AF
Sbjct: 656 DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAF 712
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 112/237 (47%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+P+ + Y LI G+C KG I A L +EM+ G + VTY +L+GL K G
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
M + + T +IDG CK L+ A+ L M + I DVVT++ L++GF
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G I+ AKEI M ++ I YS L+ C +L EA + M
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
CN ++ +CRSG + E F++ M G P +++ +I + + KAF L
Sbjct: 586 MICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGL 642
Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 117/236 (49%), Gaps = 3/236 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TYNTLI + SKG +EEAF L++ M G P TY ++NGL KH K+
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M +G+ +Y +++ CK + E + DM + PD+V FS +++ F R
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+G ++ A + + L+ +N++Y+ LI YC+ + A+N M G D T
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY---GNSGDALKAF 258
N ++ C+ L EA+ + M+ L P + +I+ + GN +A++ F
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 117/234 (50%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S +++P+ + +++++ GN+++A + + GL P+ V Y L+ G +
Sbjct: 368 SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ + M G + ++Y ++ GLCK ++L EA L ++M + ++ PD T ++LI
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI 487
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+G + G + NA E+ KM + + L+ + Y+TL+ + K+ ++ A +A M +
Sbjct: 488 DGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDA 254
+ ++LV C G L EA D M + P+ + +I Y SG+A
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNA 601
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P TYNT+I+G C G E A + EM+ GL P+ TY +LL K
Sbjct: 303 PGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKV 362
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
MR V + +++M+ ++ L++A+ + + +A + PD V +++LI G+ R
Sbjct: 363 FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G I+ A + +M + ++ + Y+T+++ CK + L EA + M D +T
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
+L+ C+ G L+ A M + ++ +++ +G GD
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%)
Query: 32 NTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRM 91
N LI G +E A+ + E+ G+ N T ++N L K K V + L +++
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 92 NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINN 151
GV ++Y +I L+EEA L++ M +P V T++ +ING + GK
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 152 AKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVA 211
AKE+ +M ++ L ++ Y +L+ CK ++ E ++ M V D + +++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 212 TFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
F RSG L +A + + + GL P + +I Y G
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 424
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 93/184 (50%), Gaps = 2/184 (1%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S +LP I+Y+ L++ CSKG++ EAFR+ DEM+S +KP + +++ G +
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 602
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDM--LKASINPDVVTFSV 138
S LE+M G ISY +I G + + +A L+ M + + PDV T++
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 139 LINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
+++GF R ++ A+ ++ KM + + + Y+ +I + NL EA + M G
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Query: 199 HVSD 202
D
Sbjct: 723 FSPD 726
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 115/235 (48%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ TY +L+ C KG++ E ++ +M S + P+ V + ++++ ++
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
++ G+ ++ YT +I G C+ ++ A++L ++ML+ DVVT++ +++G
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ + A ++ +M + L ++ + LI +CK+ NL+ A+ + M D
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
T N L+ F + G + A+ M + P+ ++ ++N+ + G +AF
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAF 570
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 94/228 (41%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
++ LI + + EA + S G + AL+ L + L + +
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
+GV + + M++ LCK+ +E+ L + + + PD+VT++ LI+ + G +
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLV 210
A E+M M Y+T+I CK + A +A M SG D T L+
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 211 ATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
C+ G + E E M + P F +++ + SG+ KA
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 83/196 (42%)
Query: 62 NEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLL 121
N+ + L+ + K +R G V + A+I L + +E A +
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 122 DDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKM 181
++ ++ + +V T ++++N + GK+ + ++ + + + + Y+TLI Y
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 182 RNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAF 241
++EA M G +T N ++ C+ G+ + A+ M R GL P ++ +
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 242 DCIINSYGNSGDALKA 257
++ GD ++
Sbjct: 344 RSLLMEACKKGDVVET 359
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 49 RLLDEMVSH--GLKPNEVTYGALLNGLSKHSKFGLVSSTLERM-RMNGVRVGHISYTAMI 105
R +D++ H K ++ A+++ L + + S L RM R +GV
Sbjct: 97 RFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGV----------- 145
Query: 106 DGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLV 165
+RL E V+ LD + D V F +LI +++A K+ A E +
Sbjct: 146 -----SRL--EIVNSLDSTFSNCGSNDSV-FDLLIRTYVQARKLREAHEAFTLLRSKGFT 197
Query: 166 LNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYF 225
++ + LI + ++ ++ A Y ++ SG + +T N++V C+ G++++ F
Sbjct: 198 VSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTF 257
Query: 226 MDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+ + G+ P ++ +I++Y + G +AF L
Sbjct: 258 LSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFEL 292
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 124/225 (55%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+LP+ + Y TLIDG C +G+I A + EM S + P+ +TY A+++G +
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
M G+ +++T +I+G CK +++A + + M++A +P+VVT++ LI+G
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G +++A E++ +M+K L N Y++++ CK N++EA+ +G +D
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
T L+ +C+SG + +A+ + M GL P+ F+ ++N +
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 117/232 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY TLIDG C +G+++ A LL EM GL+PN TY +++NGL K
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ G+ ++YT ++D CK+ +++A +L +ML + P +VTF+VL+NGF
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G + + ++++ M + N +++L+ YC NLK A Y M G D T
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
LV C++ +KEA + M G S S + +I + L+A
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 685
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 121/232 (52%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ I+Y+T+++G+C G +++ ++L++ M GLKPN YG+++ L + K
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M G+ + YT +IDG CK + A +M I PDV+T++ +I+GF +
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G + A ++ +M+ L +++ ++ LI YCK ++K+A + M +G + T
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
L+ C+ G L A + M ++GL P+ ++ I+N SG+ +A
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 116/228 (50%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S ++ P+ +TY +I G C G++ EA +L EM GL+P+ VT+ L+NG K
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
M G ++YT +IDGLCK L+ A LL +M K + P++ T++ ++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
NG ++G I A +++ + L + + Y+TL+ YCK + +A M G
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
T NVL+ FC G L++ E ++ M G+ P+ + F+ ++ Y
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 125/237 (52%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ +T+ LI+G+C G++++AFR+ + M+ G PN VTY L++GL K +
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L M G++ +Y ++++GLCK+ +EEAV L+ + A +N D VT++ L++ +
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
++G+++ A+EI+ +M L + ++ L+ +C L++ M G +
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
T N LV +C LK A M G+ P ++ ++ + + + +A+FL
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 105/219 (47%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L PN TYN++++G C GNIEEA +L+ E + GL + VTY L++ K +
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L+ M G++ +++ +++G C + +LE+ LL+ ML I P+ TF+ L+ +
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ A I M + + Y L+ +CK RN+KEA + M G
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFD 242
T +VL+ F + + EA D M R GL FD
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 109/234 (46%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L PN Y ++I C + EA EM+ G+ P+ V Y L++G K S
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
M + ++YTA+I G C+ + EA L +M + PD VTF+ LING+
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+AG + +A + M + N + Y+TLI CK +L A M G +
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
FT N +V C+SG ++EA + GL+ T + ++++Y SG+ KA
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 112/227 (49%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N +YN +I C G I+EA LL M G P+ ++Y ++NG + + V +
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
E M+ G++ Y ++I LC+ L EA +M++ I PD V ++ LI+GF +
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G I A + +M+ + + + Y+ +I +C++ ++ EA + M G D T
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
L+ +C++G +K+A +HM + G P+ + +I+ GD
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 1/217 (0%)
Query: 42 GNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHS-KFGLVSSTLERMRMNGVRVGHIS 100
G + EA R+ ++M+++GL + + L LSK K GV S
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 101 YTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMY 160
Y +I +C+ ++EA HLL M PDV+++S ++NG+ R G+++ +++ M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 161 KTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLK 220
+ L N+ +Y ++I C++ L EA ++ M G + D L+ FC+ G ++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 221 EAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
A F M + P + II+ + GD ++A
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 105/232 (45%), Gaps = 2/232 (0%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+C Y T + C K A + E G+ N +Y +++ + + + L
Sbjct: 212 SCNVYLTRLSKDCYK--TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 269
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
M + G ISY+ +++G C+ L++ L++ M + + P+ + +I R
Sbjct: 270 LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRI 329
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
K+ A+E +M + ++ + ++Y+TLI +CK +++ A + M+ D T
Sbjct: 330 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
+++ FC+ G + EA M GL+P + F +IN Y +G AF
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TY L+ GHC N++EA+ L EM G + TY L+ G K KF
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLK 126
++MR G+ + D K + + V +D++++
Sbjct: 689 FDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 124/225 (55%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+LP+ + Y TLIDG C +G+I A + EM S + P+ +TY A+++G +
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
M G+ +++T +I+G CK +++A + + M++A +P+VVT++ LI+G
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G +++A E++ +M+K L N Y++++ CK N++EA+ +G +D
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
T L+ +C+SG + +A+ + M GL P+ F+ ++N +
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 117/232 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY TLIDG C +G+++ A LL EM GL+PN TY +++NGL K
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ G+ ++YT ++D CK+ +++A +L +ML + P +VTF+VL+NGF
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G + + ++++ M + N +++L+ YC NLK A Y M G D T
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
LV C++ +KEA + M G S S + +I + L+A
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 685
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 121/232 (52%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ I+Y+T+++G+C G +++ ++L++ M GLKPN YG+++ L + K
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M G+ + YT +IDG CK + A +M I PDV+T++ +I+GF +
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G + A ++ +M+ L +++ ++ LI YCK ++K+A + M +G + T
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
L+ C+ G L A + M ++GL P+ ++ I+N SG+ +A
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 116/228 (50%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S ++ P+ +TY +I G C G++ EA +L EM GL+P+ VT+ L+NG K
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
M G ++YT +IDGLCK L+ A LL +M K + P++ T++ ++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
NG ++G I A +++ + L + + Y+TL+ YCK + +A M G
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
T NVL+ FC G L++ E ++ M G+ P+ + F+ ++ Y
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 125/237 (52%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ +T+ LI+G+C G++++AFR+ + M+ G PN VTY L++GL K +
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L M G++ +Y ++++GLCK+ +EEAV L+ + A +N D VT++ L++ +
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
++G+++ A+EI+ +M L + ++ L+ +C L++ M G +
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
T N LV +C LK A M G+ P ++ ++ + + + +A+FL
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL 653
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 105/219 (47%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L PN TYN++++G C GNIEEA +L+ E + GL + VTY L++ K +
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L+ M G++ +++ +++G C + +LE+ LL+ ML I P+ TF+ L+ +
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ A I M + + Y L+ +CK RN+KEA + M G
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFD 242
T +VL+ F + + EA D M R GL FD
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 109/234 (46%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L PN Y ++I C + EA EM+ G+ P+ V Y L++G K S
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
M + ++YTA+I G C+ + EA L +M + PD VTF+ LING+
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+AG + +A + M + N + Y+TLI CK +L A M G +
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
FT N +V C+SG ++EA + GL+ T + ++++Y SG+ KA
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 112/227 (49%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N +YN +I C G I+EA LL M G P+ ++Y ++NG + + V +
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
E M+ G++ Y ++I LC+ L EA +M++ I PD V ++ LI+GF +
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G I A + +M+ + + + Y+ +I +C++ ++ EA + M G D T
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
L+ +C++G +K+A +HM + G P+ + +I+ GD
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 1/217 (0%)
Query: 42 GNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHS-KFGLVSSTLERMRMNGVRVGHIS 100
G + EA R+ ++M+++GL + + L LSK K GV S
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 101 YTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMY 160
Y +I +C+ ++EA HLL M PDV+++S ++NG+ R G+++ +++ M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 161 KTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLK 220
+ L N+ +Y ++I C++ L EA ++ M G + D L+ FC+ G ++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 221 EAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
A F M + P + II+ + GD ++A
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 105/232 (45%), Gaps = 2/232 (0%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+C Y T + C K A + E G+ N +Y +++ + + + L
Sbjct: 212 SCNVYLTRLSKDCYK--TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLL 269
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
M + G ISY+ +++G C+ L++ L++ M + + P+ + +I R
Sbjct: 270 LLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRI 329
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
K+ A+E +M + ++ + ++Y+TLI +CK +++ A + M+ D T
Sbjct: 330 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
+++ FC+ G + EA M GL+P + F +IN Y +G AF
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TY L+ GHC N++EA+ L EM G + TY L+ G K KF
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREV 688
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLK 126
++MR G+ + D K + + V +D++++
Sbjct: 689 FDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 121/228 (53%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY +++G C +G+ + AF LL++M L+P + Y +++GL K+ +
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M G+R ++Y+++I LC +A LL DM++ INPDV TFS LI+ F++
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK+ A+++ +M K + + + YS+LI +C L EA + M D T
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
N L+ FC+ R++E MS+ GL +T ++ +I +GD
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 124/234 (52%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P + YNT+IDG C ++++A L EM + G++PN VTY +L++ L + ++ S
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L M + +++A+ID K L EA L D+M+K SI+P +VT+S LINGF
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+++ AK++ M + + Y+TLI +CK + ++E + + M+ G V +
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
T N+L+ ++G A+ M G+ P+ ++ +++ +G KA
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 117/223 (52%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +T ++L++G+C I EA L+D+M G +PN VT+ L++GL H+K +
Sbjct: 149 PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMAL 208
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++RM G + ++Y +++GLCK + A +LL+ M + + P V+ ++ +I+G +
Sbjct: 209 IDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK 268
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+++A + +M + N + YS+LI C +A + M D FT
Sbjct: 269 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 328
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
+ L+ F + G+L EAE D M + +DPS + +IN +
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 119/232 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ T++ LID +G + EA +L DEMV + P+ VTY +L+NG H +
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E M ++Y +I G CK + +EE + + +M + + + VT+++LI G +
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AG + A+EI +M + N + Y+TL+ CK L++A+ + + S +T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
N+++ C++G++++ ++S G+ P A++ +I+ + G +A
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 108/222 (48%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
P+ +TYNTLI G C +EE + EM GL N VTY L+ GL + +
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
+ M +GV ++Y ++DGLCKN LE+A+ + + + ++ + P + T++++I G
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+AGK+ + ++ C + + + + Y+T+I +C+ + +EA + M G + +
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
N L+ R G + + + M G S + N
Sbjct: 573 CYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 114/227 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY++LI C+ G +A RLL +M+ + P+ T+ AL++ K K
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKL 348
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M + ++Y+++I+G C + L+EA + + M+ PDVVT++ LI GF +
Sbjct: 349 YDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
++ E+ +M + LV N + Y+ LI + + A + M G + T
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
N L+ C++G+L++A +++ R ++P+ ++ +I +G
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 118/231 (51%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N TY+ LI+ C + + A +L +M+ G +PN VT +LLNG + + +
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
++M + G + +++ +I GL + EA+ L+D M+ PD+VT+ V++NG +
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G + A ++ KM + L ++Y+T+I CK +++ +ALN + M G + T
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ L++ C GR +A + M ++P F +I+++ G ++A
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 3/222 (1%)
Query: 40 SKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHI 99
S+ +++A L EMV P+ + + LL+ ++K +KF +V S E+M+ G+ H
Sbjct: 58 SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 117
Query: 100 SYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKM 159
+Y+ +I+ C+ L A+ +L M+K P++VT S L+NG+ + +I+ A ++ +M
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 160 YKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRL 219
+ T N + ++TLI+ EA+ M G D T V+V C+ G
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 220 KEAEYFMDHMSRMGLDPSTSAFDCIIN---SYGNSGDALKAF 258
A ++ M + L+P ++ II+ Y + DAL F
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 123/238 (51%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+L P +++NTLI+G+C GN++E FRL +M +P+ TY AL+N L K +K
Sbjct: 270 SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ M G+ + +T +I G +N ++ ML + PD+V ++ L+NG
Sbjct: 330 HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNG 389
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
F + G + A+ I+ M + L + I Y+TLI +C+ +++ AL M+ +G D
Sbjct: 390 FCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELD 449
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+ LV C+ GR+ +AE + M R G+ P + +++++ GDA F L
Sbjct: 450 RVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKL 507
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 102/190 (53%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S L P+ + YNTL++G C G++ A ++D M+ GL+P+++TY L++G +
Sbjct: 373 SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVE 432
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ M NG+ + + ++A++ G+CK + +A L +ML+A I PD VT+++++
Sbjct: 433 TALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMM 492
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+ F + G +++ +M V + + Y+ L+ CK+ +K A M + G V
Sbjct: 493 DAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVV 552
Query: 201 SDHFTCNVLV 210
D T N L+
Sbjct: 553 PDDITYNTLL 562
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 86/160 (53%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ ITY TLIDG C G++E A + EM +G++ + V + AL+ G+ K +
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L M G++ ++YT M+D CK + LL +M P VVT++VL+NG
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRN 183
+ G++ NA ++ M +V ++I Y+TL+ + + N
Sbjct: 531 CKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 35/232 (15%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N +N L++ C +GNI +A ++ DE+ L+P V++ L+N
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLIN--------------- 283
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
G CK L+E L M K+ PDV T+S LIN +
Sbjct: 284 --------------------GYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKE 323
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
K++ A + +M K L+ N+++++TLI+ + + + +Y M G D
Sbjct: 324 NKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLY 383
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
N LV FC++G L A +D M R GL P + +I+ + GD A
Sbjct: 384 NTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETAL 435
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 121/235 (51%), Gaps = 8/235 (3%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ ++Y+ LIDG +GN+EEA LL +M+ G++PN +TY A++ GL K K
Sbjct: 276 DVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLF 335
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
R+ G+ V Y +IDG+C+ L A +L DM + I P ++T++ +ING A
Sbjct: 336 NRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMA 395
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G+++ A E+ +V + I YSTL+ +Y K++N+ L + D C
Sbjct: 396 GRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMC 450
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG---DALKAF 258
N+L+ F G EA+ M M L P T+ + +I Y +G +AL+ F
Sbjct: 451 NILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMF 505
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 113/227 (49%), Gaps = 9/227 (3%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+PN +TY TL+ C G ++E L+ + G + + V Y ++G K LV
Sbjct: 203 LVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGG--ALVD 260
Query: 84 STLERMRM--NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
+ ++ M G+ +SY+ +IDGL K +EEA+ LL M+K + P+++T++ +I
Sbjct: 261 ALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIR 320
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
G + GK+ A + ++ + ++ LY TLI C+ NL A + M G
Sbjct: 321 GLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQP 380
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
T N ++ C +GR+ EA D +S+ G+ + +++SY
Sbjct: 381 SILTYNTVINGLCMAGRVSEA----DEVSK-GVVGDVITYSTLLDSY 422
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 1/227 (0%)
Query: 32 NTLIDGHCSKGNIEEAFRLLDEMVSHG-LKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
+ +I G C G E A + V G L PN VTY L++ L + K V + R+
Sbjct: 175 SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
G + Y+ I G K L +A+ +M++ +N DVV++S+LI+G + G +
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVE 294
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLV 210
A ++ KM K + N I Y+ +I CKM L+EA + + G D F L+
Sbjct: 295 EALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLI 354
Query: 211 ATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
CR G L A + M + G+ PS ++ +IN +G +A
Sbjct: 355 DGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA 401
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 101/203 (49%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ I Y +I+G C +G + +A L S G+ N +TY +L+NGL +
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+ + G+ ++Y +ID LCK L +A LLD M+ + P+++ ++ +++G+ +
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G+ +A ++ + + + S++I YCK +++EAL+ + +D F
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Query: 207 NVLVATFCRSGRLKEAEYFMDHM 229
L+ FC GR++EA + M
Sbjct: 834 LFLIKGFCTKGRMEEARGLLREM 856
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 99/197 (50%), Gaps = 5/197 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN ITY +I G C G +EEAF L + ++S G++ +E Y L++G+ + S
Sbjct: 310 PNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSM 369
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L M G++ ++Y +I+GLC + EA D + + DV+T+S L++ +++
Sbjct: 370 LGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIK 424
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
I+ EI + + + ++ ++ + L+ + M EA Y M D T
Sbjct: 425 VQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTAT 484
Query: 206 CNVLVATFCRSGRLKEA 222
++ +C++G+++EA
Sbjct: 485 YATMIKGYCKTGQIEEA 501
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 72/136 (52%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+P+ +TY LID C +G +A +LLD MVS GL PN + Y ++++G K +
Sbjct: 721 LVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAM 780
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ R M V + ++MI G CK +EEA+ + + +I+ D F LI GF
Sbjct: 781 RVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGF 840
Query: 144 LRAGKINNAKEIMCKM 159
G++ A+ ++ +M
Sbjct: 841 CTKGRMEEARGLLREM 856
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 118/271 (43%), Gaps = 47/271 (17%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSK----FGLVSS 84
+ YN +ID C KG ++ A +L E+ GL + T LL+ + + GLV
Sbjct: 517 VCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYG 576
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASIN---P---------- 131
LE++ + V +G ++ ++ LCK E A+ + M + + P
Sbjct: 577 -LEQLNSD-VCLGMLNDAILL--LCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDN 632
Query: 132 ---------------------DVVTFSVLINGFLRAGKINNAKEIMCKMYKTV-LVLNNI 169
DV+ ++++ING + G + A +C K+ + LN I
Sbjct: 633 LRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALN-LCSFAKSRGVTLNTI 691
Query: 170 LYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHM 229
Y++LI C+ L EAL + + + G V T +L+ C+ G +AE +D M
Sbjct: 692 TYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSM 751
Query: 230 SRMGLDPSTSAFDCIINSY---GNSGDALKA 257
GL P+ ++ I++ Y G + DA++
Sbjct: 752 VSKGLVPNIIIYNSIVDGYCKLGQTEDAMRV 782
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 25/227 (11%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S L+PN I YN+++DG+C G E+A R++ + + P+ T +++ G K
Sbjct: 753 SKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDME 812
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTF---- 136
S + + + +I G C +EEA LL +ML ++ VV
Sbjct: 813 EALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML---VSESVVKLINRV 869
Query: 137 ------SVLINGFL----RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKE 186
S I GFL G++ A +I+ ++ T+ L S + N +E
Sbjct: 870 DAELAESESIRGFLVELCEQGRVPQAIKILDEISSTIYPSGKNLGSYQRLQFLNDVNEEE 929
Query: 187 ALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEA-EYFMDHMSRM 232
+ +V D + + V++ C SG+L++A E+ M +S M
Sbjct: 930 -------IKKKDYVHDFHSLHSTVSSLCTSGKLEQANEFVMSVLSCM 969
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 99/214 (46%), Gaps = 3/214 (1%)
Query: 50 LLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISY--TAMIDG 107
L D + +HG P+ +T+ +L+ + + LE M V ++ +A+I G
Sbjct: 121 LRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISG 180
Query: 108 LCKNRLLEEAVHLLDDMLKASI-NPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVL 166
CK E A+ + + + + P++VT++ L++ + GK++ ++++ ++
Sbjct: 181 FCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEF 240
Query: 167 NNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFM 226
+ + YS I+ Y K L +AL M G D + ++L+ + G ++EA +
Sbjct: 241 DCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLL 300
Query: 227 DHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
M + G++P+ + II G +AF L
Sbjct: 301 GKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVL 334
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 50/226 (22%)
Query: 39 CSKGNIEEAFRLLDEMVSHGLK---PNEVTYGALLNGLSKHSKFGLV----SSTLERMRM 91
C +G+ E A + M GL P+ + L++ L + LV +TL M +
Sbjct: 597 CKRGSFEAAIEVYMIMRRKGLTVTFPSTI-LKTLVDNLRSLDAYLLVVNAGETTLSSMDV 655
Query: 92 NGVRVGHISYTAMIDGLCKNRL-----------------------------------LEE 116
I YT +I+GLCK L E
Sbjct: 656 -------IDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVE 708
Query: 117 AVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIY 176
A+ L D + + P VT+ +LI+ + G +A++++ M LV N I+Y++++
Sbjct: 709 ALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVD 768
Query: 177 NYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEA 222
YCK+ ++A+ + D FT + ++ +C+ G ++EA
Sbjct: 769 GYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEA 814
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S ++ + ITY+TL+D + NI+ + + + + V LL +G
Sbjct: 405 SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYG 464
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ M + +Y MI G CK +EEA+ + +++ K+S++ V ++ +I
Sbjct: 465 EADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRII 523
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYN 177
+ + G ++ A E++ ++++ L L+ TL+++
Sbjct: 524 DALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHS 560
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 125/241 (51%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F PN + Y TLIDG C KG IE+A L EM GL NE TY L+NGL K+
Sbjct: 192 FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQ 251
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
E+M+ +GV +Y +++ LCK+ ++A + D+M + ++ ++VT++ LI
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG 311
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
G R K+N A +++ +M + N I Y+TLI +C + L +AL+ + G
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFLC 261
T N+LV+ FCR G A + M G+ PS + +I+++ S + KA L
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 262 L 262
L
Sbjct: 432 L 432
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 117/226 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN ITYNTLIDG C G + +A L ++ S GL P+ VTY L++G + +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++ M G++ ++YT +ID ++ +E+A+ L M + + PDV T+SVLI+GF
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G++N A + M + N ++Y+T+I YCK + AL M + +
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS 251
++ C+ + KEAE ++ M G+DPSTS I + +S
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAKNDS 561
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 125/237 (52%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ PN TYN +++ C G ++AF++ DEM G+ N VTY L+ GL + K +
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEAN 323
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+++M+ +G+ I+Y +IDG C L +A+ L D+ ++P +VT+++L++GF
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
R G + A +++ +M + + + + Y+ LI + + N+++A+ M G V D
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDV 443
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
T +VL+ FC G++ EA M +P+ ++ +I Y G + +A L
Sbjct: 444 HTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKL 500
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+P+ TY+ LI G C KG + EA RL MV +PNEV Y ++ G K
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
L+ M + SY MI+ LCK R +EA L++ M+ + I+P S++
Sbjct: 499 KLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 89/196 (45%), Gaps = 4/196 (2%)
Query: 66 YGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDML 125
Y ++N + L S M NG G + ++ + + + ++
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN- 155
Query: 126 KASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLK 185
K+ + DV +F +LI G AG+I + +++ ++ + N ++Y+TLI CK ++
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 186 EALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
+A + + M G V++ T VL+ ++G K+ + M G+ P+ ++C++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 246 NSY---GNSGDALKAF 258
N G + DA + F
Sbjct: 276 NQLCKDGRTKDAFQVF 291
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 121/227 (53%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T+ +L+ G C I +AF L+ MV G +PN V Y L++GL K+ + +
Sbjct: 139 PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALEL 198
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L M G+ ++Y ++ GLC + +A +L DM+K SINPDVVTF+ LI+ F++
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G ++ A+E+ +M ++ + NN+ Y+++I C L +A T+ +M G + T
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
N L++ FC+ + E MS G + ++ +I+ Y G
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 108/197 (54%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN + YNTLIDG C G + A LL+EM GL + VTY LL GL ++ +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L M + +++TA+ID K L+EA L +M+++S++P+ VT++ +ING
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G++ +AK+ M N + Y+TLI +CK R + E + + M+ G +D FT
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 206 CNVLVATFCRSGRLKEA 222
N L+ +C+ G+L+ A
Sbjct: 354 YNTLIHGYCQVGKLRVA 370
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 107/220 (48%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T+ LID +GN++EA L EM+ + PN VTY +++NGL H + T
Sbjct: 244 PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKT 303
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M G ++Y +I G CK R+++E + L M N D+ T++ LI+G+ +
Sbjct: 304 FDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQ 363
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK+ A +I C M + + I + L++ C ++ AL + M S
Sbjct: 364 VGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVA 423
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
N+++ C++ ++++A + G+ P + +I
Sbjct: 424 YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TYN++I+G C G + +A + D M S G PN VTY L++G K
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+RM G +Y +I G C+ L A+ + M+ + PD++T +L++G
Sbjct: 339 FQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCV 398
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G+I +A M ++ + + Y+ +I+ CK +++A + + G D T
Sbjct: 399 NGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDART 458
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFD 242
+++ C++G +EA+ + M G+ +A D
Sbjct: 459 YTIMILGLCKNGPRREADELIRRMKEEGIICQMNAED 495
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%)
Query: 45 EEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAM 104
E+AF L EMV P+ V + LL + ++ V ++M + G+ S+T +
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 105 IDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVL 164
I C+ L A+ +L M+K P +VTF L++GF +I +A ++ M K+
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 165 VLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEY 224
N ++Y+TLI CK L AL M G +D T N L+ C SGR +A
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 225 FMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ M + ++P F +I+ + G+ +A
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEA 265
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 107/237 (45%), Gaps = 3/237 (1%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
LP+ + + L+ + E +M +G+ + ++ L++ + S+ S
Sbjct: 68 LPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALS 127
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L +M G +++ +++ G C + +A L+ M+K+ P+VV ++ LI+G
Sbjct: 128 VLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC 187
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ G++N A E++ +M K L + + Y+TL+ C +A M D
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVV 247
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS---YGNSGDALKAF 258
T L+ F + G L EA+ M + +DP+ ++ IIN +G DA K F
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S + P+ IT+ L+ G C G IE A D+M V Y +++GL K K
Sbjct: 379 SRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVE 438
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASI 129
R+ + GV+ +YT MI GLCKN EA L+ M + I
Sbjct: 439 KAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 130 bits (327), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 130/270 (48%), Gaps = 35/270 (12%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T+ +L++G+C IE+A L D+++ G KPN VTY L+ L K+
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+M NG R ++Y A++ GLC+ +A LL DM+K I P+V+TF+ LI+ F++
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 146 AGKINNAKE---IMCKM--YKTVLVL------------------------------NNIL 170
GK+ AKE +M +M Y V N ++
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 171 YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMS 230
Y+TLI+ +CK + +++ + + M+ G V++ T VL+ +C GR A+ + MS
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 231 RMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
P ++ +++ +G KA +
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 112/233 (48%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TYN L+ G C G +A LL +M+ ++PN +T+ AL++ K K
Sbjct: 221 PNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKEL 280
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M V +Y ++I+GLC LL+EA + M + P+ V ++ LI+GF +
Sbjct: 281 YNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCK 340
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+ ++ + +I +M + +V N I Y+ LI YC + A + M+ D T
Sbjct: 341 SKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRT 400
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
NVL+ C +G++++A ++M + +D + + II G AF
Sbjct: 401 YNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAF 453
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 105/219 (47%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
++ P+ TY +LI+G C G ++EA ++ M +G PNEV Y L++G K +
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
M GV I+YT +I G C + A + + M PD+ T++VL++G
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
GK+ A I M K + +N + Y+ +I CK+ +++A + + + G +
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAF 241
T +++ FCR G + EA+ M G P+ S +
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 106/239 (44%), Gaps = 3/239 (1%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
LP+ I + L+ + L ++M G+ P T +++ + S+ S
Sbjct: 80 LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASC 139
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L +M G +++T++++G C +E+A+ L D +L P+VVT++ LI
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ +N+A E+ +M N + Y+ L+ C++ +A M +
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS---YGNSGDALKAFFL 260
T L+ F + G+L EA+ + M +M + P + +IN YG +A + F+L
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYL 318
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 121/227 (53%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T+ +LI+G C +EEA ++++MV G+KP+ V Y +++ L K+ S
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++M G+R + YT++++GLC + +A LL M K I PDV+TF+ LI+ F++
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK +A+E+ +M + + N Y++LI +C + EA + +M G D
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVA 319
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
L+ FC+ ++ +A MS+ GL +T + +I +G G
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 121/235 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ + Y T+ID C G++ A L D+M ++G++P+ V Y +L+NGL ++ S
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L M ++ I++ A+ID K +A L ++M++ SI P++ T++ LINGF
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G ++ A+++ M + + Y++LI +CK + + +A+ + M+ G + T
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
L+ F + G+ A+ HM G+ P+ ++ +++ +G KA +
Sbjct: 355 YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 120/243 (49%), Gaps = 3/243 (1%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
++ + P+ + Y +L++G C+ G +A LL M +KP+ +T+ AL++ K KF
Sbjct: 205 NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFL 264
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
M + +YT++I+G C ++EA + M PDVV ++ LI
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
NGF + K+++A +I +M + L N I Y+TLI + ++ A ++ M G
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLD---PSTSAFDCIINSYGNSGDALKA 257
+ T NVL+ C +G++K+A + M + +D P+ ++ +++ +G KA
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Query: 258 FFL 260
+
Sbjct: 445 LMV 447
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 3/213 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ IT+N LID +G +A L +EM+ + PN TY +L+NG
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M G ++YT++I+G CK + +++A+ + +M + + + +T++ LI GF +
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQ 364
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNH---SGHVSD 202
GK N A+E+ M + N Y+ L++ C +K+AL + M G +
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLD 235
+T NVL+ C +G+L++A + M + +D
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKREMD 457
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 3/233 (1%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
T N L++ C A L +M+ G +P+ VT+ +L+NG ++ S + +M
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
G++ + YT +ID LCKN + A+ L D M I PDVV ++ L+NG +G+
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
+A ++ M K + + I ++ LI + K +A Y M + FT L
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY---GNSGDALKAFF 259
+ FC G + EA M G P A+ +IN + DA+K F+
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 108/214 (50%), Gaps = 4/214 (1%)
Query: 46 EAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTA-- 103
EA L MV P+ + + LLN ++K KF +V + + +++ GV H YT
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGV--SHDLYTCNL 112
Query: 104 MIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTV 163
+++ C++ A L M+K PD+VTF+ LINGF ++ A ++ +M +
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 164 LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAE 223
+ + ++Y+T+I + CK ++ AL+ + M + G D LV C SGR ++A+
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 224 YFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ M++ + P F+ +I+++ G L A
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDA 266
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 114/239 (47%), Gaps = 3/239 (1%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
LP+ I + L++ + L D + G+ + T L+N + S+ L SS
Sbjct: 69 LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASS 128
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L +M G +++T++I+G C +EEA+ +++ M++ I PDVV ++ +I+
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC 188
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ G +N A + +M + + ++Y++L+ C ++A + M D
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG---DALKAFFL 260
T N L+ F + G+ +AE + M RM + P+ + +IN + G +A + F+L
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 3/213 (1%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
P+ + Y +LI+G C +++A ++ EM GL N +TY L+ G + K +
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE 373
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASIN---PDVVTFSVLIN 141
M GV +Y ++ LC N +++A+ + +DM K ++ P++ T++VL++
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
G GK+ A + M K + + I Y+ +I CK +K A+N + + G
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGL 234
+ T +++ R G EA M G+
Sbjct: 494 NVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 3/155 (1%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGL---SKHSKFG 80
L N ITY TLI G G A + MVS G+ PN TY LL+ L K K
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL 407
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
++ +++ M+GV +Y ++ GLC N LE+A+ + +DM K ++ ++T++++I
Sbjct: 408 MIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIII 467
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLI 175
G +AGK+ NA + C + + N + Y+T+I
Sbjct: 468 QGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 123/235 (52%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY LI G C +G+ ++A +L EM + G P+ V + ALL+G K +
Sbjct: 231 PNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFEL 290
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L +G +G Y+++IDGL + R +A L +MLK +I PD++ +++LI G +
Sbjct: 291 LRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSK 350
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AGKI +A +++ M + + Y+ +I C L+E + M+ + D T
Sbjct: 351 AGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACT 410
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+L+ + CR+G ++EAE + + G PS + F+ +I+ SG+ +A L
Sbjct: 411 HTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLL 465
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 15/248 (6%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N+ P+ I Y LI G G IE+A +LL M S G+ P+ Y A++ L
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEG 392
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
S M ++T +I +C+N L+ EA + ++ K+ +P V TF+ LI+G
Sbjct: 393 RSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDG 452
Query: 143 FLRAGKINNAKEIMCKM---YKTVLVLN-----NILYSTLIYNYCKMRNLKEALNTYAVM 194
++G++ A+ ++ KM L L N + T++ + ++ +A A
Sbjct: 453 LCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV----ESGSILKAYRDLAHF 508
Query: 195 NHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS---YGNS 251
+G D + NVL+ FCR+G + A ++ + GL P + ++ +IN G
Sbjct: 509 ADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGRE 568
Query: 252 GDALKAFF 259
+A K F+
Sbjct: 569 EEAFKLFY 576
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 107/237 (45%), Gaps = 9/237 (3%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEE-----AFRLLDEMVSHGLKPNEVTYGALLNGLSK 75
F+ P+ TYN ++ EE AF + +EM+ PN T+G L++GL K
Sbjct: 155 EFDCRPDVFTYNVILRVMMR----EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 76 HSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVT 135
+ + M G+ ++YT +I GLC+ ++A L +M + PD V
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 136 FSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMN 195
+ L++GF + G++ A E++ K VL YS+LI + R +A YA M
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 196 HSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
D +L+ ++G++++A + M G+ P T ++ +I + G
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRG 387
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 16/208 (7%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ ++YN LI+G C G+I+ A +LL+ + GL P+ VTY L+NGL + V
Sbjct: 515 PDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHR------VGRE 568
Query: 86 LERMRM----NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
E ++ + R Y +++ C+ R + A +L LK D T + +
Sbjct: 569 EEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQ 628
Query: 142 GFLRAGKINNA--KEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
F + G+ A + I K L L Y+ + C+ EAL ++V+
Sbjct: 629 CF-KEGETERALRRLIELDTRKDELTLGP--YTIWLIGLCQSGRFHEALMVFSVLREKKI 685
Query: 200 VSDHFTCNVLVATFCRSGRLKEA-EYFM 226
+ +C L+ C+ +L A E F+
Sbjct: 686 LVTPPSCVKLIHGLCKREQLDAAIEVFL 713
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 114/227 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TYNTLI C + +EEA L + S G+ P+ T+ +L+ GL +
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E MR G +Y +ID LC L+EA+++L M + V+T++ LI+GF +
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A K A+EI +M + N++ Y+TLI CK R +++A M G D +T
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
N L+ FCR G +K+A + M+ G +P + +I+ +G
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 120/226 (53%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S +LP+ T+N+LI G C N A L +EM S G +P+E TY L++ L K
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ L++M ++G I+Y +IDG CK EA + D+M ++ + VT++ LI
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+G ++ ++ +A ++M +M + Y++L+ ++C+ ++K+A + M +G
Sbjct: 513 DGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCE 572
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
D T L++ C++GR++ A + + G++ + A++ +I
Sbjct: 573 PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQ 618
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 106/223 (47%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
P+ T+NTL++G C G+++ A ++D M+ G P+ TY ++++GL K +
Sbjct: 291 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L++M ++Y +I LCK +EEA L + I PDV TF+ LI G
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
A E+ +M + Y+ LI + C L EALN M SG
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
T N L+ FC++ + +EAE D M G+ ++ ++ +I+
Sbjct: 471 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLID 513
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 120/233 (51%), Gaps = 1/233 (0%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S+ L+P+ T+ T++ G+ +G+++ A R+ ++MV G + V+ +++G K +
Sbjct: 217 SYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVE 276
Query: 81 LVSSTLERMR-MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
+ ++ M +G ++ +++GLCK ++ A+ ++D ML+ +PDV T++ +
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
I+G + G++ A E++ +M N + Y+TLI CK ++EA V+ G
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+ D T N L+ C + + A + M G +P ++ +I+S + G
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSH-GLKPNEVTYGALLNGLSKHSKFGLVSSTLE 87
++ N ++ G C +G +E+A + EM + G P++ T+ L+NGL K ++
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 88 RMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAG 147
M G +Y ++I GLCK ++EAV +LD M+ +P+ VT++ LI+ +
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 148 KINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCN 207
++ A E+ + ++ + +++LI C RN + A+ + M G D FT N
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 208 VLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
+L+ + C G+L EA + M G S ++ +I+ +
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 115/230 (50%), Gaps = 2/230 (0%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSH-GLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
T+ LI+ + +E ++D M+ GLKP+ Y +LN L + LV + +
Sbjct: 120 TFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAK 179
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
M + G++ ++ +I LC+ L A+ +L+DM + PD TF+ ++ G++ G
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVM-NHSGHVSDHFTCN 207
++ A I +M + +N+ + +++ +CK +++ALN M N G D +T N
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 208 VLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
LV C++G +K A MD M + G DP ++ +I+ G+ +A
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 2/217 (0%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ ITYNTLIDG C EA + DEM HG+ N VTY L++GL K + + +
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
++M M G + +Y +++ C+ +++A ++ M PD+VT+ LI+G +A
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVM-NHSGHVSDHFT 205
G++ A +++ + + L Y+ +I + R EA+N + M + D +
Sbjct: 589 GRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVS 648
Query: 206 CNVLVATFCR-SGRLKEAEYFMDHMSRMGLDPSTSAF 241
++ C G ++EA F+ + G P S+
Sbjct: 649 YRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSL 685
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 1/226 (0%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
+ + P+ T+N LI C + A +L++M S+GL P+E T+ ++ G +
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDML-KASINPDVVTFSVLI 140
E+M G ++S ++ G CK +E+A++ + +M + PD TF+ L+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
NG +AG + +A EIM M + + Y+++I CK+ +KEA+ M
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
+ T N L++T C+ +++EA ++ G+ P F+ +I
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 408
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TYN+L+ C G+I++A ++ M S+G +P+ VTYG L++GL K + + S
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKA-SINPDVVTFSVLINGFL 144
L ++M G+ + +Y +I GL + R EA++L +ML+ PD V++ ++ G
Sbjct: 598 LRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLC 657
Query: 145 RAG 147
G
Sbjct: 658 NGG 660
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 120/238 (50%), Gaps = 4/238 (1%)
Query: 26 PNCITYNTLIDGHCS---KGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
PN ++YNTLIDG+C G + +A +L EMV + + PN T+ L++G K
Sbjct: 256 PNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGS 315
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ M V+ ISY ++I+GLC + EA+ + D M+ A + P+++T++ LING
Sbjct: 316 MKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALING 375
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
F + + A ++ + V +Y+ LI YCK+ + + M G V D
Sbjct: 376 FCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPD 435
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
T N L+A CR+G ++ A+ D ++ GL P F ++ Y G++ KA L
Sbjct: 436 VGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAML 492
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 123/232 (53%), Gaps = 2/232 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN T+N LIDG N+ + ++ EM+ +KPN ++Y +L+NGL K S
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISM 353
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++M GV+ I+Y A+I+G CKN +L+EA+ + + P +++LI+ + +
Sbjct: 354 RDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCK 413
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GKI++ + +M + +V + Y+ LI C+ N++ A + + G + D T
Sbjct: 414 LGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVT 472
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
++L+ +CR G ++A + MS+MGL P ++ ++ Y G+ LKA
Sbjct: 473 FHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGN-LKA 523
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 110/233 (47%), Gaps = 2/233 (0%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S + PN ITYN LI+G C ++EA + + G P Y L++ K K
Sbjct: 359 SAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKID 418
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ E M G+ +Y +I GLC+N +E A L D + + PD+VTF +L+
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILM 477
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G+ R G+ A ++ +M K L ++ Y+ ++ YCK NLK A N M +
Sbjct: 478 EGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRL 537
Query: 201 SDHFTC-NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+ NVL+ + + G+L++A ++ M GL P+ ++ + + G
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 104/229 (45%), Gaps = 3/229 (1%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N+ N I + L+ + + E F +G K + ++ L+ L K ++ V
Sbjct: 148 NVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADV 207
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ M ++ ++ +I+ LCK + +A +++DM +P+VV+++ LI+G
Sbjct: 208 EYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDG 267
Query: 143 FLRA---GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
+ + GK+ A ++ +M + + N ++ LI + K NL ++ + M
Sbjct: 268 YCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDV 327
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
+ + N L+ C G++ EA D M G+ P+ ++ +IN +
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 3/200 (1%)
Query: 62 NEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLL 121
N + L+ + +S+F L +R G ++ +S ++ L K + ++
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVY 211
Query: 122 DDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKM 181
+M++ I P+V TF+V+IN + GK+N A+++M M N + Y+TLI YCK+
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 182 RNLKEALNTYAVMNH--SGHVSDHFTC-NVLVATFCRSGRLKEAEYFMDHMSRMGLDPST 238
+ AV+ VS + T N+L+ F + L + M + P+
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 239 SAFDCIINSYGNSGDALKAF 258
+++ +IN N G +A
Sbjct: 332 ISYNSLINGLCNGGKISEAI 351
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 127 bits (318), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 122/235 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN + YNT+IDG C ++ A LL+ M G+ P+ VTY +L++GL ++ +
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M + ++ A+ID K + EA ++M++ S++PD+VT+S+LI G
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+++ A+E+ M + + YS LI YCK + ++ + + M+ G V + T
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+L+ +CR+G+L AE M G+ P+ ++ +++ ++G KA +
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVI 418
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 117/227 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T+ +L++G C + +A + D+MV G KPN V Y +++GL K +
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L RM +G+ ++Y ++I GLC + +A ++ M K I PDV TF+ LI+ ++
Sbjct: 209 LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G+++ A+E +M + L + + YS LIY C L EA + M G D T
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT 328
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
++L+ +C+S +++ MS+ G+ +T + +I Y +G
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 118/233 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TYN+LI G CS G +A R++ M + P+ T+ AL++ K +
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E M + ++Y+ +I GLC L+EA + M+ PDVVT+S+LING+ +
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+ K+ + ++ C+M + +V N + Y+ LI YC+ L A + M G + T
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
NVL+ C +G++++A + M + G+D ++ II +G+ A+
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 113/219 (51%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+ P+ T+N LID +G + EA +EM+ L P+ VTY L+ GL +S+
Sbjct: 251 EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEA 310
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
M G ++Y+ +I+G CK++ +E + L +M + + + VT+++LI G
Sbjct: 311 EEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQG 370
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+ RAGK+N A+EI +M + N I Y+ L++ C +++AL A M +G +D
Sbjct: 371 YCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDAD 430
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAF 241
T N+++ C++G + +A ++ GL P +
Sbjct: 431 IVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+L P+ +TY+ LI G C ++EA + MVS G P+ VTY L+NG K K
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
M GV ++YT +I G C+ L A + M+ ++P+++T++VL++G
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
GKI A I+ M K + + + Y+ +I CK + +A + Y +N G + D
Sbjct: 406 LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDP 236
+T ++ + G +EA+ M G+ P
Sbjct: 466 IWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N T N L++ C + A L +M+ G +P+ VT+G+LLNG + +
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
++M G + + Y +IDGLCK++ ++ A+ LL+ M K I PDVVT++ LI+G +
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G+ ++A ++ M K + + ++ LI K + EA Y M D T
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS 251
++L+ C RL EAE M G P + +IN Y S
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKS 339
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 110/225 (48%), Gaps = 8/225 (3%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
LP+ ++ L+ + L ++M G+ N T LLN + S+ L S
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 85 TLERMRMNGVRVGH----ISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
L +M +++GH +++ ++++G C+ + +A+++ D M+ P+VV ++ +I
Sbjct: 138 FLGKM----IKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTII 193
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+G ++ +++NA +++ +M K + + + Y++LI C +A + M
Sbjct: 194 DGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY 253
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
D FT N L+ + GR+ EAE F + M R LDP + +I
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%)
Query: 43 NIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYT 102
++++ L MV P+ + LL+ +SK K+ +V E+M+M G+ +
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 103 AMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKT 162
+++ C+ L A+ L M+K P +VTF L+NGF R ++ +A + +M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 163 VLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEA 222
N ++Y+T+I CK + + AL+ M G D T N L++ C SGR +A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 223 EYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ M++ + P F+ +I++ G +A
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
++ N +TY LI G+C G + A + MV G+ PN +TY LL+GL + K
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L M+ NG+ ++Y +I G+CK + +A + + + PD+ T++ ++ G
Sbjct: 417 VILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNN 168
+ G A + KM + ++ N
Sbjct: 477 YKKGLRREADALFRKMKEDGILPNE 501
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 119/229 (51%), Gaps = 1/229 (0%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
T+N LI G C G E+A LL M G +P+ VTY L+ G K ++ S + +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 90 RMNGV-RVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
+ V ++YT+MI G CK + EA LLDDML+ I P VTF+VL++G+ +AG+
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
+ A+EI KM + + +++LI YC++ + + + MN G + FT ++
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
L+ C RL +A + ++ + P ++ +I+ + +G +A
Sbjct: 388 LINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 36/243 (14%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY ++I G+C G + EA LLD+M+ G+ P VT+ L++G +K +
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN---- 141
+M G +++T++IDG C+ + + L ++M + P+ T+S+LIN
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 142 -------------------------------GFLRAGKINNAKEIMCKMYKTVLVLNNIL 170
GF +AGK+N A I+ +M K + I
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 171 YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMS 230
++ LI +C + EA++ + M G D T + L++ ++G KEA Y ++ ++
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA-YHLNQIA 513
Query: 231 RMG 233
R G
Sbjct: 514 RKG 516
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 2/182 (1%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
SF P+ +T+ +LIDG+C G + + FRL +EM + G+ PN TY L+N L ++
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
L ++ + Y +IDG CK + EA ++++M K PD +TF++LI
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEA--LNTYAVMNHSG 198
G G++ A I KM + I S+L+ K KEA LN A S
Sbjct: 460 IGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSN 519
Query: 199 HV 200
+V
Sbjct: 520 NV 521
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 1/238 (0%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
SF + C+ N+L++ +E+A +L DE + + T+ L+ GL K
Sbjct: 164 SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAE 223
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASI-NPDVVTFSVL 139
L M G ++Y +I G CK+ L +A + D+ S+ +PDVVT++ +
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSM 283
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
I+G+ +AGK+ A ++ M + + N+ ++ L+ Y K + A M G
Sbjct: 284 ISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC 343
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
D T L+ +CR G++ + + M+ G+ P+ + +IN+ N LKA
Sbjct: 344 FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 115/230 (50%), Gaps = 5/230 (2%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TYN L C G + A ++ + M S G+ PN G L++ ++ K ++ L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ V + ++++ L K +E+A+ L D+ L+ D TF++LI G GK
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV--SDHFTCN 207
A E++ M + + Y+TLI +CK L +A + + SG V D T
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK-SGSVCSPDVVTYT 281
Query: 208 VLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+++ +C++G+++EA +D M R+G+ P+ F+ +++ Y +G+ L A
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 119/229 (51%), Gaps = 1/229 (0%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
T+N LI G C G E+A LL M G +P+ VTY L+ G K ++ S + +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 90 RMNGV-RVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
+ V ++YT+MI G CK + EA LLDDML+ I P VTF+VL++G+ +AG+
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
+ A+EI KM + + +++LI YC++ + + + MN G + FT ++
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
L+ C RL +A + ++ + P ++ +I+ + +G +A
Sbjct: 388 LINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 36/243 (14%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY ++I G+C G + EA LLD+M+ G+ P VT+ L++G +K +
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN---- 141
+M G +++T++IDG C+ + + L ++M + P+ T+S+LIN
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 142 -------------------------------GFLRAGKINNAKEIMCKMYKTVLVLNNIL 170
GF +AGK+N A I+ +M K + I
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 171 YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMS 230
++ LI +C + EA++ + M G D T + L++ ++G KEA Y ++ ++
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA-YHLNQIA 513
Query: 231 RMG 233
R G
Sbjct: 514 RKG 516
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 2/182 (1%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
SF P+ +T+ +LIDG+C G + + FRL +EM + G+ PN TY L+N L ++
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL 399
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
L ++ + Y +IDG CK + EA ++++M K PD +TF++LI
Sbjct: 400 KARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILI 459
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEA--LNTYAVMNHSG 198
G G++ A I KM + I S+L+ K KEA LN A S
Sbjct: 460 IGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSN 519
Query: 199 HV 200
+V
Sbjct: 520 NV 521
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 1/238 (0%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
SF + C+ N+L++ +E+A +L DE + + T+ L+ GL K
Sbjct: 164 SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAE 223
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASI-NPDVVTFSVL 139
L M G ++Y +I G CK+ L +A + D+ S+ +PDVVT++ +
Sbjct: 224 KALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSM 283
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
I+G+ +AGK+ A ++ M + + N+ ++ L+ Y K + A M G
Sbjct: 284 ISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC 343
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
D T L+ +CR G++ + + M+ G+ P+ + +IN+ N LKA
Sbjct: 344 FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 115/230 (50%), Gaps = 5/230 (2%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TYN L C G + A ++ + M S G+ PN G L++ ++ K ++ L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ V + ++++ L K +E+A+ L D+ L+ D TF++LI G GK
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV--SDHFTCN 207
A E++ M + + Y+TLI +CK L +A + + SG V D T
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK-SGSVCSPDVVTYT 281
Query: 208 VLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+++ +C++G+++EA +D M R+G+ P+ F+ +++ Y +G+ L A
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 123/245 (50%), Gaps = 6/245 (2%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S N P ITY LI+ +G ++EA +L+DEM+S GLKP+ TY ++ G+ K G
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE---G 277
Query: 81 LVSSTLERMR---MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFS 137
+V E +R + G ISY ++ L EE L+ M +P+VVT+S
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 138 VLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHS 197
+LI R GKI A ++ M + L + Y LI +C+ L A+ M
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 198 GHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
G + D N ++AT C++G+ +A + +G P++S+++ + ++ +SGD ++A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 258 FFLCL 262
+ L
Sbjct: 458 LHMIL 462
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 119/233 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TYN +I CS+G ++ A ++L++++S +P +TY L+
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++ M G++ +Y +I G+CK +++ A ++ ++ PDV+++++L+ L
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLN 310
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK +++M KM+ N + YS LI C+ ++EA+N +M G D ++
Sbjct: 311 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
+ L+A FCR GRL A F++ M G P ++ ++ + +G A +A
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ I+YN L+ ++G EE +L+ +M S PN VTY L+ L + K +
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L+ M+ G+ SY +I C+ L+ A+ L+ M+ PD+V ++ ++ +
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCK 415
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK + A EI K+ + N+ Y+T+ + AL+ M +G D T
Sbjct: 416 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEIT 475
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
N +++ CR G + EA + M PS ++ ++
Sbjct: 476 YNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 108/235 (45%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY+ LI C G IEEA LL M GL P+ +Y L+ + + +
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
LE M +G ++Y ++ LCKN ++A+ + + + +P+ +++ + +
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+G A ++ +M + + I Y+++I C+ + EA M T
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVT 510
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
N+++ FC++ R+++A ++ M G P+ + + +I G +G +A L
Sbjct: 511 YNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Query: 116 EAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLI 175
E++HLL+ M++ NPDV+ + LI GF I A +M ++ + + Y+ LI
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALI 165
Query: 176 YNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLD 235
+CKM + +A M D T N+++ + C G+L A ++ +
Sbjct: 166 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQ 225
Query: 236 PSTSAFDCIINSY---GNSGDALK 256
P+ + +I + G +ALK
Sbjct: 226 PTVITYTILIEATMLEGGVDEALK 249
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 125/239 (52%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F +PN + YNT+I+G C ++ A + M G++ + VTY L++GLS ++
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
+ L M + I +TA+ID K L EA +L +M++ S+ P+V T++ LIN
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
GF G + +AK + M + + Y+TLI +CK + +++ + + M + G V
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
D FT N L+ +C++G+L A+ + M G+ P ++ +++ N+G KA +
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 116/236 (49%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN I + LID +GN+ EA L EM+ + PN TY +L+NG H G
Sbjct: 252 PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYM 311
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M G ++Y +I G CK++ +E+ + L +M + D T++ LI+G+ +
Sbjct: 312 FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 371
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AGK+N A+++ +M + + + Y+ L+ C +++AL + S D T
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 431
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFLC 261
N+++ CR+ +LKEA ++R G+ P A+ +I+ G +A LC
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 487
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 120/238 (50%), Gaps = 2/238 (0%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +TYNTLI G + G +A RLL +MV + PN + + AL++ K +
Sbjct: 218 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 277
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+ M V +Y ++I+G C + L +A ++ D M+ PDVVT++ LI GF ++
Sbjct: 278 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
++ + ++ C+M LV + Y+TLI+ YC+ L A + M G D T
Sbjct: 338 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 397
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFLCLIK 264
N+L+ C +G++++A ++ + + +D ++ II + D LK + CL +
Sbjct: 398 NILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT-DKLKEAW-CLFR 453
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+++PN TYN+LI+G C G + +A + D MVS G P+ VTY L+ G K +
Sbjct: 284 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
M G+ +Y +I G C+ L A + + M+ ++PD+VT+++L++
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 403
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
GKI A ++ + K+ + ++ I Y+ +I C+ LKEA + + G D
Sbjct: 404 LCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPD 463
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFD 242
+++ CR G +EA+ M G PS +D
Sbjct: 464 AIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 105/209 (50%), Gaps = 3/209 (1%)
Query: 53 EMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNR 112
+M+ G +P+ VT G+LLNG + ++F S ++ M G + Y +I+GLCKNR
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 113 LLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYS 172
L A+ + M K I D VT++ LI+G +G+ +A ++ M K + N I ++
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 173 TLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRM 232
LI + K NL EA N Y M V + FT N L+ FC G L +A+Y D M
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 233 GLDPSTSAFDCIINSYGNSG---DALKAF 258
G P ++ +I + S D +K F
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLF 347
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 2/220 (0%)
Query: 38 HCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVG 97
HC K ++AF L EM+ P+ V + +L ++K +KF +V +M G+
Sbjct: 56 HCIK--FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHD 113
Query: 98 HISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMC 157
S+T +I C+ L A+ LL M+K P +VT L+NGF + + A ++
Sbjct: 114 LYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVD 173
Query: 158 KMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSG 217
M V N ++Y+T+I CK R+L AL + M G +D T N L++ SG
Sbjct: 174 SMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG 233
Query: 218 RLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
R +A + M + +DP+ F +I+++ G+ L+A
Sbjct: 234 RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 273
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 113/226 (50%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S + PN +TYNTLI G C +EE L EM GL N VTY L+ GL +
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ ++M +GV I+Y+ ++DGLCK LE+A+ + + + K+ + PD+ T++++I
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G +AGK+ + ++ C + + N I+Y+T+I +C+ +EA + M G +
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
+ T N L+ R G + + M G S +IN
Sbjct: 568 PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 125/263 (47%), Gaps = 35/263 (13%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +T+NTLI G EA L+D MV+ G +P+ TYG ++NGL K L S
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 86 LERMRMNGVRVGHISYTAMIDGLCK--------------------------NRLLE---- 115
L++M + + YT +ID LC N L+
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 116 -----EAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNIL 170
+A LL DM++ INP+VVTFS LI+ F++ GK+ A+++ +M K + +
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 171 YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMS 230
YS+LI +C L EA + + +M + T N L+ FC++ R++E MS
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 231 RMGLDPSTSAFDCIINSYGNSGD 253
+ GL +T ++ +I +GD
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGD 445
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 118/235 (50%), Gaps = 3/235 (1%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ + Y T+ID C+ N+ +A L EM + G++PN VTY +L+ L + ++ S L
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
M + ++++A+ID K L EA L D+M+K SI+PD+ T+S LINGF
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
+++ AK + M N + Y+TLI +CK + ++E + + M+ G V + T
Sbjct: 374 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN---SYGNSGDALKAF 258
N L+ ++G A+ M G+ P + +++ YG AL F
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 114/227 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +T++ LID +G + EA +L DEM+ + P+ TY +L+NG H +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E M ++Y +I G CK + +EE + L +M + + + VT++ LI G +
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AG + A++I KM + + I YS L+ CK L++AL + + S D +T
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
N+++ C++G++++ +S G+ P+ + +I+ + G
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 116/227 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TYN+LI C+ G +A RLL +M+ + PN VT+ AL++ K K
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M + +Y+++I+G C + L+EA H+ + M+ P+VVT++ LI GF +
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A ++ E+ +M + LV N + Y+TLI + + A + M G D T
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
++L+ C+ G+L++A +++ + ++P ++ +I +G
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
+YN LI+ C + + A +L +M+ G +P+ VT +LLNG + + +++M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ + +++ +I GL + EAV L+D M+ PD+ T+ ++NG + G I
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
+ A ++ KM K + + ++Y+T+I C +N+ +ALN + M++ G + T N L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ C GR +A + M ++P+ F +I+++ G ++A
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 111/223 (49%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T ++L++G+C I EA L+D+M +PN VT+ L++GL H+K +
Sbjct: 148 PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVAL 207
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++RM G + +Y +++GLCK ++ A+ LL M K I DVV ++ +I+
Sbjct: 208 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 267
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+N+A + +M + N + Y++LI C +A + M + T
Sbjct: 268 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 327
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
+ L+ F + G+L EAE D M + +DP + +IN +
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 3/219 (1%)
Query: 43 NIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYT 102
+++A L EMV P+ V + LL+ ++K +KF LV S ERM+ + SY
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 103 AMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKT 162
+I+ C+ L A+ +L M+K PD+VT S L+NG+ +I+ A ++ +M+
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 163 VLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEA 222
N + ++TLI+ EA+ M G D FT +V C+ G + A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 223 EYFMDHMSRMGLDPSTSAFDCIINS---YGNSGDALKAF 258
+ M + ++ + II++ Y N DAL F
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF 278
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN I Y T+I G C KG EEA L EM G PN TY L+ + +
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEA 117
++ MR G VG S +M+ + + LE++
Sbjct: 593 IKEMRSCGF-VGDASTISMVINMLHDGRLEKS 623
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 117/235 (49%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ ITY LI+ C + A +LLDEM G P+ VTY L+NG+ K +
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L M +G + I++ ++ +C +A LL DML+ +P VVTF++LIN R
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G + A +I+ KM + N++ Y+ L++ +CK + + A+ M G D T
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
N ++ C+ G++++A ++ +S G P ++ +I+ +G KA L
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 118/235 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T+N LI+ C KG + A +L++M HG +PN ++Y LL+G K K
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
LERM G ++Y M+ LCK+ +E+AV +L+ + +P ++T++ +I+G +
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AGK A +++ +M L + I YS+L+ + + EA+ + G + T
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVT 521
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
N ++ C+S + A F+ M G P+ +++ +I G A +A L
Sbjct: 522 FNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 576
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 3/224 (1%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
+P+ ITYN +I G+C G I A +LD M + P+ VTY +L L K
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L+RM I+YT +I+ C++ + A+ LLD+M PDVVT++VL+NG
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ G+++ A + + M + N I ++ ++ + C +A A M G
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
T N+L+ CR G L A ++ M + G P++ +++ +++ +
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 3/222 (1%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
+P+ I TLI G C G +A ++L+ + G P+ +TY +++G K + S
Sbjct: 134 VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALS 193
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L+RM V ++Y ++ LC + L++A+ +LD ML+ PDV+T+++LI
Sbjct: 194 VLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
R + +A +++ +M + + Y+ L+ CK L EA+ M SG +
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
T N+++ + C +GR +AE + M R G PS F+ +IN
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN ++YN L+ G C + ++ A L+ MVS G P+ VTY +L L K K
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L ++ G I+Y +IDGL K +A+ LLD+M + PD +T+S L+ G R
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK++ A + + + + N + +++++ CK R A++ M + G + +
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 556
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSA 240
+L+ G KEA ++ + GL +SA
Sbjct: 557 YTILIEGLAYEGMAKEALELLNELCNKGLMKKSSA 591
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 3/216 (1%)
Query: 42 GNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISY 101
G +EE F+ L+ MV HG P+ + L+ G + K + LE + +G I+Y
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 102 TAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYK 161
MI G CK + A+ +LD M S++PDVVT++ ++ +GK+ A E++ +M +
Sbjct: 176 NVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 162 TVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKE 221
+ I Y+ LI C+ + A+ M G D T NVLV C+ GRL E
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 222 AEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
A F++ M G P+ + I+ S ++G + A
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 113/255 (44%), Gaps = 35/255 (13%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPN----------------------- 62
P+ +TYN L++G C +G ++EA + L++M S G +PN
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 63 ------------EVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCK 110
VT+ L+N L + G LE+M +G + +SY ++ G CK
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 111 NRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNIL 170
+ ++ A+ L+ M+ PD+VT++ ++ + GK+ +A EI+ ++ I
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 171 YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMS 230
Y+T+I K +A+ M D T + LV R G++ EA F
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 231 RMGLDPSTSAFDCII 245
RMG+ P+ F+ I+
Sbjct: 512 RMGIRPNAVTFNSIM 526
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+L P+ ITY++L+ G +G ++EA + E G++PN VT+ +++ GL K +
Sbjct: 479 DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDM 124
L M G + SYT +I+GL + +EA+ LL+++
Sbjct: 539 IDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+R G++ + + M V + I +TLI +C++ ++A ++ SG V D
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
T NV+++ +C++G + A +D RM + P ++ I+ S +SG +A
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAM 224
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 123/228 (53%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY +++G C +G+I+ AF LL++M + ++ N V Y +++ L K+ +
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M GVR I+Y+++I LC +A LL DM++ INP+VVTF+ LI+ F++
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK+ A+++ +M K + + YS+LI +C L EA + + +M + T
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
N L+ FC++ R+ E MS+ GL +T + +I+ + + D
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 121/227 (53%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN ITY++LI C+ +A RLL +M+ + PN VT+ AL++ K K
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M + +Y+++I+G C + L+EA H+ + M+ P+VVT++ LINGF +
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A +I+ E+ +M + LV N + Y+TLI+ + + R+ A + M G + T
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
N L+ C++G+L++A +++ R ++P+ ++ +I +G
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 519
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 122/231 (52%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N TYN LI+ C + I A LL +M+ G +P+ VT +LLNG + + +
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
++M G R I++T +I GL + EAV L+D M++ P++VT+ V++NG +
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G I+ A ++ KM + N ++YST+I + CK R+ +ALN + M + G + T
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ L++ C R +A + M ++P+ F+ +I+++ G ++A
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 116/227 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +T+N LID +G + EA +L DEM+ + P+ TY +L+NG H +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E M ++Y +I+G CK + ++E V L +M + + + VT++ LI+GF +
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A +NA+ + +M + N + Y+TL+ CK L++A+ + + S +T
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
N+++ C++G++++ +S G+ P ++ +I+ + G
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKG 554
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 122/246 (49%), Gaps = 9/246 (3%)
Query: 21 SFNLL---------PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLN 71
+FNLL N + Y+T+ID C + ++A L EM + G++PN +TY +L++
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 72 GLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINP 131
L + ++ S L M + +++ A+ID K L EA L D+M+K SI+P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 132 DVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTY 191
D+ T+S LINGF +++ AK + M N + Y+TLI +CK + + E + +
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 192 AVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS 251
M+ G V + T L+ F ++ A+ M G+ P+ ++ +++ +
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Query: 252 GDALKA 257
G KA
Sbjct: 484 GKLEKA 489
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 115/223 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T ++L++G+C I +A L+D+MV G +P+ +T+ L++GL H+K +
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 212
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++RM G + ++Y +++GLCK ++ A +LL+ M A I +VV +S +I+ +
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCK 272
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
++A + +M + N I YS+LI C +A + M + T
Sbjct: 273 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVT 332
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
N L+ F + G+L EAE D M + +DP + +IN +
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 99/185 (53%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S + PN +TYNTLI+G C I+E L EM GL N VTY L++G +
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
++M +GV ++Y ++DGLCKN LE+A+ + + + ++ + P + T++++I
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G +AGK+ + ++ C + + + I+Y+T+I +C+ +EA + M G +
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPL 572
Query: 201 SDHFT 205
D T
Sbjct: 573 PDSGT 577
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 3/218 (1%)
Query: 44 IEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTA 103
+++A L MV P+ + LL+ ++K KF LV S E+M+ G+ +Y
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 104 MIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTV 163
+I+ C+ + A+ LL M+K P +VT S L+NG+ +I++A ++ +M +
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 164 LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAE 223
+ I ++TLI+ EA+ M G + T V+V C+ G + A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 224 YFMDHMSRMGLDPSTSAFDCIINS---YGNSGDALKAF 258
++ M ++ + + +I+S Y + DAL F
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 73/161 (45%)
Query: 100 SYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKM 159
+ ++ + K + + + L + M + I+ ++ T+++LIN F R +I+ A ++ KM
Sbjct: 87 EFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 146
Query: 160 YKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRL 219
K + + S+L+ YC + + +A+ M G+ D T L+ +
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 220 KEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
EA +D M + G P+ + ++N GD AF L
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 124 bits (312), Expect = 5e-29, Method: Composition-based stats.
Identities = 65/226 (28%), Positives = 120/226 (53%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +YNTL+D C G ++ AF +L +M + PN V+Y +++G +K +F +
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
MR G+ + +SY ++ K EEA+ +L +M I DVVT++ L+ G+ +
Sbjct: 433 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 492
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
GK + K++ +M + ++ N + YSTLI Y K KEA+ + +G +D
Sbjct: 493 GKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLY 552
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+ L+ C++G + A +D M++ G+ P+ ++ II+++G S
Sbjct: 553 SALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSA 598
Score = 114 bits (284), Expect = 1e-25, Method: Composition-based stats.
Identities = 67/242 (27%), Positives = 122/242 (50%), Gaps = 6/242 (2%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIE--EAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF 79
+ L PN +TYN +ID C KG +E + + DEM +G++P+ +T+ +LL S+ +
Sbjct: 297 YGLRPNLVTYNAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
+ + M + SY ++D +CK ++ A +L M I P+VV++S +
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
I+GF +AG+ + A + +M + L+ + Y+TL+ Y K+ +EAL+ M G
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG---DALK 256
D T N L+ + + G+ E + M R + P+ + +I+ Y G +A++
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Query: 257 AF 258
F
Sbjct: 536 IF 537
Score = 113 bits (283), Expect = 1e-25, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 121/232 (52%), Gaps = 3/232 (1%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHS-KFGLVSSTLERM 89
++ LI + G EEA + + M +GL+PN VTY A+++ K +F V+ + M
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ NGV+ I++ +++ + L E A +L D+M I DV +++ L++ + G++
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
+ A EI+ +M ++ N + YST+I + K EALN + M + G D + N L
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG--DALKAFF 259
++ + + GR +EA + M+ +G+ ++ ++ YG G D +K F
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Score = 92.4 bits (228), Expect = 3e-19, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 3/227 (1%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
++PN ++Y+T+IDG G +EA L EM G+ + V+Y LL+ +K +
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 464
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L M G++ ++Y A++ G K +E + +M + + P+++T+S LI+G+
Sbjct: 465 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G A EI + L + +LYS LI CK + A++ M G +
Sbjct: 525 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGN 250
T N ++ F RS + + D+ + L S+SA + + GN
Sbjct: 585 VTYNSIIDAFGRSATMDRSA---DYSNGGSLPFSSSALSALTETEGN 628
Score = 89.4 bits (220), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 76/134 (56%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S + + +TYN L+ G+ +G +E ++ EM + PN +TY L++G SK +
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ G+R + Y+A+ID LCKN L+ AV L+D+M K I+P+VVT++ +I
Sbjct: 532 EAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Query: 141 NGFLRAGKINNAKE 154
+ F R+ ++ + +
Sbjct: 592 DAFGRSATMDRSAD 605
Score = 51.2 bits (121), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/196 (20%), Positives = 91/196 (46%), Gaps = 6/196 (3%)
Query: 68 ALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKA 127
A+++ L ++ K + E G +++A+I ++ L EEA+ + + M +
Sbjct: 238 AMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY 297
Query: 128 SINPDVVTFSVLINGFLRAG-KINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKE 186
+ P++VT++ +I+ + G + + +M + + + I +++L+ C L E
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGLWE 356
Query: 187 AL-NTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
A N + M + D F+ N L+ C+ G++ A + M + P+ ++ +I
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 246 NSYGNSG---DALKAF 258
+ + +G +AL F
Sbjct: 417 DGFAKAGRFDEALNLF 432
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 120/227 (52%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN ITY++LI C+ G +A RLL +M+ + PN VT+ AL++ K K
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E M + +Y+++I+G C L EA +L+ M++ P+VVT++ LINGF +
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A +++ E+ +M + LV N + Y+TLI+ + + R+ A + M G + T
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 465
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
N+L+ C++G+L +A +++ R ++P ++ +I +G
Sbjct: 466 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 121/228 (53%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY +++G C +G+ + A LL++M + ++ N V Y +++ L K+ +
Sbjct: 216 PDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 275
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M GVR I+Y+++I LC +A LL DM++ INP++VTFS LI+ F++
Sbjct: 276 FTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVK 335
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK+ A+++ +M K + N YS+LI +C + L EA +M + + T
Sbjct: 336 KGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT 395
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
N L+ FC++ R+ + MS+ GL +T + +I+ + + D
Sbjct: 396 YNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 122/231 (52%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N + Y+T+ID C + ++A L EM + G++PN +TY +L++ L + ++ S L
Sbjct: 252 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL 311
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
M + ++++A+ID K L +A L ++M+K SI+P++ T+S LINGF
Sbjct: 312 SDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCML 371
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
++ AK+++ M + + N + Y+TLI +CK + + + + + M+ G V + T
Sbjct: 372 DRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTY 431
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
L+ F ++ A+ M +G+ P+ ++ +++ +G KA
Sbjct: 432 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 482
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 116/223 (52%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T N+L++G C I +A L+D+MV G KP+ VT+ L++GL H+K +
Sbjct: 146 PDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVAL 205
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++RM G + ++Y A+++GLCK + A++LL+ M A I +VV +S +I+ +
Sbjct: 206 IDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCK 265
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
++A + +M + N I YS+LI C +A + M + T
Sbjct: 266 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVT 325
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
+ L+ F + G+L +AE + M + +DP+ + +IN +
Sbjct: 326 FSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 120/231 (51%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N TYN LI+ C + A LL +M+ G +P+ VT +LLNG ++ + +
Sbjct: 112 NLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALV 171
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
++M G + +++T +I GL + EAV L+D M++ PD+VT+ ++NG +
Sbjct: 172 DQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKR 231
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G + A ++ KM + N ++YST+I + CK R+ +ALN + M + G + T
Sbjct: 232 GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ L++ C GR +A + M ++P+ F +I+++ G +KA
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 102/195 (52%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +T++ LID KG + +A +L +EM+ + PN TY +L+NG + G
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
LE M ++Y +I+G CK + +++ + L +M + + + VT++ LI+GF +
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 440
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A +NA+ + +M + N + Y+ L+ CK L +A+ + + S D +T
Sbjct: 441 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 500
Query: 206 CNVLVATFCRSGRLK 220
N+++ C++G+ K
Sbjct: 501 YNIMIEGMCKAGKWK 515
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 71/124 (57%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
LPN +TYNTLI+G C +++ L EM GL N VTY L++G +
Sbjct: 390 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 449
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
++M GV ++Y ++DGLCKN L +A+ + + + ++++ PD+ T++++I G
Sbjct: 450 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 509
Query: 145 RAGK 148
+AGK
Sbjct: 510 KAGK 513
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 106/231 (45%), Gaps = 3/231 (1%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
Y ++ S +++A L M P+ + + LL+ ++K +KF LV S E+M
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
+ G+ +Y +I+ C+ L A+ LL M+K PD+VT + L+NGF +I+
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLV 210
+A ++ +M + + + ++TLI+ EA+ M G D T +V
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 211 ATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS---YGNSGDALKAF 258
C+ G A ++ M ++ + + +I+S Y + DAL F
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 276
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+ N +TY TLI G + + A + +MVS G+ PN +TY LL+GL K+ K
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 483
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCK 110
E ++ + + +Y MI+G+CK
Sbjct: 484 VVFEYLQRSTMEPDIYTYNIMIEGMCK 510
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 121/228 (53%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY T+++G C +G+I+ A LL++M + +K N V + +++ L K+ +
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDL 280
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M G+R ++Y ++I+ LC +A LL +ML+ INP+VVTF+ LI+ F +
Sbjct: 281 FTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFK 340
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK+ A+++ +M + + + I Y+ LI +C L EA + M + + T
Sbjct: 341 EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT 400
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
N L+ FC+ R+++ MS+ GL +T + II + +GD
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 119/235 (50%), Gaps = 3/235 (1%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N + +NT+ID C ++E A L EM + G++PN VTY +L+N L + ++ S L
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
M + +++ A+ID K L EA L ++M++ SI+PD +T+++LINGF
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
+++ AK++ M + N Y+TLI +CK + +++ + + M+ G V + T
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN---SYGNSGDALKAF 258
++ F ++G A+ M + + +++ SYG AL F
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF 491
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 119/228 (52%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TY+ I+ C + + A +L +M+ G +P+ VT +LLNG + + +++M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
G + ++T +I GL + EAV L+D M++ PD+VT+ ++NG + G I
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
+ A ++ KM + N ++++T+I + CK R+++ A++ + M G + T N L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ C GR +A + +M ++P+ F+ +I+++ G ++A
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEA 347
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 115/235 (48%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TYN+LI+ C+ G +A RLL M+ + PN VT+ AL++ K K
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E M + I+Y +I+G C + L+EA + M+ P++ T++ LINGF +
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
++ + E+ +M + LV N + Y+T+I + + + A + M + +D T
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
++L+ C G+L A ++ + ++ + ++ +I +G +A+ L
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 3/222 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ ITYN LI+G C ++EA ++ MVS PN TY L+NG K +
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M G+ ++YT +I G + + A + M+ + D++T+S+L++G
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS 480
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK++ A I + K+ + LN +Y+T+I CK + EA + + ++ D T
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVT 537
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
N +++ C L+EA+ M G P++ ++ +I +
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 3/226 (1%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S + LPN TYNTLI+G C +E+ L EM GL N VTY ++ G +
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
++M N V ++Y+ ++ GLC L+ A+ + + K+ + ++ ++ +I
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G +AGK+ A ++ C + + + + Y+T+I C R L+EA + + M G +
Sbjct: 511 EGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL 567
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
+ T N L+ R + + M G S + N
Sbjct: 568 PNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTN 613
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%)
Query: 44 IEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTA 103
+++A L +MV P+ V + LL+ ++K +KF LV S E+M+ G+ +Y+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 104 MIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTV 163
I+ C+ L A+ +L M+K PD+VT S L+NG+ + +I++A ++ +M +
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 164 LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAE 223
+ ++TLI+ EA+ M G D T +V C+ G + A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 224 YFMDHMSRMGLDPSTSAFDCIINS 247
++ M + + F+ II+S
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDS 267
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 121/236 (51%), Gaps = 2/236 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLK-PNEVTYGALLNGLSKHSKFGLV 82
L PN +N L+ HC G+I AF +++EM G+ PN +TY L++ L HS+
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 83 SSTLERM-RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
E M G+ +++ MI+G C+ +E A +LD M K NP+V +S L+N
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
GF + GKI AK+ ++ KT L L+ + Y+TL+ +C+ EA+ M S +
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
D T NV++ GR +EA +D G+ + ++ I+N+ +G+ KA
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKA 427
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 111/222 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T+N +I+G C G +E A ++LD M +G PN Y AL+NG K K T
Sbjct: 266 PDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQT 325
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ ++ G+++ + YT +++ C+N +EA+ LL +M + D +T++V++ G
Sbjct: 326 FDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSS 385
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G+ A +++ + + LN Y ++ C L++A+ +VM+ G H T
Sbjct: 386 EGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHAT 445
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
N LV C SG + + R+GL P ++ ++ S
Sbjct: 446 WNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVES 487
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 114/228 (50%), Gaps = 1/228 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVS-HGLKPNEVTYGALLNGLSKHSKFGLVSS 84
PN ITY+TL+D + +EA L ++M+S G+ P+ VT+ ++NG + +
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L+ M+ NG +Y+A+++G CK ++EA D++ K + D V ++ L+N F
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC 349
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
R G+ + A +++ +M + + + Y+ ++ +EAL G +
Sbjct: 350 RNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKG 409
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+ +++ C +G L++A F+ MS G+ P + ++ ++ SG
Sbjct: 410 SYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESG 457
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ + Y TL++ C G +EA +LL EM + + + +TY +L GLS + L
Sbjct: 337 DTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQML 396
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
++ GV + SY +++ LC N LE+AV L M + I P T++ L+ +
Sbjct: 397 DQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCES 456
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNL 184
G ++ + L+ + ++ + CK R L
Sbjct: 457 GYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKL 494
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 97/204 (47%), Gaps = 4/204 (1%)
Query: 58 GLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEA 117
G N TY LL+ L +H KF V + L +M+ R + ++ ++ L ++
Sbjct: 84 GFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKV 143
Query: 118 VHLLDDM-LKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTV-LVLNNILYSTLI 175
+ + + + + A + P + S +N + +G++N +++++ + L N +++ L+
Sbjct: 144 MEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILV 203
Query: 176 YNYCKMRNLKEALNTYAVMNHSG-HVSDHFTCNVLVATFCRSGRLKEA-EYFMDHMSRMG 233
++CK ++ A M SG + T + L+ R KEA E F D +S+ G
Sbjct: 204 KHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEG 263
Query: 234 LDPSTSAFDCIINSYGNSGDALKA 257
+ P F+ +IN + +G+ +A
Sbjct: 264 ISPDPVTFNVMINGFCRAGEVERA 287
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 64/130 (49%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +TYN ++ G S+G EEA ++LD+ S G+ N+ +Y +LN L + + L
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL 431
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
M G+ H ++ ++ LC++ E V +L L+ + P ++ ++ +
Sbjct: 432 SVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKE 491
Query: 147 GKINNAKEIM 156
K+ + E++
Sbjct: 492 RKLVHVFELL 501
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 117/235 (49%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P + YNT+ID C+ N+ +A L EM + G++PN VTY +L+ L + ++ S
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L M + ++++A+ID K L EA L D+M+K SI+PD+ T+S LINGF
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+++ AK + M N + Y+TLI +CK + + E + + M+ G V + T
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
L+ F ++ A+ M G+ P + +++ N+G A +
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 119/227 (52%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TYN+LI C+ G +A RLL +M+ + PN VT+ AL++ K K
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M + +Y+++I+G C + L+EA H+ + M+ P+VVT++ LI GF +
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 408
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A +++ E+ +M + LV N + Y+TLI+ + + R A + M G + D T
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
++L+ C +G+++ A +++ R ++P ++ +I +G
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 121/258 (46%), Gaps = 35/258 (13%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ T+NTLI G EA L+D MV G +P+ VTYG ++NGL K L S
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 86 LERMRMNGVRVGHISYTAMIDGLCK--------------------------NRLLE---- 115
L++M + G + Y +ID LC N L+
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 116 -----EAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNIL 170
+A LL DM++ INP+VVTFS LI+ F++ GK+ A+++ +M K + +
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 171 YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMS 230
YS+LI +C L EA + + +M + T N L+ FC++ R+ E MS
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 231 RMGLDPSTSAFDCIINSY 248
+ GL +T + +I+ +
Sbjct: 424 QRGLVGNTVTYTTLIHGF 441
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 103/197 (52%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S + PN +TYNTLI G C ++E L EM GL N VTY L++G + +
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
++M +GV ++Y+ ++DGLC N +E A+ + + + ++ + PD+ T++++I
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G +AGK+ + ++ C + + N + Y+T++ +C+ +EA + M G +
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL 568
Query: 201 SDHFTCNVLVATFCRSG 217
D T N L+ R G
Sbjct: 569 PDSGTYNTLIRAHLRDG 585
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 119/231 (51%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N TY+ LI+ C + + A +L +M+ G +P+ VT +LLNG ++ S +
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+M G + ++ +I GL ++ EAV L+D M+ PD+VT+ +++NG +
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G I+ A ++ KM + + ++Y+T+I C +N+ +ALN + M++ G + T
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
N L+ C GR +A + M ++P+ F +I+++ G ++A
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 115/227 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +T++ LID +G + EA +L DEM+ + P+ TY +L+NG H +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E M ++Y +I G CK + ++E + L +M + + + VT++ LI+GF +
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A + +NA+ + +M ++ + + YS L+ C ++ AL + + S D +T
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT 503
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
N+++ C++G++++ +S G+ P+ + +++ + G
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 550
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 113/223 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T N+L++G C I +A L+ +MV G +P+ T+ L++GL +H++ +
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVAL 208
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++RM + G + ++Y +++GLCK ++ A+ LL M + I P VV ++ +I+
Sbjct: 209 VDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN 268
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+N+A + +M + N + Y++LI C +A + M + T
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
+ L+ F + G+L EAE D M + +DP + +IN +
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 109/228 (47%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TY++LI+G C ++EA + + M+S PN VTY L+ G K +
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M G+ ++YT +I G + R + A + M+ + PD++T+S+L++G
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK+ A + + ++ + + Y+ +I CK +++ + + ++ G + T
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 538
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
+++ FCR G +EA+ M G P + ++ +I ++ GD
Sbjct: 539 YTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 109/218 (50%), Gaps = 3/218 (1%)
Query: 44 IEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTA 103
+++A L +MV P+ V + LL+ ++K +KF LV S E+M+ G+ +Y+
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 104 MIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTV 163
+I+ C+ L A+ +L M+K PD+VT + L+NGF +I++A ++ +M +
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 164 LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAE 223
++ ++TLI+ + EA+ M G D T ++V C+ G + A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 224 YFMDHMSRMGLDPSTSAFDCIINS---YGNSGDALKAF 258
+ M + ++P ++ II++ Y N DAL F
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S +LP+ +TY+ L+DG C+ G +E A + + + ++P+ TY ++ G+ K K
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ + GV+ ++YT M+ G C+ L EEA L +M + PD T++ LI
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 141 NGFLRAGKINNAKEIMCKM 159
LR G + E++ +M
Sbjct: 579 RAHLRDGDKAASAELIREM 597
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 111 NRL----LEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVL 166
NRL L++AV+L DM+K+ P +V FS L++ + K + + +M +
Sbjct: 55 NRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH 114
Query: 167 NNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFM 226
N YS LI +C+ L AL A M G+ D T N L+ FC R+ +A +
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 227 DHMSRMGLDPSTSAFDCII 245
M MG P + F+ +I
Sbjct: 175 GQMVEMGYQPDSFTFNTLI 193
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 116/236 (49%), Gaps = 3/236 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ T+NTLI G +G + EA L+D MV +G +P+ VTY +++NG+ + L
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L +M V+ +Y+ +ID LC++ ++ A+ L +M I VVT++ L+ G +
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AGK N+ ++ M +V N I ++ L+ + K L+EA Y M G + T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY---GNSGDALKAF 258
N L+ +C RL EA +D M R P F +I Y D +K F
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 118/228 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN ITYNTL+DG+C + + EA +LD MV + P+ VT+ +L+ G +
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ G+ ++Y+ ++ G C++ ++ A L +M+ + PDV+T+ +L++G
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK+ A EI + K+ + L ++Y+T+I CK +++A N + + G + T
Sbjct: 451 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 510
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
V+++ C+ G L EA + M G P+ ++ +I ++ GD
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 114/232 (49%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
+TYN+L+ G C G + LL +MVS + PN +T+ LL+ K K + +
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
M G+ I+Y ++DG C L EA ++LD M++ +PD+VTF+ LI G+ +
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
+++ ++ + K LV N + YS L+ +C+ +K A + M G + D T +
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
L+ C +G+L++A + + + +D + II G A+ L
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 123/268 (45%), Gaps = 35/268 (13%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TYN++++G C G+ A LL +M +K + TY +++ L + S
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M G++ ++Y +++ GLCK + LL DM+ I P+V+TF+VL++ F++
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVM----------- 194
GK+ A E+ +M + N I Y+TL+ YC L EA N +M
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 195 ------------------------NHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMS 230
+ G V++ T ++LV FC+SG++K AE M
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 231 RMGLDPSTSAFDCIINSYGNSGDALKAF 258
G+ P + +++ ++G KA
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 107/221 (48%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T+ +LI G+C +++ ++ + GL N VTY L+ G + K L
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M +GV ++Y ++DGLC N LE+A+ + +D+ K+ ++ +V ++ +I G +
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK+ +A + C + + N + Y+ +I CK +L EA M G+ + T
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
N L+ R G L + ++ M G S+ +I+
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 103/187 (55%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+ N +TY+ L+ G C G I+ A L EMVSHG+ P+ +TYG LL+GL + K
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
E ++ + + +G + YT +I+G+CK +E+A +L + + P+V+T++V+I+G
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G ++ A ++ KM + N+ Y+TLI + + +L + M G +D
Sbjct: 519 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADA 578
Query: 204 FTCNVLV 210
+ +++
Sbjct: 579 SSIKMVI 585
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 109/248 (43%), Gaps = 35/248 (14%)
Query: 45 EEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGV---------- 94
++A L EM+ P+ V + + +++ +F LV +++ +NG+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 95 ---------------------RVGHISYTAMIDGLCKNRLLE----EAVHLLDDMLKASI 129
++G+ T + L K LE EAV L+D M++
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 130 NPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALN 189
PDVVT++ ++NG R+G + A +++ KM + + + YST+I + C+ + A++
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 190 TYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYG 249
+ M G S T N LV C++G+ + + M + P+ F+ +++ +
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 250 NSGDALKA 257
G +A
Sbjct: 310 KEGKLQEA 317
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
+ Y T+I+G C G +E+A+ L + G+KPN +TY +++GL K + L +
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
M +G +Y +I ++ L + L+++M + D + ++I+ L A K
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY +I G C KG++ EA LL +M G PN+ TY L+ + +
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 86 LERMRMNGVRVGHISYTAMIDGL 108
+E M+ G S +ID L
Sbjct: 566 IEEMKSCGFSADASSIKMVIDML 588
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 126/243 (51%), Gaps = 8/243 (3%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F P+ +T ++LI+G C + +A L+ +M G +P+ V Y +++G K GL
Sbjct: 133 FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG---SCKIGL 189
Query: 82 VSSTLE---RMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSV 138
V+ +E RM +GVR ++Y +++ GLC + +A L+ DM+ I P+V+TF+
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 139 LINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
+I+ F++ GK + A ++ +M + + + Y++LI C + EA +M G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 199 HVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG--DALK 256
+ D T N L+ FC+S R+ E M++ GL T ++ II Y +G DA +
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 257 AFF 259
F
Sbjct: 370 EIF 372
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 117/224 (52%), Gaps = 5/224 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ + YNT+IDG C G + +A L D M G++ + VTY +L+ GL ++ +
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M M + I++TA+ID K EA+ L ++M + ++PDV T++ LING
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G+++ AK+++ M + + + Y+TLI +CK + + E + M G V D T
Sbjct: 292 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT 351
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYG 249
N ++ + ++GR A+ + SRM P+ + ++ YG
Sbjct: 352 YNTIIQGYFQAGRPDAAQ---EIFSRMDSRPNIRTYSILL--YG 390
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 115/226 (50%), Gaps = 3/226 (1%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+++PN IT+ +ID +G EA +L +EM + P+ TY +L+NGL H +
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
L+ M G ++Y +I+G CK++ ++E L +M + + D +T++ +I G
Sbjct: 299 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 358
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+ +AG+ + A+EI +M N YS L+Y C +++AL + M S D
Sbjct: 359 YFQAGRPDAAQEIFSRMDSRP---NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
T N+++ C+ G +++A +S GL P ++ +I+ +
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 107/222 (48%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
+YN +I+ C A ++ +M+ G +P+ VT +L+NG + ++ + +M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
G R + Y +IDG CK L+ +AV L D M + + D VT++ L+ G +G+
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
++A +M M +V N I ++ +I + K EA+ Y M D FT N L
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS 251
+ C GR+ EA+ +D M G P ++ +IN + S
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 3/222 (1%)
Query: 40 SKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHI 99
S N+EE L +M+ P+ V + +L+ ++K + LV S M + G+
Sbjct: 46 SSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLY 105
Query: 100 SYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKM 159
SY +I+ LC+ A+ ++ M+K PDVVT S LINGF + ++ +A +++ KM
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 160 YKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRL 219
+ + ++Y+T+I CK+ + +A+ + M G +D T N LVA C SGR
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 220 KEAEYFMDHMSRMGLDPSTSAFDCIINSY---GNSGDALKAF 258
+A M M + P+ F +I+ + G +A+K +
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 267
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 90/174 (51%), Gaps = 3/174 (1%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
LP+ +TYNTLI+G C ++E +L EM GL + +TY ++ G + +
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 370
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
RM R +Y+ ++ GLC N +E+A+ L ++M K+ I D+ T++++I+G
Sbjct: 371 IFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMC 427
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
+ G + +A ++ + L + + Y+T+I +C+ R ++ Y M G
Sbjct: 428 KIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 105/222 (47%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
LP+ + ++ ++ N + L M G+ + +Y ++N L + S+F + S
Sbjct: 66 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
+ +M G ++ +++I+G C+ + +A+ L+ M + PDVV ++ +I+G
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ G +N+A E+ +M + + + + Y++L+ C +A M V +
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
T ++ F + G+ EA + M+R +DP ++ +IN
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 122/234 (52%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
LLP+C+ Y T+IDG+C+ G ++AF+ ++ G P+ T L+ S+
Sbjct: 404 LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAE 463
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
S M+ G+++ ++Y ++ G K L + L+D+M A I+PDV T+++LI+
Sbjct: 464 SVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSM 523
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G I+ A EI+ ++ + V + + ++ +I + K + +EA + M D
Sbjct: 524 VVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDV 583
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
TC+ L+ +C++ R+++A + + GL P ++ +I+ Y + GD KA
Sbjct: 584 VTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKA 637
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 3/226 (1%)
Query: 35 IDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGV 94
IDG C G EEA +L+ S L+PN Y + L+ + S+ + + G+
Sbjct: 348 IDGFCKVGKPEEAIKLIH---SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGL 404
Query: 95 RVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKE 154
+ YT MIDG C ++A +LK+ P + T ++LI R G I++A+
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAES 464
Query: 155 IMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFC 214
+ M L L+ + Y+ L++ Y K L + M +G D T N+L+ +
Sbjct: 465 VFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMV 524
Query: 215 RSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
G + EA + + R G PST AF +I + GD +AF L
Sbjct: 525 VRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFIL 570
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +TYN L+ G+ + + F L+DEM S G+ P+ TY L++ + + +
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+ G +++T +I G K +EA L M + PDVVT S L++G+ +A
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
++ A + K+ L + +LY+TLI+ YC + ++++A +M G + + T
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 207 NVLV 210
+ LV
Sbjct: 657 HALV 660
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 110/234 (47%), Gaps = 3/234 (1%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N + I +CS G ++ + LL M +G++P+ V + ++ L K +S L
Sbjct: 270 NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL 329
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
++++ G+ +S +++IDG CK EEA+ L+ + P++ +S ++
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSFLSNICST 386
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G + A I ++++ L+ + + Y+T+I YC + +A + + SG+ T
Sbjct: 387 GDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTS 446
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+L+ R G + +AE +M GL ++ +++ YG + K F L
Sbjct: 447 TILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL 500
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 82/153 (53%), Gaps = 6/153 (3%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG---LV 82
P+ TYN LI +G I+EA ++ E++ G P+ + + ++ G SK F ++
Sbjct: 511 PDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFIL 570
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ +RM + ++ +A++ G CK + +E+A+ L + +L A + PDVV ++ LI+G
Sbjct: 571 WFYMADLRM---KPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLI 175
+ G I A E++ M + ++ N + L+
Sbjct: 628 YCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 100/230 (43%), Gaps = 5/230 (2%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
++ LID + + A +L ++ G+ P+ +LL + + L +E M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
G + + I C + ++ LL M I PD+V F+V I+ +AG +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH-FTCNV 208
A ++ K+ + +++ S++I +CK+ +EA+ + HS + + F +
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIK----LIHSFRLRPNIFVYSS 378
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
++ C +G + A + +GL P + +I+ Y N G KAF
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGL 73
L P+ + YNTLI G+CS G+IE+A L+ MV G+ PNE T+ AL+ GL
Sbjct: 614 LKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 122/234 (52%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
LLP+C+ Y T+IDG+C+ G ++AF+ ++ G P+ T L+ S+
Sbjct: 404 LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAE 463
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
S M+ G+++ ++Y ++ G K L + L+D+M A I+PDV T+++LI+
Sbjct: 464 SVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSM 523
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G I+ A EI+ ++ + V + + ++ +I + K + +EA + M D
Sbjct: 524 VVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDV 583
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
TC+ L+ +C++ R+++A + + GL P ++ +I+ Y + GD KA
Sbjct: 584 VTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKA 637
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 3/226 (1%)
Query: 35 IDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGV 94
IDG C G EEA +L+ S L+PN Y + L+ + S+ + + G+
Sbjct: 348 IDGFCKVGKPEEAIKLIH---SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGL 404
Query: 95 RVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKE 154
+ YT MIDG C ++A +LK+ P + T ++LI R G I++A+
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAES 464
Query: 155 IMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFC 214
+ M L L+ + Y+ L++ Y K L + M +G D T N+L+ +
Sbjct: 465 VFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMV 524
Query: 215 RSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
G + EA + + R G PST AF +I + GD +AF L
Sbjct: 525 VRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFIL 570
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 92/184 (50%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +TYN L+ G+ + + F L+DEM S G+ P+ TY L++ + + +
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+ G +++T +I G K +EA L M + PDVVT S L++G+ +A
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
++ A + K+ L + +LY+TLI+ YC + ++++A +M G + + T
Sbjct: 597 QRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Query: 207 NVLV 210
+ LV
Sbjct: 657 HALV 660
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 110/234 (47%), Gaps = 3/234 (1%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N + I +CS G ++ + LL M +G++P+ V + ++ L K +S L
Sbjct: 270 NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVL 329
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
++++ G+ +S +++IDG CK EEA+ L+ + P++ +S ++
Sbjct: 330 FKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSFLSNICST 386
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G + A I ++++ L+ + + Y+T+I YC + +A + + SG+ T
Sbjct: 387 GDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTS 446
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+L+ R G + +AE +M GL ++ +++ YG + K F L
Sbjct: 447 TILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFEL 500
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 82/153 (53%), Gaps = 6/153 (3%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG---LV 82
P+ TYN LI +G I+EA ++ E++ G P+ + + ++ G SK F ++
Sbjct: 511 PDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFIL 570
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ +RM + ++ +A++ G CK + +E+A+ L + +L A + PDVV ++ LI+G
Sbjct: 571 WFYMADLRM---KPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLI 175
+ G I A E++ M + ++ N + L+
Sbjct: 628 YCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 100/230 (43%), Gaps = 5/230 (2%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
++ LID + + A +L ++ G+ P+ +LL + + L +E M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
G + + I C + ++ LL M I PD+V F+V I+ +AG +
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH-FTCNV 208
A ++ K+ + +++ S++I +CK+ +EA+ + HS + + F +
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIK----LIHSFRLRPNIFVYSS 378
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
++ C +G + A + +GL P + +I+ Y N G KAF
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGL 73
L P+ + YNTLI G+CS G+IE+A L+ MV G+ PNE T+ AL+ GL
Sbjct: 614 LKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 121/231 (52%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ + YNT+IDG C ++++A L EM + G++P+ TY +L++ L + ++ S L
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
M + ++++A+ID K L EA L D+M+K SI+PD+ T+S LINGF
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
+++ AK + M N + YSTLI +CK + ++E + + M+ G V + T
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
L+ F ++ A+ M +G+ P+ ++ +++ +G KA
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 126/263 (47%), Gaps = 35/263 (13%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ T+ TLI G EA L+D+MV G +P+ VTYG ++NGL K L S
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAV--------------------------- 118
L++M + + Y +IDGLCK + +++A+
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 119 --------HLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNIL 170
LL DM++ INP+VVTFS LI+ F++ GK+ A+++ +M K + +
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Query: 171 YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMS 230
YS+LI +C L EA + + +M + T + L+ FC++ R++E MS
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 231 RMGLDPSTSAFDCIINSYGNSGD 253
+ GL +T + +I+ + + D
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQARD 448
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 118/227 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TY++LI C+ G +A RLL +M+ + PN VT+ AL++ K K
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M + +Y+++I+G C + L+EA H+ + M+ P+VVT+S LI GF +
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A ++ E+ +M + LV N + Y+TLI+ + + R+ A + M G + T
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
N+L+ C++G+L +A +++ R ++P ++ +I +G
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 120/232 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +T++ LID +G + EA +L DEM+ + P+ TY +L+NG H +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E M ++Y+ +I G CK + +EE + L +M + + + VT++ LI+GF +
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A +NA+ + +M + N + Y+ L+ CK L +A+ + + S D +T
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
N+++ C++G++++ ++S G+ P+ A++ +I+ + G +A
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEA 557
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 121/228 (53%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TY+ I+ C + + A +L +M+ G +P+ VT +LLNG + + +++M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
G + ++T +I GL + EAV L+D M++ PD+VT+ ++NG + G I
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
+ A ++ KM K + + ++Y+T+I CK +++ +ALN + M++ G D FT + L
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
++ C GR +A + M ++P+ F +I+++ G ++A
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 111/226 (49%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S + PN +TY+TLI G C +EE L EM GL N VTY L++G +
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
++M GV ++Y ++DGLCKN L +A+ + + + ++++ PD+ T++++I
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G +AGK+ + E+ C + + N I Y+T+I +C+ + +EA + M G +
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
+ T N L+ R G + + + M G S + N
Sbjct: 571 PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 114/223 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T ++L++G+C I +A L+D+MV G KP+ T+ L++GL H+K +
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+++M G + ++Y +++GLCK ++ A+ LL M K I DVV ++ +I+G +
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+++A + +M + + YS+LI C +A + M + T
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
+ L+ F + G+L EAE D M + +DP + +IN +
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 3/218 (1%)
Query: 44 IEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTA 103
+++A L +MV P+ V + LL+ ++K +KF LV S E+M+ G+ +Y+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 104 MIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTV 163
I+ C+ L A+ +L M+K PD+VT S L+NG+ + +I++A ++ +M +
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 164 LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAE 223
+ ++TLI+ EA+ M G D T +V C+ G + A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 224 YFMDHMSRMGLDPSTSAFDCIIN---SYGNSGDALKAF 258
+ M + ++ ++ II+ Y + DAL F
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 121/238 (50%), Gaps = 4/238 (1%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F + PN YN LI GHC GN+ EA LL EM S L P+ TY L+NGL +
Sbjct: 333 FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAE 392
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
+ ++M+ + +Y ++I G CK +E+A+ L +M + + P+++TFS LI+
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG-HV 200
G+ I A + +M +V + + Y+ LI + K N+KEAL Y+ M +G H
Sbjct: 453 GYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHP 512
Query: 201 SDH-FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+DH F C LV F + GRL A F ++ + F C+I +G L+A
Sbjct: 513 NDHTFAC--LVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRA 568
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 124/238 (52%), Gaps = 3/238 (1%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+LPN TY+ +IDG+C GN+ +A+ L E++ L PN V +G L++G K +
Sbjct: 265 VLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTAR 324
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
S M GV Y +I G CK+ + EAV LL +M +++PDV T+++LING
Sbjct: 325 SLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGL 384
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
++ A + KM + ++ Y++LI+ YCK N+++AL+ + M SG +
Sbjct: 385 CIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNI 444
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY---GNSGDALKAF 258
T + L+ +C +K A M+ G+ P + +I+++ N +AL+ +
Sbjct: 445 ITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLY 502
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 118/241 (48%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S L+P+ Y L +G + +LLDEM S G+KPN Y + L + +K
Sbjct: 192 SRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKME 251
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
E M+ +GV +Y+AMIDG CK + +A L ++L A + P+VV F L+
Sbjct: 252 EAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLV 311
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+GF +A ++ A+ + M K + N +Y+ LI+ +CK N+ EA+ + M
Sbjct: 312 DGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLS 371
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
D FT +L+ C ++ EA M + PS++ ++ +I+ Y + +A L
Sbjct: 372 PDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDL 431
Query: 261 C 261
C
Sbjct: 432 C 432
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 4/223 (1%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S NL P+ TY LI+G C + + EA RL +M + + P+ TY +L++G K
Sbjct: 367 SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNME 426
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
M +GV I+++ +IDG C R ++ A+ L +M I PDVVT++ LI
Sbjct: 427 QALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+ + + A + M + + N+ ++ L+ + K L A++ Y N
Sbjct: 487 DAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSC 546
Query: 201 SDH--FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAF 241
+H FTC L+ C++G + A F M G+ P ++
Sbjct: 547 WNHVGFTC--LIEGLCQNGYILRASRFFSDMRSCGITPDICSY 587
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
++P+ +TY LID H + N++EA RL +M+ G+ PN+ T+ L++G K + +
Sbjct: 475 IVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAI 534
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ H+ +T +I+GLC+N + A DM I PD+ ++ ++ G
Sbjct: 535 DFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGH 594
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNY 178
L+ +I + + C M KT +L N+L + L+ +
Sbjct: 595 LQEKRITDTMMLQCDMIKTG-ILPNLLVNQLLARF 628
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 99/214 (46%)
Query: 33 TLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMN 92
++++G + + + M+S GL P+ Y L K + L+ M
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 93 GVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNA 152
G++ YT I LC++ +EEA + + M K + P++ T+S +I+G+ + G + A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 153 KEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVAT 212
+ ++ L+ N +++ TL+ +CK R L A + + M G + + N L+
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHG 348
Query: 213 FCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
C+SG + EA + M + L P + +IN
Sbjct: 349 HCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 3/228 (1%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
++ LI G EEA + EM P+ ++LNGL + +F V + M
Sbjct: 134 VFSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSILNGLVRRRRFDSVWVDYQLM 190
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
G+ Y + K L + LLD+M I P+V +++ I R K+
Sbjct: 191 ISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A+++ M K ++ N YS +I YCK N+++A Y + + + + L
Sbjct: 251 EEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTL 310
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
V FC++ L A HM + G+DP+ ++C+I+ + SG+ L+A
Sbjct: 311 VDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEA 358
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 121/235 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +T+N+LID +G + EA +L DEM+ + PN VTY +L+NG H +
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M ++Y +I+G CK + + + + L DM + + + VT++ LI+GF +
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A +NA+ + +M + N + Y+TL+ CK L++A+ + + S D +T
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
N++ C++G++++ +S G+ P A++ +I+ + G +A+ L
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 126/231 (54%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N TYN +I+ C + + A +L +M+ G P+ VT +LLNG ++ + +
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
++M G + +++T ++ GL ++ EAV L++ M+ PD+VT+ +ING +
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G+ + A ++ KM K + + ++YST+I + CK R++ +ALN + M++ G D FT
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ L++ C GR +A + M ++P+ F+ +I+++ G ++A
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 119/223 (53%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T N+L++G C I EA L+D+MV G +P+ VT+ L++GL +H+K +
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ERM + G + ++Y A+I+GLCK + A++LL+ M K I DVV +S +I+ +
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+++A + +M + + YS+LI C +A + M + T
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
N L+ F + G+L EAE D M + +DP+ ++ +IN +
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 127/263 (48%), Gaps = 35/263 (13%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T+ TL+ G EA L++ MV G +P+ VTYGA++NGL K + L +
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHL------------------------- 120
L +M + + Y+ +ID LCK R +++A++L
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 121 ----------LDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNIL 170
L DML+ INP+VVTF+ LI+ F + GK+ A+++ +M + + N +
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 171 YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMS 230
Y++LI +C L EA + +M + D T N L+ FC++ ++ + MS
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 231 RMGLDPSTSAFDCIINSYGNSGD 253
R GL +T + +I+ + + D
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASD 430
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 111/220 (50%), Gaps = 2/220 (0%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S + LP+ +TYNTLI+G C + + L +M GL N VTY L++G + S
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
++M +GV ++Y ++DGLCKN LE+A+ + + + K+ + PD+ T++++
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G +AGK+ + ++ C + + + I Y+T+I +CK +EA + M G +
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL 552
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMS--RMGLDPST 238
D T N L+ R G + + M R D ST
Sbjct: 553 PDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAST 592
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 113/217 (52%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TY++LI C+ G +A RLL +M+ + PN VT+ +L++ +K K
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M + ++Y ++I+G C + L+EA + M+ PDVVT++ LINGF +
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A K+ + E+ M + LV N + Y+TLI+ + + + A + M G + T
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMT 452
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFD 242
N L+ C++G+L++A +++ + ++P ++
Sbjct: 453 YNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN 489
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 120/231 (51%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ + Y+T+ID C ++++A L EM + G++P+ TY +L++ L + ++ S L
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
M + +++ ++ID K L EA L D+M++ SI+P++VT++ LINGF
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
+++ A++I M + + + Y+TLI +CK + + + + + M+ G V + T
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
L+ F ++ A+ M G+ P+ ++ +++ +G KA
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 3/219 (1%)
Query: 43 NIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYT 102
++EA L EMV P+ V + LL+ ++K KF LV S E+M + GV +Y
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 103 AMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKT 162
MI+ LC+ L A+ +L M+K P +VT + L+NGF +I+ A ++ +M +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 163 VLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEA 222
+ + ++TL++ + EA+ M G D T ++ C+ G A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 223 EYFMDHMSRMGLDPSTSAFDCIINS---YGNSGDALKAF 258
++ M + ++ + +I+S Y + DAL F
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF 263
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 4/174 (2%)
Query: 91 MNGVRVGHISYTAMIDGLCKNRLL----EEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+ G+ +SY + L +N LL +EAV L +M+K+ P +V FS L++ +
Sbjct: 19 LRGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKM 78
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
K + KM + N Y+ +I C+ L AL M G+ T
Sbjct: 79 KKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTL 138
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
N L+ FC R+ EA +D M MG P T F +++ A +A L
Sbjct: 139 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 116/232 (50%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ + +NT+ID C ++++A L EM + G++PN VTY +L++ L + ++ S L
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
M + +++ A+ID K EA L DDM+K SI+PD+ T++ L+NGF
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
+++ AK++ M + + Y+TLI +CK + +++ + M+H G V D T
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
L+ G A+ M G+ P + +++ N+G KA
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 119/236 (50%), Gaps = 3/236 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY +++G C +G+ + A LL++M + ++ + V + +++ L K+ +
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M G+R ++Y+++I LC +A LL DM++ INP++VTF+ LI+ F++
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK A+++ M K + + Y++L+ +C L +A + M D T
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD---ALKAF 258
N L+ FC+S R+++ MS GL T + +I + GD A K F
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 121/228 (53%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TYN LI+ C + I A LL +M+ G +P+ VT +LLNG + + +++M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
G R I++T +I GL + EAV L+D M++ P++VT+ V++NG + G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
+ A ++ KM + + ++++T+I + CK R++ +ALN + M G + T + L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
++ C GR +A + M ++P+ F+ +I+++ G ++A
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 99/197 (50%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S + P+ +TYNTLI G C +E+ L EM GL + VTY L+ GL
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
++M +GV ++Y+ ++DGLC N LE+A+ + D M K+ I D+ ++ +I
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G +AGK+++ ++ C + + N + Y+T+I C R L+EA M G +
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
Query: 201 SDHFTCNVLVATFCRSG 217
+ T N L+ R G
Sbjct: 573 PNSGTYNTLIRAHLRDG 589
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 116/223 (52%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T ++L++G+C I +A L+D+MV G +P+ +T+ L++GL H+K +
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 212
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++RM G + ++Y +++GLCK + A++LL+ M A I DVV F+ +I+ +
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+++A + +M + N + YS+LI C +A + M + T
Sbjct: 273 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 332
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
N L+ F + G+ EAE D M + +DP ++ ++N +
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 114/228 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TYN+L++G C +++A ++ + MVS P+ VTY L+ G K + +
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M G+ ++YT +I GL + + A + M+ + PD++T+S+L++G
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK+ A E+ M K+ + L+ +Y+T+I CK + + + + ++ G + T
Sbjct: 483 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 542
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
N +++ C L+EA + M G P++ ++ +I ++ GD
Sbjct: 543 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY++LI CS G +A +LL +M+ + PN VT+ AL++ K KF
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M + +Y ++++G C + L++A + + M+ PDVVT++ LI GF +
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+ ++ + E+ +M LV + + Y+TLI + A + M G D T
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSR 231
++L+ C +G+L++A D+M +
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQK 498
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 3/219 (1%)
Query: 43 NIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYT 102
+++A L MV P+ V + LL+ ++K KF +V S E+M+ + G +Y
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 103 AMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKT 162
+I+ C+ + A+ LL M+K P +VT S L+NG+ +I++A ++ +M +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 163 VLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEA 222
+ I ++TLI+ EA+ M G + T V+V C+ G A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 223 EYFMDHMSRMGLDPSTSAFDCIINS---YGNSGDALKAF 258
++ M ++ F+ II+S Y + DAL F
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY+ L+DG C+ G +E+A + D M +K + Y ++ G+ K K
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ + GV+ ++Y MI GLC RLL+EA LL M + P+ T++ LI LR
Sbjct: 528 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLR 587
Query: 146 AGKINNAKEIMCKM 159
G + E++ +M
Sbjct: 588 DGDKAASAELIREM 601
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TYNT+I G CSK ++EA+ LL +M G PN TY L+ H + G +++
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA---HLRDGDKAAS 594
Query: 86 LERMR-MNGVR-VGHISYTAMIDGLCKNRLLEEA 117
E +R M R VG S ++ + + L+++
Sbjct: 595 AELIREMRSCRFVGDASTIGLVANMLHDGRLDKS 628
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 118/236 (50%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+ P+ ITYN LI+G+C G + AF LL M KPN T+ L+ GL + K
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
L+RM NG+ +SY +IDGLC+ + A LL M I PD +TF+ +IN
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
F + GK + A + M + + L+ + +TLI CK+ ++AL + ++
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTT 545
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
+ NV++ + ++KE + ++++GL PS + +++ SGD +F
Sbjct: 546 PHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 115/229 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN ++Y+ LI G C G +EEAF L D+M G +P+ TY L+ L +
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M G + +YT +IDGLC++ +EEA + M+K I P V+T++ LING+ +
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G++ A E++ M K N ++ L+ C++ +A++ M +G D +
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDA 254
NVL+ CR G + A + M+ ++P F IIN++ G A
Sbjct: 444 YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 110/235 (46%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TY LI C +G I++AF L DEM+ G KPN TY L++GL + K +
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+M + + I+Y A+I+G CK+ + A LL M K + P+V TF+ L+ G R
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK A ++ +M L + + Y+ LI C+ ++ A + MN D T
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
++ FC+ G+ A F+ M R G+ +I+ G A F+
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFI 533
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 124/235 (52%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ ++YN LIDG C +G++ A++LL M ++P+ +T+ A++N K K + S
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ L M G+ + ++ T +IDG+CK +A+ +L+ ++K I + +V+++
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDML 556
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ K+ ++ K+ K LV + + Y+TL+ + ++ + +M SG + +
Sbjct: 557 SKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV 616
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
+ +++ C+ GR++EAE + M G+ P+ + ++ Y N+G +A
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRAL 671
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 1/222 (0%)
Query: 32 NTLIDGHCSKGNIEEAFRLLDEMVSH-GLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
+L+ G C N+ +A ++ D M PN V+Y L++GL + + ++M
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
G + +YT +I LC L+++A +L D+M+ P+V T++VLI+G R GKI
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIE 353
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLV 210
A + KM K + + I Y+ LI YCK + A VM + T N L+
Sbjct: 354 EANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM 413
Query: 211 ATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
CR G+ +A + + M GL P +++ +I+ G
Sbjct: 414 EGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREG 455
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 23/239 (9%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
+ N ++D ++E +L ++ GL P+ VTY L++GL + LE M
Sbjct: 548 SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+++G YT +I+GLC+ +EEA LL M + ++P+ VT++V++ G++ GK+
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYC-----------------KMRNL-KEALNTY 191
+ A E + M + LN+ +YS+L+ + +R E +N
Sbjct: 668 DRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINEL 727
Query: 192 --AVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
V G +S C LV C+ GR E+ + ++ G+ A D I+ SY
Sbjct: 728 ISVVEQLGGCISG--LCIFLVTRLCKEGRTDESNDLVQNVLERGVFLE-KAMDIIMESY 783
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 88/205 (42%), Gaps = 1/205 (0%)
Query: 58 GLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEA 117
G + N Y +LL L+K L T RM +G VG I Y +++ LCKN E A
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 118 VHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVL-VLNNILYSTLIY 176
+ +LK D + L+ GF R + +A ++ M K V N++ YS LI+
Sbjct: 215 EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIH 274
Query: 177 NYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDP 236
C++ L+EA M G T VL+ C G + +A D M G P
Sbjct: 275 GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKP 334
Query: 237 STSAFDCIINSYGNSGDALKAFFLC 261
+ + +I+ G +A +C
Sbjct: 335 NVHTYTVLIDGLCRDGKIEEANGVC 359
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 118/237 (49%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+P+ ++YN LI G + G++E AF DEMV G+ P TY L++GL +K
Sbjct: 323 LVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAE 382
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ +R G+ + ++Y +I+G C++ ++A L D+M+ I P T++ LI
Sbjct: 383 ILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVL 442
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
R K A E+ K+ + + ++ +TL+ +C + N+ A + M+ D
Sbjct: 443 CRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDD 502
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
T N L+ C G+ +EA M M R G+ P +++ +I+ Y GD AF +
Sbjct: 503 VTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMV 559
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 3/239 (1%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F + P +TYNTL+ G +G IE A ++ EM S G +P+ TY +L+ + G
Sbjct: 254 FGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNE---GR 310
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
S L M+ G+ +SY +I G N LE A D+M+K + P T++ LI+
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
G KI A+ ++ ++ + +VL+++ Y+ LI YC+ + K+A + M G
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
FT L+ CR + +EA+ + + G+ P + +++ + G+ +AF L
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSL 489
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 116/224 (51%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +TYN LI+G+C G+ ++AF L DEM++ G++P + TY +L+ L + +K
Sbjct: 396 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
E++ G++ + ++DG C ++ A LL +M SINPD VT++ L+ G
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 515
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
GK A+E+M +M + + ++I Y+TLI Y K + K A M G T
Sbjct: 516 GKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTY 575
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGN 250
N L+ ++ + AE + M G+ P+ S+F +I + N
Sbjct: 576 NALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 83/150 (55%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ + NTL+DGHC+ GN++ AF LL EM + P++VTY L+ GL KF
Sbjct: 465 PDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAREL 524
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M+ G++ HISY +I G K + A + D+ML NP ++T++ L+ G +
Sbjct: 525 MGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSK 584
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLI 175
+ A+E++ +M +V N+ + ++I
Sbjct: 585 NQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 3/217 (1%)
Query: 44 IEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTA 103
IE A+ +M +K N T+ ++N L K K L M + G++ ++Y
Sbjct: 206 IENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNT 265
Query: 104 MIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTV 163
++ G +E A ++ +M PD+ T++ +++ G+ A E++ +M +
Sbjct: 266 LVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIG 322
Query: 164 LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAE 223
LV +++ Y+ LI +L+ A M G V +T N L+ +++ AE
Sbjct: 323 LVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAE 382
Query: 224 YFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+ + G+ + ++ +IN Y GDA KAF L
Sbjct: 383 ILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ I+YNTLI G+ KG+ + AF + DEM+S G P +TY ALL GLSK+ + L
Sbjct: 535 PDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEEL 594
Query: 86 LERMRMNGVRVGHISYTAMIDGL 108
L M+ G+ S+ ++I+ +
Sbjct: 595 LREMKSEGIVPNDSSFCSVIEAM 617
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 61/146 (41%)
Query: 109 CKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNN 168
C+ R+++EA+ M + P T + ++ R +I NA MY+ + N
Sbjct: 166 CQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNV 225
Query: 169 ILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDH 228
++ +I CK LK+A +M G T N LV F GR++ A +
Sbjct: 226 YTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISE 285
Query: 229 MSRMGLDPSTSAFDCIINSYGNSGDA 254
M G P ++ I++ N G A
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEGRA 311
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 119/223 (53%), Gaps = 1/223 (0%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
P+ T+N LI G+ ++ +E A +LD M+ +G+ P+ TY +LLNGL K SKF V
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME 517
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
T + M G ++ +++ LC+ R L+EA+ LL++M S+NPD VTF LI+GF
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNI-LYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G ++ A + KM + V ++ Y+ +I+ + + N+ A + M D
Sbjct: 578 KNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDG 637
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
+T ++V FC++G + F+ M G PS + +IN
Sbjct: 638 YTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVIN 680
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 117/237 (49%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+P+ TY +LIDG C +G A L +E + G+KPN + Y L+ GLS +
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
M G+ ++ +++GLCK + +A L+ M+ PD+ TF++LI+G+
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
K+ NA EI+ M + + Y++L+ CK ++ + TY M G +
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
FT N+L+ + CR +L EA ++ M ++P F +I+ + +GD A+ L
Sbjct: 532 FTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 109/225 (48%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+LPN TYN I G C +G ++ A R++ ++ G KP+ +TY L+ GL K+SKF
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAE 306
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L +M G+ +Y +I G CK +++ A ++ D + PD T+ LI+G
Sbjct: 307 VYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL 366
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
G+ N A + + + N ILY+TLI + EA M+ G + +
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEV 426
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
T N+LV C+ G + +A+ + M G P F+ +I+ Y
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ ITYN LI G C +EA L +MV+ GL+P+ TY L+ G K L
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ NG +Y ++IDGLC A+ L ++ L I P+V+ ++ LI G
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSN 403
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G I A ++ +M + L+ ++ L+ CKM + +A VM G+ D FT
Sbjct: 404 QGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
N+L+ + +++ A +D M G+DP ++ ++N
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 109/237 (45%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ P+ ++ + C A RLL+ M S G + N V Y ++ G + +
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+M +GV + ++ ++ LCK ++E LLD ++K + P++ T+++ I G
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G+++ A ++ + + + I Y+ LIY CK +EA M + G D
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+T N L+A +C+ G ++ AE + G P + +I+ + G+ +A L
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 97/227 (42%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P +YN ++ G ++A ++ M G+ P+ ++ + K S+
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRL 168
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L M G + ++Y ++ G + E L ML + ++ + TF+ L+ +
Sbjct: 169 LNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCK 228
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G + ++++ K+ K ++ N Y+ I C+ L A+ + G D T
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVIT 288
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
N L+ C++ + +EAE ++ M GL+P + ++ +I Y G
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 84/213 (39%), Gaps = 36/213 (16%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TYN+L++G C E+ MV G PN T+ LL L ++ K
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKN----------RLLEEA-------------VH--- 119
LE M+ V +++ +IDG CKN R +EEA +H
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFT 613
Query: 120 ----------LLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNI 169
L +M+ + PD T+ ++++GF + G +N + + +M + + +
Sbjct: 614 EKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLT 673
Query: 170 LYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+I C + EA M G V +
Sbjct: 674 TLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 99/240 (41%), Gaps = 7/240 (2%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL--- 86
TY ++I+ G E +L +M + N + G + + + + G V +
Sbjct: 42 TYRSVIEKLGYYGKFEAMEEVLVDMREN--VGNHMLEGVYVGAMKNYGRKGKVQEAVNVF 99
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
ERM SY A++ L + ++A + M I PDV +F++ + F +
Sbjct: 100 ERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKT 159
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
+ + A ++ M +N + Y T++ + + E + M SG T
Sbjct: 160 SRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTF 219
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL--CLIK 264
N L+ C+ G +KE E +D + + G+ P+ ++ I G+ A + CLI+
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 114/230 (49%), Gaps = 16/230 (6%)
Query: 39 CSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGH 98
CS G E+AF ++ EM+ G P+ TY +LN L SK L E M+ G+
Sbjct: 459 CSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV 518
Query: 99 ISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCK 158
+YT M+D CK L+E+A ++M + P+VVT++ LI+ +L+A K++ A E+
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFET 578
Query: 159 MYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD---HF----------- 204
M + N + YS LI +CK +++A + M S V D +F
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 205 --TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
T L+ FC+S R++EA +D MS G +P+ +D +I+ G
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 113/238 (47%), Gaps = 16/238 (6%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMV----------------SHGLKPNEVTYGA 68
LPN +TY+ LIDGHC G +E+A ++ + M + +PN VTYGA
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 69 LLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKAS 128
LL+G K + L+ M M G I Y A+IDGLCK L+EA + +M +
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 129 INPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEAL 188
+ T+S LI+ + + + + A +++ KM + N ++Y+ +I CK+ EA
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 189 NTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
+M G + T ++ F G+++ ++ M G+ P+ + +I+
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY L+DG C +EEA +LLD M G +PN++ Y AL++GL K K
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M +G +Y+++ID K + + A +L ML+ S P+VV ++ +I+G +
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK + A ++M M + N + Y+ +I + + ++ L M G ++ T
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
VL+ C++G L A ++ M + T+ + +I +
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 116/280 (41%), Gaps = 51/280 (18%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+ + TY ++D C G IE+A + +EM G PN VTY AL++ K K +
Sbjct: 514 LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYAN 573
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKA---------------- 127
E M G ++Y+A+IDG CK +E+A + + M +
Sbjct: 574 ELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDN 633
Query: 128 SINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEA 187
S P+VVT+ L++GF ++ ++ A++++ M N I+Y LI CK+ L EA
Sbjct: 634 SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693
Query: 188 LNTYAVMNHSGHVSDHFT------------------------------CNVLVAT----- 212
M+ G + +T NV++ T
Sbjct: 694 QEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDG 753
Query: 213 FCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
C+ G+ EA M M G P+ + +I+ +G G
Sbjct: 754 LCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIG 793
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 4/212 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY +IDG G IE LL+ M S G+ PN VTY L++ K+ + +
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
LE M+ Y +I+G N+ E++ LLD++ + P + + +LI+ ++
Sbjct: 837 LEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIK 894
Query: 146 AGKINNAKEIMCKM--YKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
A ++ A ++ ++ + LV + Y++LI + C ++ A ++ M G + +
Sbjct: 895 AQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEM 954
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLD 235
+ L+ R+ ++ EA +D +S M +
Sbjct: 955 QSFCSLIKGLFRNSKISEALLLLDFISHMEIQ 986
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 107/230 (46%), Gaps = 6/230 (2%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
LPN +TY+TL+ G +K + R+L+ M+ G P+ + +L++
Sbjct: 334 LPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYK 393
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNR------LLEEAVHLLDDMLKASINPDVVTFSV 138
L++M G G++ Y +I +C ++ LL+ A +ML A + + + S
Sbjct: 394 LLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSS 453
Query: 139 LINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
AGK A ++ +M + + YS ++ C ++ A + M G
Sbjct: 454 FTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 513
Query: 199 HVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
V+D +T ++V +FC++G +++A + + M +G P+ + +I++Y
Sbjct: 514 LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 116/291 (39%), Gaps = 70/291 (24%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLK------------------------- 60
PN I Y+ LIDG C G ++EA + EM HG
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731
Query: 61 ----------PNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCK 110
PN V Y +++GL K K ++ M G + ++YTAMIDG
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 791
Query: 111 NRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKM----------- 159
+E + LL+ M + P+ VT+ VLI+ + G ++ A ++ +M
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 851
Query: 160 YKTVL------------VLNNI----------LYSTLIYNYCKMRNLKEALNTY-AVMNH 196
Y+ V+ +L+ I +Y LI N K + L+ AL V
Sbjct: 852 YRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATF 911
Query: 197 SGHVSDH-FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
S + D+ T N L+ + C + +++ A M++ G+ P +F +I
Sbjct: 912 SATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIK 962
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 104/238 (43%), Gaps = 6/238 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSK------F 79
P+ +N+L+ +C+ G+ A++LL +MV G P V Y L+ +
Sbjct: 370 PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLL 429
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
L M GV + I+ ++ LC E+A ++ +M+ PD T+S +
Sbjct: 430 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 489
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
+N A K+ A + +M + LV + Y+ ++ ++CK +++A + M G
Sbjct: 490 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ T L+ + ++ ++ A + M G P+ + +I+ + +G KA
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 99/211 (46%), Gaps = 6/211 (2%)
Query: 25 LPNCITYNTLIDGHCSKGN------IEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSK 78
+P + YN LI C + ++ A + EM++ G+ N++ + L K
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463
Query: 79 FGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSV 138
+ S + M G +Y+ +++ LC +E A L ++M + + DV T+++
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 139 LINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
+++ F +AG I A++ +M + N + Y+ LI+ Y K + + A + M G
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 199 HVSDHFTCNVLVATFCRSGRLKEAEYFMDHM 229
+ + T + L+ C++G++++A + M
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 109/302 (36%), Gaps = 73/302 (24%)
Query: 32 NTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS-----STL 86
N L+ HC G+ A L + +P+ TY L+ K + S +L
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 87 ERMRMNGV----------RVGH-----------------ISYTAMIDGLCKNRLLEEAVH 119
+RM+G +VG + YT +I GLC+ L EEA+
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMD 323
Query: 120 LLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYC 179
L+ M S P+VVT+S L+ G L ++ K ++ M + ++++L++ YC
Sbjct: 324 FLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 383
Query: 180 KMRNLKEALNTYAVMNHSGHVSDHFTCNVLVAT--------------------------- 212
+ A M GH+ + N+L+ +
Sbjct: 384 TSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAG 443
Query: 213 --------------FCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
C +G+ ++A + M G P TS + ++N N+ AF
Sbjct: 444 VVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAF 503
Query: 259 FL 260
L
Sbjct: 504 LL 505
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 120/233 (51%), Gaps = 1/233 (0%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSH-GLKPNEVTYGALLNGLSKHSKF 79
SF + P+ T + +++ +C GN+++A E S GL+ N VTY +L+NG +
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDV 277
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
++ L M GV ++YT++I G CK L+EEA H+ + + + + D + VL
Sbjct: 278 EGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVL 337
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
++G+ R G+I +A + M + + N + ++LI YCK L EA ++ MN
Sbjct: 338 MDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSL 397
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
DH T N LV +CR+G + EA D M + + P+ ++ ++ Y G
Sbjct: 398 KPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIG 450
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 116/228 (50%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
Y L+DG+C G I +A R+ D M+ G++ N +L+NG K + RM
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
++ H +Y ++DG C+ ++EA+ L D M + + P V+T+++L+ G+ R G +
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLV 210
+ + M K + + I STL+ K+ + EA+ + + G ++D T NV++
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI 513
Query: 211 ATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
+ C+ ++ EA+ +D+++ P+ + + + Y G+ +AF
Sbjct: 514 SGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAF 561
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 118/243 (48%), Gaps = 4/243 (1%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
++L P+ TYNTL+DG+C G ++EA +L D+M + P +TY LL G S+ F
Sbjct: 395 WSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHD 454
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
V S + M GV IS + +++ L K EA+ L +++L + D +T +V+I+
Sbjct: 455 VLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMIS 514
Query: 142 GFLRAGKINNAKEIM--CKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
G + K+N AKEI+ +++ + Y L + Y K+ NLKEA M G
Sbjct: 515 GLCKMEKVNEAKEILDNVNIFRCKPAVQT--YQALSHGYYKVGNLKEAFAVKEYMERKGI 572
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFF 259
N L++ + L + + + GL P+ + + +I + N G KA+
Sbjct: 573 FPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYA 632
Query: 260 LCL 262
C
Sbjct: 633 TCF 635
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHG-LKPNEVTYGALLNGLSKHSKFGLV 82
L+PN I YN I G C G +E+A +L +++S P+E TY L++G +
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ + M + G+ ++Y A+I GLCK ++ A LL + + I P+ +T++ LI+G
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834
Query: 143 FLRAGKINNAKEIMCKMYKTVLV 165
+++G + A + KM + LV
Sbjct: 835 LVKSGNVAEAMRLKEKMIEKGLV 857
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 112/253 (44%), Gaps = 24/253 (9%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F P TY L G+ GN++EAF + + M G+ P Y L++G K+
Sbjct: 535 FRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNK 594
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
V+ + +R G+ +Y A+I G C ++++A +M++ I +V S + N
Sbjct: 595 VADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIAN 654
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNIL-YSTLIYNYCKMRNLKEALNTY--------- 191
R KI+ A L+L I+ + L+ Y ++ EA T
Sbjct: 655 SLFRLDKIDEA----------CLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAE 704
Query: 192 AVMNHSGH---VSDHFTCNVLVATFCRSGRLKEA-EYFMDHMSRMGLDPSTSAFDCIINS 247
+V N + V ++ NV +A C++G+L++A + F D +S P + +I+
Sbjct: 705 SVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHG 764
Query: 248 YGNSGDALKAFFL 260
+GD KAF L
Sbjct: 765 CAIAGDINKAFTL 777
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 101/250 (40%), Gaps = 39/250 (15%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNE-------------------- 63
L P TY LI G C+ G I++A+ EM+ G+ N
Sbjct: 607 LTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEAC 666
Query: 64 ------VTYGALLNGLSKHSKFGLVSST-----------LERMRMNGVRV-GHISYTAMI 105
V + LL G +F S+T +E + V +I Y I
Sbjct: 667 LLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAI 726
Query: 106 DGLCKNRLLEEAVHLLDDMLKAS-INPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVL 164
GLCK LE+A L D+L + PD T+++LI+G AG IN A + +M +
Sbjct: 727 AGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGI 786
Query: 165 VLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEY 224
+ N + Y+ LI CK+ N+ A + G + T N L+ +SG + EA
Sbjct: 787 IPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMR 846
Query: 225 FMDHMSRMGL 234
+ M GL
Sbjct: 847 LKEKMIEKGL 856
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S +P+ TY LI G G+I +AF L DEM G+ PN VTY AL+ GL K
Sbjct: 748 SDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVD 807
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
L ++ G+ I+Y +IDGL K+ + EA+ L + M++ L+
Sbjct: 808 RAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG----------LV 857
Query: 141 NGFLRAGKINNAKEIM 156
G + G ++ KE++
Sbjct: 858 RGSDKQGDVDIPKEVV 873
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 122/238 (51%), Gaps = 3/238 (1%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
F+ P ++ ++ + KG ++ A + D M ++G P+ ++ +LL+ L + +
Sbjct: 150 EFSFSPT--VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENF 207
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKA-SINPDVVTFSVL 139
+ ++M V + + +++ C++ +++A+ + + + +VVT++ L
Sbjct: 208 VALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSL 267
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
ING+ G + ++ M + + N + Y++LI YCK ++EA + + ++
Sbjct: 268 INGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKL 327
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
V+D VL+ +CR+G++++A D+M +G+ +T+ + +IN Y SG ++A
Sbjct: 328 VADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEA 385
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 118/228 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY +++G C +G+I+ AF LL++M + ++ + V + +++ L K+ +
Sbjct: 148 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 207
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M G+R ++Y+++I LC +A LL DM++ INP++VTF+ LI+ F++
Sbjct: 208 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 267
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK A+++ M K + + Y++LI +C L +A + M D T
Sbjct: 268 EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 327
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
N L+ FC+S R+++ MS GL T + +I + GD
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 120/247 (48%), Gaps = 9/247 (3%)
Query: 21 SFNLL---------PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLN 71
+FNLL + + +NT+ID C ++++A L EM + G++PN VTY +L++
Sbjct: 169 AFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228
Query: 72 GLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINP 131
L + ++ S L M + +++ A+ID K EA L DDM+K SI+P
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288
Query: 132 DVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTY 191
D+ T++ LINGF +++ AK++ M + Y+TLI +CK + +++ +
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348
Query: 192 AVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS 251
M+H G V D T L+ G A+ M G+ P + +++ N+
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Query: 252 GDALKAF 258
G KA
Sbjct: 409 GKLEKAL 415
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 123/231 (53%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N TYN LI+ C + I A LL +M+ G +P+ VT +LLNG + + +
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
++M G R I++T +I GL + EAV L+D M++ P++VT+ V++NG +
Sbjct: 104 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 163
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G I+ A ++ KM + + ++++T+I + CK R++ +ALN + M G + T
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ L++ C GR +A + M ++P+ F+ +I+++ G ++A
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 116/223 (52%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T ++L++G+C I +A L+D+MV G +P+ +T+ L++GL H+K +
Sbjct: 78 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 137
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++RM G + ++Y +++GLCK ++ A +LL+ M A I DVV F+ +I+ +
Sbjct: 138 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 197
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+++A + +M + N + YS+LI C +A + M + T
Sbjct: 198 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 257
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
N L+ F + G+ EAE D M + +DP ++ +IN +
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 98/197 (49%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S + P+ TYNTLI G C +E+ L EM GL + VTY L+ GL
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
++M +GV ++Y+ ++DGLC N LE+A+ + D M K+ I D+ ++ +I
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G +AGK+++ ++ C + + N + Y+T+I C R L+EA M G +
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 497
Query: 201 SDHFTCNVLVATFCRSG 217
D T N L+ R G
Sbjct: 498 PDSGTYNTLIRAHLRDG 514
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 112/228 (49%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TYN+LI+G C +++A ++ + MVS P+ TY L+ G K + +
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M G+ ++YT +I GL + + A + M+ + PD++T+S+L++G
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK+ A E+ M K+ + L+ +Y+T+I CK + + + + ++ G + T
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 467
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
N +++ C L+EA + M G P + ++ +I ++ GD
Sbjct: 468 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 104/206 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY++LI CS G +A +LL +M+ + PN VT+ AL++ K KF
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M + +Y ++I+G C + L++A + + M+ PD+ T++ LI GF +
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+ ++ + E+ +M LV + + Y+TLI + A + M G D T
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 397
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSR 231
++L+ C +G+L++A D+M +
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQK 423
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY+ L+DG C+ G +E+A + D M +K + Y ++ G+ K K
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ + GV+ ++Y MI GLC RLL+EA LL M + PD T++ LI LR
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512
Query: 146 AGKINNAKEIMCKM 159
G + E++ +M
Sbjct: 513 DGDKAASAELIREM 526
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 3/208 (1%)
Query: 54 MVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRL 113
MV P+ + LL+ ++K KF LV S E+M+ G+ +Y +I+ C+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 114 LEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYST 173
+ A+ LL M+K P +VT S L+NG+ +I++A ++ +M + + I ++T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 174 LIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMG 233
LI+ EA+ M G + T V+V C+ G + A ++ M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 234 LDPSTSAFDCIINS---YGNSGDALKAF 258
++ F+ II+S Y + DAL F
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLF 208
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 73/161 (45%)
Query: 100 SYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKM 159
+ ++ + K + + + L + M + I+ ++ T+++LIN F R +I+ A ++ KM
Sbjct: 12 EFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 71
Query: 160 YKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRL 219
K + + S+L+ YC + + +A+ M G+ D T L+ +
Sbjct: 72 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 220 KEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
EA +D M + G P+ + ++N GD AF L
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 172
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TYNT+I G CSK ++EA+ LL +M G P+ TY L+ H + G +++
Sbjct: 463 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA---HLRDGDKAAS 519
Query: 86 LERMR-MNGVR-VGHISYTAMIDGLCKNRLLEEA 117
E +R M R VG S ++ + + L+++
Sbjct: 520 AELIREMRSCRFVGDASTIGLVANMLHDGRLDKS 553
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 39/260 (15%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSK-------- 75
L P IT+NTLI+G C +G + EA L+++MV GL + VTYG ++NG+ K
Sbjct: 222 LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 281
Query: 76 ---------HSKFGLV--SSTLER----------------MRMNGVRVGHISYTAMIDGL 108
H K +V S+ ++R M G+ +Y MIDG
Sbjct: 282 NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 341
Query: 109 CKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNN 168
C +A LL DM++ INPDV+TF+ LI+ ++ GK+ A+++ +M + +
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 169 ILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDH 228
+ Y+++IY +CK +A + + +M D T N ++ +CR+ R+ E +
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 229 MSRMGLDPSTSAFDCIINSY 248
+SR GL +T+ ++ +I+ +
Sbjct: 458 ISRRGLVANTTTYNTLIHGF 477
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 125/256 (48%), Gaps = 39/256 (15%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG----L 81
P+ + Y+ +ID C G+ +A L EM+ G+ PN TY +++G ++ L
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 82 VSSTLER------MRMNG-----VRVGH--------------------ISYTAMIDGLCK 110
+ +ER + N V+ G ++Y +MI G CK
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 111 NRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNIL 170
+ ++A H+ D M +PDVVTF+ +I+ + RA +++ +++ ++ + LV N
Sbjct: 414 HNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 171 YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMS 230
Y+TLI+ +C++ NL A + + M G D TCN+L+ FC + +L+EA + +
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 231 RMGLDPSTSAFDCIIN 246
+D T A++ II+
Sbjct: 530 MSKIDLDTVAYNIIIH 545
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 3/207 (1%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+ N TYNTLI G C N+ A L EM+SHG+ P+ +T LL G ++ K
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
E ++M+ + + ++Y +I G+CK ++EA L + + PDV T++V+I+GF
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
I++A + KM +N Y+TLI K + +++ + M +G D
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMS 230
FT +VA GRL ++ F D +S
Sbjct: 643 FTIK-MVADLITDGRLDKS--FSDMLS 666
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 112/238 (47%), Gaps = 15/238 (6%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAF---------------RLLDEMVSHGLKPNEVTYGALL 70
P+ +T+NTL+ G C + I EA L D+MV GL P +T+ L+
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLI 233
Query: 71 NGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASIN 130
NGL + ++ + +M G+ + ++Y +++G+CK + A++LL M + I
Sbjct: 234 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293
Query: 131 PDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNT 190
PDVV +S +I+ + G ++A+ + +M + + N Y+ +I +C +A
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 191 YAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
M D T N L++ + G+L EAE D M + P T ++ +I +
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 125/307 (40%), Gaps = 74/307 (24%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ PN TYN +IDG CS G +A RLL +M+ + P+ +T+ AL++ K K
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ M + ++Y +MI G CK+ ++A H+ D M +PDVVTF+ +I+ +
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVY 442
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLI---------------------------- 175
RA +++ +++ ++ + LV N Y+TLI
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 176 -------YNYCKMRNLKEALNTYAVMNHS------------------------------- 197
Y +C+ L+EAL + V+ S
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562
Query: 198 ----GHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
G D T NV+++ FC + +A M G +P S ++ +I +G+
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 622
Query: 254 ALKAFFL 260
K+ L
Sbjct: 623 IDKSIEL 629
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 110/222 (49%), Gaps = 4/222 (1%)
Query: 22 FNLL--PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF 79
F+L+ P+ +T+NT+ID +C ++E +LL E+ GL N TY L++G +
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
+ M +GV I+ ++ G C+N LEEA+ L + + + I+ D V ++++
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
I+G + K++ A ++ C + + + Y+ +I +C + +A + M +GH
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAF 241
D+ T N L+ ++G + ++ + M G S AF
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF--SGDAF 643
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 100/267 (37%), Gaps = 53/267 (19%)
Query: 43 NIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYT 102
++++A D MV V ++ + ++ + S +M + + + S+
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 103 AMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN--------------------- 141
+I C L ++ + K PDVVTF+ L++
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 142 GFLRA-----------------------------GKINNAKEIMCKMYKTVLVLNNILYS 172
GFL A G++ A ++ KM L ++ + Y
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 173 TLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRM 232
T++ CKM + K ALN + M + D + ++ C+ G +A+Y M
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 233 GLDPSTSAFDCIIN---SYGNSGDALK 256
G+ P+ ++C+I+ S+G DA +
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQR 352
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 117/237 (49%), Gaps = 3/237 (1%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
+PN +TYN LIDG+C G +E A ++ M +KPN VT ++ G+ +H +
Sbjct: 403 VPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
M GV+ ++Y +I C +E+A++ + ML+A +PD + LI+G
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ + ++A ++ K+ + L+ + Y+ LI +C N ++ M G D
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSI 582
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY---GNSGDALKAF 258
T N L++ F + + E M+ M GLDP+ + + +I++Y G +ALK F
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 16/233 (6%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
FN L +C+ N +I L+ +M ++P+ VT G L+N L K +
Sbjct: 296 PFNALLSCLGRNM---------DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVD 346
Query: 81 LVSSTLERMRM------NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDM-LKASINPDV 133
E+MR N ++ I + +IDGLCK L+EA LL M L+ P+
Sbjct: 347 EALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNA 406
Query: 134 VTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAV 193
VT++ LI+G+ RAGK+ AKE++ +M + + N + +T++ C+ L A+ +
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMD 466
Query: 194 MNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
M G + T L+ C +++A Y+ + M G P + +I+
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 1/219 (0%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N +TY TLI CS N+E+A ++M+ G P+ Y AL++GL + + +
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
E+++ G + ++Y +I C E+ +L DM K PD +T++ LI+ F +
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMN-HSGHVSDHFT 205
+ + +M +M + L Y +I YC + L EAL + M HS +
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCI 244
N+L+ F + G +A + M + P+ ++ +
Sbjct: 655 YNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 111/242 (45%), Gaps = 17/242 (7%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHG--LKPNEVTYGALLNGLSKHSKFG-- 80
+ N N ++D G +++AF++LDEM+ PN +T +L+ + K
Sbjct: 182 MKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEE 241
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ + + R +GV + T I LCKN A +L D++K + F+ L+
Sbjct: 242 KIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALL 301
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVM----NH 196
+ R I+ +++ KM + + + + LI CK R + EAL + M
Sbjct: 302 SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTD 361
Query: 197 SGHV--SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLD----PSTSAFDCIINSYGN 250
G+V +D N L+ C+ GRLKEAE + RM L+ P+ ++C+I+ Y
Sbjct: 362 DGNVIKADSIHFNTLIDGLCKVGRLKEAEEL---LVRMKLEERCVPNAVTYNCLIDGYCR 418
Query: 251 SG 252
+G
Sbjct: 419 AG 420
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 107/241 (44%), Gaps = 7/241 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN + I C A+ +L +++ + + ALL+ L ++ ++
Sbjct: 257 PNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKAS------INPDVVTFSVL 139
+ +M +R ++ +I+ LCK+R ++EA+ + + M I D + F+ L
Sbjct: 317 VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTL 376
Query: 140 INGFLRAGKINNAKEIMCKM-YKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
I+G + G++ A+E++ +M + V N + Y+ LI YC+ L+ A + M
Sbjct: 377 IDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE 436
Query: 199 HVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
+ T N +V CR L A F M + G+ + + +I++ + + KA
Sbjct: 437 IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 259 F 259
+
Sbjct: 497 Y 497
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHG-LKPNEVTYGALLNGLSKHSKFGLV 82
L P TY +ID +CS G ++EA +L +M H + PN V Y L+N SK FG
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASIN 130
S E M+M VR +Y A+ L + E + L+D+M++ +N
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEHLVN 719
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 117/237 (49%), Gaps = 3/237 (1%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
+PN +TYN LIDG+C G +E A ++ M +KPN VT ++ G+ +H +
Sbjct: 403 VPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
M GV+ ++Y +I C +E+A++ + ML+A +PD + LI+G
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ + ++A ++ K+ + L+ + Y+ LI +C N ++ M G D
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSI 582
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY---GNSGDALKAF 258
T N L++ F + + E M+ M GLDP+ + + +I++Y G +ALK F
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 16/233 (6%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
FN L +C+ N +I L+ +M ++P+ VT G L+N L K +
Sbjct: 296 PFNALLSCLGRNM---------DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVD 346
Query: 81 LVSSTLERMRM------NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDM-LKASINPDV 133
E+MR N ++ I + +IDGLCK L+EA LL M L+ P+
Sbjct: 347 EALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNA 406
Query: 134 VTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAV 193
VT++ LI+G+ RAGK+ AKE++ +M + + N + +T++ C+ L A+ +
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMD 466
Query: 194 MNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
M G + T L+ C +++A Y+ + M G P + +I+
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 1/219 (0%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N +TY TLI CS N+E+A ++M+ G P+ Y AL++GL + + +
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
E+++ G + ++Y +I C E+ +L DM K PD +T++ LI+ F +
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMN-HSGHVSDHFT 205
+ + +M +M + L Y +I YC + L EAL + M HS +
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCI 244
N+L+ F + G +A + M + P+ ++ +
Sbjct: 655 YNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 17/242 (7%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHG--LKPNEVTYGALLNGLSKHSKFG-- 80
+ N N ++D G +++AF++LDEM+ PN +T +L+ + K
Sbjct: 182 MKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEE 241
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ + + R +GV + T I LCKN A +L D++K + F+ L+
Sbjct: 242 KIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALL 301
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVM----NH 196
+ R I+ +++ KM + + + + LI CK R + EAL + M
Sbjct: 302 SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTD 361
Query: 197 SGHV--SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLD----PSTSAFDCIINSYGN 250
G+V +D N L+ C+ GRLKEAE + + RM L+ P+ ++C+I+ Y
Sbjct: 362 DGNVIKADSIHFNTLIDGLCKVGRLKEAE---ELLVRMKLEERCVPNAVTYNCLIDGYCR 418
Query: 251 SG 252
+G
Sbjct: 419 AG 420
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHG-LKPNEVTYGALLNGLSKHSKFGLV 82
L P TY +ID +CS G ++EA +L +M H + PN V Y L+N SK FG
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
S E M+M VR +Y A+ L + E + L+D+M++ S P+ +T +L+
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME 730
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 107/241 (44%), Gaps = 7/241 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN + I C A+ +L +++ + + ALL+ L ++ ++
Sbjct: 257 PNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKAS------INPDVVTFSVL 139
+ +M +R ++ +I+ LCK+R ++EA+ + + M I D + F+ L
Sbjct: 317 VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTL 376
Query: 140 INGFLRAGKINNAKEIMCKM-YKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
I+G + G++ A+E++ +M + V N + Y+ LI YC+ L+ A + M
Sbjct: 377 IDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE 436
Query: 199 HVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
+ T N +V CR L A F M + G+ + + +I++ + + KA
Sbjct: 437 IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 259 F 259
+
Sbjct: 497 Y 497
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 116/236 (49%), Gaps = 3/236 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TYN LIDG+C G +E A ++ M +KPN VT ++ G+ +H +
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M GV+ ++Y +I C +E+A++ + ML+A +PD + LI+G +
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+ ++A ++ K+ + L+ + Y+ LI +C N ++ M G D T
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSIT 583
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY---GNSGDALKAF 258
N L++ F + + E M+ M GLDP+ + + +I++Y G +ALK F
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 16/233 (6%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
FN L +C+ N +I L+ +M ++P+ VT G L+N L K +
Sbjct: 296 PFNALLSCLGRNM---------DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVD 346
Query: 81 LVSSTLERMRM------NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDM-LKASINPDV 133
E+MR N ++ I + +IDGLCK L+EA LL M L+ P+
Sbjct: 347 EALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNA 406
Query: 134 VTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAV 193
VT++ LI+G+ RAGK+ AKE++ +M + + N + +T++ C+ L A+ +
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMD 466
Query: 194 MNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
M G + T L+ C +++A Y+ + M G P + +I+
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 1/219 (0%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N +TY TLI CS N+E+A ++M+ G P+ Y AL++GL + + +
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
E+++ G + ++Y +I C E+ +L DM K PD +T++ LI+ F +
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMN-HSGHVSDHFT 205
+ + +M +M + L Y +I YC + L EAL + M HS +
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCI 244
N+L+ F + G +A + M + P+ ++ +
Sbjct: 655 YNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 113/246 (45%), Gaps = 25/246 (10%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHG--LKPNEVTYGALLNG------LSKH 76
+ N N ++D G +++AF++LDEM+ PN +T +L+ L++
Sbjct: 182 MKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEE 241
Query: 77 SKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTF 136
L+S R +GV + T I LCKN A +L D++K + F
Sbjct: 242 KIIALIS----RFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPF 297
Query: 137 SVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVM-- 194
+ L++ R I+ +++ KM + + + + LI CK R + EAL + M
Sbjct: 298 NALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRG 357
Query: 195 --NHSGHV--SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLD----PSTSAFDCIIN 246
G+V +D N L+ C+ GRLKEAE + + RM L+ P+ ++C+I+
Sbjct: 358 KRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAE---ELLVRMKLEERCAPNAVTYNCLID 414
Query: 247 SYGNSG 252
Y +G
Sbjct: 415 GYCRAG 420
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 26 PNCITYNTLIDGHCSKGNI---EEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
PN IT + ++ KG + E+ L+ SHG+ PN V ++ L K+++
Sbjct: 220 PNRITADIVLH-EVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAA 278
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
L + N + + A++ L +N + L+ M + I PDVVT +LIN
Sbjct: 279 WDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINT 338
Query: 143 FLRAGKINNAKEIMCKMYKT------VLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNH 196
++ +++ A E+ KM V+ ++I ++TLI CK+ LKEA M
Sbjct: 339 LCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKL 398
Query: 197 SGH-VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
+ T N L+ +CR+G+L+ A+ + M + P+ + I+
Sbjct: 399 EERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHG-LKPNEVTYGALLNGLSKHSKFGLV 82
L P TY +ID +CS G ++EA +L +M H + PN V Y L+N SK FG
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
S E M+M VR +Y A+ L + E + L+D+M++ S P+ +T +L+
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME 730
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 106/241 (43%), Gaps = 7/241 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN + I C A+ +L +++ + + ALL+ L ++ ++
Sbjct: 257 PNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKAS------INPDVVTFSVL 139
+ +M +R ++ +I+ LCK+R ++EA+ + + M I D + F+ L
Sbjct: 317 VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTL 376
Query: 140 INGFLRAGKINNAKEIMCKM-YKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
I+G + G++ A+E++ +M + N + Y+ LI YC+ L+ A + M
Sbjct: 377 IDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE 436
Query: 199 HVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
+ T N +V CR L A F M + G+ + + +I++ + + KA
Sbjct: 437 IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 259 F 259
+
Sbjct: 497 Y 497
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 39/260 (15%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSK-------- 75
L P IT+NTLI+G C +G + EA L+++MV GL + VTYG ++NG+ K
Sbjct: 222 LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 281
Query: 76 ---------HSKFGLV--SSTLER----------------MRMNGVRVGHISYTAMIDGL 108
H K +V S+ ++R M G+ +Y MIDG
Sbjct: 282 NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 341
Query: 109 CKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNN 168
C +A LL DM++ INPDV+TF+ LI+ ++ GK+ A+++ +M + +
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 169 ILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDH 228
+ Y+++IY +CK +A + + +M D T N ++ +CR+ R+ E +
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 229 MSRMGLDPSTSAFDCIINSY 248
+SR GL +T+ ++ +I+ +
Sbjct: 458 ISRRGLVANTTTYNTLIHGF 477
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 125/256 (48%), Gaps = 39/256 (15%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG----L 81
P+ + Y+ +ID C G+ +A L EM+ G+ PN TY +++G ++ L
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 82 VSSTLER------MRMNG-----VRVGH--------------------ISYTAMIDGLCK 110
+ +ER + N V+ G ++Y +MI G CK
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 111 NRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNIL 170
+ ++A H+ D M +PDVVTF+ +I+ + RA +++ +++ ++ + LV N
Sbjct: 414 HNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 171 YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMS 230
Y+TLI+ +C++ NL A + + M G D TCN+L+ FC + +L+EA + +
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 231 RMGLDPSTSAFDCIIN 246
+D T A++ II+
Sbjct: 530 MSKIDLDTVAYNIIIH 545
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 96/192 (50%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+ N TYNTLI G C N+ A L EM+SHG+ P+ +T LL G ++ K
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
E ++M+ + + ++Y +I G+CK ++EA L + + PDV T++V+I+GF
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
I++A + KM +N Y+TLI K + +++ + M +G D
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
Query: 204 FTCNVLVATFCR 215
FT + CR
Sbjct: 643 FTIKMAEEIICR 654
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 112/238 (47%), Gaps = 15/238 (6%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAF---------------RLLDEMVSHGLKPNEVTYGALL 70
P+ +T+NTL+ G C + I EA L D+MV GL P +T+ L+
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLI 233
Query: 71 NGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASIN 130
NGL + ++ + +M G+ + ++Y +++G+CK + A++LL M + I
Sbjct: 234 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293
Query: 131 PDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNT 190
PDVV +S +I+ + G ++A+ + +M + + N Y+ +I +C +A
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 191 YAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
M D T N L++ + G+L EAE D M + P T ++ +I +
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 125/307 (40%), Gaps = 74/307 (24%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ PN TYN +IDG CS G +A RLL +M+ + P+ +T+ AL++ K K
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ M + ++Y +MI G CK+ ++A H+ D M +PDVVTF+ +I+ +
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVY 442
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLI---------------------------- 175
RA +++ +++ ++ + LV N Y+TLI
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 176 -------YNYCKMRNLKEALNTYAVMNHS------------------------------- 197
Y +C+ L+EAL + V+ S
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562
Query: 198 ----GHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
G D T NV+++ FC + +A M G +P S ++ +I +G+
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 622
Query: 254 ALKAFFL 260
K+ L
Sbjct: 623 IDKSIEL 629
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 110/222 (49%), Gaps = 4/222 (1%)
Query: 22 FNLL--PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF 79
F+L+ P+ +T+NT+ID +C ++E +LL E+ GL N TY L++G +
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
+ M +GV I+ ++ G C+N LEEA+ L + + + I+ D V ++++
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
I+G + K++ A ++ C + + + Y+ +I +C + +A + M +GH
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAF 241
D+ T N L+ ++G + ++ + M G S AF
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF--SGDAF 643
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/267 (19%), Positives = 100/267 (37%), Gaps = 53/267 (19%)
Query: 43 NIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYT 102
++++A D MV V ++ + ++ + S +M + + + S+
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 103 AMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN--------------------- 141
+I C L ++ + K PDVVTF+ L++
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 142 GFLRA-----------------------------GKINNAKEIMCKMYKTVLVLNNILYS 172
GFL A G++ A ++ KM L ++ + Y
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 173 TLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRM 232
T++ CKM + K ALN + M + D + ++ C+ G +A+Y M
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 233 GLDPSTSAFDCIIN---SYGNSGDALK 256
G+ P+ ++C+I+ S+G DA +
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQR 352
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 117/231 (50%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
YN +IDG C G + +A++LL+EM + G +P VTYG++++GL+K + E
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ + + + Y+++IDG K ++EA +L+++++ + P++ T++ L++ ++A +I
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
N A M + N + Y LI CK+R +A + M G + +
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
++ ++G + EA D G P ++ ++ +I N A+ AF L
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSL 819
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 109/234 (46%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+P+ +Y+ LI G G E + L M G + Y +++G K K
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
LE M+ G ++Y ++IDGL K L+EA L ++ I +VV +S LI+GF
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGF 667
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G+I+ A I+ ++ + L N +++L+ K + EAL + M +
Sbjct: 668 GKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQ 727
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
T +L+ C+ + +A F M + G+ PST ++ +I+ +G+ +A
Sbjct: 728 VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 1/221 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P + TLI G +G ++ A LLDEM S L + V Y ++ K K +
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKF 260
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ NG++ ++YT+MI LCK L+EAV + + + K P ++ +I G+
Sbjct: 261 FHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGS 320
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AGK + A ++ + + + I Y+ ++ KM + EAL + M + T
Sbjct: 321 AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLST 379
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
N+L+ CR+G+L A D M + GL P+ + +++
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 102/223 (45%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L PN T N ++D C ++EA + +EM P+E+T+ +L++GL K +
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
E+M + R I YT++I + E+ + DM+ + +PD+ + ++
Sbjct: 468 KVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCM 527
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+AG+ + + ++ V + YS LI+ K E + M G V D
Sbjct: 528 FKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT 587
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
N+++ FC+ G++ +A ++ M G +P+ + +I+
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N + Y++LIDG G I+EA+ +L+E++ GL PN T+ +LL+ L K +
Sbjct: 656 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCF 715
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+ M+ ++Y +I+GLCK R +A +M K + P ++++ +I+G +A
Sbjct: 716 QSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKA 775
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G I A + + V ++ Y+ +I +A + + G + TC
Sbjct: 776 GNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTC 835
Query: 207 NVLVATFCRSGRLKEA 222
VL+ T ++ L++A
Sbjct: 836 VVLLDTLHKNDCLEQA 851
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 4/241 (1%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S +L + + YN ID G ++ A++ E+ ++GLKP+EVTY +++ L K ++
Sbjct: 231 SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLD 290
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
E + N +Y MI G +EA LL+ P V+ ++ ++
Sbjct: 291 EAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+ GK++ A ++ +M K N Y+ LI C+ L A M +G
Sbjct: 351 TCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLF 409
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG---DALKA 257
+ T N++V C+S +L EA + M P F +I+ G G DA K
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV 469
Query: 258 F 258
+
Sbjct: 470 Y 470
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 106/224 (47%), Gaps = 4/224 (1%)
Query: 39 CSKGN-IEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVG 97
C K N + E + ++ M +P Y L+ S + ++ + ++M+ G
Sbjct: 143 CVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPT 202
Query: 98 HISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMC 157
+T +I G K ++ A+ LLD+M +S++ D+V ++V I+ F + GK++ A +
Sbjct: 203 VHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 158 KMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSG 217
++ L + + Y+++I CK L EA+ + + + V + N ++ + +G
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG 322
Query: 218 RLKEAEYFMDHMSRMGLDPSTSAFDCIIN---SYGNSGDALKAF 258
+ EA ++ G PS A++CI+ G +ALK F
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVF 366
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 109/236 (46%), Gaps = 1/236 (0%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
+P+ I YN ++ G ++EA ++ +EM PN TY L++ L + K
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFE 398
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
+ M+ G+ + M+D LCK++ L+EA + ++M PD +TF LI+G
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ G++++A ++ KM + N+I+Y++LI N+ ++ Y M + D
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ 518
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
N + ++G ++ + + P ++ +I+ +G A + + L
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 1/237 (0%)
Query: 25 LPNCI-TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
LP+C +YN+L+ N + ++L EM G P+ T ++ G K +K
Sbjct: 94 LPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGY 153
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
++ MR R +YT +I + + L M + P V F+ LI GF
Sbjct: 154 DVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGF 213
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G++++A ++ +M + L + +LY+ I ++ K+ + A + + +G D
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
T ++ C++ RL EA +H+ + P T A++ +I YG++G +A+ L
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL 330
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 8/181 (4%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L PN T+N+L+D I EA M PN+VTYG L+NGL K KF
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ M+ G++ ISYT MI GL K + EA L D PD ++ +I G
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNN----ILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
+ +A + + + L ++N +L TL N C L++A AV+ +G
Sbjct: 808 SNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDC----LEQAAIVGAVLRETGK 863
Query: 200 V 200
Sbjct: 864 A 864
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 132/268 (49%), Gaps = 37/268 (13%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEM-VSHGL--KPNEVTYGALLNGLS---- 74
F P+ I+YN+LIDGHC G+I A +L+ + SHG KP+ V++ +L NG S
Sbjct: 85 FGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKM 144
Query: 75 ------------------------------KHSKFGLVSSTLERMRMNGVRVGHISYTAM 104
K + L + M+ + + +++T +
Sbjct: 145 LDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCL 204
Query: 105 IDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVL 164
IDG CK LE AV L +M + ++ +VVT++ LI+GF + G++ A+E+ +M + +
Sbjct: 205 IDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRV 264
Query: 165 VLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEY 224
N+++Y+T+I + + + A+ A M + G D V+++ C +G+LKEA
Sbjct: 265 EPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATE 324
Query: 225 FMDHMSRMGLDPSTSAFDCIINSYGNSG 252
++ M + L P F ++N+Y SG
Sbjct: 325 IVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 1/240 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY+T ID C G ++ A + M L PN VT+ L++G K + S
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ MR + + ++YTA+IDG CK ++ A + M++ + P+ + ++ +I+GF +
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G +NA + + KM + L+ Y +I C LKEA M S V D
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVI 340
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF-FLCLIK 264
++ + +SGR+K A + G +P A +I+ +G +A + C+ K
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK 400
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L PN +T+ LIDG+C G++E A L EM + N VTY AL++G K +
Sbjct: 194 LSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAE 253
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
RM + V + YT +IDG + + A+ L ML + D+ + V+I+G
Sbjct: 254 EMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGL 313
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
GK+ A EI+ M K+ LV + ++++T++ Y K +K A+N Y + G D
Sbjct: 314 CGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDV 373
Query: 204 FTCNVLVATFCRSGRLKEA 222
+ ++ ++G+L EA
Sbjct: 374 VALSTMIDGIAKNGQLHEA 392
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 117/296 (39%), Gaps = 65/296 (21%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N +TY LIDG C KG ++ A + MV ++PN + Y +++G + L
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDM---------------------- 124
+M G+R+ +Y +I GLC N L+EA +++DM
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Query: 125 --LKASIN-----------PDVVTFSVLINGFLRAGKINNAKEIMC-------------- 157
+KA++N PDVV S +I+G + G+++ A C
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLID 411
Query: 158 ----------------KMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
K+ + LV + +Y++ I CK NL +A M G +
Sbjct: 412 ALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLL 471
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
D L+ G + EA D M G+ P ++ FD +I +Y G+ A
Sbjct: 472 DLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAA 527
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 108/223 (48%), Gaps = 9/223 (4%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF--G 80
+L+P+ + + T+++ + G ++ A + +++ G +P+ V +++G++K+ +
Sbjct: 333 DLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+V +E+ + YT +ID LCK E L + +A + PD ++ I
Sbjct: 393 IVYFCIEK-------ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWI 445
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G + G + +A ++ +M + L+L+ + Y+TLIY + EA + M +SG
Sbjct: 446 AGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGIS 505
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDC 243
D ++L+ + + G + A + M R GL + S DC
Sbjct: 506 PDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVSDADC 548
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 14/241 (5%)
Query: 25 LPNCITYN----TLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
LP+ T N LI+ +C ++ + L +VS G P+ ++ ++++ + K +
Sbjct: 18 LPDPFTCNKHIHQLINSNCGILSL----KFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVK 73
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKAS----INPDVVTF 136
+ M G ISY ++IDG C+N + A +L+ L+AS PD+V+F
Sbjct: 74 FAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLES-LRASHGFICKPDIVSF 132
Query: 137 SVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNH 196
+ L NGF + ++ M M K N + YST I +CK L+ AL ++ M
Sbjct: 133 NSLFNGFSKMKMLDEVFVYMGVMLKCC-SPNVVTYSTWIDTFCKSGELQLALKSFHSMKR 191
Query: 197 SGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALK 256
+ T L+ +C++G L+ A M R+ + + + +I+ + G+ +
Sbjct: 192 DALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQR 251
Query: 257 A 257
A
Sbjct: 252 A 252
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 117/226 (51%), Gaps = 8/226 (3%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSK----FGLV 82
+ + +++ ID + G++ A + M+ G+ PN VTY L+ GL + + FG+
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
L+R G+ ++Y+++IDG CK L L +DM+K PDVV + VL++G
Sbjct: 415 GQILKR----GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+ G + +A KM + LN +++++LI +C++ EAL + +M G D
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
T ++ GRL+EA + M +MGL+P A+ +I+++
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 115/238 (48%), Gaps = 3/238 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +T+ TLI+G C +G ++ AF L M G++P+ + Y L++G K G+
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ GV++ + +++ ID K+ L A + ML I+P+VVT+++LI G +
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G+I A + ++ K + + + YS+LI +CK NL+ Y M G+ D
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY---GNSGDALKAFFL 260
VLV + G + A F M + + F+ +I+ + +ALK F L
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 124/308 (40%), Gaps = 76/308 (24%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY++LIDG C GN+ F L ++M+ G P+ V YG L++GLS K GL+
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS---KQGLMLHA 480
Query: 86 LE---RMRMNGVRVGHISYTAMIDGLCK-NRL---------------------------- 113
+ +M +R+ + + ++IDG C+ NR
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Query: 114 ------LEEAVHLLDDMLKASINPDVVTFSVLINGF------------------------ 143
LEEA+ L M K + PD + + LI+ F
Sbjct: 541 SIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISAD 600
Query: 144 -----------LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYA 192
+ +I +A + + + + + + Y+T+I YC +R L EA +
Sbjct: 601 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 660
Query: 193 VMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
++ + + T +L+ C++ + A M+ G P+ + C+++ + S
Sbjct: 661 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 720
Query: 253 DALKAFFL 260
D +F L
Sbjct: 721 DIEGSFKL 728
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 92/177 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TYNT+I G+CS ++EA R+ + + PN VT L++ L K++
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M G + ++Y ++D K+ +E + L ++M + I+P +V++S++I+G +
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
G+++ A I + L+ + + Y+ LI YCK+ L EA Y M +G D
Sbjct: 754 RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 1/229 (0%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
++ N ++ G S IE A RLL ++ G PN VT+ L+NG K + +
Sbjct: 253 VSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
M G+ I+Y+ +IDG K +L L L + DVV FS I+ ++++G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
+ A + +M + N + Y+ LI C+ + EA Y + G T +
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
L+ FC+ G L+ + M +MG P + +++ G L A
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 77/149 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +T LI C +++ A R+ M G KPN VTYG L++ SK
Sbjct: 669 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 728
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E M+ G+ +SY+ +IDGLCK ++EA ++ + A + PDVV +++LI G+ +
Sbjct: 729 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 788
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTL 174
G++ A + M + + +++L L
Sbjct: 789 VGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 108/231 (46%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
+ + P+ T+ T++ +G +EEA L M GL+P+ + Y L++ KH K +
Sbjct: 525 YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTI 584
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
+ M+ N + +I L K +E+A +++++ + PD+VT++ +I
Sbjct: 585 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
G+ +++ A+ I + T N + + LI+ CK ++ A+ +++M G
Sbjct: 645 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 704
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+ T L+ F +S ++ + + M G+ PS ++ II+ G
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 755
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 92/194 (47%)
Query: 43 NIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYT 102
IE+A + + ++ ++P+ VTY ++ G + E +++ ++ T
Sbjct: 616 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 675
Query: 103 AMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKT 162
+I LCKN ++ A+ + M + P+ VT+ L++ F ++ I + ++ +M +
Sbjct: 676 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 735
Query: 163 VLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEA 222
+ + + YS +I CK + EA N + + + D +L+ +C+ GRL EA
Sbjct: 736 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 795
Query: 223 EYFMDHMSRMGLDP 236
+HM R G+ P
Sbjct: 796 ALLYEHMLRNGVKP 809
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 8/212 (3%)
Query: 51 LDEMVSHGLKPNEVT-YGALLNGLSKHSKFGLVSSTLERMRM---NGVRVGHISYTAMID 106
D++ G++P+ V+ +G +L+ L G V+ L+ R+ G RVG +S ++
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCK---GEVTKALDFHRLVMERGFRVGIVSCNKVLK 260
Query: 107 GLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVL 166
GL +++ E A LL +L P+VVTF LINGF + G+++ A ++ M + +
Sbjct: 261 GLSVDQI-EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEP 319
Query: 167 NNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFM 226
+ I YSTLI Y K L ++ H G D + + + +SG L A
Sbjct: 320 DLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVY 379
Query: 227 DHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
M G+ P+ + +I G +AF
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 115/233 (49%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ ++L++G +G IEEA L+ +V G+ PN Y AL++ L K KF
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+RM G+R ++Y+ +ID C+ L+ A+ L +M+ + V ++ LING +
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G I+ A+ M +M L + Y++L+ YC + +AL Y M G +T
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
L++ R+G +++A + M+ + P+ ++ +I Y GD KAF
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 123/241 (51%), Gaps = 6/241 (2%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L PN +TY+ LID C +G ++ A L EMV GLK + Y +L+NG H KFG +S
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING---HCKFGDIS 454
Query: 84 ST---LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ + M + ++YT+++ G C + +A+ L +M I P + TF+ L+
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL 514
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+G RAG I +A ++ +M + + N + Y+ +I YC+ ++ +A M G V
Sbjct: 515 SGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIV 574
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
D ++ L+ C +G+ EA+ F+D + + + + + +++ + G +A +
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 261 C 261
C
Sbjct: 635 C 635
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 118/226 (52%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
+N+ PN +TYN +I+G+C +G++ +AF L EM G+ P+ +Y L++GL +
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
++ + + I YT ++ G C+ LEEA+ + +M++ ++ D+V + VLI
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+G L+ ++ +M+ L ++++Y+++I K + KEA + +M + G V
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
+ T ++ C++G + EAE M + P+ + C ++
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 117/239 (48%), Gaps = 3/239 (1%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+L P+ +TY TL+ G C E ++DEM+ P+E +L+ GL K K
Sbjct: 292 DLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEA 351
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ ++R+ GV Y A+ID LCK R EA L D M K + P+ VT+S+LI+
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
F R GK++ A + +M T L L+ Y++LI +CK ++ A A M +
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG---DALKAF 258
T L+ +C G++ +A M+ G+ PS F +++ +G DA+K F
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 118/236 (50%), Gaps = 4/236 (1%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N I Y L+ G C +G +EEA + EMV G+ + V YG L++G KH L L
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+ M G++ + YT+MID K +EA + D M+ P+ VT++ +ING +A
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMR-NLKEALNTY-AVMNHSGHVSDHF 204
G +N A+ + KM V N + Y + K ++++A+ + A++ G +++
Sbjct: 731 GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK--GLLANTA 788
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
T N+L+ FCR GR++EA + M G+ P + +IN D KA L
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 844
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 2/214 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ + Y ++ID G+ +EAF + D M++ G PNEVTY A++NGL K
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRL-LEEAVHLLDDMLKASINPDVVTFSVLING 142
+M+ ++Y +D L K + +++AV L + +LK + + T+++LI G
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLL-ANTATYNMLIRG 796
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
F R G+I A E++ +M + + I Y+T+I C+ ++K+A+ + M G D
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDP 236
N L+ C +G + +A + M R GL P
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 114/236 (48%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F + PN YN LID C EA L D M GL+PN+VTY L++ + K
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDT 420
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
S L M G+++ Y ++I+G CK + A + +M+ + P VVT++ L+
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
G+ GKIN A + +M + + ++TL+ + +++A+ + M
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ T NV++ +C G + +A F+ M+ G+ P T ++ +I+ +G A +A
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+LLP T + L+ G + A L ++MVS G++P+ Y ++ L +
Sbjct: 187 SLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRA 246
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ M G V + Y +IDGLCK + + EAV + D+ + PDVVT+ L+ G
Sbjct: 247 KEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYG 306
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+ + E+M +M + S+L+ K ++EALN + G +
Sbjct: 307 LCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPN 366
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
F N L+ + C+ + EAE D M ++GL P+ + +I+ + G
Sbjct: 367 LFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRG 416
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 35/188 (18%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLN------------- 71
+PN +TY +I+G C G + EA L +M PN+VTYG L+
Sbjct: 714 VPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAV 773
Query: 72 ----------------------GLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLC 109
G + + S + RM +GV I+YT MI+ LC
Sbjct: 774 ELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC 833
Query: 110 KNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNI 169
+ +++A+ L + M + I PD V ++ LI+G AG++ A E+ +M + L+ NN
Sbjct: 834 RRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893
Query: 170 LYSTLIYN 177
T N
Sbjct: 894 TSRTTTSN 901
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
LL N TYN LI G C +G IEEA L+ M+ G+ P+ +TY ++N L + +
Sbjct: 783 LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI 842
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPD 132
M G+R ++Y +I G C + +A L ++ML+ + P+
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
++YNTLI G C K ++EAF LDEMV GLKP+ TY L+ GL +K +
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
+ NG+ +Y+ MIDG CK EE D+M+ ++ P+ V ++ LI + R+G+
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 660
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
++ A E+ M + N+ Y++LI + ++EA + M G + F
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 720
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
L+ + + G++ + E + M + P+ + +I Y G+ +A
Sbjct: 721 LIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 115/235 (48%), Gaps = 2/235 (0%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
T N L+ G C G ++EAFR+ E++ G + V+Y L++G K L+ M
Sbjct: 507 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 566
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
G++ + +Y+ +I GL +EEA+ DD + + PDV T+SV+I+G +A +
Sbjct: 567 VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 626
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
+E +M + N ++Y+ LI YC+ L AL M H G + T L
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFLCLIK 264
+ R++EA+ + M GL+P+ + +I+ YG G +K CL++
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV--ECLLR 739
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 92/178 (51%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S N+ PN + YN LI +C G + A L ++M G+ PN TY +L+ G+S S+
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
E MRM G+ YTA+IDG K + + LL +M +++P+ +T++V+I
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
G+ R G + A ++ +M + +V ++I Y IY Y K + EA N++
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAA 815
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN I YN LID G++ +A + D MVS GL TY L+ G K+ +
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L+ M G V S+T++I LC + + + A+ + +ML +++P + LI+G +
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK + A E+ + V++ + L++ C+ L EA + G V D +
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
N L++ C +L EA F+D M + GL P + +I
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+LP+ TY+ +IDG C EE DEM+S ++PN V Y L+ + + +
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
E M+ G+ +YT++I G+ +EEA L ++M + P+V ++ LI+G+
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G++ + ++ +M+ + N I Y+ +I Y + N+ EA M G V D
Sbjct: 726 GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 785
Query: 204 FTCNVLVATFCRSGRLKEA 222
T + + + G + EA
Sbjct: 786 ITYKEFIYGYLKQGGVLEA 804
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 17/249 (6%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ + T I+ C G +EEA +L +M G+ PN VT+ +++GL ++
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E+M G+ I+Y+ ++ GL + + + +A +L +M K P+V+ ++ LI+ F+
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCK-------MRNLKEALNTYAVMNHSG 198
AG +N A EI M L L + Y+TLI YCK R LKE L+ +N
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 437
Query: 199 HVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN---SYGNSGDAL 255
S ++ C A F+ M + P +I+ +G AL
Sbjct: 438 FTS-------VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490
Query: 256 KAFFLCLIK 264
+ +F L K
Sbjct: 491 ELWFQFLNK 499
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N+ P TLI G C G +A L + ++ G + T ALL+GL + K
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ + G + +SY +I G C + L+EA LD+M+K + PD T+S+LI G
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
K+ A + + ++ + YS +I CK +E + M +
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
N L+ +CRSGRL A + M G+ P+++ + +I
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TYNTLI G+C G + A RLL EM+S G N+ ++ +++ L H F + M
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ + G T +I GLCK+ +A+ L L D T + L++G AGK+
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
+ A I ++ V++ + Y+TLI C + L EA M G D++T ++L
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
+ +++EA F D R G+ P + +I+
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L PN Y LIDG+ G + + LL EM S + PN++TY ++ G ++ S
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASI 129
L MR G+ I+Y I G K + EA D+ A+I
Sbjct: 771 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAI 816
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
++YNTLI G C K ++EAF LDEMV GLKP+ TY L+ GL +K +
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
+ NG+ +Y+ MIDG CK EE D+M+ ++ P+ V ++ LI + R+G+
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 660
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
++ A E+ M + N+ Y++LI + ++EA + M G + F
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 720
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
L+ + + G++ + E + M + P+ + +I Y G+ +A
Sbjct: 721 LIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 115/235 (48%), Gaps = 2/235 (0%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
T N L+ G C G ++EAFR+ E++ G + V+Y L++G K L+ M
Sbjct: 507 TSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM 566
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
G++ + +Y+ +I GL +EEA+ DD + + PDV T+SV+I+G +A +
Sbjct: 567 VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 626
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
+E +M + N ++Y+ LI YC+ L AL M H G + T L
Sbjct: 627 EEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 686
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFLCLIK 264
+ R++EA+ + M GL+P+ + +I+ YG G +K CL++
Sbjct: 687 IKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKV--ECLLR 739
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 92/178 (51%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S N+ PN + YN LI +C G + A L ++M G+ PN TY +L+ G+S S+
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
E MRM G+ YTA+IDG K + + LL +M +++P+ +T++V+I
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
G+ R G + A ++ +M + +V ++I Y IY Y K + EA N++
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAA 815
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN I YN LID G++ +A + D MVS GL TY L+ G K+ +
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L+ M G V S+T++I LC + + + A+ + +ML +++P + LI+G +
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK + A E+ + V++ + L++ C+ L EA + G V D +
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
N L++ C +L EA F+D M + GL P + +I
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+LP+ TY+ +IDG C EE DEM+S ++PN V Y L+ + + +
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
E M+ G+ +YT++I G+ +EEA L ++M + P+V ++ LI+G+
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G++ + ++ +M+ + N I Y+ +I Y + N+ EA M G V D
Sbjct: 726 GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 785
Query: 204 FTCNVLVATFCRSGRLKEA 222
T + + + G + EA
Sbjct: 786 ITYKEFIYGYLKQGGVLEA 804
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 17/249 (6%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ + T I+ C G +EEA +L +M G+ PN VT+ +++GL ++
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E+M G+ I+Y+ ++ GL + + + +A +L +M K P+V+ ++ LI+ F+
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCK-------MRNLKEALNTYAVMNHSG 198
AG +N A EI M L L + Y+TLI YCK R LKE L+ +N
Sbjct: 378 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGS 437
Query: 199 HVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN---SYGNSGDAL 255
S ++ C A F+ M + P +I+ +G AL
Sbjct: 438 FTS-------VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490
Query: 256 KAFFLCLIK 264
+ +F L K
Sbjct: 491 ELWFQFLNK 499
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N+ P TLI G C G +A L + ++ G + T ALL+GL + K
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ + G + +SY +I G C + L+EA LD+M+K + PD T+S+LI G
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
K+ A + + ++ + YS +I CK +E + M +
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
N L+ +CRSGRL A + M G+ P+++ + +I
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TYNTLI G+C G + A RLL EM+S G N+ ++ +++ L H F + M
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ + G T +I GLCK+ +A+ L L D T + L++G AGK+
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
+ A I ++ V++ + Y+TLI C + L EA M G D++T ++L
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSIL 581
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
+ +++EA F D R G+ P + +I+
Sbjct: 582 ICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L PN Y LIDG+ G + + LL EM S + PN++TY ++ G ++ S
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASI 129
L MR G+ I+Y I G K + EA D+ A+I
Sbjct: 771 RLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAI 816
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 119/234 (50%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+C++YN++IDG +G ++ A +EM +G+ PN +TY +L+NGL K+++
Sbjct: 583 SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMR 642
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+ M+ GV++ +Y A+IDG CK +E A L ++L+ +NP ++ LI+GF
Sbjct: 643 DEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNL 702
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G + A ++ KM K L + Y+TLI K NL A Y M G V D
Sbjct: 703 GNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIY 762
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
V+V + G+ + + M + + P+ ++ +I + G+ +AF L
Sbjct: 763 TVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 816
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN ITY +L++G C +++A + DEM + G+K + YGAL++G K S S+
Sbjct: 617 PNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASAL 676
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ G+ Y ++I G + A+ L MLK + D+ T++ LI+G L+
Sbjct: 677 FSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLK 736
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G + A E+ +M LV + I+Y+ ++ K + + + M + +
Sbjct: 737 DGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLI 796
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
N ++A R G L EA D M G+ P + FD +++
Sbjct: 797 YNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS 837
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 118/269 (43%), Gaps = 36/269 (13%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG--- 80
L PN TY+ LIDG + + A +++ M S ++ N V Y ++NGL K +
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 81 -LVSSTLERMRM--------------------------------NGVRVGHISYTAMIDG 107
L+++ +E R+ NG+ I+YT++++G
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628
Query: 108 LCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLN 167
LCKN +++A+ + D+M + D+ + LI+GF + + +A + ++ + L +
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688
Query: 168 NILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMD 227
+Y++LI + + N+ AL+ Y M G D T L+ + G L A
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYT 748
Query: 228 HMSRMGLDPSTSAFDCIINSYGNSGDALK 256
M +GL P + I+N G +K
Sbjct: 749 EMQAVGLVPDEIIYTVIVNGLSKKGQFVK 777
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 117/272 (43%), Gaps = 36/272 (13%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
L N NT++ C +G +EA LL +M S G+ PN V+Y ++ G + L
Sbjct: 440 LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARI 499
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
+ G++ + +Y+ +IDG +N + A+ +++ M ++I + V + +ING
Sbjct: 500 VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLC 559
Query: 145 RAGKINNAKEIM------------CKMYKTV------------------------LVLNN 168
+ G+ + A+E++ C Y ++ + N
Sbjct: 560 KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNV 619
Query: 169 ILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDH 228
I Y++L+ CK + +AL M + G D L+ FC+ ++ A
Sbjct: 620 ITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSE 679
Query: 229 MSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+ GL+PS ++ +I+ + N G+ + A L
Sbjct: 680 LLEEGLNPSQPIYNSLISGFRNLGNMVAALDL 711
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 36/221 (16%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
+P+ TY ++I +GN+++A RL DEM+S G+ N V
Sbjct: 301 VPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVV-------------------- 340
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
+ T++I G CKN L A+ L D M K +P+ VTFSVLI F
Sbjct: 341 ---------------AATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ G++ A E KM L + T+I + K + +EAL + +G +++ F
Sbjct: 386 KNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVF 444
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
CN +++ C+ G+ EA + M G+ P+ +++ ++
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVM 485
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 63/113 (55%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TY TLIDG GN+ A L EM + GL P+E+ Y ++NGLSK +F V E M
Sbjct: 726 TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ N V + Y A+I G + L+EA L D+ML I PD TF +L++G
Sbjct: 786 KKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 107/231 (46%), Gaps = 1/231 (0%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N + +LI GHC ++ A L D+M G PN VT+ L+ K+ +
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
++M + G+ +I G K + EEA+ L D+ + + +V + +++ +
Sbjct: 398 KKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQ 456
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
GK + A E++ KM + N + Y+ ++ +C+ +N+ A ++ + G +++T
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
++L+ R+ + A ++HM+ ++ + + IIN G KA
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKA 567
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 102/224 (45%), Gaps = 2/224 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ +T+I G EEA +L DE GL N +L+ L K K +
Sbjct: 405 LTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEAT 463
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L +M G+ +SY ++ G C+ + ++ A + ++L+ + P+ T+S+LI+G
Sbjct: 464 ELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGC 523
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV-SD 202
R NA E++ M + + +N ++Y T+I CK+ +A A M +
Sbjct: 524 FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVS 583
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
+ N ++ F + G + A + M G+ P+ + ++N
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMN 627
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNG 72
N+ PN + YN +I GH +GN++EAFRL DEM+ G+ P+ T+ L++G
Sbjct: 789 NVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 94/246 (38%), Gaps = 36/246 (14%)
Query: 49 RLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGL 108
+L+D S G + N + LLN SK + + +M V + L
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 109 CKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNN 168
+ L EA L M+ ++ D VT +L+ LR K A E++ + + ++
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 169 ILYSTLIYNYCK----------MRNLKE------ALNTY---------------AVMNHS 197
+LYS + CK +R +KE + TY A+
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328
Query: 198 GHVSDHFTCNVLVAT-----FCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+SD + NV+ AT C++ L A D M + G P++ F +I + +G
Sbjct: 329 EMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNG 388
Query: 253 DALKAF 258
+ KA
Sbjct: 389 EMEKAL 394
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 113/221 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TYN+L++ +C +GN+EE ++ ++SHGL+ N VTY LL+ L H + V
Sbjct: 277 PDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEI 336
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L M I+Y +I+GLCK RLL A+ ML+ PD+VT++ ++ +
Sbjct: 337 LNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSK 396
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G +++A E++ + T I Y+++I K +K+AL Y M +G D T
Sbjct: 397 EGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDIT 456
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
L+ FCR+ ++EA + S G S + +I
Sbjct: 457 RRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQ 497
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 104/235 (44%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ ITYNT+I GN E+A R + + +G P +TY L+ + ++
Sbjct: 207 PDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEV 266
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
LE M + G ++Y ++++ C+ LEE ++ +L + + VT++ L++
Sbjct: 267 LEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCS 326
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+ +EI+ MY+T I Y+ LI CK R L A++ + M + D T
Sbjct: 327 HEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVT 386
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
N ++ + G + +A + + P ++ +I+ G KA L
Sbjct: 387 YNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALEL 441
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
T N ++ CS G + +A +L++ M H P+ + L+ GL++ + L M
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
M+G I+Y +I LCK + A+ LL+DM + PDV+T++ +I G
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A + I Y+ L+ C+ A+ M G D T N L
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
V CR G L+E + H+ GL+ +T ++ +++S
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHS 323
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P ITYN++IDG KG +++A L +M+ G+ P+++T +L+ G + +
Sbjct: 417 PGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQV 476
Query: 86 LERM--RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L+ R NG+R +Y +I GLCK + +E A+ +++ ML PD ++ ++ G
Sbjct: 477 LKETSNRGNGIRGS--TYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGV 534
Query: 144 LRAG 147
G
Sbjct: 535 EEMG 538
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 97/224 (43%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N +P+ + + L+ G +++A +L MV G P+ +TY ++ L K
Sbjct: 134 NQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTA 193
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
LE M ++G I+Y +I + E+A+ D L+ P ++T++VL+
Sbjct: 194 LVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVEL 253
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
R A E++ M + + Y++L+ C+ NL+E + + G +
Sbjct: 254 VCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELN 313
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
T N L+ + C E E ++ M + P+ ++ +IN
Sbjct: 314 TVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILIN 357
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 114/206 (55%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY++LI G C G + +A R L EM S + PN +T+ AL++ +K K V S
Sbjct: 81 PNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSV 140
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M + +Y+++I GLC + ++EA+ +LD M+ P+VVT+S L NGF +
Sbjct: 141 YKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFK 200
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+ ++++ +++ M + + N + +TLI Y + + AL + M +G + + +
Sbjct: 201 SSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRS 260
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSR 231
N+++A +G +++A +HM +
Sbjct: 261 YNIVLAGLFANGEVEKALSRFEHMQK 286
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 117/227 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T ++L++G C +I++A + +M G+K + V L++ L K+
Sbjct: 11 PDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEV 70
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L+RM+ G+ ++Y+++I GLCK+ L +A L +M INP+V+TFS LI+ + +
Sbjct: 71 LKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAK 130
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK++ + M + + N YS+LIY C + EA+ +M G + T
Sbjct: 131 RGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVT 190
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+ L F +S R+ + +D M + G+ +T + + +I Y +G
Sbjct: 191 YSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 237
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 115/239 (48%), Gaps = 5/239 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN IT++ LID + +G + + + M+ + PN TY +L+ GL H++
Sbjct: 116 PNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKM 175
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L+ M G ++Y+ + +G K+ +++ + LLDDM + + + V+ + LI G+ +
Sbjct: 176 LDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQ 235
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AGKI+ A + M L+ N Y+ ++ +++AL+ + M + + D T
Sbjct: 236 AGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIIT 295
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG-----DALKAFF 259
+++ C++ +KEA + ++P A+ +I +G DAL F+
Sbjct: 296 YTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFY 354
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 105/225 (46%)
Query: 34 LIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNG 93
LID C + A +L M G+ PN VTY +L+ GL K + L M
Sbjct: 54 LIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK 113
Query: 94 VRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAK 153
+ I+++A+ID K L + + M++ SI+P+V T+S LI G +++ A
Sbjct: 114 INPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAI 173
Query: 154 EIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATF 213
+++ M N + YSTL + K + + + M G ++ +CN L+ +
Sbjct: 174 KMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGY 233
Query: 214 CRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
++G++ A +M+ GL P+ +++ ++ +G+ KA
Sbjct: 234 FQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKAL 278
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%)
Query: 124 MLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRN 183
M+K I PD+VT S L+NGF + I +A + +M K + + ++ + LI CK R
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 184 LKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDC 243
+ AL M G + T + L+ C+SGRL +AE + M ++P+ F
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 244 IINSYGNSG 252
+I++Y G
Sbjct: 124 LIDAYAKRG 132
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 43/200 (21%)
Query: 53 EMVSHGLKPNEVTYGALLNG--LSKHSKFGL-VSSTLERMRMNGVRVGHISYTAMIDGLC 109
+M+ G++P+ VT +L+NG LS K + V+ +E+M G++ + T +ID LC
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKM---GIKRDVVVDTILIDTLC 59
Query: 110 KNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNI 169
KNRL+ A+ +L M I+P+VVT
Sbjct: 60 KNRLVVPALEVLKRMKDRGISPNVVT---------------------------------- 85
Query: 170 LYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHM 229
YS+LI CK L +A M+ + T + L+ + + G+L + + M
Sbjct: 86 -YSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMM 144
Query: 230 SRMGLDPSTSAFDCIINSYG 249
+M +DP+ + +I YG
Sbjct: 145 IQMSIDPNVFTYSSLI--YG 162
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 1/237 (0%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
SF + PN T N L+ C K +IE A+++LDE+ S GL PN VTY +L G
Sbjct: 184 SFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDME 243
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
LE M G +YT ++DG CK EA ++DDM K I P+ VT+ V+I
Sbjct: 244 SAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMI 303
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+ K A+ + +M + + ++ L +I C+ + EA + M + +
Sbjct: 304 RALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCM 363
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
D+ + L+ C+ GR+ EA D + G PS ++ +I G+ +A
Sbjct: 364 PDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEA 419
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 128/273 (46%), Gaps = 37/273 (13%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S L+PN +TY T++ G+ ++G++E A R+L+EM+ G P+ TY L++G K +F
Sbjct: 219 SMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFS 278
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
++ ++ M N + ++Y MI LCK + EA ++ D+ML+ S PD +I
Sbjct: 279 EAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVI 338
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEA------------- 187
+ K++ A + KM K + +N L STLI+ CK + EA
Sbjct: 339 DALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIP 398
Query: 188 -LNTY----------AVMNHSGHVSDH----------FTCNVLVATFCRSGRLKEAEYFM 226
L TY + +G + D FT NVL+ ++G +KE +
Sbjct: 399 SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVL 458
Query: 227 DHMSRMGLDPSTSAFDCI---INSYGNSGDALK 256
+ M +G P+ + F + + G DA+K
Sbjct: 459 EEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMK 491
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%), Gaps = 1/199 (0%)
Query: 42 GNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMN-GVRVGHIS 100
G E + R+ + G+K + + LLN L ++ +F LV + + + + G+ +
Sbjct: 134 GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFT 193
Query: 101 YTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMY 160
++ LCK +E A +LD++ + P++VT++ ++ G++ G + +AK ++ +M
Sbjct: 194 CNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML 253
Query: 161 KTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLK 220
+ Y+ L+ YCK+ EA M + + T V++ C+ +
Sbjct: 254 DRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSG 313
Query: 221 EAEYFMDHMSRMGLDPSTS 239
EA D M P +S
Sbjct: 314 EARNMFDEMLERSFMPDSS 332
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N +P+ +TLI C +G + EA +L DE G P+ +TY L+ G+ + +
Sbjct: 361 NCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEA 419
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ M + +Y +I+GL KN ++E V +L++ML+ P+ TF +L G
Sbjct: 420 GRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEG 479
Query: 143 FLRAGKINNAKEIM 156
+ GK +A +I+
Sbjct: 480 LQKLGKEEDAMKIV 493
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 3/175 (1%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+ +P+ +ID C ++EA L +M+ + P+ L++ L K +
Sbjct: 326 SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA 385
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ G ++Y +I G+C+ L EA L DDM + P+ T++VLI G
Sbjct: 386 RKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEG 444
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALN--TYAVMN 195
+ G + ++ +M + N + L K+ ++A+ + AVMN
Sbjct: 445 LSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMN 499
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 114/228 (50%), Gaps = 1/228 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ P+ TYNTLI +C K EA + D M G+ PN VTY + ++G S+ + +
Sbjct: 234 VFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT 293
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
++ + V H++YT +IDG C+ ++EA+ L + M +P VVT++ ++
Sbjct: 294 RLFREIK-DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKL 352
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
G+I A ++ +M + +NI +TLI YCK+ ++ A+ M SG D
Sbjct: 353 CEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDM 412
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS 251
++ L+ FC+ L+ A+ + M G P + + +++ + N
Sbjct: 413 YSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQ 460
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 106/234 (45%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P +TYN+++ C G I EA RLL EM ++P+ +T L+N K
Sbjct: 340 PGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKV 399
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++M +G+++ SY A+I G CK LE A L M++ +P T+S L++GF
Sbjct: 400 KKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYN 459
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
K + +++ + K L + LY LI CK+ + A + M G V D
Sbjct: 460 QNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVI 519
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFF 259
+ + R+G++ EA D M L + + I SY D L+ F+
Sbjct: 520 FTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAGDNDVLRFFW 573
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 111/237 (46%), Gaps = 1/237 (0%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S L P+ L++ + + +++ +MV G+ N Y L++ SK
Sbjct: 161 SCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPE 220
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
L M GV +Y +I CK + EA+ + D M ++ + P++VT++ I
Sbjct: 221 KAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFI 280
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+GF R G++ A + ++ K + N++ Y+TLI YC+M ++ EAL VM G
Sbjct: 281 HGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFS 339
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
T N ++ C GR++EA + MS ++P + +IN+Y D + A
Sbjct: 340 PGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSA 396
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 96/194 (49%), Gaps = 18/194 (9%)
Query: 47 AFRLLDEMVSHGLKPNEVTYGALLNGLSK---------------HSKFGLVSSTL---ER 88
A +LLD++ L + + +L+ G+S+ ++K G+++ ++ E+
Sbjct: 99 AHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQ 158
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
+R G++ + T +++ L K RL + + M+K + ++ ++VL++ ++G
Sbjct: 159 IRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGD 218
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
A++++ +M + + + Y+TLI YCK EAL+ M SG + T N
Sbjct: 219 PEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNS 278
Query: 209 LVATFCRSGRLKEA 222
+ F R GR++EA
Sbjct: 279 FIHGFSREGRMREA 292
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 119/228 (52%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S + P+ +TYNT+I G+C G ++A L +M + G + +++TY ++ S FG
Sbjct: 250 SGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFG 309
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ + M G++V +++ +I GLCK L E + ++M++ P+V ++VLI
Sbjct: 310 SCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLI 369
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+G+ ++G + +A ++ +M + + YS ++ CK ++EAL+ + G
Sbjct: 370 DGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLA 429
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
+ + L+ ++GR+ EAE + MS G + ++ +I+++
Sbjct: 430 INSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 477
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 1/210 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN Y LIDG+ G++E+A RLL M+ G KP+ VTY ++NGL K+ +
Sbjct: 360 PNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDY 419
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
R +G+ + + Y+++IDGL K ++EA L ++M + D ++ LI+ F +
Sbjct: 420 FHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTK 479
Query: 146 AGKINNAKEIMCKMYKTVLVLNNI-LYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
K++ A + +M + + Y+ L+ K +EAL + +M G
Sbjct: 480 HRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAA 539
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGL 234
L C SG++ A +D ++ MG+
Sbjct: 540 CFRALSTGLCLSGKVARACKILDELAPMGV 569
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 4/229 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P TYN L++G S ++ A R+ + M S +KP+ VTY ++ G K +
Sbjct: 220 PTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEK 279
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L M G I+Y MI + V L +M + I FS++I G +
Sbjct: 280 LRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCK 339
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK+N + M + N +Y+ LI Y K ++++A+ M G D T
Sbjct: 340 EGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVT 399
Query: 206 CNVLVATFCRSGRLKEA-EYFMDHMSRM-GLDPSTSAFDCIINSYGNSG 252
+V+V C++GR++EA +YF H R GL ++ + +I+ G +G
Sbjct: 400 YSVVVNGLCKNGRVEEALDYF--HTCRFDGLAINSMFYSSLIDGLGKAG 446
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 111/216 (51%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
Y ++ID C K +EEA L+ EM HG++ N AL+ GL + S+ G S L M
Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
NG R +SY +I GLCK EA + +ML+ PD+ T+S+L+ G R KI
Sbjct: 491 GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI 550
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
+ A E+ + ++ L + ++++ LI+ C + L +A+ A M H ++ T N L
Sbjct: 551 DLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTL 610
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
+ F + G A +M +MGL P +++ I+
Sbjct: 611 MEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 1/198 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN TYN LI C K E+A LD M G KP+ +Y ++N L+K K
Sbjct: 147 PNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALEL 206
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLK-ASINPDVVTFSVLINGFL 144
+ M GV Y +IDG K + + A+ L D +L+ +S+ P+V T +++I+G
Sbjct: 207 FDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLS 266
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ G++++ +I +M + + YS+LI+ C N+ +A + + ++ D
Sbjct: 267 KCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVV 326
Query: 205 TCNVLVATFCRSGRLKEA 222
T N ++ FCR G++KE+
Sbjct: 327 TYNTMLGGFCRCGKIKES 344
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%)
Query: 32 NTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRM 91
N LI G + EA L EM +G +P V+Y L+ GL K KFG S+ ++ M
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 92 NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINN 151
NG + +Y+ ++ GLC++R ++ A+ L L++ + DV+ ++LI+G GK+++
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 152 AKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVA 211
A +M M N + Y+TL+ + K+ + A + M G D + N ++
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 212 TFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGN 250
C + A F D G+ P+ ++ ++ + N
Sbjct: 648 GLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 9/220 (4%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TY++LI G C GN+++A + +E+ + VTY +L G + G + +LE
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR---CGKIKESLELW 348
Query: 90 RM----NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
R+ N V + +SY +I GL +N ++EA + M D T+ + I+G
Sbjct: 349 RIMEHKNSVNI--VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCV 406
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G +N A +M ++ + L+ Y+++I CK + L+EA N M+ G +
Sbjct: 407 NGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHV 466
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
CN L+ R RL EA +F+ M + G P+ +++ +I
Sbjct: 467 CNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILI 506
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 91/185 (49%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P ++YN LI G C G EA + EM+ +G KP+ TY LL GL + K L
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALEL 556
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ +G+ + + +I GLC L++A+ ++ +M + ++VT++ L+ GF +
Sbjct: 557 WHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK 616
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G N A I MYK L + I Y+T++ C R + A+ + + G +T
Sbjct: 617 VGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYT 676
Query: 206 CNVLV 210
N+LV
Sbjct: 677 WNILV 681
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TY I G C G + +A ++ E+ S G + Y ++++ L K + S+ ++ M
Sbjct: 396 TYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEM 455
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+GV + A+I GL ++ L EA L +M K P VV++++LI G +AGK
Sbjct: 456 SKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKF 515
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A + +M + + YS L+ C+ R + AL + SG +D N+L
Sbjct: 516 GEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNIL 575
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ C G+L +A M +M + ++ ++ + GD+ +A
Sbjct: 576 IHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 108/222 (48%), Gaps = 2/222 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHG-LKPNEVTYGALLNGLSKHSKFGLVSS 84
P+ YN LIDG + + + A L D ++ + PN T+ +++GLSK +
Sbjct: 217 PDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLK 276
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
ERM+ N +Y+++I GLC +++A + +++ + + DVVT++ ++ GF
Sbjct: 277 IWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFC 336
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
R GKI + E+ ++ + +N + Y+ LI + + EA + +M G+ +D
Sbjct: 337 RCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKT 395
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
T + + C +G + +A M + G A+ II+
Sbjct: 396 TYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIID 437
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 1/219 (0%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +TYNT++ G C G I+E+ L ++ H N V+Y L+ GL ++ K +
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIW 382
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
M G +Y I GLC N + +A+ ++ ++ + + DV ++ +I+ +
Sbjct: 383 RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKK 442
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
++ A ++ +M K + LN+ + + LI + L EA M +G +
Sbjct: 443 KRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSY 502
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
N+L+ C++G+ EA F+ M G P + ++
Sbjct: 503 NILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILL 541
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 3/213 (1%)
Query: 46 EAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMI 105
+ F+ + E+ G +P +Y LLN + ++ V S GV +Y +I
Sbjct: 99 DVFKRMREIF--GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156
Query: 106 DGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLV 165
CK + E+A LD M K PDV ++S +IN +AGK+++A E+ +M + +
Sbjct: 157 KMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVA 216
Query: 166 LNNILYSTLIYNYCKMRNLKEALNTY-AVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEY 224
+ Y+ LI + K ++ K A+ + ++ S + T N++++ + GR+ +
Sbjct: 217 PDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLK 276
Query: 225 FMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ M + + + +I+ ++G+ KA
Sbjct: 277 IWERMKQNEREKDLYTYSSLIHGLCDAGNVDKA 309
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 106/211 (50%), Gaps = 1/211 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TY + I GHC + ++ AF++ EM +G NEV+Y L+ GL + K S
Sbjct: 188 PDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSL 247
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L +M+ + +YT +ID LC + EA++L M ++ I PD ++VLI F
Sbjct: 248 LVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCS 307
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
++ A ++ M + L+ N I Y+ LI +CK +N+ +A+ + M V D T
Sbjct: 308 GDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLIT 366
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDP 236
N L+A C SG L A + M GL P
Sbjct: 367 YNTLIAGQCSSGNLDSAYRLLSLMEESGLVP 397
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 2/227 (0%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
+ L P C YN L+ G +EE RL EM+ + P+ T+ L+NG K
Sbjct: 116 YKLTPKC--YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVE 173
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
+ + G + +YT+ I G C+ + ++ A + +M + + + V+++ LI
Sbjct: 174 AKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIY 233
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
G A KI+ A ++ KM N Y+ LI C EA+N + M+ SG
Sbjct: 234 GLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKP 293
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
D VL+ +FC L EA ++HM GL P+ ++ +I +
Sbjct: 294 DDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGF 340
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N PN TY LID C G EA L +M G+KP++ Y L+
Sbjct: 255 NCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEA 314
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
S LE M NG+ I+Y A+I G CK + +A+ LL ML+ ++ PD++T++ LI G
Sbjct: 315 SGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAG 373
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNN 168
+G +++A ++ M ++ LV N
Sbjct: 374 QCSSGNLDSAYRLLSLMEESGLVPNQ 399
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 36/190 (18%)
Query: 101 YTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMC--- 157
Y ++ L + L+EE L +ML+ ++PD+ TF+ L+NG+ + G + AK+ +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 158 ----------------------------KMYKTVLV----LNNILYSTLIYNYCKMRNLK 185
K++K + N + Y+ LIY + + +
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 186 EALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
EAL+ M + T VL+ C SG+ EA MS G+ P + +I
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 246 NSYGNSGDAL 255
S+ SGD L
Sbjct: 303 QSFC-SGDTL 311
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 31/43 (72%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVT 65
NL+P+ ITYNTLI G CS GN++ A+RLL M GL PN+ T
Sbjct: 359 NLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 125/236 (52%), Gaps = 4/236 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKH-SKFGLVSS 84
P+ ++ + + +G A ++ +M+ LKPN +T LL GL ++ S F + S+
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 85 --TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKA-SINPDVVTFSVLIN 141
+ M GV + ++ +++G C LE+A+ +L+ M+ +NPD VT++ ++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
+ G++++ KE++ M K LV N + Y+ L+Y YCK+ +LKEA +M + +
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
D T N+L+ C +G ++E MD M + L P ++ +I+ G +L+A
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHS--- 77
S L P+ +TYNTLIDG G EA +L+++M + G+K N+VT+ L L K
Sbjct: 338 SLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKRE 397
Query: 78 ------------------------------KFGLVSSTLERMR---MNGVRVGHISYTAM 104
K G +S LE MR G+++ I+ +
Sbjct: 398 AVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTI 457
Query: 105 IDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVL 164
+D LCK R L+EA +LL+ K D VT+ LI GF R K+ A E+ +M K +
Sbjct: 458 LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKI 517
Query: 165 VLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEY 224
+++LI C + A+ + + SG + D T N ++ +C+ GR+++A
Sbjct: 518 TPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFE 577
Query: 225 FMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA--FFLCLIK 264
F + + P + ++N G KA FF LI+
Sbjct: 578 FYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE 619
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 113/255 (44%), Gaps = 34/255 (13%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY+TLI + G++ A ++ EM G+K N +T +L+ L K K +
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L G V ++Y +I G + +E+A+ + D+M K I P V TF+ LI G
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK A E ++ ++ L+ ++ ++++I YCK +++A Y D++T
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593
Query: 206 CNVL----------------------------------VATFCRSGRLKEAEYFMDHMSR 231
CN+L ++ FC+ +LKEA + M
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEE 653
Query: 232 MGLDPSTSAFDCIIN 246
GL+P ++ I+
Sbjct: 654 KGLEPDRFTYNSFIS 668
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
+TY TLI G + +E+A + DEM + P T+ +L+ GL H K L +
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
+ +G+ ++ ++I G CK +E+A ++ +K S PD T ++L+NG + G
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
A + + V + + Y+T+I +CK + LKEA + + M G D FT N
Sbjct: 607 TEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNS 665
Query: 209 LVATFCRSGRLKEAEYFMDHMS 230
++ G+L E + + S
Sbjct: 666 FISLLMEDGKLSETDELLKKFS 687
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 3/229 (1%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
F + P+ +TYNT++ KG + + LL +M +GL PN VTY L+ G K
Sbjct: 233 EFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLK 292
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+E M+ V +Y +I+GLC + E + L+D M + PDVVT++ LI
Sbjct: 293 EAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLI 352
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEAL--NTYAVMNHSG 198
+G G A+++M +M + N + ++ + CK +EA+ +++ G
Sbjct: 353 DGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEK-REAVTRKVKELVDMHG 411
Query: 199 HVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
D T + L+ + + G L A M M + G+ +T + I+++
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA 460
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
LLP+ T+N++I G+C +G +E+AF +E + H KP+ T LLNGL K G+
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE---GMTE 608
Query: 84 STLE--RMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
L + V ++Y MI CK++ L+EA LL +M + + PD T++ I+
Sbjct: 609 KALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFIS 668
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
+ GK++ E++ K + L N + KE LNT A+ S
Sbjct: 669 LLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSES-KEELNTEAIA-----YS 722
Query: 202 DHFTCNVLVATFCRSGRLKE 221
D ++ C GRLKE
Sbjct: 723 D------VIDELCSRGRLKE 736
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 113/233 (48%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TY++L+ G + +I+ LL EM + GLKPN T+ + L + K
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 280
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L+RM G ++YT +ID LC R L+ A + + M PD VT+ L++ F
Sbjct: 281 LKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD 340
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+++ K+ +M K V + + ++ L+ CK N EA +T VM G + + T
Sbjct: 341 NRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHT 400
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
N L+ R RL +A +M +G+ P+ + I+ YG SGD++ A
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 112/222 (50%), Gaps = 1/222 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P TY LIDG G + EA +L + M+ +G +PN Y L+NG K + +
Sbjct: 889 PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACAL 948
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+RM GVR +Y+ ++D LC ++E +H ++ ++ +NPDVV ++++ING +
Sbjct: 949 FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK 1008
Query: 146 AGKINNAKEIMCKMYKTVLVLNNI-LYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ ++ A + +M + + ++ Y++LI N ++EA Y + +G + F
Sbjct: 1009 SHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVF 1068
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
T N L+ + SG+ + A M G P+T ++ + N
Sbjct: 1069 TFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 110/234 (47%), Gaps = 2/234 (0%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLL-DEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
N IT+N +I G GN+++A L D M P TYG L++GLSK +
Sbjct: 854 NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 913
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E M G R Y +I+G K + A L M+K + PD+ T+SVL++
Sbjct: 914 FEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM 973
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHS-GHVSDHF 204
G+++ ++ ++ L + + Y+ +I K L+EAL + M S G D +
Sbjct: 974 VGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY 1033
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
T N L+ +G ++EA + + R GL+P+ F+ +I Y SG A+
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAY 1087
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 109/235 (46%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY LID C+ ++ A + ++M + KP+ VTY LL+ S + V
Sbjct: 291 PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M +G +++T ++D LCK EA LD M I P++ T++ LI G LR
Sbjct: 351 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR 410
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
++++A E+ M + Y I Y K + AL T+ M G +
Sbjct: 411 VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
CN + + ++GR +EA+ + +GL P + ++ ++ Y G+ +A L
Sbjct: 471 CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 525
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 106/236 (44%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
+P+ +T+ L+D C GN EAF LD M G+ PN TY L+ GL + +
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
M GV+ +Y ID K+ A+ + M I P++V + +
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLA 479
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+AG+ AK+I + LV +++ Y+ ++ Y K+ + EA+ + M +G D
Sbjct: 480 KAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVI 539
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
N L+ T ++ R+ EA M M L P+ ++ ++ G +G +A L
Sbjct: 540 VVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 8/233 (3%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
+P+ TYN L+D + G I+E F L EM +H + N +T+ +++GL K G V
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA---GNVDD 873
Query: 85 TL----ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
L + M +Y +IDGL K+ L EA L + ML P+ +++LI
Sbjct: 874 ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILI 933
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
NGF +AG+ + A + +M K + + YS L+ C + + E L+ + + SG
Sbjct: 934 NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN 993
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHM-SRMGLDPSTSAFDCIINSYGNSG 252
D N+++ +S RL+EA + M + G+ P ++ +I + G +G
Sbjct: 994 PDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAG 1046
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY TL+D +++ + EM G P+ VT+ L++ L K FG T
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L+ MR G+ +Y +I GL + L++A+ L +M + P T+ V I+ + +
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+G +A E KM + N + + +Y+ K +EA + + G V D T
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
N+++ + + G + EA + M G +P + +IN+
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 102/229 (44%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TY T+ KG +++A L +M G N +Y L++ L K RM
Sbjct: 155 TYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM 214
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ G R +Y++++ GL K R ++ + LL +M + P+V TF++ I RAGKI
Sbjct: 215 ILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKI 274
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
N A EI+ +M + + Y+ LI C R L A + M H D T L
Sbjct: 275 NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITL 334
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
+ F + L + F M + G P F ++++ +G+ +AF
Sbjct: 335 LDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 90/165 (54%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+P+ +TYN ++ + G I+EA +LL EM+ +G +P+ + +L+N L K +
Sbjct: 499 LVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAW 558
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
RM+ ++ ++Y ++ GL KN ++EA+ L + M++ P+ +TF+ L +
Sbjct: 559 KMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEAL 188
+ ++ A +++ KM V + Y+T+I+ K +KEA+
Sbjct: 619 CKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 105/225 (46%), Gaps = 4/225 (1%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+LPN TYNTLI G +++A L M S G+KP TY ++ K
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
T E+M+ G+ ++ A + L K EA + + + PD VT+++++ +
Sbjct: 454 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 513
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G+I+ A +++ +M + + I+ ++LI K + EA + M
Sbjct: 514 SKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTV 573
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPST----SAFDCI 244
T N L+A ++G+++EA + M + G P+T + FDC+
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 104/237 (43%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S + P TY ID + G+ A ++M + G+ PN V A L L+K +
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
++ G+ ++Y M+ K ++EA+ LL +M++ PDV+ + LI
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
N +A +++ A ++ +M + L + Y+TL+ K ++EA+ + M G
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCP 605
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ T N L C++ + A + M MG P ++ II +G +A
Sbjct: 606 PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ PN + N + G EA ++ + GL P+ VTY ++ SK +
Sbjct: 464 IAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAI 523
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L M NG I ++I+ L K ++EA + M + + P VVT++ L+ G
Sbjct: 524 KLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ GKI A E+ M + N I ++TL CK + AL M G V D
Sbjct: 584 GKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDV 643
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRM 232
FT N ++ ++G++KEA F M ++
Sbjct: 644 FTYNTIIFGLVKNGQVKEAMCFFHQMKKL 672
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 114/244 (46%), Gaps = 5/244 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGL-KPNEVTYGALLNGLSKHSKFGLVSS 84
P + + LI ++ I+ A + +V++G+ + + ++ KH+ +
Sbjct: 711 PANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGART 770
Query: 85 TLERMRMN-GVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
E+ + GV+ +Y +I GL + ++E A + + PDV T++ L++ +
Sbjct: 771 LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY 830
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNT-YAVMNHSGHVSD 202
++GKI+ E+ +M N I ++ +I K N+ +AL+ Y +M+
Sbjct: 831 GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG--DALKAFFL 260
T L+ +SGRL EA+ + M G P+ + ++ +IN +G +G DA A F
Sbjct: 891 ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950
Query: 261 CLIK 264
++K
Sbjct: 951 RMVK 954
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 115/235 (48%), Gaps = 2/235 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNI-EEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+ P+ TYNTLI C +G++ +EA ++ +EM + G ++VTY ALL+ K +
Sbjct: 275 IAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
L M +NG ++Y ++I ++ +L+EA+ L + M + PDV T++ L++G
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
F RAGK+ +A I +M N ++ I Y E + + +N G D
Sbjct: 394 FERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
T N L+A F ++G E M R G P F+ +I++Y G +A
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 107/228 (46%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TYN+LI + G ++EA L ++M G KP+ TY LL+G + K S
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E MR G + ++ A I E + + D++ ++PD+VT++ L+ F +
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G + + +M + V ++TLI Y + + ++A+ Y M +G D T
Sbjct: 467 NGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
N ++A R G +++E + M P+ + ++++Y N +
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE 574
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 109/224 (48%), Gaps = 1/224 (0%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSK-HSKFGLVSSTLER 88
+Y +LI + G EA + +M G KP +TY +LN K + + ++S +E+
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
M+ +G+ +Y +I + L +EA + ++M A + D VT++ L++ + ++ +
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
A +++ +M + + Y++LI Y + L EA+ M G D FT
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
L++ F R+G+++ A + M G P+ F+ I YGN G
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRG 433
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 111/228 (48%), Gaps = 1/228 (0%)
Query: 26 PNCITYNTLIDGHCSKGN-IEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
P ITYN +++ G + L+++M S G+ P+ TY L+ + S +
Sbjct: 241 PTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQ 300
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
E M+ G ++Y A++D K+ +EA+ +L++M+ +P +VT++ LI+ +
Sbjct: 301 VFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA 360
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
R G ++ A E+ +M + + Y+TL+ + + ++ A++ + M ++G +
Sbjct: 361 RDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNIC 420
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
T N + + G+ E D ++ GL P ++ ++ +G +G
Sbjct: 421 TFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 119/272 (43%), Gaps = 37/272 (13%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ P+ TYNT++ G E++ ++L EM KPNE+TY +LL+ + + GL+
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI--- 140
S E + + + ++ K LL EA ++ + +PD+ T + ++
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY 639
Query: 141 ---------NGFL-----------------------RAGKINNAKEIMCKMYKTVLVLNN 168
NG L R+ ++EI+ ++ + +
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDI 699
Query: 169 ILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDH 228
I Y+T+IY YC+ +++A ++ M +SG V D T N + ++ +EA + +
Sbjct: 700 ISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRY 759
Query: 229 MSRMGLDPSTSAFDCIINSYG--NSGDALKAF 258
M + G P+ + ++ I++ Y N D K F
Sbjct: 760 MIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLF 791
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 106/263 (40%), Gaps = 35/263 (13%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN T+N I + ++G E ++ DE+ GL P+ VT+ LL ++ VS
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 476
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M+ G ++ +I + E+A+ + ML A + PD+ T++ ++ R
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRN---------------------- 183
G +++++ +M N + Y +L++ Y +
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL 596
Query: 184 -------------LKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMS 230
L EA ++ + G D T N +V+ + R + +A +D+M
Sbjct: 597 LKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK 656
Query: 231 RMGLDPSTSAFDCIINSYGNSGD 253
G PS + ++ ++ + S D
Sbjct: 657 ERGFTPSMATYNSLMYMHSRSAD 679
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
Query: 26 PNCITYNTLIDGHCSKGNI-EEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
P + TL+ CSK ++ EA R E+ G P+ T ++++ + +
Sbjct: 592 PRAVLLKTLV-LVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANG 650
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L+ M+ G +Y +++ ++ ++ +L ++L I PD+++++ +I +
Sbjct: 651 VLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYC 710
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
R ++ +A I +M + +V + I Y+T I +Y +EA+ M G +
Sbjct: 711 RNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQN 770
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDP 236
T N +V +C+ R EA+ F++ + LDP
Sbjct: 771 TYNSIVDGYCKLNRKDEAKLFVEDLR--NLDP 800
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 3/186 (1%)
Query: 69 LLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKAS 128
+++ L K + ++ ++ +G + SYT++I + EAV++ M +
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 129 INPDVVTFSVLINGFLRAG-KINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNL-KE 186
P ++T++V++N F + G N ++ KM + + Y+TLI CK +L +E
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQE 297
Query: 187 ALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
A + M +G D T N L+ + +S R KEA ++ M G PS ++ +I+
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 247 SYGNSG 252
+Y G
Sbjct: 358 AYARDG 363
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 120/231 (51%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N TY+ I+ C + + A +L +M+ G P+ VT +LLNG ++ + +
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
++M G + +++T ++ GL ++ EAV L++ M+ PD+VT+ +ING +
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G+ + A ++ KM K + + ++Y+T+I CK +++ +A + + M G D FT
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
N L++ C GR +A + M ++P F+ +I+++ G ++A
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 116/224 (51%), Gaps = 1/224 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T N+L++G C I EA L+D+MV G +P+ VT+ L++GL +H+K +
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 202
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ERM + G + ++Y A+I+GLCK + A++LL+ M K I DVV ++ +I+G +
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+++A ++ KM + + Y+ LI C +A + M D
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVF 322
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMG-LDPSTSAFDCIINSY 248
N L+ F + G+L EAE D M + P A++ +I +
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
P+ + YNTLI G C +EE + EM GL N VTY L++G +
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 412
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
++M +GV ++Y ++DGLC N +E A+ + + M K + D+VT++ +I
Sbjct: 413 VFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+AGK+ + ++ C + + N + Y+T++ +C+ +EA + M G + +
Sbjct: 473 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSG 532
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
T N L+ R G + + M G S F + N
Sbjct: 533 TYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTN 574
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 113/232 (48%), Gaps = 1/232 (0%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMV-SHGLKPNEVTYGALLNGLSKHSKFGL 81
N+ P+ + +N LID +G + EA +L DEMV S P+ V Y L+ G K+ +
Sbjct: 315 NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEE 374
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
M G+ ++YT +I G + R + A + M+ ++PD++T+++L++
Sbjct: 375 GMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
G G + A + M K + L+ + Y+T+I CK +++ + + ++ G
Sbjct: 435 GLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKP 494
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
+ T +++ FCR G +EA+ M G P++ ++ +I + GD
Sbjct: 495 NVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGD 546
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 102/218 (46%), Gaps = 3/218 (1%)
Query: 44 IEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTA 103
+++A L +MV P+ V + LL+ ++K +KF LV S E+M+ G+ +Y+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 104 MIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTV 163
I+ C+ L A+ +L M+K P +VT + L+NGF +I+ A ++ +M +
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 164 LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAE 223
+ + ++TL++ + EA+ M G D T ++ C+ G A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 224 YFMDHMSRMGLDPSTSAFDCIIN---SYGNSGDALKAF 258
++ M + ++ ++ II+ Y + DA F
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLF 273
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 64/147 (43%)
Query: 114 LEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYST 173
L++A+ L DM+K+ P +V FS L++ + K + + +M + N YS
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 174 LIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMG 233
I +C+ L AL M G+ T N L+ FC R+ EA +D M MG
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 234 LDPSTSAFDCIINSYGNSGDALKAFFL 260
P T F +++ A +A L
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVAL 202
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 115/257 (44%), Gaps = 36/257 (14%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TYNTLIDG C GN+E A RL +EM + + P+ +TY L+ G K+ + +
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 466
Query: 86 LERMRMNGVRVGHISYTAM------------------------------------IDGLC 109
+ M G++ +YT IDGLC
Sbjct: 467 YDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLC 526
Query: 110 KNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNI 169
K L +A+ + + + PD VT++ +I G+L G+ A+ + +M + L + I
Sbjct: 527 KVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVI 586
Query: 170 LYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHM 229
Y LIY + K L++A M G + T N L+ C++G + EA ++ M
Sbjct: 587 TYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM 646
Query: 230 SRMGLDPSTSAFDCIIN 246
G+ P+ ++ +I+
Sbjct: 647 EEEGIPPNKYSYTMLIS 663
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 113/230 (49%), Gaps = 4/230 (1%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
++P IT+NT++D G++E ++ EM ++ +EVTY L+NG SK+ K
Sbjct: 234 IMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEAR 293
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
MR +G V S+ +I+G CK L ++A + D+ML A I P T+++ I
Sbjct: 294 RFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICAL 353
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
G+I++A+E++ M +V Y+TL++ Y KM EA + +
Sbjct: 354 CDFGRIDDARELLSSMAAPDVV----SYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSI 409
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
T N L+ C SG L+ A+ + M+ + P + ++ + +G+
Sbjct: 410 VTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGN 459
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 5/231 (2%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ P TYN I C G I++A LL M + P+ V+Y L++G K KF S
Sbjct: 339 IYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEAS 394
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ +R + ++Y +IDGLC++ LE A L ++M I PDV+T++ L+ GF
Sbjct: 395 LLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF 454
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
++ G ++ A E+ +M + + + Y+T ++ + +A + M + H +
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD 514
Query: 204 FTC-NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
T NV + C+ G L +A F + R+GL P + +I Y +G
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQ 565
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 113/250 (45%), Gaps = 38/250 (15%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTY-----GALLNGLSKHSK 78
+ P+ ITY TL+ G GN+ A + DEM+ G+KP+ Y G L G S +
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKA- 498
Query: 79 FGLVSS-----------TLERMRMNGV-----------------RVG----HISYTAMID 106
F L T+ +R++G+ RVG H++YT +I
Sbjct: 499 FRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIR 558
Query: 107 GLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVL 166
G +N + A +L D+ML+ + P V+T+ VLI G +AG++ A + +M K +
Sbjct: 559 GYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRP 618
Query: 167 NNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFM 226
N + ++ L+Y CK N+ EA M G + ++ +L++ C + +E
Sbjct: 619 NVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLY 678
Query: 227 DHMSRMGLDP 236
M ++P
Sbjct: 679 KEMLDKEIEP 688
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ YN IDG C GN+ +A ++ GL P+ VTY ++ G ++ +F + +
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M + I+Y +I G K LE+A +M K + P+V+T + L+ G +
Sbjct: 573 YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK 632
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AG I+ A +CKM + + N Y+ LI C +E + Y M D +T
Sbjct: 633 AGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYT 692
Query: 206 CNVLVATFCRSGRLKEAEY 224
L + +E E+
Sbjct: 693 HRALFKHLEKDHESREVEF 711
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 56/118 (47%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ ITY LI GH G +E+AF+ EM G++PN +T+ ALL G+ K
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAY 640
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
L +M G+ SYT +I C EE V L +ML I PD T L
Sbjct: 641 RYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFK 698
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 5/222 (2%)
Query: 40 SKGNIEEAFRL-LDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGH 98
+K ++ E F L ++M+ G P+ +L L S+ E M +G+
Sbjct: 179 TKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTV 238
Query: 99 ISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCK 158
I++ M+D K LE + +M + +I VT+++LINGF + GK+ A+
Sbjct: 239 ITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGD 298
Query: 159 MYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGR 218
M ++ + ++ LI YCK +A M ++G T N+ + C GR
Sbjct: 299 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR 358
Query: 219 LKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+ +A + M+ P +++ +++ Y G ++A L
Sbjct: 359 IDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLL 396
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 117/233 (50%), Gaps = 12/233 (5%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY +++G C G +++A +LL M +HG KPN V+Y ALLNG+ + K +
Sbjct: 452 PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK------S 505
Query: 86 LERMRMNGVRVGH------ISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
LE M + H I+Y+ ++ GL + L EA ++ +M+ P V ++L
Sbjct: 506 LEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLL 565
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
+ R G+ + A++ M + +N + ++T+I+ +C+ L AL+ M
Sbjct: 566 LQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINK 625
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+D FT LV T + GR+ EA M M G+DP+ + +I+ Y G
Sbjct: 626 HADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMG 678
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 127/281 (45%), Gaps = 40/281 (14%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVS--------------------------- 56
++PN +TYN +I G+C +EEA LL++M S
Sbjct: 308 IVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVR 367
Query: 57 ---------HGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDG 107
HGL P++VTY L++ L+KH L+ + G R+ + Y+A++
Sbjct: 368 DLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHA 427
Query: 108 LCKNRLLEEAVHLLDDML-KASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVL 166
LCK + EA L+++ML K PDVVT++ ++NGF R G+++ AK+++ M+
Sbjct: 428 LCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKP 487
Query: 167 NNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFM 226
N + Y+ L+ C+ EA + + T +V++ R G+L EA +
Sbjct: 488 NTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVV 547
Query: 227 DHMSRMGLDPSTSAFDCIINSY---GNSGDALKAFFLCLIK 264
M G P + ++ S G + +A K CL K
Sbjct: 548 REMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNK 588
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 2/233 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN ITY+ ++ G +G + EA ++ EMV G P V LL L + +
Sbjct: 522 PNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKF 581
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+E G + +++T +I G C+N L+ A+ +LDDM + + DV T++ L++ +
Sbjct: 582 MEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGK 641
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G+I A E+M KM + + Y T+I+ YC+M + + + M +
Sbjct: 642 KGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIY- 700
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
N ++ C G+L+EA+ + + R ++ Y G L A+
Sbjct: 701 -NQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAY 752
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 106/234 (45%), Gaps = 2/234 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN + NT ID +E+A R L+ M G+ PN VTY ++ G +
Sbjct: 275 PNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIEL 334
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKA-SINPDVVTFSVLINGFL 144
LE M G +SY ++ LCK + + E L+ M K + PD VT++ LI+
Sbjct: 335 LEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLT 394
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH-VSDH 203
+ + A + + ++ + YS +++ CK + EA + M GH D
Sbjct: 395 KHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDV 454
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
T +V FCR G + +A+ + M G P+T ++ ++N +G +L+A
Sbjct: 455 VTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEA 508
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 109/230 (47%), Gaps = 2/230 (0%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
++ ++ + G + +A ++L M G++PN + ++ + ++ LERM
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
++ G+ ++Y MI G C +EEA+ LL+DM PD V++ ++ + +I
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363
Query: 150 NNAKEIMCKMYKT-VLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
+++M KM K LV + + Y+TLI+ K + EAL G D +
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSA 423
Query: 209 LVATFCRSGRLKEAEYFMDHM-SRMGLDPSTSAFDCIINSYGNSGDALKA 257
+V C+ GR+ EA+ ++ M S+ P + ++N + G+ KA
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKA 473
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 2/177 (1%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ TY TL+D KG I EA L+ +M+ G+ P VTY +++ + K + + L
Sbjct: 628 DVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAIL 687
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
E+M ++ + I Y +I+ LC LEEA LL +L+ + D T L+ G+L+
Sbjct: 688 EKM-ISRQKCRTI-YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKK 745
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
G +A ++ C+M+ L+ + + L + EA + GH+S
Sbjct: 746 GVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQ 802
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 83/205 (40%), Gaps = 1/205 (0%)
Query: 49 RLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGL 108
R+L M G+ + ++ S+ + L M+ GV + ID
Sbjct: 228 RVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVF 287
Query: 109 CKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNN 168
+ LE+A+ L+ M I P+VVT++ +I G+ ++ A E++ M+ + +
Sbjct: 288 VRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDK 347
Query: 169 ILYSTLIYNYCKMRNLKEALNTYAVM-NHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMD 227
+ Y T++ CK + + E + M G V D T N L+ + EA +F+
Sbjct: 348 VSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLK 407
Query: 228 HMSRMGLDPSTSAFDCIINSYGNSG 252
G + I+++ G
Sbjct: 408 DAQEKGFRIDKLGYSAIVHALCKEG 432
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 123/258 (47%), Gaps = 38/258 (14%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
++P+ I Y TLIDG+C +G + +A L+DEM+ +G+ P+ +TY L++GL+++ V
Sbjct: 419 IVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVL 478
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDM------------------- 124
ERM+ G + ++ + +I+GLC R ++EA +
Sbjct: 479 EIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAG 538
Query: 125 -----------LKASINPDV---VTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNIL 170
L+ + V + FS+ I G+L A +++ KM + +
Sbjct: 539 LSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYL-----EKAHDVLKKMSAYRVEPGRSM 593
Query: 171 YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMS 230
+I +CK+ N++EA + M G + D FT +++ T+CR L++AE + M
Sbjct: 594 CGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMK 653
Query: 231 RMGLDPSTSAFDCIINSY 248
+ G+ P + +++ Y
Sbjct: 654 QRGIKPDVVTYTVLLDRY 671
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 12/230 (5%)
Query: 33 TLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR-- 90
+ID +C N+ EA LD+M+ GLK N V +L + K + LE+ +
Sbjct: 323 AVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQC---YCKMDMCLEALEKFKEF 379
Query: 91 --MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
MN + + + Y D L K +EEA LL +M I PDV+ ++ LI+G+ GK
Sbjct: 380 RDMN-IFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGK 438
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
+ +A +++ +M + + I Y+ L+ + + +E L Y M G + T +V
Sbjct: 439 VVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSV 498
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
++ C + ++KEAE F + + + S + Y +G + KA+
Sbjct: 499 IIEGLCFARKVKEAEDFFSSLEQKCPENKAS----FVKGYCEAGLSKKAY 544
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 14/231 (6%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
Y L C +G +E+A +L +M ++ ++P G ++ K + + M
Sbjct: 558 VYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTM 617
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR---- 145
G+ +YT MI C+ L++A L +DM + I PDVVT++VL++ +L+
Sbjct: 618 VERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPE 677
Query: 146 -------AGKI--NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNH 196
G++ A E++ + + L+ + Y+ LI CKM NL++A + M
Sbjct: 678 HHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMID 737
Query: 197 SGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
SG D L++++ R G + A + +S+ PS S F+ + S
Sbjct: 738 SGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSES-FEAAVKS 787
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSK-------- 75
L+P+ TY +I +C +++A L ++M G+KP+ VTY LL+ K
Sbjct: 622 LIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHET 681
Query: 76 ---HSKFG--LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASIN 130
+ G S L G+ + + YT +ID CK LE+A L D M+ + +
Sbjct: 682 CSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLE 741
Query: 131 PDVVTFSVLINGFLRAGKINNAKEIMCKMYK 161
PD+V ++ LI+ + R G I+ A ++ ++ K
Sbjct: 742 PDMVAYTTLISSYFRKGYIDMAVTLVTELSK 772
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 92/225 (40%), Gaps = 3/225 (1%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNE---VTYGALLNGLSKHSKFGLVSSTLE 87
Y T I+G C G E+A L+ E++ + G ++ G K S +
Sbjct: 248 YKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVII 307
Query: 88 RMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAG 147
M G + + A+ID CKN L EA+ LD ML + + V S+++ + +
Sbjct: 308 EMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMD 367
Query: 148 KINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCN 207
A E + + L+ + Y+ K+ ++EA M G V D
Sbjct: 368 MCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYT 427
Query: 208 VLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
L+ +C G++ +A +D M G+ P ++ +++ +G
Sbjct: 428 TLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNG 472
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 98/246 (39%), Gaps = 15/246 (6%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYG--ALLNGL----S 74
L N TY ++ C KGN+EEA LL E NE +G +NGL
Sbjct: 209 QLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE--------NESVFGYKTFINGLCVTGE 260
Query: 75 KHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVV 134
L+ ++R + G + + ++ G C ++ A ++ +M + DV
Sbjct: 261 TEKAVALILELIDRKYLAGDDLRAV-LGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVY 319
Query: 135 TFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVM 194
+I+ + + + A + KM L +N ++ S ++ YCKM EAL +
Sbjct: 320 ACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEF 379
Query: 195 NHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDA 254
D NV + GR++EA + M G+ P + +I+ Y G
Sbjct: 380 RDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKV 439
Query: 255 LKAFFL 260
+ A L
Sbjct: 440 VDALDL 445
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 80/183 (43%), Gaps = 9/183 (4%)
Query: 69 LLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKAS 128
L+N +++ K G++ + ++++ G+ +Y ++ LC+ LEEA LL +
Sbjct: 187 LMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE----- 241
Query: 129 INPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTL---IYNYCKMRNLK 185
N V + ING G+ A ++ ++ + + L + L + +C +K
Sbjct: 242 -NESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMK 300
Query: 186 EALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
A + M G D + C ++ +C++ L EA F+D M GL + I+
Sbjct: 301 AAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLIL 360
Query: 246 NSY 248
Y
Sbjct: 361 QCY 363
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
LL + +YN +ID C IE A L EM G+ PN VT+ L+G S V
Sbjct: 421 LLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVH 480
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
LE++ ++G + I+++ +I+ LC+ + +++A +ML+ I P+ +T+++LI
Sbjct: 481 GVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSC 540
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
G + + ++ KM + L + Y+ I ++CKMR +K+A M G D+
Sbjct: 541 CSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDN 600
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPST 238
FT + L+ SGR EA + R G P +
Sbjct: 601 FTYSTLIKALSESGRESEAREMFSSIERHGCVPDS 635
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 43/272 (15%)
Query: 25 LPNCITYNT----LIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
+P+ T+N L+ GH ++ E R+ D VS G+KP Y L+ L +F
Sbjct: 352 IPDSSTFNAAMSCLLKGH----DLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFS 407
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASIN---------- 130
L++M ++G+ SY A+ID LCK R +E A L +M I+
Sbjct: 408 EGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFL 467
Query: 131 -------------------------PDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLV 165
PDV+TFS++IN RA +I +A + +M + +
Sbjct: 468 SGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE 527
Query: 166 LNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYF 225
N I Y+ LI + C + ++ +A M +G D + N + +FC+ ++K+AE
Sbjct: 528 PNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEEL 587
Query: 226 MDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ M R+GL P + +I + SG +A
Sbjct: 588 LKTMLRIGLKPDNFTYSTLIKALSESGRESEA 619
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +T+NT + G+ +G++++ +L++++ HG KP+ +T+ ++N L + +
Sbjct: 458 PNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDC 517
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M G+ I+Y +I C + +V L M + ++PD+ ++ I F +
Sbjct: 518 FKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCK 577
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
K+ A+E++ M + L +N YSTLI + EA ++ + G V D +T
Sbjct: 578 MRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 58/95 (61%)
Query: 58 GLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEA 117
G+KP+ Y A+++ L K + L ++MR +G + +Y +I G+CK +++EA
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 118 VHLLDDMLKASINPDVVTFSVLINGFLRAGKINNA 152
+ L+ M + P+V T+++LI+GFL AG+++ A
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA 269
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 93/226 (41%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ YN +ID +++ A+ +M S G KP+ TY L++G+ K
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+++M G R +YT +IDG ++EA+ L+ M +NP+ T ++G R
Sbjct: 238 VKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFR 297
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A E++ + L + Y ++Y KE + G++ D T
Sbjct: 298 CLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSST 357
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS 251
N ++ + L E D G+ P + + ++ + N+
Sbjct: 358 FNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNA 403
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 100/266 (37%), Gaps = 35/266 (13%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TYN LI G C KG ++EA RL+ +M G +PN TY L++G +
Sbjct: 213 PDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQ 272
Query: 86 LERMRMNG--------------------------VRVG---------HISYTAMIDGLCK 110
LE MR+ V VG + Y A++ L
Sbjct: 273 LEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSN 332
Query: 111 NRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNIL 170
N + +E L + + PD TF+ ++ L+ + I +
Sbjct: 333 NSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNG 392
Query: 171 YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMS 230
Y L+ + E M G +S ++ N ++ C++ R++ A F+ M
Sbjct: 393 YLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQ 452
Query: 231 RMGLDPSTSAFDCIINSYGNSGDALK 256
G+ P+ F+ ++ Y GD K
Sbjct: 453 DRGISPNLVTFNTFLSGYSVRGDVKK 478
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 117/236 (49%), Gaps = 3/236 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TYN LI+ C +G E A LDE GL PN ++Y L+ K ++ + S
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L +M G + ++Y +I GL + +++AV++ ++ ++PD +++L++G +
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G+ AK + +M ++ + +Y+TLI + + + EA +++ G D
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD---ALKAF 258
N ++ FCRSG L EA M+ M+ L P + II+ Y D A+K F
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+PN ++Y LI +C + A +LL +M G KP+ VTYG L++GL
Sbjct: 376 LIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAV 435
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ ++ GV Y ++ GLCK A L +ML +I PD ++ LI+GF
Sbjct: 436 NMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF 495
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+R+G + A+++ + + ++ + ++ +I +C+ L EAL MN V D
Sbjct: 496 IRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDK 555
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
FT + ++ + + + A +M + P+ + +IN + GD
Sbjct: 556 FTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGD 605
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 119/278 (42%), Gaps = 38/278 (13%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
+PN + YNT+I G+C G+IE A+ + E+ G P T+G ++NG K F
Sbjct: 237 IPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDR 296
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L ++ G+RV +ID ++ + + ++ PDV T+++LIN
Sbjct: 297 LLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLC 356
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKM---------------RNLKEALN 189
+ GK A + + K L+ NN+ Y+ LI YCK R K +
Sbjct: 357 KEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIV 416
Query: 190 TYAVMNH----SGHVSDHFTC----------------NVLVATFCRSGRLKEAEYFMDHM 229
TY ++ H SGH+ D N+L++ C++GR A+ M
Sbjct: 417 TYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEM 476
Query: 230 SRMGLDPSTSAFDCIINSYGNSGD---ALKAFFLCLIK 264
+ P + +I+ + SGD A K F L + K
Sbjct: 477 LDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEK 514
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 1/224 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ YN L+ G C G A L EM+ + P+ Y L++G + F
Sbjct: 448 PDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
GV+V + + AMI G C++ +L+EA+ ++ M + + PD T+S +I+G+++
Sbjct: 508 FSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+ A +I M K N + Y++LI +C + K A T+ M V + T
Sbjct: 568 QQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVT 627
Query: 206 CNVLVATFCR-SGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
L+ + + S L++A Y+ + M P+ F+C++ +
Sbjct: 628 YTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGF 671
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 103/231 (44%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY LI G G++++A + +++ G+ P+ Y L++GL K +F
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M + Y +IDG ++ +EA + ++ + DVV + +I GF R
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCR 532
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+G ++ A M +M + LV + YST+I Y K +++ A+ + M + + T
Sbjct: 533 SGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVT 592
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALK 256
L+ FC G K AE M L P+ + +I S L+
Sbjct: 593 YTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLE 643
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 3/200 (1%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N+LP+ Y TLIDG G+ +EA ++ V G+K + V + A++ G +
Sbjct: 480 NILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEA 539
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ + RM + +Y+ +IDG K + + A+ + M K P+VVT++ LING
Sbjct: 540 LACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLING 599
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRN-LKEALNTYAVMNHSGHVS 201
F G A+E +M LV N + Y+TLI + K + L++A+ + +M + V
Sbjct: 600 FCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVP 659
Query: 202 DHFTCNVLVATFCR--SGRL 219
+ T N L+ F + SG++
Sbjct: 660 NEVTFNCLLQGFVKKTSGKV 679
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 15/140 (10%)
Query: 23 NLLPNCITYNTLIDGHCSKGN-IEEAFRLLDEMVSHGLKPNEVTYGALLNGLSK------ 75
+L+PN +TY TLI + + +E+A + M+++ PNEVT+ LL G K
Sbjct: 620 DLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKV 679
Query: 76 --------HSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKA 127
H + L S RM+ +G +Y + + LC + +++ A D M+K
Sbjct: 680 LAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKK 739
Query: 128 SINPDVVTFSVLINGFLRAG 147
+PD V+F+ +++GF G
Sbjct: 740 GFSPDPVSFAAILHGFCVVG 759
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 106/237 (44%), Gaps = 10/237 (4%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
++ +P+ I N+L+ + +A ++ DEM G + + L+ G+ K +
Sbjct: 164 YDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEV 223
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
+E G + Y +I G CK +E A + ++ P + TF +IN
Sbjct: 224 GRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMIN 283
Query: 142 GFLRAGKINNAKEIMCKMYK-----TVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNH 196
GF + G + ++ ++ + +V LNNI+ + + Y + E++ + + N
Sbjct: 284 GFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGY--KVDPAESIG-WIIAND 340
Query: 197 SGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
D T N+L+ C+ G+ + A F+D S+ GL P+ ++ +I +Y S +
Sbjct: 341 CK--PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE 395
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 119/232 (51%), Gaps = 1/232 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTY-GALLNGLSKHSKFGLV 82
L P+ ITY L+ G C GNI+ LL +M+S G + N + +L+GL K +
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
S +M+ +G+ ++Y+ +I GLCK + A+ L D+M I P+ T L+ G
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+ G + A+ ++ + + L+ +LY+ +I Y K ++EAL + V+ +G
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDA 254
T N L+ +C++ + EA +D + GL PS ++ ++++Y N G+
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 554
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 109/220 (49%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
L + I + ++ G C G I+EA L ++M + GL P+ V Y +++GL K KF +
Sbjct: 360 LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW 419
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
+ M + ++ A++ GLC+ +L EA LLD ++ + D+V ++++I+G+
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
++G I A E+ + +T + + +++LIY YCK +N+ EA V+ G
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 539
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCI 244
+ L+ + G K + M G+ P+ + I
Sbjct: 540 SYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 112/232 (48%), Gaps = 1/232 (0%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TY+T++DG C + +E+A L + P+ V++ ++++G K + S +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
G+ S+ +I+GLC + EA+ L DM K + PD VT+++L GF G I
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG-HVSDHFTCNV 208
+ A E++ M L + I Y+ L+ C++ N+ L M G ++ C+V
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+++ C++GR+ EA + M GL P A+ +I+ G A +L
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 420
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 15/247 (6%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ + YN +IDG+ G IEEA L ++ G+ P+ T+ +L+ G K L
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+ +++ G+ +SYT ++D + L +M I P VT+SV+ G R
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRG 586
Query: 147 GKINNAKEIM-------CK-----MYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVM 194
K N ++ CK M + + I Y+T+I C++++L A +M
Sbjct: 587 WKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM 646
Query: 195 NHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD- 253
+ T N+L+ + C G +++A+ F+ + + S A+ +I ++ GD
Sbjct: 647 KSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDP 706
Query: 254 --ALKAF 258
A+K F
Sbjct: 707 EMAVKLF 713
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 114/271 (42%), Gaps = 47/271 (17%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ + Y+ +I G C G + A L DEM + PN T+GALL GL +
Sbjct: 394 LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEAR 453
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
S L+ + +G + + Y +IDG K+ +EEA+ L +++ I P V TF+ LI G+
Sbjct: 454 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGY 513
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLK-----------EALN--- 189
+ I A++I+ + L + + Y+TL+ Y N K E +
Sbjct: 514 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTN 573
Query: 190 -TYAV--------------------------------MNHSGHVSDHFTCNVLVATFCRS 216
TY+V M G D T N ++ CR
Sbjct: 574 VTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRV 633
Query: 217 GRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
L A F++ M LD S++ ++ +I+S
Sbjct: 634 KHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 12/189 (6%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSK--- 78
+ L P+ ++Y TL+D + + GN + L EM + G+ P VTY + GL + K
Sbjct: 532 YGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHEN 591
Query: 79 ---------FGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASI 129
F L M G+ I+Y +I LC+ + L A L+ M ++
Sbjct: 592 CNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNL 651
Query: 130 NPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALN 189
+ T+++LI+ G I A + + + + L+ Y+TLI +C + + A+
Sbjct: 652 DASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVK 711
Query: 190 TYAVMNHSG 198
+ + H G
Sbjct: 712 LFHQLLHRG 720
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ ITYNT+I C ++ AF L+ M S L + TY L++ L + S
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF 677
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ ++ V + +YT +I C E AV L +L N + +S +IN R
Sbjct: 678 IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Query: 146 AGKIN 150
+N
Sbjct: 738 RHLMN 742
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 119/232 (51%), Gaps = 1/232 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTY-GALLNGLSKHSKFGLV 82
L P+ ITY L+ G C GNI+ LL +M+S G + N + +L+GL K +
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
S +M+ +G+ ++Y+ +I GLCK + A+ L D+M I P+ T L+ G
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+ G + A+ ++ + + L+ +LY+ +I Y K ++EAL + V+ +G
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDA 254
T N L+ +C++ + EA +D + GL PS ++ ++++Y N G+
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 554
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 109/220 (49%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
L + I + ++ G C G I+EA L ++M + GL P+ V Y +++GL K KF +
Sbjct: 360 LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW 419
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
+ M + ++ A++ GLC+ +L EA LLD ++ + D+V ++++I+G+
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
++G I A E+ + +T + + +++LIY YCK +N+ EA V+ G
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 539
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCI 244
+ L+ + G K + M G+ P+ + I
Sbjct: 540 SYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 579
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 112/232 (48%), Gaps = 1/232 (0%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TY+T++DG C + +E+A L + P+ V++ ++++G K + S +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
G+ S+ +I+GLC + EA+ L DM K + PD VT+++L GF G I
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG-HVSDHFTCNV 208
+ A E++ M L + I Y+ L+ C++ N+ L M G ++ C+V
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+++ C++GR+ EA + M GL P A+ +I+ G A +L
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWL 420
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 111/247 (44%), Gaps = 15/247 (6%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ + YN +IDG+ G IEEA L ++ G+ P+ T+ +L+ G K L
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+ +++ G+ +SYT ++D + L +M I P VT+SV+ G R
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRG 586
Query: 147 GKINNAKEIM-------CK-----MYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVM 194
K N ++ CK M + + I Y+T+I C++++L A +M
Sbjct: 587 WKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIM 646
Query: 195 NHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD- 253
+ T N+L+ + C G +++A+ F+ + + S A+ +I ++ GD
Sbjct: 647 KSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDP 706
Query: 254 --ALKAF 258
A+K F
Sbjct: 707 EMAVKLF 713
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 114/271 (42%), Gaps = 47/271 (17%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ + Y+ +I G C G + A L DEM + PN T+GALL GL +
Sbjct: 394 LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEAR 453
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
S L+ + +G + + Y +IDG K+ +EEA+ L +++ I P V TF+ LI G+
Sbjct: 454 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGY 513
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLK-----------EALN--- 189
+ I A++I+ + L + + Y+TL+ Y N K E +
Sbjct: 514 CKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTN 573
Query: 190 -TYAV--------------------------------MNHSGHVSDHFTCNVLVATFCRS 216
TY+V M G D T N ++ CR
Sbjct: 574 VTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRV 633
Query: 217 GRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
L A F++ M LD S++ ++ +I+S
Sbjct: 634 KHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 12/189 (6%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSK--- 78
+ L P+ ++Y TL+D + + GN + L EM + G+ P VTY + GL + K
Sbjct: 532 YGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHEN 591
Query: 79 ---------FGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASI 129
F L M G+ I+Y +I LC+ + L A L+ M ++
Sbjct: 592 CNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNL 651
Query: 130 NPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALN 189
+ T+++LI+ G I A + + + + L+ Y+TLI +C + + A+
Sbjct: 652 DASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVK 711
Query: 190 TYAVMNHSG 198
+ + H G
Sbjct: 712 LFHQLLHRG 720
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ ITYNT+I C ++ AF L+ M S L + TY L++ L + S
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF 677
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ ++ V + +YT +I C E AV L +L N + +S +IN R
Sbjct: 678 IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Query: 146 AGKIN 150
+N
Sbjct: 738 RHLMN 742
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 114/223 (51%), Gaps = 4/223 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN ITYN ++ G C G +E+A L + + + + +Y L GL +H KF +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L++M G+ SY ++DGLCK +L +A ++ M + + PD VT+ L++G+
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK++ AK ++ +M + + N + L+++ KM + EA MN G+ D T
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
CN++V C SG L +A + M G ++A + NSY
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHG----SAALGNLGNSY 507
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 126/277 (45%), Gaps = 39/277 (14%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
SF +LPN + YNT++ C +G +++ +++++M GL P+ VT+ + ++ L K K
Sbjct: 210 SFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVL 269
Query: 81 LVSSTLERMRMNG----VRVGHISYTAMIDGLCKNRLLE--------------------- 115
S M ++ R I+Y M+ G CK LLE
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSY 329
Query: 116 --------------EAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYK 161
EA +L M I P + ++++L++G + G +++AK I+ M +
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR 389
Query: 162 TVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKE 221
+ + + Y L++ YC + + A + M + + + +TCN+L+ + + GR+ E
Sbjct: 390 NGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISE 449
Query: 222 AEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
AE + M+ G T + I++ SG+ KA
Sbjct: 450 AEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 10/230 (4%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ P T+N LI C ++ A L DEM G KPNE T+G L+ G + K GL
Sbjct: 143 IAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRG---YCKAGLTD 199
Query: 84 STLE---RMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
LE M GV + Y ++ C+ +++ +++ M + + PD+VTF+ I
Sbjct: 200 KGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRI 259
Query: 141 NGFLRAGKINNAKEIMCKM----YKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNH 196
+ + GK+ +A I M Y + N+I Y+ ++ +CK+ L++A + +
Sbjct: 260 SALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319
Query: 197 SGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
+ ++ + N+ + R G+ EAE + M+ G+ PS +++ +++
Sbjct: 320 NDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMD 369
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 109/244 (44%), Gaps = 23/244 (9%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY L+ G+CS G ++ A LL EM+ + PN T LL+ L K +
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEEL 453
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLL-----------------------D 122
L +M G + ++ ++DGLC + L++A+ ++ D
Sbjct: 454 LRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDD 513
Query: 123 DMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMR 182
+++ + PD++T+S L+NG +AG+ AK + +M L +++ Y+ I+++CK
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQG 573
Query: 183 NLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFD 242
+ A M G T N L+ ++ E MD M G+ P+ ++
Sbjct: 574 KISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYN 633
Query: 243 CIIN 246
I
Sbjct: 634 TAIQ 637
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 100/244 (40%), Gaps = 34/244 (13%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ + YN I C +G I AFR+L +M G + TY +L+ GL ++ +
Sbjct: 555 LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIH 614
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
++ M+ G+ +Y I LC+ +E+A +LLD+M++ +I P+V +F LI F
Sbjct: 615 GLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Query: 144 ----------------------------------LRAGKINNAKEIMCKMYKTVLVLNNI 169
L AG++ A E++ + L
Sbjct: 675 CKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTF 734
Query: 170 LYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHM 229
LY L+ + CK L+ A M G+ D ++ + G KEA F D M
Sbjct: 735 LYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794
Query: 230 SRMG 233
M
Sbjct: 795 MEMA 798
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 106/247 (42%), Gaps = 23/247 (9%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +YN L+DG C G + +A ++ M +G+ P+ VTYG LL+G K S
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L+ M N + ++ L K + EA LL M + D VT +++++G
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 146 AGKINNAKEIMCKM------------------YKTVLVLNN-----ILYSTLIYNYCKMR 182
+G+++ A EI+ M L+ NN I YSTL+ CK
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 183 NLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFD 242
EA N +A M D N+ + FC+ G++ A + M + G S ++
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598
Query: 243 CIINSYG 249
+I G
Sbjct: 599 SLILGLG 605
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 23/252 (9%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
+YN + G G EA +L +M G+ P+ +Y L++GL K + + M
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ NGV ++Y ++ G C ++ A LL +M++ + P+ T ++L++ + G+I
Sbjct: 388 KRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRI 447
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS-------- 201
+ A+E++ KM + L+ + + ++ C L +A+ M G +
Sbjct: 448 SEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSY 507
Query: 202 ---------------DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
D T + L+ C++GR EA+ M L P + A++ I+
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIH 567
Query: 247 SYGNSGDALKAF 258
+ G AF
Sbjct: 568 HFCKQGKISSAF 579
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 110/270 (40%), Gaps = 36/270 (13%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEV------------------ 64
N LP+ ITY+TL++G C G EA L EM+ L+P+ V
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSA 578
Query: 65 -----------------TYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDG 107
TY +L+ GL ++ + ++ M+ G+ +Y I
Sbjct: 579 FRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQY 638
Query: 108 LCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLN 167
LC+ +E+A +LLD+M++ +I P+V +F LI F + + A+E+ + ++
Sbjct: 639 LCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQK 697
Query: 168 NILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMD 227
LYS + L +A + G F LV + C+ L+ A +
Sbjct: 698 EGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILH 757
Query: 228 HMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
M G +A +I+ G G+ +A
Sbjct: 758 KMIDRGYGFDPAALMPVIDGLGKMGNKKEA 787
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 79/171 (46%)
Query: 60 KPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVH 119
KP+ Y LL K + VS + M + G+ ++ +I LC + ++ A
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 120 LLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYC 179
L D+M + P+ TF +L+ G+ +AG + E++ M ++ N ++Y+T++ ++C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 180 KMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMS 230
+ ++ M G V D T N ++ C+ G++ +A M
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%)
Query: 101 YTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMY 160
Y +++ K R +E L DM+ I P TF++LI + ++ A+E+ +M
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 161 KTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLK 220
+ N + L+ YCK + L M G + + N +V++FCR GR
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRND 234
Query: 221 EAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
++E ++ M GL P F+ I++ G L A
Sbjct: 235 DSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDA 271
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 86/212 (40%), Gaps = 23/212 (10%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLK-----------------------PNE 63
+ +T N ++DG C G +++A ++ M HG P+
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDL 524
Query: 64 VTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDD 123
+TY LLNGL K +F + M ++ ++Y I CK + A +L D
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKD 584
Query: 124 MLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRN 183
M K + + T++ LI G +I +M +M + + N Y+T I C+
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEK 644
Query: 184 LKEALNTYAVMNHSGHVSDHFTCNVLVATFCR 215
+++A N M + F+ L+ FC+
Sbjct: 645 VEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 108 bits (271), Expect = 3e-24, Method: Composition-based stats.
Identities = 64/229 (27%), Positives = 110/229 (48%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TY T++ E +LLDEMV G KPN VTY L++ + + + +M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ G ++Y +ID K L+ A+ + M +A ++PD T+SV+IN +AG +
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A + C+M N + ++ +I + K RN + AL Y M ++G D T +++
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
+ G L+EAE M R P + +++ +G +G+ KA+
Sbjct: 541 MEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAW 589
Score = 99.0 bits (245), Expect = 3e-21, Method: Composition-based stats.
Identities = 63/221 (28%), Positives = 101/221 (45%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY TLID H G ++ A + M GL P+ TY ++N L K
Sbjct: 427 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRL 486
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M G +++ MI K R E A+ L DM A PD VT+S+++
Sbjct: 487 FCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGH 546
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G + A+ + +M + V + +Y L+ + K N+ +A Y M +G + T
Sbjct: 547 CGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPT 606
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
CN L++TF R R+ EA + M +GL PS + +++
Sbjct: 607 CNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 67.4 bits (163), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Query: 97 GHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIM 156
GH +YT M+ L + + E LLD+M++ P+ VT++ LI+ + RA + A +
Sbjct: 359 GH-TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 157 CKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRS 216
+M + + + Y TLI + K L A++ Y M +G D FT +V++ ++
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 217 GRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
G L A M G P+ F+ +I
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMI 506
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 118/265 (44%), Gaps = 37/265 (13%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN TY LIDG C G +EA +LL+ M+ +PN VTY ++N L K
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKAS--INPDVVTFSVLINGF 143
+E M+ R +I+Y ++ GLC L+EA LL MLK S +PDV++++ LI+G
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Query: 144 -----------------------------------LRAGKINNAKEIMCKMYKTVLVLNN 168
L+AG +N A E+ ++ + +V N+
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Query: 169 ILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDH 228
Y+ +I +CK L A M S F N L+++ C+ G L +A +
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554
Query: 229 MSRMGLDPSTSAFDCIINSYGNSGD 253
M R P +F+ +I+ +GD
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGD 579
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+L+P+ +YNT+I G C +E+A L +EM G + VT+G L++ K K
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
L+ M+ G+ + YT++I G C L+ L D++L+ +P +T++ LI G
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
F + G++ A EI M + + N Y+ LI C + KEAL +M +
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
T N+++ C+ G + +A ++ M + P ++ ++ GD
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 4/240 (1%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L + + Y +LI G C G ++ L DE++ G P +TY L+ G K + S
Sbjct: 243 LEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEAS 302
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
E M GVR +YT +IDGLC +EA+ LL+ M++ P+ VT++++IN
Sbjct: 303 EIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALN-TYAVMNHSGHVS- 201
+ G + +A EI+ M K +NI Y+ L+ C +L EA Y ++ S +
Sbjct: 363 CKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDP 422
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHM-SRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
D + N L+ C+ RL +A D + ++G + + ++NS +GD KA L
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT-NILLNSTLKAGDVNKAMEL 481
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%)
Query: 47 AFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMID 106
AF +L M+ G N + LL GL ++ + G S L MR N + SY +I
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 107 GLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVL 166
G C+ + LE+A+ L ++M + + +VT+ +LI+ F +AGK++ A + +M L
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245
Query: 167 NNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFM 226
+ ++Y++LI +C L + + G T N L+ FC+ G+LKEA
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 227 DHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+ M G+ P+ + +I+ G +A L
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
+T N L++ G++ +A L ++ + N TY A+++G K + L +
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
MR++ ++ Y ++ LCK L++A L ++M + + PDVV+F+++I+G L+AG
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
I +A+ ++ M + L + YS LI + K+ L EA++ + M SG D C+
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 209 LVATFCRS 216
V +C S
Sbjct: 640 -VLKYCIS 646
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 123/268 (45%), Gaps = 37/268 (13%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMV--SHGLKPNEVTYGALLNGLSKH------- 76
P+ ITYN L+ G C+KG+++EA +LL M+ S P+ ++Y AL++GL K
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444
Query: 77 -------SKFG---------LVSSTLERMRMNG------------VRVGHISYTAMIDGL 108
K G L++STL+ +N + +YTAMIDG
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
Query: 109 CKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNN 168
CK +L A LL M + + P V ++ L++ + G ++ A + +M + +
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDV 564
Query: 169 ILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDH 228
+ ++ +I K ++K A + M+ +G D FT + L+ F + G L EA F D
Sbjct: 565 VSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDK 624
Query: 229 MSRMGLDPSTSAFDCIINSYGNSGDALK 256
M G +P D ++ + G+ K
Sbjct: 625 MVDSGFEPDAHICDSVLKYCISQGETDK 652
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%)
Query: 43 NIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYT 102
N E AF +M+ N V+ LL + K G L M G ++
Sbjct: 87 NHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHN 146
Query: 103 AMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKT 162
++ GLC+N +AV LL +M + S+ PDV +++ +I GF ++ A E+ +M +
Sbjct: 147 ILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGS 206
Query: 163 VLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEA 222
+ + + LI +CK + EA+ M G +D L+ FC G L
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266
Query: 223 EYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ D + G P ++ +I + G +A
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEA 301
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 67/136 (49%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
++ N TY +IDG C G + A LL +M L+P+ Y LL+ L K
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
E M+ + +S+ MIDG K ++ A LL M +A ++PD+ T+S LIN F
Sbjct: 550 RLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRF 609
Query: 144 LRAGKINNAKEIMCKM 159
L+ G ++ A KM
Sbjct: 610 LKLGYLDEAISFFDKM 625
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
L P+ YN L+ C +G++++A+RL +EM P+ V++ +++G K
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
S L M G+ +Y+ +I+ K L+EA+ D M+ + PD ++
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYC 179
+ G+ + E++ K+ +VL+ L T++ C
Sbjct: 644 CISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TY+ LIDG+C +E+A LL+EM G P Y +L+N L K ++ +
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 466
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ ++ N V Y MI K L EAV L ++M PDV ++ L++G ++
Sbjct: 467 FKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVK 526
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AG IN A ++ KM + + ++ ++ + + + A+ + + HSG D T
Sbjct: 527 AGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVT 586
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGN 250
N L+ F +G +EA M M G + + I+++ GN
Sbjct: 587 YNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGN 631
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 1/228 (0%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
P+ ITY+ LI + G + A RL DEM + ++P E Y LL K K
Sbjct: 230 FPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALD 289
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
E M+ G +YT +I GL K ++EA DML+ + PDVV + L+N
Sbjct: 290 LFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILG 349
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMR-NLKEALNTYAVMNHSGHVSDH 203
+ G++ + +M + Y+T+I + + ++ E + + M
Sbjct: 350 KVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSE 409
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS 251
FT ++L+ +C++ R+++A ++ M G P +A+ +IN+ G +
Sbjct: 410 FTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKA 457
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 36/268 (13%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSK---------- 75
P TY LI G G ++EA+ +M+ GL P+ V L+N L K
Sbjct: 301 PTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNV 360
Query: 76 HSKFGL--------------------------VSSTLERMRMNGVRVGHISYTAMIDGLC 109
S+ G+ VSS ++M+ + V +Y+ +IDG C
Sbjct: 361 FSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYC 420
Query: 110 KNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNI 169
K +E+A+ LL++M + P + LIN +A + A E+ ++ + +++
Sbjct: 421 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSR 480
Query: 170 LYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHM 229
+Y+ +I ++ K L EA++ + M + G D + N L++ ++G + EA + M
Sbjct: 481 VYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKM 540
Query: 230 SRMGLDPSTSAFDCIINSYGNSGDALKA 257
G ++ + I+N + +G +A
Sbjct: 541 EENGCRADINSHNIILNGFARTGVPRRA 568
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 101/232 (43%), Gaps = 2/232 (0%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHG-LKPNEVTYGALLNGLSKHSKFGL 81
N +C TY TLI E +R + E+V + + + L+ L +
Sbjct: 121 NFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSK 180
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDML-KASINPDVVTFSVLI 140
S + + + +Y ++I L + E+ + +M + PD +T+S LI
Sbjct: 181 ALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALI 240
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+ + + G+ ++A + +M + +Y+TL+ Y K+ +++AL+ + M +G
Sbjct: 241 SSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCS 300
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+T L+ ++GR+ EA F M R GL P + ++N G G
Sbjct: 301 PTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVG 352
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 94/187 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TY TLI G C G I+EA +L EMV P VTY +L+NGL
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRY 249
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
LE M+ G+ +Y++++DGLCK+ +A+ L + M+ P++VT++ LI G +
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
KI A E++ +M L + LY +I +C + +EA N M G + T
Sbjct: 310 EQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLT 369
Query: 206 CNVLVAT 212
N+ V T
Sbjct: 370 WNIHVKT 376
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 1/217 (0%)
Query: 21 SFNLLPNCITYNTLIDGHC-SKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF 79
L P + N LI C + G ++ ++ EM G P+ TYG L++GL + +
Sbjct: 149 EIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRI 208
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
M ++YT++I+GLC ++ ++EA+ L++M I P+V T+S L
Sbjct: 209 DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSL 268
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
++G + G+ A E+ M N + Y+TLI CK + ++EA+ MN G
Sbjct: 269 MDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGL 328
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDP 236
D +++ FC + +EA F+D M G+ P
Sbjct: 329 KPDAGLYGKVISGFCAISKFREAANFLDEMILGGITP 365
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 5/230 (2%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F+ P+ Y T++ + + AF+ M GL P + L+ L ++ G
Sbjct: 115 FDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRND--GT 172
Query: 82 VSSTLE---RMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSV 138
V + L+ M G +Y +I GLC+ ++EA L +M++ P VVT++
Sbjct: 173 VDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTS 232
Query: 139 LINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
LING + ++ A + +M + N YS+L+ CK +A+ + +M G
Sbjct: 233 LINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292
Query: 199 HVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
+ T L+ C+ +++EA +D M+ GL P + +I+ +
Sbjct: 293 CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGF 342
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 8/142 (5%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ Y +I G C+ EA LDEM+ G+ PN +T+ + S GL +
Sbjct: 328 LKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVK-TSNEVVRGLCA 386
Query: 84 STLER-------MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTF 136
+ R MR G+ V + +++ LCK ++AV L+D+++ P T+
Sbjct: 387 NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTW 446
Query: 137 SVLINGFLRAGKINNAKEIMCK 158
+LI L + A + + +
Sbjct: 447 KLLIGHTLDKTIVGEASDTLLR 468
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 1/162 (0%)
Query: 100 SYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR-AGKINNAKEIMCK 158
+Y ++ L + L A +M + + P V + +VLI R G ++ +I +
Sbjct: 123 AYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLE 182
Query: 159 MYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGR 218
M K ++ Y TLI C+ + EA + M T L+ C S
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN 242
Query: 219 LKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+ EA +++ M G++P+ + +++ G +L+A L
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 36/273 (13%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+PN TY +LID +C GN+ +AFRL +EM+ G++ N VTY AL++GL +
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 457
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+M GV SY A+I G K + ++ A+ LL+++ I PD++ + I G
Sbjct: 458 ELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 517
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALN-------------- 189
KI AK +M +M + + N+++Y+TL+ Y K N E L+
Sbjct: 518 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTV 577
Query: 190 -TYAVM--------------NHSGHVSDHFTCNVLVATF-------CRSGRLKEAEYFMD 227
T+ V+ ++ +S+ F A F C+ +++ A +
Sbjct: 578 VTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE 637
Query: 228 HMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
M + GL P +A+ +++ G+ L+A L
Sbjct: 638 QMVQKGLVPDRTAYTSLMDGNFKQGNVLEALAL 670
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 112/235 (47%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ ITYN LI+ C G + EM +GLKPN V+Y L++ K
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
MR G+ +YT++ID CK L +A L ++ML+ + +VVT++ LI+G
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A ++ A+E+ KM ++ N Y+ LI+ + K +N+ AL + G D
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+ C +++ A+ M+ M G+ ++ + ++++Y SG+ + L
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHL 564
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 110/214 (51%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+P+ +TYN++IDG G +++ +EM +P+ +TY AL+N K K +
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
M+ NG++ +SY+ ++D CK ++++A+ DM + + P+ T++ LI+
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G +++A + +M + + N + Y+ LI C +KEA + M+ +G + +
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPS 237
+ N L+ F ++ + A ++ + G+ P
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 506
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 106/225 (47%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F + P + N L+ G ++ R +M+ G +P TY +++ + K
Sbjct: 221 FRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEA 280
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
E M+ G+ ++Y +MIDG K L++ V ++M PDV+T++ LIN
Sbjct: 281 ARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALIN 340
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
F + GK+ E +M L N + YSTL+ +CK +++A+ Y M G V
Sbjct: 341 CFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVP 400
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
+ +T L+ C+ G L +A + M ++G++ + + +I+
Sbjct: 401 NEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 3/235 (1%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
+P ++ L G +EEA + +M + P + LL+ +K K V
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
+ M G R +Y MID +CK +E A L ++M + PD VT++ +I+GF
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ G++++ +M + I Y+ LI +CK L L Y M +G +
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS---YGNSGDALK 256
+ + LV FC+ G +++A F M R+GL P+ + +I++ GN DA +
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N + Y TL+D + GN E LLDEM ++ VT+ L++GL K+
Sbjct: 541 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 600
Query: 87 ERMRMN-GVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
R+ + G++ +TAMIDGLCK+ +E A L + M++ + PD ++ L++G +
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFK 660
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G + A + KM + + L+ + Y++L++ L++A + M G D
Sbjct: 661 QGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVL 720
Query: 206 CNVLVATFCRSGRLKEA----EYFMDH 228
C ++ G + EA Y M H
Sbjct: 721 CISVLKKHYELGCIDEAVELQSYLMKH 747
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
F L N + +IDG C +E A L ++MV GL P+ Y +L++G K
Sbjct: 606 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL 665
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ ++M G+++ ++YT+++ GL L++A L++M+ I+PD V ++
Sbjct: 666 EALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVL 725
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNN 168
G I+ A E+ + K L+ ++
Sbjct: 726 KKHYELGCIDEAVELQSYLMKHQLLTSD 753
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 107/208 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TYN L+ + G ++ RL DEM G P+ TY LL+ L K +K +T
Sbjct: 252 PDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTT 311
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L M+ G+ + YT +IDGL + LE + LD+M+KA PDVV ++V+I G++
Sbjct: 312 LNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVV 371
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+G+++ AKE+ +M + N Y+++I C +EA M G +
Sbjct: 372 SGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVV 431
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMG 233
+ LV+ ++G+L EA + M + G
Sbjct: 432 YSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 10/233 (4%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALL-----NGLSKHSKFGLVSS 84
+Y+ L+ G + +RL+DEMV G T+ L+ GL+K + + S
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
+ R SY A+++ L + + + ML+ +PDV+T+++L+
Sbjct: 211 -----KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNY 265
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
R GK++ + +M + ++ Y+ L++ K AL T M G
Sbjct: 266 RLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVL 325
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
L+ R+G L+ +YF+D M + G P + +I Y SG+ KA
Sbjct: 326 HYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKA 378
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 2/175 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIE-EAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
P+ TYN L+ KGN A L+ M G+ P+ + Y L++GLS+
Sbjct: 287 PDSYTYNILLH-ILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKY 345
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L+ M G R + YT MI G + L++A + +M P+V T++ +I G
Sbjct: 346 FLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLC 405
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
AG+ A ++ +M N ++YSTL+ K L EA M GH
Sbjct: 406 MAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGH 460
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
LPN TYN++I G C G EA LL EM S G PN V Y L++ L K K
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNR 112
+ M V+ GH Y ++ + K R
Sbjct: 451 VIREM----VKKGH--YVHLVPKMMKYR 472
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 101/231 (43%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
T+N LI G ++A + + +P + +Y A+LN L ++ L+ ++M
Sbjct: 186 TFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQM 245
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+G ++Y ++ + ++ L D+M + +PD T+++L++ + K
Sbjct: 246 LEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKP 305
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A + M + + + + Y+TLI + NL+ M +G D V+
Sbjct: 306 LAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVM 365
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+ + SG L +A+ M+ G P+ ++ +I +G+ +A +L
Sbjct: 366 ITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWL 416
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
+ LP + N + +G ++ A R EM + PN T +++G + K
Sbjct: 197 YGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDK 256
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
L+ M G R +SY +I G C+ LL A+ L + M K+ + P+VVTF+ LI+
Sbjct: 257 GIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIH 316
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
GF RA K+ A ++ +M + N + Y+TLI Y + + + A Y M +G
Sbjct: 317 GFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQR 376
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
D T N L+ C+ + ++A F+ + + L P++S F +I
Sbjct: 377 DILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
++YNTLI GHC KG + A +L + M GL+PN VT+ L++G + K S
Sbjct: 274 VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
M+ V ++Y +I+G + E A +DM+ I D++T++ LI G + K
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK 393
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
A + + ++ K LV N+ +S LI C +N Y M SG + T N+
Sbjct: 394 TRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNM 453
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
LV+ FCR+ A + M R + + + N + G
Sbjct: 454 LVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG 497
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 85/146 (58%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N+ PN +TYNTLI+G+ +G+ E AFR ++MV +G++ + +TY AL+ GL K +K
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ ++ + + +++A+I G C + + L M+++ +P+ TF++L++
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSA 457
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNN 168
F R + A +++ +M + + L++
Sbjct: 458 FCRNEDFDGASQVLREMVRRSIPLDS 483
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%)
Query: 66 YGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDML 125
+ +L + KF + T +M+ G S A + L ++ A+ +M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 126 KASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLK 185
+ I+P+ T +++++G+ R+GK++ E++ M + ++ Y+TLI +C+ L
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 186 EALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
AL +M SG + T N L+ FCR+ +L+EA M + + P+T ++ +I
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 246 NSYGNSGDALKAF 258
N Y GD AF
Sbjct: 351 NGYSQQGDHEMAF 363
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 53/137 (38%), Gaps = 35/137 (25%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
NL+PN T++ LI G C + N + F L M+ G PNE T+ L
Sbjct: 408 NLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML------------- 454
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ C+N + A +L +M++ SI D T + NG
Sbjct: 455 ----------------------VSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNG 492
Query: 143 FLRAGKINNAKEIMCKM 159
GK K+++ +M
Sbjct: 493 LKHQGKDQLVKKLLQEM 509
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
+ LP + N + +G ++ A R EM + PN T +++G + K
Sbjct: 197 YGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDK 256
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
L+ M G R +SY +I G C+ LL A+ L + M K+ + P+VVTF+ LI+
Sbjct: 257 GIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIH 316
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
GF RA K+ A ++ +M + N + Y+TLI Y + + + A Y M +G
Sbjct: 317 GFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQR 376
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
D T N L+ C+ + ++A F+ + + L P++S F +I
Sbjct: 377 DILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Score = 107 bits (267), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 104/224 (46%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
++YNTLI GHC KG + A +L + M GL+PN VT+ L++G + K S
Sbjct: 274 VSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
M+ V ++Y +I+G + E A +DM+ I D++T++ LI G + K
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAK 393
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
A + + ++ K LV N+ +S LI C +N Y M SG + T N+
Sbjct: 394 TRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNM 453
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
LV+ FCR+ A + M R + + + N + G
Sbjct: 454 LVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQG 497
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 85/146 (58%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N+ PN +TYNTLI+G+ +G+ E AFR ++MV +G++ + +TY AL+ GL K +K
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ ++ + + +++A+I G C + + L M+++ +P+ TF++L++
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSA 457
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNN 168
F R + A +++ +M + + L++
Sbjct: 458 FCRNEDFDGASQVLREMVRRSIPLDS 483
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%)
Query: 66 YGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDML 125
+ +L + KF + T +M+ G S A + L ++ A+ +M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 126 KASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLK 185
+ I+P+ T +++++G+ R+GK++ E++ M + ++ Y+TLI +C+ L
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 186 EALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
AL +M SG + T N L+ FCR+ +L+EA M + + P+T ++ +I
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 246 NSYGNSGDALKAF 258
N Y GD AF
Sbjct: 351 NGYSQQGDHEMAF 363
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 53/137 (38%), Gaps = 35/137 (25%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
NL+PN T++ LI G C + N + F L M+ G PNE T+ L
Sbjct: 408 NLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNML------------- 454
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ C+N + A +L +M++ SI D T + NG
Sbjct: 455 ----------------------VSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNG 492
Query: 143 FLRAGKINNAKEIMCKM 159
GK K+++ +M
Sbjct: 493 LKHQGKDQLVKKLLQEM 509
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%)
Query: 44 IEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTA 103
+E+ +++ M G+ PN T+ L N S F V LE+M G ++Y
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 104 MIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTV 163
++ C+ L+EA +L M + + PD+VT++ LI G + G++ A + +M
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
Query: 164 LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAE 223
+ + + Y+TLIY YCK ++++ M + V D FTC V+V F R GRL A
Sbjct: 337 IKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAV 396
Query: 224 YFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
F+ + R+ +D D +I S G A
Sbjct: 397 NFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAA 430
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 36/268 (13%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TYNTL+ +C +G ++EAF L M + P+ VTY +L+ GL K + T
Sbjct: 269 PDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQT 328
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
RM G++ +SY +I CK +++++ LL +ML S+ PD T V++ GF+R
Sbjct: 329 FHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVR 388
Query: 146 AGKINNAKEIMCKMYKTVL-------------------------VLNNIL---------- 170
G++ +A + ++ + + +L+ I+
Sbjct: 389 EGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPE 448
Query: 171 -YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHM 229
Y+ LI + + ++EAL + + V D T L+ CR GR +EAE M M
Sbjct: 449 TYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEM 508
Query: 230 SRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ P + ++ Y D KA
Sbjct: 509 FDSEVKPDSFICGALVYGYCKELDFDKA 536
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 109/250 (43%), Gaps = 41/250 (16%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+C++YNTLI +C +G ++++ +LL EM+ + + P+ T ++ G + + L+S+
Sbjct: 339 PDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGR--LLSAV 396
Query: 86 -----LERMRMN---------------------------------GVRVGHISYTAMIDG 107
L R++++ G +Y +I+
Sbjct: 397 NFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIES 456
Query: 108 LCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLN 167
L + +EEA+ L + + D T+ LI R G+ A+ +M +M+ + + +
Sbjct: 457 LSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPD 516
Query: 168 NILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSG-RLKEAEYFM 226
+ + L+Y YCK + +A ++ + D + N LV C +G K+A
Sbjct: 517 SFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQ 576
Query: 227 DHMSRMGLDP 236
+ M R+G P
Sbjct: 577 ERMQRLGFVP 586
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 62 NEVTYGALLNGLSKHSKFGLVSSTLERMRM---NGVRVGHISYTAMIDGLCKNRLLEEAV 118
+ V + L+ G + K GLV R +G V ++ +++GL K L+E+
Sbjct: 165 DPVVFDMLVKG---YLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCW 221
Query: 119 HLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNY 178
+ M + I+P+ TF++L N F + + KM + + + Y+TL+ +Y
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 179 CKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPST 238
C+ LKEA Y +M V D T L+ C+ GR++EA M G+ P
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 239 SAFDCIINSYGNSG 252
+++ +I +Y G
Sbjct: 342 MSYNTLIYAYCKEG 355
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 18/218 (8%)
Query: 58 GLKPNEVTYGALLNGLSKHSKFGL--------VSSTLERMRMNGVRV----------GHI 99
G +PN Y LL+ L KF L + T ++ ++ RV +
Sbjct: 108 GKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPV 167
Query: 100 SYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKM 159
+ ++ G K L+EE + ++L + + VVT + L+NG L+ + + ++ M
Sbjct: 168 VFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVM 227
Query: 160 YKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRL 219
+ + N ++ L +C N +E + M G D T N LV+++CR GRL
Sbjct: 228 CRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRL 287
Query: 220 KEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
KEA Y M R + P + +I G +A
Sbjct: 288 KEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREA 325
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 116/238 (48%), Gaps = 6/238 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG----- 80
PNC++YNTLI G CS N+++A L + M +G++PN VT +++ L + G
Sbjct: 189 PNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKK 248
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
L+ L+ + N + + T ++D KN + +A+ + +M + ++ D V ++V+I
Sbjct: 249 LLEEILDSSQANA-PLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVII 307
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G +G + A MC M K + + Y+TLI CK EA + + M + G
Sbjct: 308 RGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVA 367
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
D + V++ C G + A F+ M + L P ++ +I+ YG GD A
Sbjct: 368 PDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSAL 425
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 108/247 (43%), Gaps = 35/247 (14%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N+ + + YN +I G CS GN+ A+ + +MV G+ P+ TY L++ L K KF
Sbjct: 295 NVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEA 354
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLC----KNRLLE----------------------- 115
M+ GV ISY +I GLC NR E
Sbjct: 355 CDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDG 414
Query: 116 --------EAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLN 167
A+ +L+ ML + P+V T + LI+G+++ G++ +A + +M T + +
Sbjct: 415 YGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPD 474
Query: 168 NILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMD 227
Y+ L+ C + +L+ A Y M G D T LV C GRLK+AE +
Sbjct: 475 TTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLS 534
Query: 228 HMSRMGL 234
+ G+
Sbjct: 535 RIQATGI 541
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 118/231 (51%), Gaps = 5/231 (2%)
Query: 27 NCIT-YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
+C++ +++++ C +G ++ A L +M+ G+ P +T+ LLNGL K
Sbjct: 119 DCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGL 178
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ MR G +SY +I GLC +++A++L + M K I P+ VT +++++ +
Sbjct: 179 VREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQ 238
Query: 146 AGKI-NNAKEIMCKMYKTVLVLN--NILYSTLIYNYC-KMRNLKEALNTYAVMNHSGHVS 201
G I NN K+++ ++ + +I+ T++ + C K N+ +AL + M+ +
Sbjct: 239 KGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPA 298
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
D NV++ C SG + A FM M + G++P ++ +I++ G
Sbjct: 299 DSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEG 349
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 82/166 (49%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P + +N +IDG+ G+ A +L+ M+S+G+KPN T AL++G K +
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
MR + +Y ++ C L A L D+ML+ PD++T++ L+ G
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTY 191
G++ A+ ++ ++ T + ++++ + L Y +++ EA Y
Sbjct: 523 KGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVY 568
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%)
Query: 34 LIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNG 93
L+D GN+ +A + EM + + V Y ++ GL + M G
Sbjct: 271 LMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRG 330
Query: 94 VRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAK 153
V +Y +I LCK +EA L M + PD +++ V+I G G +N A
Sbjct: 331 VNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRAN 390
Query: 154 EIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATF 213
E + M K+ L+ +L++ +I Y + + AL+ +M G + +T N L+ +
Sbjct: 391 EFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGY 450
Query: 214 CRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+ GRL +A + + M + P T+ ++ ++ + G AF L
Sbjct: 451 VKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQL 497
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 35/232 (15%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHS-------- 77
P+ TYNTLI C +G +EA L M + G+ P++++Y ++ GL H
Sbjct: 333 PDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEF 392
Query: 78 ------------------------KFGLVSSTLERMRM---NGVRVGHISYTAMIDGLCK 110
++G SS L + + GV+ + A+I G K
Sbjct: 393 LLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVK 452
Query: 111 NRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNIL 170
L +A + ++M I+PD T+++L+ G + A ++ +M + + I
Sbjct: 453 GGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIIT 512
Query: 171 YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEA 222
Y+ L+ C LK+A + + + +G DH +L + R R EA
Sbjct: 513 YTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEA 564
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S+ + PN T N LI G+ G + +A+ + +EM S + P+ TY LL
Sbjct: 433 SYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLR 492
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
L + M G + I+YT ++ GLC L++A LL + I D V F +L
Sbjct: 493 LAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILA 552
Query: 141 NGFLRAGKINNAKEIMCKMYKT 162
+ R + A + K T
Sbjct: 553 KKYTRLQRPGEAYLVYKKWLAT 574
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 111/233 (47%), Gaps = 1/233 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN + +L+ G C +G + EA +L +M GL+P+ V + LL+G + K
Sbjct: 234 PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDL 293
Query: 86 LERMRMNGVRVGHISYTAMIDGLCK-NRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
+ MR G YT +I LC+ + ++EA+ + +M + D+VT++ LI+GF
Sbjct: 294 MNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFC 353
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ G I+ ++ M K ++ + + Y ++ + K +E L M G D
Sbjct: 354 KWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLL 413
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
NV++ C+ G +KEA + M GL P F +IN + + G ++A
Sbjct: 414 IYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEA 466
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 2/199 (1%)
Query: 44 IEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTA 103
+++A +LDEM +GL+P+E +G LL+ L K+ S E MR +T+
Sbjct: 183 VKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYFTS 241
Query: 104 MIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTV 163
++ G C+ L EA +L M +A + PD+V F+ L++G+ AGK+ +A ++M M K
Sbjct: 242 LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG 301
Query: 164 LVLNNILYSTLIYNYCKM-RNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEA 222
N Y+ LI C+ + + EA+ + M G +D T L++ FC+ G + +
Sbjct: 302 FEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKG 361
Query: 223 EYFMDHMSRMGLDPSTSAF 241
+D M + G+ PS +
Sbjct: 362 YSVLDDMRKKGVMPSQVTY 380
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 26/230 (11%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +TY LI G C G I++ + +LD+M G+ P++VTY ++ K +F +
Sbjct: 341 DIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELI 400
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
E+M+ G + Y +I CK ++EAV L ++M ++P V TF ++INGF
Sbjct: 401 EKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQ 460
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G + A C +K ++ S I++ + LK LN + D ++C
Sbjct: 461 GFLIEA----CNHFKEMV-------SRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSC 509
Query: 207 ---------------NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAF 241
+ + G +KEA + M M L P + +
Sbjct: 510 ISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTY 559
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 3/201 (1%)
Query: 26 PNCITYNTLIDGHC-SKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
PN Y LI C ++ ++EA R+ EM +G + + VTY AL++G K S
Sbjct: 304 PNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYS 363
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L+ MR GV ++Y ++ K EE + L++ M + +PD++ ++V+I
Sbjct: 364 VLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLAC 423
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS--D 202
+ G++ A + +M L + +I + L EA N + M G S
Sbjct: 424 KLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQ 483
Query: 203 HFTCNVLVATFCRSGRLKEAE 223
+ T L+ R +L+ A+
Sbjct: 484 YGTLKSLLNNLVRDDKLEMAK 504
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Query: 103 AMIDGLCKNRLLEEAVHLLDDMLKASINPDVVT---FSVLINGFLRAGKINNAKEIMCKM 159
+M+ L K R L+++M K NP+++ F VL+ F A + A E++ +M
Sbjct: 136 SMVMILSKMRQFGAVWGLIEEMRKT--NPELIEPELFVVLMRRFASANMVKKAVEVLDEM 193
Query: 160 YKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRL 219
K L + ++ L+ CK ++KEA + M + + ++L +CR G+L
Sbjct: 194 PKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYG-WCREGKL 252
Query: 220 KEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
EA+ + M GL+P F +++ Y ++G A+ L
Sbjct: 253 MEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDL 293
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 110/237 (46%), Gaps = 1/237 (0%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F L PN + YNTL+ G CS GNI +A + M G PN TYG+L+NG +K
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
+M +G + YT M++ LC++ +EA L++ M K + P V TF+ I
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNIL-YSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G AG+++ A+++ +M + NI+ Y+ L+ K ++EA + G
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
T N L+ C +G A + M G P + II +Y G A +A
Sbjct: 526 WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 1/213 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNG-LSKHSKFGLVSS 84
PN I+Y+TLI+ C+ G IE AF L +M+ G PN T +L+ G + + F +
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDL 338
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
+ +R G++ ++Y ++ G C + + +AV + M + +P++ T+ LINGF
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ G ++ A I KM + N ++Y+ ++ C+ KEA + +M+
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP 458
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPS 237
T N + C +GRL AE M + P
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPP 491
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 1/228 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P YN LI+G C + + + AF L+ EMV G+ PN ++Y L+N L + L S
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKA-SINPDVVTFSVLINGFL 144
L +M G + ++++ G +A+ L + M++ + P+VV ++ L+ GF
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFC 363
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
G I A + M + N Y +LI + K +L A+ + M SG +
Sbjct: 364 SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVV 423
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+V CR + KEAE ++ MS+ PS F+ I ++G
Sbjct: 424 VYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAG 471
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 8/237 (3%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN TYN L+ C ++ A +LL EM + G P+ V+Y +++ + + GLV
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCE---VGLVKEG 235
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E V Y A+I+GLCK + A L+ +M++ I+P+V+++S LIN
Sbjct: 236 RELAERFEPVVS--VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCN 293
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLK-EALNTYAVMNHS-GHVSDH 203
+G+I A + +M K N S+L+ C +R +AL+ + M G +
Sbjct: 294 SGQIELAFSFLTQMLKRGCHPNIYTLSSLVKG-CFLRGTTFDALDLWNQMIRGFGLQPNV 352
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
N LV FC G + +A HM +G P+ + +IN + G A ++
Sbjct: 353 VAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYI 409
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 6/217 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ ++Y T+I C G ++E L + +P Y AL+NGL K +
Sbjct: 214 PDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVYNALINGLCKEHDYKGAFEL 268
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M G+ ISY+ +I+ LC + +E A L MLK +P++ T S L+ G
Sbjct: 269 MREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFL 328
Query: 146 AGKINNAKEIMCKMYKTV-LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
G +A ++ +M + L N + Y+TL+ +C N+ +A++ ++ M G +
Sbjct: 329 RGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR 388
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAF 241
T L+ F + G L A Y + M G P+ +
Sbjct: 389 TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVY 425
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 7/196 (3%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEM-VSHGLKPNEVTYGALLNGLSKHSKFGL 81
N P+ T+N I G C G ++ A ++ +M H PN VTY LL+GL+K ++
Sbjct: 452 NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEE 511
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
+ M GV +Y ++ G C L A+ L+ M+ +PD +T +++I
Sbjct: 512 AYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIIL 571
Query: 142 GFLRAGKINNAKEIM----CKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHS 197
+ + GK A +++ C K + I Y+ +I+ C+ ++ + M +
Sbjct: 572 AYCKQGKAERAAQMLDLVSCGRRK--WRPDVISYTNVIWGLCRSNCREDGVILLERMISA 629
Query: 198 GHVSDHFTCNVLVATF 213
G V T +VL+ F
Sbjct: 630 GIVPSIATWSVLINCF 645
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TYNTL+ G C+ G A +L+ +M+ G P+E+T ++ K K + L+ +
Sbjct: 530 TYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLV 589
Query: 90 R--MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
R ISYT +I GLC++ E+ V LL+ M+ A I P + T+SVLIN F+
Sbjct: 590 SCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFI 646
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 91/220 (41%), Gaps = 8/220 (3%)
Query: 42 GNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISY 101
G E A + + G P+ Y +L+ L ++ ++ M+ +G +Y
Sbjct: 125 GLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTY 184
Query: 102 TAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYK 161
++ LCKN ++ A LL +M PD V+++ +I+ G + +E+ +
Sbjct: 185 NVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEP 244
Query: 162 TVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKE 221
V V Y+ LI CK + K A M G + + + L+ C SG+++
Sbjct: 245 VVSV-----YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIEL 299
Query: 222 AEYFMDHMSRMGLDPSTSAFDCIINS---YGNSGDALKAF 258
A F+ M + G P+ ++ G + DAL +
Sbjct: 300 AFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLW 339
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 109/225 (48%), Gaps = 7/225 (3%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TYN LI G G ++A +L DEMV +KP VT+G L++GL K S+ V
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSR---VKEA 206
Query: 86 L----ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
L + +++ GVR Y ++I LC+ L A L D+ + I D +S LI+
Sbjct: 207 LKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLIS 266
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
++AG+ N I+ +M + + + Y+ LI +C + + A M G
Sbjct: 267 SLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKP 326
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
D + N+++ F R + +EA Y + M R G P T ++ + +
Sbjct: 327 DVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFD 371
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TYN LI+G C + + E A R+LDEMV GLKP+ ++Y +L + K+ +
Sbjct: 291 PDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYL 350
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E M G +SY + DGLC+ EEA +LD+ML P +
Sbjct: 351 FEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCE 410
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALN 189
+GK+ +++ +++ + ++ +S +I CK + ++++
Sbjct: 411 SGKLEILSKVISSLHRGIAGDADV-WSVMIPTMCKEPVISDSID 453
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
+ + P Y +LI C G + AF+L DE +K + Y L++ L K +
Sbjct: 217 YGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNE 276
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
VS LE M G + ++Y +I+G C E A +LD+M++ + PDV+++++++
Sbjct: 277 VSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILG 336
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
F R K A + M + + + Y + C+ +EA M G+
Sbjct: 337 VFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKP 396
Query: 202 DHFTCNVLVATFCRSGRLK 220
+ C SG+L+
Sbjct: 397 RRDRLEGFLQKLCESGKLE 415
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 1/159 (0%)
Query: 100 SYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKM 159
+Y +I G ++ ++A+ L D+M+K + P VTF LI+G + ++ A ++ M
Sbjct: 154 TYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDM 213
Query: 160 YKTVLVLNNI-LYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGR 218
K V + +Y++LI C++ L A D + L+++ ++GR
Sbjct: 214 LKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGR 273
Query: 219 LKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
E ++ MS G P T ++ +IN + D+ A
Sbjct: 274 SNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESA 312
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 1/207 (0%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
+ L+ S +++A +LDEM G +P+E +G LL+ L KH + E MR
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 245
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
M V +T+++ G C+ + EA ++L M +A PD+V ++ L++G+ AGK+
Sbjct: 246 MR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMA 304
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLV 210
+A +++ M + N Y+ LI CK+ ++EA+ + M +D T LV
Sbjct: 305 DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALV 364
Query: 211 ATFCRSGRLKEAEYFMDHMSRMGLDPS 237
+ FC+ G++ + +D M + GL PS
Sbjct: 365 SGFCKWGKIDKCYIVLDDMIKKGLMPS 391
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N + +L+ G C G + EA +L +M G +P+ V Y LL+G + K L
Sbjct: 251 NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLL 310
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
MR G YT +I LCK +EEA+ + +M + DVVT++ L++GF +
Sbjct: 311 RDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKW 370
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
GKI+ ++ M K L+ + + Y ++ + K + +E L M + D
Sbjct: 371 GKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIY 430
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
NV++ C+ G +KEA + M GL P F +IN + G L+A
Sbjct: 431 NVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEA 481
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 3/207 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ + Y L+ G+ + G + +A+ LL +M G +PN Y L+ L K +
Sbjct: 285 PDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKV 344
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M ++YTA++ G CK +++ +LDDM+K + P +T+ ++ +
Sbjct: 345 FVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEK 404
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
E+M KM + + +Y+ +I CK+ +KEA+ + M +G T
Sbjct: 405 KESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDT 464
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRM 232
+++ G L EA DH M
Sbjct: 465 FVIMINGLASQGCLLEAS---DHFKEM 488
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 89/184 (48%), Gaps = 2/184 (1%)
Query: 65 TYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHIS-YTAMIDGLCKNRLLEEAVHLLDD 123
Y +++ LSK +FG V +E MR ++ + ++ ++++A+ +LD+
Sbjct: 149 VYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDE 208
Query: 124 MLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRN 183
M K PD F L++ + G + +A ++ M + +N +++L+Y +C++
Sbjct: 209 MPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGK 267
Query: 184 LKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDC 243
+ EA MN +G D L++ + +G++ +A + M R G +P+ + +
Sbjct: 268 MMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTV 327
Query: 244 IINS 247
+I +
Sbjct: 328 LIQA 331
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 104/208 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TYN ++ + G + +RLLDEMV G P+ TY LL+ L+ +K +
Sbjct: 255 PDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNL 314
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L MR GV G I +T +IDGL + LE + +D+ +K PDVV ++V+I G++
Sbjct: 315 LNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYIS 374
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G++ A+E+ +M + + N Y+++I +C KEA M G +
Sbjct: 375 GGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVV 434
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMG 233
+ LV +G++ EA + M G
Sbjct: 435 YSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 122/307 (39%), Gaps = 72/307 (23%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHG---------------------- 58
+F NC Y+ L+ G + RL+DEM+ G
Sbjct: 147 NFRHTANC--YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLAR 204
Query: 59 -------------LKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMI 105
+P + +Y A+L+ L ++ L+ E+M +G ++Y ++
Sbjct: 205 DVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVM 264
Query: 106 DG---LCKN----RLLEE----------------------------AVHLLDDMLKASIN 130
L K RLL+E A++LL+ M + +
Sbjct: 265 FANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVE 324
Query: 131 PDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNT 190
P V+ F+ LI+G RAGK+ K M + K + + Y+ +I Y L++A
Sbjct: 325 PGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEM 384
Query: 191 YAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGN 250
+ M G + + FT N ++ FC +G+ KEA + M G +P+ + ++N+ N
Sbjct: 385 FKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKN 444
Query: 251 SGDALKA 257
+G L+A
Sbjct: 445 AGKVLEA 451
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 104 bits (260), Expect = 5e-23, Method: Composition-based stats.
Identities = 60/229 (26%), Positives = 109/229 (47%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TY T++ +LLDEMV G +PN VTY L++ + + + +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ G + ++Y +ID K L+ A+ + M ++PD T+SV+IN +AG +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A ++ C+M N + Y+ ++ + K RN + AL Y M ++G D T +++
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
+ G L+EAE M + P + +++ +G +G+ KA+
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Score = 104 bits (259), Expect = 8e-23, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 106/221 (47%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY TLID H G ++ A + M + GL P+ TY ++N L K
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M G ++Y M+D K R + A+ L DM A PD VT+S+++
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G + A+ + +M + + + +Y L+ + K N+++A Y M H+G + T
Sbjct: 552 CGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT 611
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
CN L++TF R ++ EA + +M +GL PS + +++
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 65.9 bits (159), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 97 GHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIM 156
GH +YT M+ L + + LLD+M++ P+ VT++ LI+ + RA +N A +
Sbjct: 364 GH-TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 157 CKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRS 216
+M + + + Y TLI + K L A++ Y M G D FT +V++ ++
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 217 GRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYG---NSGDALKAF 258
G L A M G P+ ++ +++ + N +ALK +
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY 527
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 104 bits (260), Expect = 5e-23, Method: Composition-based stats.
Identities = 60/229 (26%), Positives = 109/229 (47%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TY T++ +LLDEMV G +PN VTY L++ + + + +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ G + ++Y +ID K L+ A+ + M ++PD T+SV+IN +AG +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A ++ C+M N + Y+ ++ + K RN + AL Y M ++G D T +++
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
+ G L+EAE M + P + +++ +G +G+ KA+
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Score = 104 bits (259), Expect = 8e-23, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 106/221 (47%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY TLID H G ++ A + M + GL P+ TY ++N L K
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M G ++Y M+D K R + A+ L DM A PD VT+S+++
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G + A+ + +M + + + +Y L+ + K N+++A Y M H+G + T
Sbjct: 552 CGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT 611
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
CN L++TF R ++ EA + +M +GL PS + +++
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 65.9 bits (159), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 97 GHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIM 156
GH +YT M+ L + + LLD+M++ P+ VT++ LI+ + RA +N A +
Sbjct: 364 GH-TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 157 CKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRS 216
+M + + + Y TLI + K L A++ Y M G D FT +V++ ++
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 217 GRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYG---NSGDALKAF 258
G L A M G P+ ++ +++ + N +ALK +
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY 527
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 104 bits (260), Expect = 5e-23, Method: Composition-based stats.
Identities = 60/229 (26%), Positives = 109/229 (47%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TY T++ +LLDEMV G +PN VTY L++ + + + +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ G + ++Y +ID K L+ A+ + M ++PD T+SV+IN +AG +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A ++ C+M N + Y+ ++ + K RN + AL Y M ++G D T +++
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
+ G L+EAE M + P + +++ +G +G+ KA+
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Score = 103 bits (258), Expect = 8e-23, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 106/221 (47%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY TLID H G ++ A + M + GL P+ TY ++N L K
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M G ++Y M+D K R + A+ L DM A PD VT+S+++
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G + A+ + +M + + + +Y L+ + K N+++A Y M H+G + T
Sbjct: 552 CGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT 611
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
CN L++TF R ++ EA + +M +GL PS + +++
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 65.9 bits (159), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 97 GHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIM 156
GH +YT M+ L + + LLD+M++ P+ VT++ LI+ + RA +N A +
Sbjct: 364 GH-TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 157 CKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRS 216
+M + + + Y TLI + K L A++ Y M G D FT +V++ ++
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 217 GRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYG---NSGDALKAF 258
G L A M G P+ ++ +++ + N +ALK +
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY 527
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 115/238 (48%), Gaps = 3/238 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +T+ TLI+G C +G ++ AF L M G++P+ + Y L++G K G+
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ GV++ + +++ ID K+ L A + ML I+P+VVT+++LI G +
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G+I A + ++ K + + + YS+LI +CK NL+ Y M G+ D
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY---GNSGDALKAFFL 260
VLV + G + A F M + + F+ +I+ + +ALK F L
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 122/279 (43%), Gaps = 47/279 (16%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY++LIDG C GN+ F L ++M+ G P+ V YG L++GLSK GL+
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ---GLMLHA 480
Query: 86 LE---RMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFS----- 137
+ +M +R+ + + ++IDG C+ +EA+ + M I PDV TF+
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Query: 138 ------------------------------------VLINGFLRAGKINNAKEIMCKMYK 161
V+I+ + +I +A + + +
Sbjct: 541 SIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 600
Query: 162 TVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKE 221
+ + + Y+T+I YC +R L EA + ++ + + T +L+ C++ +
Sbjct: 601 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 660
Query: 222 AEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
A M+ G P+ + C+++ + S D +F L
Sbjct: 661 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 699
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSK----FGLV 82
+ + +++ ID + G++ A + M+ G+ PN VTY L+ GL + + FG+
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
L+R G+ ++Y+++IDG CK L L +DM+K PDVV + VL++G
Sbjct: 415 GQILKR----GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+ G + +A KM + LN +++++LI +C++ EAL + +M G D
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 203 HFTCNVLVATFCRSGRLKEAE-YFMDHM 229
VATF R+ E F HM
Sbjct: 531 -------VATFTTVMRVSIMEDAFCKHM 551
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 92/177 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TYNT+I G+CS ++EA R+ + + PN VT L++ L K++
Sbjct: 605 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 664
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M G + ++Y ++D K+ +E + L ++M + I+P +V++S++I+G +
Sbjct: 665 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 724
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
G+++ A I + L+ + + Y+ LI YCK+ L EA Y M +G D
Sbjct: 725 RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 77/149 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +T LI C +++ A R+ M G KPN VTYG L++ SK
Sbjct: 640 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 699
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E M+ G+ +SY+ +IDGLCK ++EA ++ + A + PDVV +++LI G+ +
Sbjct: 700 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 759
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTL 174
G++ A + M + + +++L L
Sbjct: 760 VGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 1/229 (0%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
++ N ++ G S IE A RLL ++ G PN VT+ L+NG K + +
Sbjct: 253 VSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
M G+ I+Y+ +IDG K +L L L + DVV FS I+ ++++G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
+ A + +M + N + Y+ LI C+ + EA Y + G T +
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
L+ FC+ G L+ + M +MG P + +++ G L A
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 108/232 (46%), Gaps = 6/232 (2%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALL------NGLSKHSKFG 80
N + +N+LIDG C +EA ++ M +G+KP+ T+ ++ + KH K
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT 554
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ + M+ N + +I L K +E+A +++++ + PD+VT++ +I
Sbjct: 555 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 614
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G+ +++ A+ I + T N + + LI+ CK ++ A+ +++M G
Sbjct: 615 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 674
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+ T L+ F +S ++ + + M G+ PS ++ II+ G
Sbjct: 675 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 726
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 92/194 (47%)
Query: 43 NIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYT 102
IE+A + + ++ ++P+ VTY ++ G + E +++ ++ T
Sbjct: 587 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 646
Query: 103 AMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKT 162
+I LCKN ++ A+ + M + P+ VT+ L++ F ++ I + ++ +M +
Sbjct: 647 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 706
Query: 163 VLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEA 222
+ + + YS +I CK + EA N + + + D +L+ +C+ GRL EA
Sbjct: 707 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 766
Query: 223 EYFMDHMSRMGLDP 236
+HM R G+ P
Sbjct: 767 ALLYEHMLRNGVKP 780
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 8/212 (3%)
Query: 51 LDEMVSHGLKPNEVT-YGALLNGLSKHSKFGLVSSTLERMRM---NGVRVGHISYTAMID 106
D++ G++P+ V+ +G +L+ L G V+ L+ R+ G RVG +S ++
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCK---GEVTKALDFHRLVMERGFRVGIVSCNKVLK 260
Query: 107 GLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVL 166
GL +++ E A LL +L P+VVTF LINGF + G+++ A ++ M + +
Sbjct: 261 GLSVDQI-EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEP 319
Query: 167 NNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFM 226
+ I YSTLI Y K L ++ H G D + + + +SG L A
Sbjct: 320 DLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVY 379
Query: 227 DHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
M G+ P+ + +I G +AF
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 118/221 (53%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T++++I+ C G + E LL EM + PN VTY L++ L K + + +
Sbjct: 257 PDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALAL 316
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+M + G+ V + YT ++DGL K L EA +L+ + P+VVT++ L++G +
Sbjct: 317 YSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCK 376
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AG +++A+ I+ +M + ++ N + YS++I Y K L+EA++ M V + FT
Sbjct: 377 AGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFT 436
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
++ ++G+ + A M +G++ + D ++N
Sbjct: 437 YGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVN 477
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N +PN +TY L+DG C G++ A ++ +M+ + PN VTY +++NG K
Sbjct: 359 NQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEA 418
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
S L +M V +Y +IDGL K E A+ L +M + + L+N
Sbjct: 419 VSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNH 478
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
R G+I K ++ M + L+ I Y++LI + K + + AL M G D
Sbjct: 479 LKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWD 538
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDA 254
+ NVL++ + G++ A++ M G++P + F+ ++NS GD+
Sbjct: 539 VVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDS 589
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
++ PN +TY TL+D A L +MV G+ + V Y L++GL K
Sbjct: 289 SVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREA 348
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
T + + + ++YTA++DGLCK L A ++ ML+ S+ P+VVT+S +ING
Sbjct: 349 EKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMING 408
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+++ G + A ++ KM +V N Y T+I K + A+ M G +
Sbjct: 409 YVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEEN 468
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
++ + LV R GR+KE + + M G+ + +I+ + GD
Sbjct: 469 NYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGD 519
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ ++ N ++ C G +EEA +L++M+ + PN TY L+ SKH + + T
Sbjct: 606 PSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKT 665
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E + G+++ Y +I LCK + ++A ++ DM PD VTF+ L++G+
Sbjct: 666 HETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFV 725
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+ A M + + N Y+T+I +KE + M G D FT
Sbjct: 726 GSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFT 785
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
N L++ + G +K + M GL P TS ++ +I+ + N G L+A
Sbjct: 786 YNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQA 837
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 34/260 (13%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDE----------------------------MV 55
+LP+ ++YNTLIDG C GN A L+DE MV
Sbjct: 192 ILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMV 251
Query: 56 SHGLKPNEVTYGALLNGLSKHSKF---GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNR 112
G P+ VT+ +++N L K K GL+ +E M V H++YT ++D L K
Sbjct: 252 MSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEM---SVYPNHVTYTTLVDSLFKAN 308
Query: 113 LLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYS 172
+ A+ L M+ I D+V ++VL++G +AG + A++ + + V N + Y+
Sbjct: 309 IYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYT 368
Query: 173 TLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRM 232
L+ CK +L A M + + T + ++ + + G L+EA + M
Sbjct: 369 ALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQ 428
Query: 233 GLDPSTSAFDCIINSYGNSG 252
+ P+ + +I+ +G
Sbjct: 429 NVVPNGFTYGTVIDGLFKAG 448
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 116/228 (50%), Gaps = 11/228 (4%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLL-DEMVSHGLKPNEVTYGALLNGLSKHSKF 79
+F ++P+ +N+LI G + + L+ +M++ G+ P+ L++ K
Sbjct: 86 TFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCK---V 142
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
G +S + +R + + ++Y +I GLC++ L +EA L +M+K I PD V+++ L
Sbjct: 143 GRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTL 202
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
I+GF + G AK ++ ++ + LN I ++ L+ +Y + ++EA Y M SG
Sbjct: 203 IDGFCKVGNFVRAKALVDEISE----LNLITHTILLSSYYNLHAIEEA---YRDMVMSGF 255
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
D T + ++ C+ G++ E + M M + P+ + +++S
Sbjct: 256 DPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDS 303
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 103/221 (46%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN TY +D + F+ + ++S+G+K + Y L+ L K +
Sbjct: 641 PNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMV 700
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M G +++ +++ G + +A+ M++A I+P+V T++ +I G
Sbjct: 701 MGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSD 760
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AG I + + +M + ++ Y+ LI K+ N+K ++ Y M G V T
Sbjct: 761 AGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTST 820
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
NVL++ F G++ +A + M + G+ P+TS + +I+
Sbjct: 821 YNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMIS 861
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 13/218 (5%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+P+ +T+N+L+ G+ ++ +A M+ G+ PN TY ++ GLS V
Sbjct: 709 FIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVD 768
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L M+ G+R +Y A+I G K ++ ++ + +M+ + P T++VLI+ F
Sbjct: 769 KWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEF 828
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKM------------RNLKEALNTY 191
GK+ A+E++ +M K + N Y T+I CK+ L EA
Sbjct: 829 ANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLL 888
Query: 192 AVM-NHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDH 228
M G++ + T + A F + G +AE F+
Sbjct: 889 KEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFLKE 926
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 99/224 (44%), Gaps = 40/224 (17%)
Query: 27 NCITYNTLIDGHCSKGNI--EEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
+ ++YN LI G G + + A++ + E G++P+ T+ ++N K +
Sbjct: 538 DVVSYNVLISGMLKFGKVGADWAYKGMRE---KGIEPDIATFNIMMNSQRKQGDSEGILK 594
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
++M+ G++ +S ++ LC+N +EEA+H+L+ M+ I+P++ T+ + FL
Sbjct: 595 LWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI----FL 650
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ + + K ++T+L I S +YN
Sbjct: 651 DTSSKHKRADAIFKTHETLLSYG-IKLSRQVYN--------------------------- 682
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
L+AT C+ G K+A M M G P T F+ +++ Y
Sbjct: 683 ---TLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGY 723
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 19/235 (8%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALL-----NGLSKHSKFGLVSST 85
++TL + S + A R L M + G+ P+ + +L+ NGL H + L+ S
Sbjct: 61 FHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLV-HDQVSLIYS- 118
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+M GV + +I CK L A+ LL + + I+ D VT++ +I+G
Sbjct: 119 --KMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCE 173
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G + A + + +M K ++ + + Y+TLI +CK+ N A A+++ + + T
Sbjct: 174 HGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRA---KALVDEISEL-NLIT 229
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+L++++ ++EA + D M G DP F IIN G L+ L
Sbjct: 230 HTILLSSYYNLHAIEEA--YRD-MVMSGFDPDVVTFSSIINRLCKGGKVLEGGLL 281
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S + P+ TYN LI G GN++ + + EM++ GL P TY L++ + K
Sbjct: 776 SRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKML 835
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCK 110
L+ M GV +Y MI GLCK
Sbjct: 836 QARELLKEMGKRGVSPNTSTYCTMISGLCK 865
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 103/207 (49%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F++ P+ +++ LID C+ N+ EA L+ ++ + G KP+ Y ++ G SK
Sbjct: 224 FDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE 283
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
++M+ GV I+Y +I GL K +EEA L M+ A PD T++ L+N
Sbjct: 284 AVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMN 343
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
G R G+ A ++ +M N+ Y+TL++ CK R + + + Y +M SG
Sbjct: 344 GMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKL 403
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDH 228
+ LV + +SG++ EA D+
Sbjct: 404 ESNGYATLVRSLVKSGKVAEAYEVFDY 430
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 111/241 (46%), Gaps = 3/241 (1%)
Query: 23 NLLPNCITYNTLIDGHC--SKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
N P T+ L+ C +I R+L+ MV++GL+P++VT + L + +
Sbjct: 117 NFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVD 176
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKA-SINPDVVTFSVL 139
++ + +Y ++ LCK + L +D+M + PD+V+F++L
Sbjct: 177 EAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTIL 236
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
I+ + + A ++ K+ + LY+T++ +C + EA+ Y M G
Sbjct: 237 IDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGV 296
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFF 259
D T N L+ ++GR++EA ++ M G +P T+ + ++N G++L A
Sbjct: 297 EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALS 356
Query: 260 L 260
L
Sbjct: 357 L 357
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 105/225 (46%), Gaps = 5/225 (2%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ +T + + C G ++EA L+ E+ P+ TY LL L K +V
Sbjct: 155 LEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVY 214
Query: 84 STLERMRMN-GVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
++ MR + V+ +S+T +ID +C ++ L EA++L+ + A PD ++ ++ G
Sbjct: 215 EFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKG 274
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
F K + A + KM + + + I Y+TLI+ K ++EA M +G+ D
Sbjct: 275 FCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPD 334
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
T L+ CR G A ++ M G P+ DC N+
Sbjct: 335 TATYTSLMNGMCRKGESLGALSLLEEMEARGCAPN----DCTYNT 375
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+C YNT++ G C+ EA + +M G++P+++TY L+ GLSK +
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMY 322
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L+ M G +YT++++G+C+ A+ LL++M P+ T++ L++G +
Sbjct: 323 LKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCK 382
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A ++ E+ M + + L + Y+TL+ + K + EA + S +SD
Sbjct: 383 ARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASA 442
Query: 206 CNVLVATFCRSGRLKE 221
+ L T + KE
Sbjct: 443 YSTLETTLKWLKKAKE 458
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 116/234 (49%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+C +YN++IDG G+ + A EM +G PN VT+ +L+NG K ++ L
Sbjct: 589 SCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMT 648
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
M+ +++ +Y A+IDG CK ++ A L ++ + + P+V ++ LI+GF
Sbjct: 649 HEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNL 708
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
GK++ A ++ KM + + Y+T+I K N+ A + Y+ + G V D
Sbjct: 709 GKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILH 768
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
VLV + G+ +A ++ M + + P+ + +I + G+ +AF L
Sbjct: 769 MVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRL 822
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 97/193 (50%), Gaps = 5/193 (2%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
Y LIDG C K +++ A+ L E+ GL PN Y +L++G K ++M
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+G+ +YT MIDGL K+ + A L ++L I PD + VL+NG + G+
Sbjct: 722 VNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQF 781
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A +++ +M K + N +LYST+I + + NL EA + M G V D N+L
Sbjct: 782 LKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLL 841
Query: 210 VATFCRSGRLKEA 222
V SGR+++
Sbjct: 842 V-----SGRVEKP 849
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 1/228 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN + YN ++ HC N++ A + EM+ GL+PN TY L++G K+
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDV 541
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKAS-INPDVVTFSVLINGFL 144
+ +M + + Y +I+GLCK +A +L +++K + +++ +I+GF+
Sbjct: 542 INQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFV 601
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ G ++A E +M + N + +++LI +CK + AL M D
Sbjct: 602 KVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLP 661
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
L+ FC+ +K A + +GL P+ S ++ +I+ + N G
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLG 709
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 115/262 (43%), Gaps = 34/262 (12%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TY ++I +GN+EEA R++DEMV G+ + + +L+NG K ++ G RM
Sbjct: 312 TYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRM 371
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA--- 146
G+ + ++ M++ CKN +E+A+ M I P V +I G L+A
Sbjct: 372 EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESP 431
Query: 147 -------------------------------GKINNAKEIMCKMYKTVLVLNNILYSTLI 175
GK++ A + M + + N + Y+ ++
Sbjct: 432 EAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMM 491
Query: 176 YNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLD 235
+C+M+N+ A + ++ M G ++FT ++L+ F ++ + A ++ M+ +
Sbjct: 492 LAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFE 551
Query: 236 PSTSAFDCIINSYGNSGDALKA 257
+ ++ IIN G KA
Sbjct: 552 ANEVIYNTIINGLCKVGQTSKA 573
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 1/200 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L PN TY+ LIDG + + A+ ++++M + + NEV Y ++NGL K +
Sbjct: 515 LEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAK 574
Query: 84 STLERM-RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
L+ + + + SY ++IDG K + AV +M + +P+VVTF+ LING
Sbjct: 575 EMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLING 634
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
F ++ +++ A E+ +M L L+ Y LI +CK ++K A ++ + G + +
Sbjct: 635 FCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPN 694
Query: 203 HFTCNVLVATFCRSGRLKEA 222
N L++ F G++ A
Sbjct: 695 VSVYNSLISGFRNLGKMDAA 714
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 104/223 (46%), Gaps = 1/223 (0%)
Query: 39 CSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGH 98
C +G ++ A L M G++PN V Y ++ + L S M G+ +
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN 519
Query: 99 ISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCK 158
+Y+ +IDG KN+ + A +++ M ++ + V ++ +ING + G+ + AKE++
Sbjct: 520 FTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQN 579
Query: 159 MYKTV-LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSG 217
+ K ++ Y+++I + K+ + A+ TY M+ +G + T L+ FC+S
Sbjct: 580 LIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSN 639
Query: 218 RLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
R+ A M M L A+ +I+ + D A+ L
Sbjct: 640 RMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTL 682
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 101/212 (47%), Gaps = 2/212 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSH-GLKPNEVTYGALLNGLSKHSKFGLVSS 84
P+ + ++ + C ++ A LL EM G+ ++ TY +++ K
Sbjct: 272 PDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVR 331
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
++ M G+ + I+ T++++G CK L +A+ L + M + + PD V FSV++ F
Sbjct: 332 VMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFC 391
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ ++ A E +M + +++L T+I K + + AL + + ++ F
Sbjct: 392 KNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFND-SFESWIAHGF 450
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDP 236
CN + FC+ G++ A F+ M + G++P
Sbjct: 451 MCNKIFLLFCKQGKVDAATSFLKMMEQKGIEP 482
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 80/152 (52%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+PN YN+LI G + G ++ A L +MV+ G+ + TY +++GL K L S
Sbjct: 691 LMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLAS 750
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ G+ I + +++GL K +A +L++M K + P+V+ +S +I G
Sbjct: 751 DLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGH 810
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLI 175
R G +N A + +M + +V ++ +++ L+
Sbjct: 811 HREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 98/253 (38%), Gaps = 38/253 (15%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F L P +N L++ + ++ A MV + P +L+ L + +
Sbjct: 165 FELTPRA--FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDE 222
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSV--- 138
+M + GV +++ ++ + R EEAV + ++ PD + FS+
Sbjct: 223 AKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQ 282
Query: 139 ---------------------------------LINGFLRAGKINNAKEIMCKMYKTVLV 165
+I F++ G + A +M +M +
Sbjct: 283 AACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIP 342
Query: 166 LNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYF 225
++ I ++L+ YCK L +AL+ + M G D +V+V FC++ +++A F
Sbjct: 343 MSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEF 402
Query: 226 MDHMSRMGLDPST 238
M + + PS+
Sbjct: 403 YMRMKSVRIAPSS 415
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 4/159 (2%)
Query: 104 MIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTV 163
++ L ++ L++EA + + M+ + D VT +L+ LR K A +I ++
Sbjct: 210 VLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRG 269
Query: 164 LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHS-GHVSDHFTCNVLVATFCRSGRLKEA 222
+ +L+S + CK +L AL+ M G + T ++ F + G ++EA
Sbjct: 270 AEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEA 329
Query: 223 EYFMDHMSRMGLDPSTSAFDCIINSY--GNS-GDALKAF 258
MD M G+ S A ++N Y GN G AL F
Sbjct: 330 VRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLF 368
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNG 72
++ PN + Y+T+I GH +GN+ EAFRL DEM+ G+ ++ + L++G
Sbjct: 795 DVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N +P+ +N L++G +++A +L +EM + +KP VTYG L+ G + + +
Sbjct: 245 NWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIA 304
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
LE M+M + + + + +IDGL + L EA+ +++ P +VT++ L+
Sbjct: 305 MEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKN 364
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
F +AG + A +I+ M + Y+ + K +E +N Y + +GH D
Sbjct: 365 FCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPD 424
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDP 236
T ++++ C G+L A M G+DP
Sbjct: 425 RLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDP 458
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 100/232 (43%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
+ N+ P +TY TLI+G+C ++ A +L+EM ++ N + + +++GL + +
Sbjct: 278 AMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLS 337
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ER + ++Y +++ CK L A +L M+ ++P T++
Sbjct: 338 EALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFF 397
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
F + K + K+ + + + Y ++ C+ L A+ M + G
Sbjct: 398 KYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGID 457
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
D T +L+ CR L+EA D+ R G+ P F I N + G
Sbjct: 458 PDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKG 509
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 110/246 (44%), Gaps = 20/246 (8%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F L P+ ++++++ C E A+ L+ + V N V+ + + ++++ G+
Sbjct: 131 FTLSPSL--FDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGM 188
Query: 82 VSSTLERMRM-----------NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDM---LKA 127
V + +R+ + ++D LCK + EA L+ + + +
Sbjct: 189 VQQAIRAFEFARSYEPVCKSATELRLLEV----LLDALCKEGHVREASMYLERIGGTMDS 244
Query: 128 SINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEA 187
+ P V F++L+NG+ R+ K+ A+++ +M + + Y TLI YC+MR ++ A
Sbjct: 245 NWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIA 304
Query: 188 LNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
+ M + + N ++ +GRL EA M+ P+ ++ ++ +
Sbjct: 305 MEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKN 364
Query: 248 YGNSGD 253
+ +GD
Sbjct: 365 FCKAGD 370
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 35/165 (21%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSK------- 78
P +TYN+L+ C G++ A ++L M++ G+ P TY SKH+K
Sbjct: 353 PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNL 412
Query: 79 -FGLVSS---------------------------TLERMRMNGVRVGHISYTAMIDGLCK 110
F L+ + + M+ G+ ++ T +I LC+
Sbjct: 413 YFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCR 472
Query: 111 NRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEI 155
+LEEA D+ ++ I P +TF ++ NG G + AK +
Sbjct: 473 LEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 119/238 (50%), Gaps = 12/238 (5%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
+N+LI + + G +E+ +L M G+ P+ +T+ +LL+ L K + G+ + MR
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 91 MN-GVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
GV ++ +I+G CKN +++EA + DM NPDVVT++ +I+G RAGK+
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 150 NNAKEIMCKMYK--TVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCN 207
A ++ M K T + N + Y+TL+ YC + + EA+ + M G + T N
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 208 VLVATFCRSGRLKEAEYFM----DHMSRMGLDPSTSAFDCIINSYGNSGD---ALKAF 258
L+ + R E + + D + P F+ +I ++ ++G A+K F
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTTFA--PDACTFNILIKAHCDAGHLDAAMKVF 376
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 4/213 (1%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
++ + P+ T+NTLI+G C ++EAFR+ +M + P+ VTY +++GL + K
Sbjct: 202 TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVK 261
Query: 81 LVSSTLERM--RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSV 138
+ + L M + V +SYT ++ G C + ++EAV + DML + P+ VT++
Sbjct: 262 IAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNT 321
Query: 139 LINGFLRAGKINNAKEIMCKMYK--TVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNH 196
LI G A + + K+I+ T + ++ LI +C +L A+ + M +
Sbjct: 322 LIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLN 381
Query: 197 SGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHM 229
D + +VL+ T C AE + +
Sbjct: 382 MKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 10/241 (4%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN ++Y TL+ G+C K I+EA + +M+S GLKPN VTY L+ GLS+ ++ +
Sbjct: 279 PNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDI 338
Query: 86 L--ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L ++ +I C L+ A+ + +ML ++PD ++SVLI
Sbjct: 339 LIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTL 398
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNN-------ILYSTLIYNYCKMRNLKEALNTYAVMNH 196
+ + A+ + ++++ ++L Y+ + C K+A + +
Sbjct: 399 CMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMK 458
Query: 197 SGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALK 256
G V D + L+ CR G+ K A + M R P ++ +I+ G+AL
Sbjct: 459 RG-VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALL 517
Query: 257 A 257
A
Sbjct: 518 A 518
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 115/235 (48%), Gaps = 21/235 (8%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEM-VSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
P+ +T+N+L+ +G A L DEM ++G+ P+ T+ L+NG K+S
Sbjct: 171 PSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFR 230
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKAS--INPDVVTFSVLING 142
+ M + ++Y +IDGLC+ ++ A ++L MLK + ++P+VV+++ L+ G
Sbjct: 231 IFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRG 290
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLI------YNYCKMRNL----KEALNTYA 192
+ +I+ A + M L N + Y+TLI + Y +++++ +A T+A
Sbjct: 291 YCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFA 350
Query: 193 VMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
D T N+L+ C +G L A M M L P ++++ +I +
Sbjct: 351 --------PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRT 397
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 99/210 (47%), Gaps = 8/210 (3%)
Query: 46 EAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS---TLERMRMNG-VRVGHISY 101
+ R D + + G E ++ +L L + + + ++ER R NG V++ +
Sbjct: 83 DGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIER-RSNGCVKLQDRYF 141
Query: 102 TAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYK 161
++I L +E+V L M + I+P V+TF+ L++ L+ G+ A ++ +M +
Sbjct: 142 NSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRR 201
Query: 162 TVLVL-NNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLK 220
T V ++ ++TLI +CK + EA + M D T N ++ CR+G++K
Sbjct: 202 TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVK 261
Query: 221 EAEYFMDHMSRMGLD--PSTSAFDCIINSY 248
A + M + D P+ ++ ++ Y
Sbjct: 262 IAHNVLSGMLKKATDVHPNVVSYTTLVRGY 291
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 3/204 (1%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
+Y TLI GHC +G + A+ LL M+ P+ TY L++GL K + L TL+RM
Sbjct: 466 SYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRM 525
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ ++ +++ L K + E+ L+ ML+ I ++ + ++ + +
Sbjct: 526 LRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQK 585
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A I+ +Y ++ L+ C+ R L +A + D TCN +
Sbjct: 586 EKAFLIVRLLYDNGYLVK---MEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTV 642
Query: 210 VATFCRSGRLKEAEYFMDHMSRMG 233
+ C+ R EA + + +G
Sbjct: 643 IEGLCKHKRHSEAFSLYNELVELG 666
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 101 bits (252), Expect = 5e-22, Method: Composition-based stats.
Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 5/245 (2%)
Query: 25 LPNCITYNTLIDGHCSKGNIEE--AFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+P+ I++NTLI+ G + A LLD + + GL+P+ +TY LL+ S+ S
Sbjct: 257 VPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGA 316
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
E M + + +Y AMI + L EA L ++ PD VT++ L+
Sbjct: 317 VKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYA 376
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNH-SGHVS 201
F R KE+ +M K + + Y+T+I+ Y K L AL Y M SG
Sbjct: 377 FARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNP 436
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA--FF 259
D T VL+ + ++ R EA M M +G+ P+ + +I Y +G +A F
Sbjct: 437 DAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTF 496
Query: 260 LCLIK 264
C+++
Sbjct: 497 SCMLR 501
Score = 86.3 bits (212), Expect = 2e-17, Method: Composition-based stats.
Identities = 52/230 (22%), Positives = 107/230 (46%), Gaps = 3/230 (1%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF--GLVSSTLER 88
YN ++ + G +A L+D M G P+ +++ L+N K L L+
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
+R +G+R I+Y ++ ++ L+ AV + +DM PD+ T++ +I+ + R G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
A+ + ++ + + Y++L+Y + + RN ++ Y M G D T N
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 209 LVATFCRSGRLKEA-EYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
++ + + G+L A + + D G +P + +I+S G + ++A
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Score = 85.5 bits (210), Expect = 3e-17, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 1/221 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TYN +I + G EA RL E+ G P+ VTY +LL ++ V
Sbjct: 330 PDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEV 389
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKAS-INPDVVTFSVLINGFL 144
++M+ G ++Y +I K L+ A+ L DM S NPD +T++VLI+
Sbjct: 390 YQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLG 449
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+A + A +M +M + YS LI Y K +EA +T++ M SG D+
Sbjct: 450 KANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNL 509
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
+V++ R ++A M G PS + ++ +I
Sbjct: 510 AYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
Score = 84.0 bits (206), Expect = 1e-16, Method: Composition-based stats.
Identities = 52/215 (24%), Positives = 100/215 (46%), Gaps = 2/215 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
P+ +TYN+L+ + N E+ + +M G +E+TY +++ K + L
Sbjct: 363 FFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLAL 422
Query: 84 STLERMR-MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ M+ ++G I+YT +ID L K EA L+ +ML I P + T+S LI G
Sbjct: 423 QLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICG 482
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+ +AGK A++ M ++ +N+ YS ++ + ++A Y M GH
Sbjct: 483 YAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPS 542
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRM-GLDP 236
+ +++ + R + + + M + G++P
Sbjct: 543 YTLYELMILGLMKENRSDDIQKTIRDMEELCGMNP 577
Score = 80.1 bits (196), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/224 (20%), Positives = 101/224 (45%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ T+N+L+ + G E A + + M+ G P + LL+ L + +
Sbjct: 785 PDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVV 844
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+E ++ G ++ S M+D + + E + M A P + + ++I +
Sbjct: 845 VEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCK 904
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
++ +A+ ++ +M + + ++++++ Y + + K+ + Y + +G D T
Sbjct: 905 GKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETT 964
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYG 249
N L+ +CR R +E M M +GLDP + +I+++G
Sbjct: 965 YNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFG 1008
Score = 72.4 bits (176), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 2/194 (1%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ TYNTLI +C EE + L+ +M + GL P TY +L++ K
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAE 1017
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
E + G+++ Y M+ + +A LL M A I P + T +L+ +
Sbjct: 1018 QLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSY 1077
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+G A++++ + T + L + YS++I Y + ++ + M G DH
Sbjct: 1078 SSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDH 1137
Query: 204 --FTCNVLVATFCR 215
+TC V A+F +
Sbjct: 1138 RIWTCFVRAASFSK 1151
Score = 68.9 bits (167), Expect = 3e-12, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 14/212 (6%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ ITY LID EA L+ EM+ G+KP TY AL+ G +K K T
Sbjct: 436 PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT 495
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M +G + +++Y+ M+D L + +A L DM+ P + ++I G ++
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMK 555
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYC---KMRNLKEALNTYAVMNHSGHVSD 202
+ ++ ++ + M + + + S L+ C R LK A+ +G+ +
Sbjct: 556 ENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAIT-------NGYELE 608
Query: 203 HFTCNVLVATFCRSGRLKEA----EYFMDHMS 230
+ T ++ ++ SGR EA E+ +H S
Sbjct: 609 NDTLLSILGSYSSSGRHSEAFELLEFLKEHAS 640
Score = 61.2 bits (147), Expect = 8e-10, Method: Composition-based stats.
Identities = 48/232 (20%), Positives = 101/232 (43%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P + N L+ C G +EE + +++E+ G K ++ + +L+ ++ V
Sbjct: 820 PTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKI 879
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M+ G Y MI+ LCK + + +A ++ +M +A+ ++ ++ ++ +
Sbjct: 880 YSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTA 939
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
++ ++ +T L + Y+TLI YC+ R +E M + G T
Sbjct: 940 IEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDT 999
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
L++ F + L++AE + + GL S + ++ +SG KA
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKA 1051
Score = 58.5 bits (140), Expect = 5e-09, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 7/207 (3%)
Query: 46 EAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMN-GVRVGHISYTAM 104
E F L+ + H PN A+L L + ++ L R G RV Y AM
Sbjct: 176 EVFEWLN--LRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQ--VYNAM 231
Query: 105 IDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI--NNAKEIMCKMYKT 162
+ ++ +A L+D M + PD+++F+ LIN L++G + N A E++ + +
Sbjct: 232 MGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNS 291
Query: 163 VLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEA 222
L + I Y+TL+ + NL A+ + M D +T N +++ + R G EA
Sbjct: 292 GLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEA 351
Query: 223 EYFMDHMSRMGLDPSTSAFDCIINSYG 249
E + G P ++ ++ ++
Sbjct: 352 ERLFMELELKGFFPDAVTYNSLLYAFA 378
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 113/232 (48%), Gaps = 1/232 (0%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N T+ ++ + ++EA + M + L PN V + LL+ L K
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
E MR + +Y+ +++G K L +A + +M+ A +PD+VT+S++++ +A
Sbjct: 227 ENMR-DRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKA 285
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G+++ A I+ M ++ +YS L++ Y L+EA++T+ M SG +D
Sbjct: 286 GRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVF 345
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
N L+ FC++ R+K + M G+ P++ + + I+ G+ +AF
Sbjct: 346 NSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAF 397
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 96/216 (44%), Gaps = 1/216 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TY+ ++D C G ++EA ++ M KP Y L++ ++ T
Sbjct: 270 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDT 329
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M +G++ + ++I CK ++ +L +M + P+ + ++++ +
Sbjct: 330 FLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIE 389
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G+ + A ++ KM K V + Y+ +I +C+ + ++ A + M G T
Sbjct: 390 RGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHT 448
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAF 241
+VL+ C ++A ++ M MG+ PS F
Sbjct: 449 FSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 484
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 101/232 (43%), Gaps = 1/232 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TY+ L++G + N+ +A + EM+ G P+ VTY +++ L K +
Sbjct: 235 PDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGI 294
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M + + Y+ ++ LEEAV +M ++ + DV F+ LI F +
Sbjct: 295 VRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCK 354
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A ++ N ++ +M + N+ + ++ + + EA + + M D T
Sbjct: 355 ANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCE-PDADT 413
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+++ FC ++ A+ +M + G+ PS F +IN KA
Sbjct: 414 YTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKA 465
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN + N ++ +G +EAF + +M+ +P+ TY ++ + +
Sbjct: 375 PNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKV 433
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ MR GV +++ +I+GLC+ R ++A LL++M++ I P VTF G LR
Sbjct: 434 WKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF-----GRLR 488
Query: 146 AGKINNAKEIMCK 158
I +E + K
Sbjct: 489 QLLIKEEREDVLK 501
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 36/269 (13%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ ++Y LI+G G + +A + + M+ G+ P+ AL+ GL K L
Sbjct: 147 PDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEM 206
Query: 86 L-ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
+ E ++ V++ + Y A+I G CK +E+A L M K PD+VT++VL+N +
Sbjct: 207 VAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYY 266
Query: 145 RAGKINNAKEIMCKMYKTVLVL-----NNIL----------------------------- 170
+ A+ +M +M ++ + L N +L
Sbjct: 267 DNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVV 326
Query: 171 -YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHM 229
YSTLI +C+ N ++A + M G V + T L+ F R G A+ +D M
Sbjct: 327 SYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQM 386
Query: 230 SRMGLDPSTSAFDCIINSYGNSGDALKAF 258
+ +GL P + I++ SG+ KA+
Sbjct: 387 TELGLSPDRIFYTTILDHLCKSGNVDKAY 415
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 1/219 (0%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
YN I + E A + +M G TY ++GL K KF L+ + L M
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
G ++ +D LC+ + AV M++ PDVV++++LING RAGK+
Sbjct: 107 TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVT 166
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS-DHFTCNVL 209
+A EI M ++ + +N + L+ C R + A A S V N L
Sbjct: 167 DAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNAL 226
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
++ FC++GR+++AE +MS++G +P ++ ++N Y
Sbjct: 227 ISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYY 265
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 109/252 (43%), Gaps = 35/252 (13%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
+ YN LI G C G IE+A L M G +P+ VTY LLN ++ +
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAE 280
Query: 89 MRMNGV---------------RVGH--------------------ISYTAMIDGLCKNRL 113
M +G+ RV H +SY+ +I+ C+
Sbjct: 281 MVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASN 340
Query: 114 LEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYST 173
+A L ++M + + +VVT++ LI FLR G + AK+++ +M + L + I Y+T
Sbjct: 341 TRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTT 400
Query: 174 LIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMG 233
++ + CK N+ +A + M D + N L++ CRSGR+ EA + M
Sbjct: 401 ILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKE 460
Query: 234 LDPSTSAFDCII 245
P F II
Sbjct: 461 CCPDELTFKFII 472
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 93/188 (49%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ ++Y+TLI+ C N +A+RL +EM G+ N VTY +L+ + + L
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
++M G+ I YT ++D LCK+ +++A + +DM++ I PD ++++ LI+G R+
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G++ A ++ M + + + +I + + L A + M G D
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVS 503
Query: 207 NVLVATFC 214
+ L+ C
Sbjct: 504 DTLIKASC 511
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
++ N +TY +LI +GN A +LLD+M GL P+ + Y +L+ L K
Sbjct: 356 MVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAY 415
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
M + + ISY ++I GLC++ + EA+ L +DM PD +TF +I G
Sbjct: 416 GVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGL 475
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKM 181
+R K++ A ++ +M L+ + TLI C M
Sbjct: 476 IRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSM 513
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 94/219 (42%), Gaps = 2/219 (0%)
Query: 30 TYNTLIDGHCSKGNIEEAFR-LLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
+YN L+ HC + ++ + ++ EM G + V+Y L+ + S E
Sbjct: 292 SYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEE 350
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
MR G+ + ++YT++I + A LLD M + ++PD + ++ +++ ++G
Sbjct: 351 MRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGN 410
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
++ A + M + + + I Y++LI C+ + EA+ + M D T
Sbjct: 411 VDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKF 470
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
++ R +L A D M G D +I +
Sbjct: 471 IIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKA 509
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 80/133 (60%)
Query: 99 ISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCK 158
I+Y +MIDG CK +++A +LD M +PDVVTFS LING+ +A +++N EI C+
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 159 MYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGR 218
M++ +V N + Y+TLI+ +C++ +L A + M G D+ T + ++A C
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 219 LKEAEYFMDHMSR 231
L++A ++ + +
Sbjct: 131 LRKAFAILEDLQK 143
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 75/141 (53%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
+++ P ITYN++IDG C + +++A R+LD M S G P+ VT+ L+NG K +
Sbjct: 4 WSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDN 63
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
M G+ ++YT +I G C+ L+ A LL++M+ + PD +TF ++
Sbjct: 64 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLA 123
Query: 142 GFLRAGKINNAKEIMCKMYKT 162
G ++ A I+ + K+
Sbjct: 124 GLCSKKELRKAFAILEDLQKS 144
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 70/135 (51%)
Query: 124 MLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRN 183
ML+ SI P +T++ +I+GF + ++++AK ++ M + + +STLI YCK +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 184 LKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDC 243
+ + + M+ G V++ T L+ FC+ G L A+ ++ M G+ P F C
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 244 IINSYGNSGDALKAF 258
++ + + KAF
Sbjct: 121 MLAGLCSKKELRKAF 135
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 76/150 (50%), Gaps = 3/150 (2%)
Query: 54 MVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRL 113
M+ + P +TY ++++G K + L+ M G ++++ +I+G CK +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 114 LEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYST 173
++ + + +M + I + VT++ LI+GF + G ++ A++++ +M + + I +
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 174 LIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
++ C + L++A +A++ DH
Sbjct: 121 MLAGLCSKKELRKA---FAILEDLQKSEDH 147
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 118/230 (51%), Gaps = 3/230 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TYN+LI G + +L DEM+ GL P+ +Y L++ K + G
Sbjct: 81 PDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKI 140
Query: 86 L-ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L E + + G+ G +Y ++D LCK+ + A+ L LK+ + P+++T+++LING
Sbjct: 141 LHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKH-LKSRVKPELMTYNILINGLC 199
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
++ ++ + +M ++ K+ N + Y+T++ Y K + +++ L + M G+ D F
Sbjct: 200 KSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGF 259
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGL-DPSTSAFDCIINSYGNSGD 253
+V+ ++GR +EA M + R G +++ ++N Y G+
Sbjct: 260 ANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGN 309
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 2/238 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+P TYN L+D C G+ + A L + S +KP +TY L+NGL K + G V
Sbjct: 150 LVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVD 208
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ ++ +G ++YT M+ K + +E+ + L M K D +++
Sbjct: 209 WMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSAL 268
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNIL-YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
++ G+ A E M ++ ++ +I+ Y+TL+ Y K NL + + G D
Sbjct: 269 IKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPD 328
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+T ++V G AE + + MG+ PS +C+I+ +G +A L
Sbjct: 329 DYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRL 386
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 106/218 (48%), Gaps = 2/218 (0%)
Query: 32 NTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRM 91
N ++ C N+E A LL + + G+ P+ +TY L+ G ++ + RMR
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMRE 76
Query: 92 NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINN 151
G+ +Y ++I G KN +L + L D+ML + ++PD+ +++ L++ + + G+
Sbjct: 77 AGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGE 136
Query: 152 AKEIMCK-MYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLV 210
A +I+ + ++ LV Y+ L+ CK + A+ + + S + T N+L+
Sbjct: 137 AFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLK-SRVKPELMTYNILI 195
Query: 211 ATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
C+S R+ ++ M + + G P+ + ++ Y
Sbjct: 196 NGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMY 233
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 99/222 (44%), Gaps = 5/222 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY T++ + IE+ +L +M G + A+++ L K +
Sbjct: 221 PNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYEC 280
Query: 86 LERMRMNGVRVGHI-SYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
+ + +G R I SY +++ K+ L+ LL+++ + PD T ++++NG L
Sbjct: 281 MHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLL 340
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
G A++ + + + + + + + LI CK ++ A+ +A M V D F
Sbjct: 341 NIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM----EVRDEF 396
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
T +V C+ GRL A + G+ +SA +++
Sbjct: 397 TYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLS 438
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 110/236 (46%), Gaps = 3/236 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TY+ LID + + G E A +L EM + ++PN + LL G ++
Sbjct: 372 PDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQV 431
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L+ M+ GV+ Y +ID K L+ A+ D ML I PD VT++ LI+ +
Sbjct: 432 LKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCK 491
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G+ A+E+ M + + Y+ +I +Y + M G + + T
Sbjct: 492 HGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVT 551
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG---DALKAF 258
LV + +SGR +A ++ M +GL PS++ ++ +IN+Y G A+ AF
Sbjct: 552 HTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 607
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 95/222 (42%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
T ++I G EA L +E+ G+KP Y ALL G K S + M
Sbjct: 306 TLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM 365
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
GV +Y+ +ID E A +L +M + P+ FS L+ GF G+
Sbjct: 366 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEW 425
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
+++ +M + + Y+ +I + K L A+ T+ M G D T N L
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 485
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS 251
+ C+ GR AE + M R G P + ++ +INSYG+
Sbjct: 486 IDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQ 527
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 111/236 (47%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
++ PN ++ L+ G +G ++ F++L EM S G+KP+ Y +++ K +
Sbjct: 404 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 463
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+T +RM G+ +++ +ID CK+ A + + M + P T++++IN
Sbjct: 464 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 523
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+ + ++ K ++ KM ++ N + ++TL+ Y K +A+ M G
Sbjct: 524 YGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPS 583
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
N L+ + + G ++A M+ GL PS A + +IN++G +AF
Sbjct: 584 STMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 639
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 102/227 (44%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S + P+ YN +ID ++ A D M+S G++P+ VT+ L++ KH +
Sbjct: 437 SIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHI 496
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ E M G +Y MI+ ++ LL M I P+VVT + L+
Sbjct: 497 VAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLV 556
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+ + ++G+ N+A E + +M L ++ +Y+ LI Y + ++A+N + VM G
Sbjct: 557 DVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLK 616
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
N L+ F R EA + +M G+ P + ++ +
Sbjct: 617 PSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKA 663
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S +LPN +T+ TL+D + G +A L+EM S GLKP+ Y AL+N ++
Sbjct: 542 SQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSE 601
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ M +G++ ++ ++I+ ++R EA +L M + + PDVVT++ L+
Sbjct: 602 QAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLM 661
Query: 141 NGFLRAGKINNAKEIMCKM 159
+R K + +M
Sbjct: 662 KALIRVDKFQKVPVVYEEM 680
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 10/220 (4%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T+NTLID HC G A + + M G P TY ++N ++ +
Sbjct: 477 PDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRL 536
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L +M+ G+ +++T ++D K+ +A+ L++M + P ++ LIN + +
Sbjct: 537 LGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQ 596
Query: 146 AG---KINNAKEIMCK--MYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G + NA +M + ++L LN +LI + + R EA M +G
Sbjct: 597 RGLSEQAVNAFRVMTSDGLKPSLLALN-----SLINAFGEDRRDAEAFAVLQYMKENGVK 651
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSA 240
D T L+ R + ++ + M G P A
Sbjct: 652 PDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKA 691
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 109/236 (46%), Gaps = 10/236 (4%)
Query: 29 ITYNTLIDGHCSKGN-IEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV----- 82
+TYN LI G C++ N IE+A L+ +M G + + V Y ++ L++ +K V
Sbjct: 198 LTYNALI-GACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRL 256
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ER ++ + V ++ +I G K+ +A+ LL ++ T +I+
Sbjct: 257 YKEIERDKLE-LDVQLVN--DIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISA 313
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+G+ A+ + ++ ++ + Y+ L+ Y K LK+A + + M G D
Sbjct: 314 LADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD 373
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
T ++L+ + +GR + A + M + P++ F ++ + + G+ K F
Sbjct: 374 EHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S L P+ YN LI+ + +G E+A M S GLKP+ + +L+N + +
Sbjct: 577 SVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDA 636
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
+ L+ M+ NGV+ ++YT ++ L + ++ + ++M+ + PD S+L
Sbjct: 637 EAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSML 695
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TYN+LI C ++ +A LL++M+ ++PN VT+G L+ GL ++
Sbjct: 219 PSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKL 278
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M G + G ++Y ++ L K ++EA LL +M K I PDVV +++L+N
Sbjct: 279 MFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCT 338
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
++ A ++ +M N Y +I +C++ + LN M S H T
Sbjct: 339 ECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPAT 398
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFD 242
+VA + G L A + ++ M + L + A+
Sbjct: 399 FVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQ 435
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 112/237 (47%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L PN +++N LI G K + E A ++ DEM+ ++P+ VTY +L+ L ++ G
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
S LE M +R +++ ++ GLC EA L+ DM P +V + +L++
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G+I+ AK ++ +M K + + ++Y+ L+ + C + EA M G +
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNA 361
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
T +++ FCR ++ M P+ + F C++ G+ A F+
Sbjct: 362 ATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFV 418
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
SF+ + + NTLI+ G +E+A D L+PN V++ L+ G +
Sbjct: 144 SFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWE 203
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ M V+ ++Y ++I LC+N + +A LL+DM+K I P+ VTF +L+
Sbjct: 204 AACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLM 263
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G G+ N AK++M M + Y L+ + K + EA M
Sbjct: 264 KGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIK 323
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
D N+LV C R+ EA + M G P+ + + +I+ +
Sbjct: 324 PDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGF 371
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P + Y L+ +G I+EA LL EM +KP+ V Y L+N L +
Sbjct: 289 PGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRV 348
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L M+M G + +Y MIDG C+ + +++L+ ML + P TF ++ G ++
Sbjct: 349 LTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIK 408
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYC 179
G +++A ++ M K L + + L+ + C
Sbjct: 409 GGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 89/213 (41%)
Query: 34 LIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNG 93
LI + G++++A + ++ S + L+N L + + S + +
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 94 VRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAK 153
+R +S+ +I G E A + D+ML+ + P VVT++ LI R + AK
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 154 EIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATF 213
++ M K + N + + L+ C EA M + G +L++
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 214 CRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
+ GR+ EA+ + M + + P ++ ++N
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVN 334
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 110/236 (46%), Gaps = 2/236 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TYN LID + S G + EA + +M G+KPN V+ LL S+ K V +
Sbjct: 291 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 350
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L + G+ + +Y + I LE+A+ L M K + D VTF++LI+G R
Sbjct: 351 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 410
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
K A + +M + L +YS+++ Y K + EA + + M +G D
Sbjct: 411 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIA 470
Query: 206 CNVLVATFCRSGRLKEA-EYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
++ + S + +A E F++ M G++P + A ++ ++ G F L
Sbjct: 471 YTSMLHAYNASEKWGKACELFLE-MEANGIEPDSIACSALMRAFNKGGQPSNVFVL 525
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 104/234 (44%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L PN ++YN L+ + G A +L ++ +G+ P+ V+Y LLN + + G
Sbjct: 219 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 278
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
MR + ++Y A+ID N L EAV + M + I P+VV+ L+
Sbjct: 279 EVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 338
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
R+ K N ++ + LN Y++ I +Y L++A+ Y M +D
Sbjct: 339 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 398
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
T +L++ CR + EA ++ M + + + + ++ +Y G +A
Sbjct: 399 VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEA 452
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 35/235 (14%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +T+ +++ + KG IE + + MV+ GLKPN V+Y AL+ + H
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHG-------- 237
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M+G A+ +L D+ + I PDVV+++ L+N + R
Sbjct: 238 -----MSGT----------------------ALSVLGDIKQNGIIPDVVSYTCLLNSYGR 270
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+ + AKE+ M K N + Y+ LI Y L EA+ + M G + +
Sbjct: 271 SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 330
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
L+A RS + + + G++ +T+A++ I SY N+ + KA L
Sbjct: 331 VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIAL 385
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 110/231 (47%), Gaps = 2/231 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ P+ TYN LI+ S GN EA + +M +G+ P+ VT+ +L+ ++
Sbjct: 77 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 136
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDML--KASINPDVVTFSVLIN 141
S E M+ VR ++ +I L K +A+ L + M +A PDVVTF+ +++
Sbjct: 137 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 196
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
+ G+I N + + M L N + Y+ L+ Y AL+ + +G +
Sbjct: 197 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 256
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
D + L+ ++ RS + +A+ M + P+ ++ +I++YG++G
Sbjct: 257 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 307
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 102/234 (43%), Gaps = 2/234 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TY+ LI+ H G A L+D+M+ + P+ TY L+N +
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 103
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++M NGV +++ ++ R +A+ + M A + PD TF+++I +
Sbjct: 104 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 163
Query: 146 AGKINNAKEIMCKMY--KTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
G+ + A ++ M + + + ++++++ Y ++ + M G +
Sbjct: 164 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 223
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ N L+ + G A + + + G+ P ++ C++NSYG S KA
Sbjct: 224 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 277
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 3/161 (1%)
Query: 101 YTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMY 160
Y MI ++ +++A L +M K S PD T+ LIN RAG+ A +M M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 161 KTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLK 220
+ + + Y+ LI N +EAL M +G D T N++++ + +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 221 EAEYFMDHMSRMGLDPSTSAFDCII---NSYGNSGDALKAF 258
+A + + M + P T+ F+ II + G S AL F
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLF 174
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 97/230 (42%), Gaps = 5/230 (2%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
YN +I H +++A L EM KP+ TY AL+N + ++ + ++ M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
+ +Y +I+ + EA+ + M + PD+VT +++++ + + +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV--SDHFTCNV 208
A M + + ++ +IY K+ +AL+ + M D T
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY---GNSGDAL 255
++ + G ++ + M GL P+ +++ ++ +Y G SG AL
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTAL 243
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 2/195 (1%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +T+ LI G C EA L EM + + Y ++L SK + S
Sbjct: 397 DSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIF 456
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+M+M G I+YT+M+ + +A L +M I PD + S L+ F +
Sbjct: 457 NQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKG 516
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMN-HSGHVSDHFT 205
G+ +N +M M + + ++ + ++ K A++ +M+ + +S T
Sbjct: 517 GQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLT 576
Query: 206 CNVLVATFCRSGRLK 220
N ++ F +SG+++
Sbjct: 577 -NQMLHLFGKSGKVE 590
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 105/232 (45%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN YNT+++G+ G++++A R M KP+ T+ L+NG + SKF L
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M+ G +S+ +I G + +EE V + +M++ T +L++G R
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G++++A ++ + ++ + Y +L+ C A+ + G
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIA 370
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
C LV +SGR ++A FM+ M G+ P + F+ ++ +S + A
Sbjct: 371 CTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDA 422
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 111/231 (48%), Gaps = 8/231 (3%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF----GL 81
PN +++NTLI G S G IEE ++ EM+ G + +E T L++GL + + GL
Sbjct: 261 PNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGL 320
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
V L + V Y ++++ LC A+ +++++ K P + + L+
Sbjct: 321 VLDLLNKR----VLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVE 376
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
G ++G+ A M KM ++ +++ ++ L+ + C + +A + + G+
Sbjct: 377 GLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEP 436
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
D T +VLV+ F + GR KE E ++ M + P ++ +++ +G
Sbjct: 437 DETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTG 487
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 69/152 (45%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+LP+ Y +L++ C + A +++E+ G P + L+ GL K + S
Sbjct: 329 VLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKAS 388
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+E+M G+ +++ ++ LC + +A L PD T+ VL++GF
Sbjct: 389 GFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGF 448
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLI 175
+ G+ + ++ +M ++ + Y+ L+
Sbjct: 449 TKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLM 480
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 12/134 (8%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGL--SKHSKFGLVS 83
P I TL++G G E+A +++M++ G+ P+ VT+ LL L S HS
Sbjct: 366 PCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHS------ 419
Query: 84 STLERMRM----NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
+ R+R+ G +Y ++ G K +E L+++ML + PD+ T++ L
Sbjct: 420 TDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRL 479
Query: 140 INGFLRAGKINNAK 153
++G GK + +
Sbjct: 480 MDGLSCTGKFSRKQ 493
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 109/215 (50%), Gaps = 8/215 (3%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S ++P+ Y L++ C +GN+ A +L+++M HG N VTY AL+ GL
Sbjct: 134 SSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLN 193
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ER+ G+ +Y+ +++ K R +EAV LLD+++ P++V+++VL+
Sbjct: 194 QSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLL 253
Query: 141 NGFLRAGKINNA----KEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNH 196
GF + G+ ++A +E+ K +K +V NIL L C +EA + A M+
Sbjct: 254 TGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCL----CCDGRWEEANSLLAEMDG 309
Query: 197 SGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSR 231
T N+L+ + GR ++A + MS+
Sbjct: 310 GDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSK 344
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 111/236 (47%), Gaps = 3/236 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN L+ C +++A R+++ MVS G+ P+ Y L+N L K G
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL 163
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+E+M +G ++Y A++ GLC L +++ ++ +++ + P+ T+S L+ +
Sbjct: 164 VEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYK 223
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+ A +++ ++ N + Y+ L+ +CK +A+ + + G ++ +
Sbjct: 224 ERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVS 283
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS---YGNSGDALKAF 258
N+L+ C GR +EA + M PS ++ +INS +G + AL+
Sbjct: 284 YNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVL 339
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 5/203 (2%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
+YN +I C +G ++ + LDEM+ KPNE TY A+ + +SK ++ +
Sbjct: 355 SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSL 414
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
H Y ++I LC+ A LL +M + +PD T+S LI G G
Sbjct: 415 SNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMF 474
Query: 150 NNAKEIMCKMYKTV---LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
A E++ M ++ ++N ++ +I CK+R A+ + +M + + T
Sbjct: 475 TGAMEVLSIMEESENCKPTVDN--FNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTY 532
Query: 207 NVLVATFCRSGRLKEAEYFMDHM 229
+LV L+ A+ +D +
Sbjct: 533 AILVEGIAHEDELELAKEVLDEL 555
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 95/210 (45%)
Query: 36 DGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVR 95
D + N+ ++F L+ +V+ G KPN LL L K ++ +E M +G+
Sbjct: 79 DPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGII 138
Query: 96 VGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEI 155
+YT +++ LCK + A+ L++ M + VT++ L+ G G +N + +
Sbjct: 139 PDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQF 198
Query: 156 MCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCR 215
+ ++ + L N YS L+ K R EA+ + G + + NVL+ FC+
Sbjct: 199 VERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCK 258
Query: 216 SGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
GR +A + G + +++ ++
Sbjct: 259 EGRTDDAMALFRELPAKGFKANVVSYNILL 288
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 81/193 (41%), Gaps = 2/193 (1%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N ++YN L+ C G EEA LL EM P+ VTY L+N L+ H + L
Sbjct: 280 NVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVL 339
Query: 87 ERMRM--NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
+ M + RV SY +I LCK ++ V LD+M+ P+ T++ + +
Sbjct: 340 KEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCE 399
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
K+ A I+ + + Y ++I + C+ N A M G D
Sbjct: 400 HNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAH 459
Query: 205 TCNVLVATFCRSG 217
T + L+ C G
Sbjct: 460 TYSALIRGLCLEG 472
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 83/178 (46%), Gaps = 3/178 (1%)
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
S LE + G + T ++ LCK L++A+ +++ M+ + I PD ++ L+N
Sbjct: 92 SHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQL 151
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G + A +++ KM N + Y+ L+ C + +L ++L + G +
Sbjct: 152 CKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNA 211
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY---GNSGDALKAF 258
FT + L+ + EA +D + G +P+ +++ ++ + G + DA+ F
Sbjct: 212 FTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALF 269
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 97.1 bits (240), Expect = 1e-20, Method: Composition-based stats.
Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 2/236 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TYN LID + S G + EA + +M G+KPN V+ LL S+ K V +
Sbjct: 423 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 482
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L + G+ + +Y + I LE+A+ L M K + D VTF++LI+G R
Sbjct: 483 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 542
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
K A + +M + L +YS+++ Y K + EA + + M +G D
Sbjct: 543 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIA 602
Query: 206 CNVLVATFCRSGRL-KEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
++ + S + K E F++ M G++P + A ++ ++ G F L
Sbjct: 603 YTSMLHAYNASEKWGKACELFLE-MEANGIEPDSIACSALMRAFNKGGQPSNVFVL 657
Score = 94.4 bits (233), Expect = 7e-20, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 104/234 (44%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L PN ++YN L+ + G A +L ++ +G+ P+ V+Y LLN + + G
Sbjct: 351 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 410
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
MR + ++Y A+ID N L EAV + M + I P+VV+ L+
Sbjct: 411 EVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 470
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
R+ K N ++ + LN Y++ I +Y L++A+ Y M +D
Sbjct: 471 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 530
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
T +L++ CR + EA ++ M + + + + ++ +Y G +A
Sbjct: 531 VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEA 584
Score = 80.1 bits (196), Expect = 1e-15, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 110/231 (47%), Gaps = 2/231 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ P+ TYN LI+ S GN EA + +M +G+ P+ VT+ +L+ ++
Sbjct: 209 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 268
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDML--KASINPDVVTFSVLIN 141
S E M+ VR ++ +I L K +A+ L + M +A PDVVTF+ +++
Sbjct: 269 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 328
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
+ G+I N + + M L N + Y+ L+ Y AL+ + +G +
Sbjct: 329 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 388
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
D + L+ ++ RS + +A+ M + P+ ++ +I++YG++G
Sbjct: 389 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 439
Score = 77.4 bits (189), Expect = 8e-15, Method: Composition-based stats.
Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 2/237 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSH--GLKPNEVTYGALLNGLSKHSKFGLVS 83
P+ T+N +I G +A L + M +P+ VT+ ++++ S +
Sbjct: 281 PDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCR 340
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ E M G++ +SY A++ + + A+ +L D+ + I PDVV+++ L+N +
Sbjct: 341 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 400
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
R+ + AKE+ M K N + Y+ LI Y L EA+ + M G +
Sbjct: 401 GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNV 460
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+ L+A RS + + + G++ +T+A++ I SY N+ + KA L
Sbjct: 461 VSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIAL 517
Score = 74.7 bits (182), Expect = 6e-14, Method: Composition-based stats.
Identities = 50/240 (20%), Positives = 105/240 (43%), Gaps = 5/240 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TY+ LI+ H G A L+D+M+ + P+ TY L+N +
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++M NGV +++ ++ R +A+ + M A + PD TF+++I +
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 295
Query: 146 AGKINNAKEIMCKMY--KTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
G+ + A ++ M + + + ++++++ Y ++ + M G +
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNI 355
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS---GDALKAFFL 260
+ N L+ + G A + + + G+ P ++ C++NSYG S G A + F +
Sbjct: 356 VSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 415
Score = 58.2 bits (139), Expect = 6e-09, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 101 YTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMY 160
Y MI ++ +++A L +M K S PD T+ LIN RAG+ A +M M
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 161 KTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGR-L 219
+ + + Y+ LI N +EAL M +G D T N++++ + +SGR
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY-KSGRQY 264
Query: 220 KEAEYFMDHMSRMGLDPSTSAFDCII---NSYGNSGDALKAF 258
+A + + M + P T+ F+ II + G S AL F
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLF 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/230 (20%), Positives = 98/230 (42%), Gaps = 5/230 (2%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
YN +I H +++A L EM KP+ TY AL+N + ++ + ++ M
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
+ +Y +I+ + EA+ + M + PD+VT +++++ + + +
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVM--NHSGHVSDHFTCNV 208
A M + + ++ +IY K+ +AL+ + M + D T
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY---GNSGDAL 255
++ + G ++ + M GL P+ +++ ++ +Y G SG AL
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTAL 375
Score = 56.6 bits (135), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 2/195 (1%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +T+ LI G C EA L EM + + Y ++L SK + S
Sbjct: 529 DSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIF 588
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+M+M G I+YT+M+ + +A L +M I PD + S L+ F +
Sbjct: 589 NQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKG 648
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMN-HSGHVSDHFT 205
G+ +N +M M + + ++ + ++ K A++ +M+ + +S T
Sbjct: 649 GQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLT 708
Query: 206 CNVLVATFCRSGRLK 220
N ++ F +SG+++
Sbjct: 709 -NQMLHLFGKSGKVE 722
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 97.1 bits (240), Expect = 1e-20, Method: Composition-based stats.
Identities = 59/235 (25%), Positives = 113/235 (48%), Gaps = 6/235 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN T T+++G+C +G +EEA R M G+ PN + +L+ G + V
Sbjct: 529 PNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEV 588
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++ M GV+ ++++ +++ ++ + DML+ I+PD+ FS+L G+ R
Sbjct: 589 VDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYAR 648
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AG+ A++I+ +M K + N ++Y+ +I +C +K+A+ Y M +S + T
Sbjct: 649 AGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLT 708
Query: 206 C-NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY-----GNSGDA 254
L+ F + + +AE + M + P+ I + + NS DA
Sbjct: 709 TYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVSNSNDA 763
Score = 97.1 bits (240), Expect = 1e-20, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 107/232 (46%), Gaps = 2/232 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ I +N +I+ GN+++A ++ ++M G KP T+ L+ G K K S
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 84 STLERM-RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
L+ M R ++ + ++ C R +EEA +++ M + PDVVTF+ L
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Query: 143 FLRAGKINNAKE-IMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
+ R G A++ I+ +M + N T++ YC+ ++EAL + M G
Sbjct: 505 YARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHP 564
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
+ F N L+ F + +D M G+ P F ++N++ + GD
Sbjct: 565 NLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGD 616
Score = 96.3 bits (238), Expect = 2e-20, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 119/235 (50%), Gaps = 1/235 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSK-HSKFGLV 82
L PN T N L+ C++ IEEA+ ++ +M S+G+KP+ VT+ L ++ S
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAE 515
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ RM N V+ + +++G C+ +EEA+ M + ++P++ F+ LI G
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG 575
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
FL ++ E++ M + + + + +STL+ + + ++K Y M G D
Sbjct: 576 FLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPD 635
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
++L + R+G ++AE ++ M + G+ P+ + II+ + ++G+ KA
Sbjct: 636 IHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKA 690
Score = 92.0 bits (227), Expect = 4e-19, Method: Composition-based stats.
Identities = 58/231 (25%), Positives = 112/231 (48%), Gaps = 5/231 (2%)
Query: 34 LIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNG 93
L++G +G +EA + + ++ G KP+ +TY L+ L++ F + S + ++ NG
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 94 VRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAK 153
++ I + A+I+ ++ L++A+ + + M ++ P TF+ LI G+ + GK+ +
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 154 EIMCKMYK-TVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVAT 212
++ M + +L N+ + L+ +C R ++EA N M G D T N L
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Query: 213 FCRSGRLKEAE-YFMDHMSRMGLDPSTSAFDCIINSYGNSG---DALKAFF 259
+ R G AE + M + P+ I+N Y G +AL+ F+
Sbjct: 505 YARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFY 555
Score = 89.4 bits (220), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 110/230 (47%), Gaps = 2/230 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ ITY TL+ + + L+ ++ +GLKP+ + + A++N S+
Sbjct: 352 PSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 411
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKAS-INPDVVTFSVLINGFL 144
E+M+ +G + ++ +I G K LEE+ LLD ML+ + P+ T ++L+ +
Sbjct: 412 FEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWC 471
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNT-YAVMNHSGHVSDH 203
KI A I+ KM + + + ++TL Y ++ + A + M H+ +
Sbjct: 472 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNV 531
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
TC +V +C G+++EA F M +G+ P+ F+ +I + N D
Sbjct: 532 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Score = 60.5 bits (145), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F + P+ +T++TL++ S G+++ + +M+ G+ P+ + L G ++ +
Sbjct: 595 FGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEK 654
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLK-ASINPDVVTFSVLI 140
L +MR GVR + YT +I G C +++A+ + M ++P++ T+ LI
Sbjct: 655 AEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLI 714
Query: 141 NGFLRAGKINNAKEIMCKM 159
GF A + A+E++ M
Sbjct: 715 WGFGEAKQPWKAEELLKDM 733
Score = 56.2 bits (134), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 100 SYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKM 159
S T +++GL + +EA + + +++ P ++T++ L+ R ++ ++ K+
Sbjct: 321 SRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKV 380
Query: 160 YKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRL 219
K L + IL++ +I + NL +A+ + M SG T N L+ + + G+L
Sbjct: 381 EKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKL 440
Query: 220 KEAEYFMDHMSR-MGLDPSTSAFDCIINSYGN 250
+E+ +D M R L P+ + ++ ++ N
Sbjct: 441 EESSRLLDMMLRDEMLQPNDRTCNILVQAWCN 472
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 98/197 (49%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ +Y LI + G E+A+ +EM G+KP+ TY ++L+ + G +
Sbjct: 481 LKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLM 540
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ M ++ I+Y ++DG K L EA ++ + K + P V+T+++L+N +
Sbjct: 541 EIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAY 600
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
R G+ +++ +M L ++I YST+IY + ++R+ K A + +M SG V D
Sbjct: 601 ARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDP 660
Query: 204 FTCNVLVATFCRSGRLK 220
+ L A + K
Sbjct: 661 RSYEKLRAILEDKAKTK 677
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 1/237 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG-LV 82
L P+ TYN L+D + + + LL EM GL+PN +Y L++ + K +
Sbjct: 410 LKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMA 469
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ RM+ G++ SYTA+I + E+A ++M K I P V T++ +++
Sbjct: 470 ADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDA 529
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
F R+G EI M + + I Y+TL+ + K EA + + + G
Sbjct: 530 FRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPS 589
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFF 259
T N+L+ + R G+ + + M+ + L P + + +I ++ D +AFF
Sbjct: 590 VMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFF 646
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
Query: 23 NLLPNCITYNTLIDGHCSKG-NIEEAFRLLDEMVSHGLKPNEVTYGALL-----NGLSKH 76
N+ P+ +T LI G + +E + + ++M G+K ++ +G L+ GL +
Sbjct: 303 NVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEE 362
Query: 77 SKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTF 136
+ LV T M G+R I Y ++D K+ +EE L +M + P T+
Sbjct: 363 A---LVIQT--EMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATY 417
Query: 137 SVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKE-ALNTYAVMN 195
++L++ + R + + + ++ +M L N Y+ LI Y + + + + A + + M
Sbjct: 418 NILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMK 477
Query: 196 HSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDAL 255
G + L+ + SG ++A + M + G+ PS + +++++ SGD
Sbjct: 478 KVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTG 537
Query: 256 K 256
K
Sbjct: 538 K 538
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 1/187 (0%)
Query: 66 YGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCK-NRLLEEAVHLLDDM 124
Y A ++GLS ++ E M V +++ +I L K R +E + + M
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 125 LKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNL 184
+ + F L+ F G A I +M K + N I+Y+TL+ Y K ++
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 185 KEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCI 244
+E + M G T N+L+ + R + E + M +GL+P+ ++ C+
Sbjct: 396 EEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCL 455
Query: 245 INSYGNS 251
I++YG +
Sbjct: 456 ISAYGRT 462
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
ITYNTL+DG +G EA ++ E GL+P+ +TY L+N ++ + + L+
Sbjct: 556 ITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKE 615
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
M ++ I+Y+ MI + R + A M+K+ PD ++ L K
Sbjct: 616 MAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAK 675
Query: 149 INNAKE 154
N K+
Sbjct: 676 TKNRKD 681
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 115/233 (49%), Gaps = 1/233 (0%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S + P+ T+ + + + S G ++A +L M HG + ++ +L+ L K +
Sbjct: 119 SLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVE 178
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+R V ++Y +++G C + +A+ +L +M++ INP++ T++ ++
Sbjct: 179 KAYELFRALR-GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTML 237
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
GF RAG+I +A E +M K ++ + Y+T+++ + +K A N + M G +
Sbjct: 238 KGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVL 297
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
T N ++ C+ ++ A + M R G +P+ + ++ +I ++G+
Sbjct: 298 PSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGE 350
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 1/231 (0%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
++NT++D C +E+A+ L + + VTY +LNG + L+ M
Sbjct: 163 SFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEM 221
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
G+ +Y M+ G + + A +M K DVVT++ +++GF AG+I
Sbjct: 222 VERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEI 281
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A+ + +M + ++ + Y+ +I CK N++ A+ + M G+ + T NVL
Sbjct: 282 KRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVL 341
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+ +G E M M G +P+ ++ +I Y + KA L
Sbjct: 342 IRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGL 392
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN TYNT++ G G I A+ EM + + VTY +++G + +
Sbjct: 228 PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M GV +Y AMI LCK +E AV + ++M++ P+V T++VLI G
Sbjct: 288 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 347
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AG+ + +E+M +M N Y+ +I Y + +++AL + M + + T
Sbjct: 348 AGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDT 407
Query: 206 CNVLVA 211
N+L++
Sbjct: 408 YNILIS 413
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+LP+ TYN +I C K N+E A + +EMV G +PN TY L+ GL +F
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 355
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING- 142
++RM G +Y MI + +E+A+ L + M P++ T+++LI+G
Sbjct: 356 ELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Query: 143 FLR--------AGKINNAKEIM 156
F+R AG AKEI+
Sbjct: 416 FVRKRSEDMVVAGNQAFAKEIL 437
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 96.3 bits (238), Expect = 2e-20, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 107/232 (46%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ I YN +I C GN++ A + + EM +P T+ +++G +K
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV 611
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ MR G ++ +I+GL + R +E+AV +LD+M A ++ + T++ ++ G+
Sbjct: 612 FDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS 671
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G A E ++ L ++ Y L+ CK ++ AL M+ + F
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 731
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
N+L+ + R G + EA + M + G+ P + I++ +GD +A
Sbjct: 732 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA 783
Score = 95.1 bits (235), Expect = 4e-20, Method: Composition-based stats.
Identities = 59/231 (25%), Positives = 113/231 (48%), Gaps = 6/231 (2%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLE--- 87
Y+T++DG+ + ++ + + G P VTYG L+N ++K G +S LE
Sbjct: 452 YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLIN---LYTKVGKISKALEVSR 508
Query: 88 RMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAG 147
M+ GV+ +Y+ MI+G K + A + +DM+K + PDV+ ++ +I+ F G
Sbjct: 509 VMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMG 568
Query: 148 KINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCN 207
++ A + + +M K + +I+ Y K +++ +L + +M G V T N
Sbjct: 569 NMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFN 628
Query: 208 VLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
L+ ++++A +D M+ G+ + + I+ Y + GD KAF
Sbjct: 629 GLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAF 679
Score = 89.0 bits (219), Expect = 3e-18, Method: Composition-based stats.
Identities = 55/223 (24%), Positives = 107/223 (47%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
+P T+N LI+G K +E+A +LDEM G+ NE TY ++ G + G
Sbjct: 621 VPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 680
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
R++ G+ V +Y A++ CK+ ++ A+ + +M +I + +++LI+G+
Sbjct: 681 YFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 740
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
R G + A +++ +M K + + Y++ I K ++ A T M G +
Sbjct: 741 RRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIK 800
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
T L+ + R+ ++A + M MG+ P + + C++ S
Sbjct: 801 TYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS 843
Score = 86.7 bits (213), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/231 (22%), Positives = 107/231 (46%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N TY+ +I+G + AF + ++MV G+KP+ + Y +++ T+
Sbjct: 518 NLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTV 577
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+ M+ R ++ +I G K+ + ++ + D M + P V TF+ LING +
Sbjct: 578 KEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEK 637
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
++ A EI+ +M + N Y+ ++ Y + + +A + + + G D FT
Sbjct: 638 RQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTY 697
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
L+ C+SGR++ A MS + ++ ++ +I+ + GD +A
Sbjct: 698 EALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEA 748
Score = 74.3 bits (181), Expect = 8e-14, Method: Composition-based stats.
Identities = 46/233 (19%), Positives = 99/233 (42%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P T+ +I G+ G++ + + D M G P T+ L+NGL + +
Sbjct: 587 PTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEI 646
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L+ M + GV +YT ++ G +A + ++ D+ T+ L+ +
Sbjct: 647 LDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCK 706
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+G++ +A + +M + N+ +Y+ LI + + ++ EA + M G D T
Sbjct: 707 SGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHT 766
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
++ ++G + A ++ M +G+ P+ + +I + + KA
Sbjct: 767 YTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKAL 819
Score = 73.9 bits (180), Expect = 9e-14, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 110/270 (40%), Gaps = 35/270 (12%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSK-------- 75
+ P Y +LI + +++EA + +M G++ + VTY ++ G SK
Sbjct: 340 ITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAAD 399
Query: 76 --------------HSKFGLV------SSTLER-------MRMNGVRVGHISYTAMIDGL 108
S +G + + +ER M G+ Y M+DG
Sbjct: 400 YWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGY 459
Query: 109 CKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNN 168
++ + + + + P VVT+ LIN + + GKI+ A E+ M + + N
Sbjct: 460 TMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNL 519
Query: 169 ILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDH 228
YS +I + K+++ A + M G D N +++ FC G + A +
Sbjct: 520 KTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKE 579
Query: 229 MSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
M ++ P+T F II+ Y SGD ++
Sbjct: 580 MQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Score = 73.2 bits (178), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 63/130 (48%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N+ N YN LIDG +G++ EA L+ +M G+KP+ TY + ++ SK
Sbjct: 724 NIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA 783
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ T+E M GV+ +YT +I G + L E+A+ ++M I PD + L+
Sbjct: 784 TQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS 843
Query: 143 FLRAGKINNA 152
L I A
Sbjct: 844 LLSRASIAEA 853
Score = 70.9 bits (172), Expect = 9e-13, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 82/199 (41%)
Query: 60 KPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVH 119
KP+ +G ++ + T ERMR G+ YT++I R ++EA+
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 120 LLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYC 179
+ M + I +VT+SV++ GF +AG A + + LN +Y +IY +C
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 180 KMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTS 239
+ N++ A M G + + ++ + K+ + G P+
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVV 485
Query: 240 AFDCIINSYGNSGDALKAF 258
+ C+IN Y G KA
Sbjct: 486 TYGCLINLYTKVGKISKAL 504
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 115/235 (48%), Gaps = 3/235 (1%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
+ +P+ TY +++ C K + + AF ++D M GL+P Y +++ L K +
Sbjct: 540 ELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVV 599
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
T +M +G++ I+Y MI+ +N ++EA L+++++K + P T++VLI
Sbjct: 600 EAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLI 659
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+GF++ G + + + KM + L N +LY+ LI ++ K + K + + +M +
Sbjct: 660 SGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIK 719
Query: 201 SDHFTCNVLVATFCRS-GRLKEAEYFMDHMSRMGLDP--STSAFDCIINSYGNSG 252
DH L++ R+ R K+ + ++ L T I +S GN G
Sbjct: 720 HDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYG 774
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 3/177 (1%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+++PN +NT+I G+C+ G ++EA+ L+ M G+ PN VTY L+ H + G +
Sbjct: 789 SIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKS---HIEAGDI 845
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
S ++ + Y+ ++ GLC + +A+ L+ +M K+ INP+ ++ L+
Sbjct: 846 ESAIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQC 905
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
+ A +++ M + +I ++ LIY C+ + L+EA +A+M SG
Sbjct: 906 LCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGR 962
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 2/230 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ I Y +I+ + G I+EA L++E+V H L+P+ TY L++G K
Sbjct: 615 PDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQY 674
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L++M +G+ + YTA+I K + + L M + I D + + L++G R
Sbjct: 675 LDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWR 734
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH--VSDH 203
A ++++ + K L+ I L+ + N V+ + +
Sbjct: 735 AMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNL 794
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
+ N ++ +C +GRL EA ++ M + G+ P+ + ++ S+ +GD
Sbjct: 795 YLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGD 844
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 34 LIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVT-YGALLNGLSKHSKFGLVSSTLERMRMN 92
L G C G++ EA +LD + P V Y +L K + + M ++
Sbjct: 207 LFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVD 266
Query: 93 GVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNA 152
G V + YT ++ CK+ + A+ L M++ S D F+ LI+GF++ G ++
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKG 326
Query: 153 KEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV-LVA 211
+ + +M K + N Y +I +YCK N+ AL + S +S + C L+
Sbjct: 327 RVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIF 386
Query: 212 TFCRSGRLKEAEYFMDHMSRMGLDP 236
F + G + +A + M G+ P
Sbjct: 387 GFYKKGGMDKAVDLLMRMLDNGIVP 411
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 16/247 (6%)
Query: 22 FNLLPNC-------ITYNTLIDGHCSK--------GNIE-EAFRLLDEMVSHGLKPNEVT 65
+LP C + +++D C GNIE + LL E+ V
Sbjct: 420 LKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVG 479
Query: 66 YGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDML 125
+ L + S +E+M G SY ++I L + ++E+ L++ +
Sbjct: 480 LAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQ 539
Query: 126 KASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLK 185
+ PDV T+ +++N + + A I+ M + L +YS++I + K +
Sbjct: 540 ELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVV 599
Query: 186 EALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
EA T+A M SG D +++ T+ R+GR+ EA ++ + + L PS+ + +I
Sbjct: 600 EAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLI 659
Query: 246 NSYGNSG 252
+ + G
Sbjct: 660 SGFVKMG 666
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P +YN++I + IE+ L++ + P+ TY ++N L K + +
Sbjct: 510 PLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAI 569
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++ M G+R Y+++I L K + EA ML++ I PD + + ++IN + R
Sbjct: 570 IDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYAR 629
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G+I+ A E++ ++ K L ++ Y+ LI + KM +++ M G +
Sbjct: 630 NGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVL 689
Query: 206 CNVLVATFCRSGRLK 220
L+ F + G K
Sbjct: 690 YTALIGHFLKKGDFK 704
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 103/252 (40%), Gaps = 40/252 (15%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGL-----SKHSK 78
L PN + Y LI KG+ + +F L M + +K + + Y LL+GL K +
Sbjct: 683 LSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKR 742
Query: 79 FGLVSSTLERMRMNGVR-----------------------VGHIS---------YTAMID 106
+V E++ +R +G + + +I
Sbjct: 743 QVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIIT 802
Query: 107 GLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVL 166
G C L+EA + L+ M K I P++VT+++L+ + AG I +A ++ T
Sbjct: 803 GYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF---EGTNCEP 859
Query: 167 NNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFM 226
+ ++YSTL+ C + +AL M SG + + L+ C S EA +
Sbjct: 860 DQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVV 919
Query: 227 DHMSRMGLDPST 238
M+ + + P +
Sbjct: 920 KDMAALDIWPRS 931
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 4/218 (1%)
Query: 45 EEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAM 104
+EA LD +++ G P+ + +++ L +F E+++ G + +
Sbjct: 148 DEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRL 207
Query: 105 IDGLCKNRLLEEAVHLLDDMLKASINP-DVVTFSVLINGFLRAGKINNAKEIMCKMYKTV 163
GLC + L EA+ +LD + + P V + L F + G A+ + M
Sbjct: 208 FKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDG 267
Query: 164 LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAE 223
++ ++Y+ L+ YCK N+ A+ Y M D N L+ F + G L +
Sbjct: 268 YYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGR 327
Query: 224 YFMDHMSRMGLDPSTSAFDCIINSY---GNSGDALKAF 258
M + G+ + + +I SY GN AL+ F
Sbjct: 328 VMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLF 365
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 91/221 (41%), Gaps = 5/221 (2%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
Y +L C +G EA L D M G ++V Y L+ K + + RM
Sbjct: 240 YKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMV 299
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
+ + +I G K +L++ + M+K + +V T+ ++I + + G ++
Sbjct: 300 ERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVD 359
Query: 151 NAKEIMCKMYKTVLVLNNI-LYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A + + + N+ Y+ LI+ + K + +A++ M +G V DH T VL
Sbjct: 360 YALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVL 419
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGN 250
+ + LK A + + LD +I+ GN
Sbjct: 420 LKMLPKCHELKYAMVILQSI----LDNGCGINPPVIDDLGN 456
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 107/261 (40%), Gaps = 30/261 (11%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRL-LDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
N TY+ +I +C +GN++ A RL ++ S + N Y L+ G K
Sbjct: 341 NVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDL 400
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLK--ASINPDVV----TFSVL 139
L RM NG+ HI+Y ++ L K L+ A+ +L +L INP V+ V
Sbjct: 401 LMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVK 460
Query: 140 INGFLR--AGKINNAKEI--------MCKMYKTVLVLN------NILYSTLIYNYCKM-- 181
+ L A K N + +C + L+ N+ + L ++Y +
Sbjct: 461 VESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIK 520
Query: 182 ----RNLKEALNTYA-VMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDP 236
N+ E L + ++ V D T ++V C+ A +D M +GL P
Sbjct: 521 CLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRP 580
Query: 237 STSAFDCIINSYGNSGDALKA 257
+ + + II S G G ++A
Sbjct: 581 TVAIYSSIIGSLGKQGRVVEA 601
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 1/161 (0%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
+ Y L+ +C N+ A RL MV + + + L++G K +
Sbjct: 273 VMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQ 332
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHL-LDDMLKASINPDVVTFSVLINGFLRAG 147
M GV+ +Y MI CK ++ A+ L +++ I+ +V ++ LI GF + G
Sbjct: 333 MIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKG 392
Query: 148 KINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEAL 188
++ A +++ +M +V ++I Y L+ K LK A+
Sbjct: 393 GMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAM 433
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 116/241 (48%), Gaps = 9/241 (3%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ YN ++ + A L DEM L P+ TY L+ K F S
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 86 LERMRMNGVRVGHISYTAMID---GLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
L++M + V + Y+ +I+ LC +A+ + + ++ I PD+V ++ +IN
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCD---YSKAISIFSRLKRSGITPDLVAYNSMINV 269
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+ +A A+ ++ +M + ++ N + YSTL+ Y + EAL+ +A M D
Sbjct: 270 YGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALD 329
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS---GDALKAFF 259
TCN+++ + + +KEA+ + +M ++P+ +++ I+ YG + G+A+ F
Sbjct: 330 LTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR 389
Query: 260 L 260
L
Sbjct: 390 L 390
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 103/229 (44%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ P+ + YN++I+ + EA L+ EM G+ PN V+Y LL+ ++ KF
Sbjct: 256 ITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEAL 315
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
S M+ + + MID + +++EA L + K I P+VV+++ ++ +
Sbjct: 316 SVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVY 375
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
A A + M + + N + Y+T+I Y K ++A N M G +
Sbjct: 376 GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNA 435
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
T + +++ + ++G+L A + G++ + +I +Y G
Sbjct: 436 ITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVG 484
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N +TYNT+I + E+A L+ EM S G++PN +TY +++ K K ++
Sbjct: 399 NVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLF 458
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+++R +GV + + Y MI + L+ A LL + LK PD + I +A
Sbjct: 459 QKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHE-LKL---PDNIPRETAITILAKA 514
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G+ A + + +++ V + ++ +I Y + + + + M +G+ D
Sbjct: 515 GRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPD---S 571
Query: 207 NVLVATFCRSGRLKEAE 223
NV+ G+ +E E
Sbjct: 572 NVIAMVLNAYGKQREFE 588
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 100/235 (42%), Gaps = 4/235 (1%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
++ PN ++YNT++ + EA L M ++ N VTY ++ K +
Sbjct: 360 DIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKA 419
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
++ ++ M+ G+ I+Y+ +I K L+ A L + + + D V + +I
Sbjct: 420 TNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVA 479
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+ R G + +AK ++ ++ + +NI T I K +EA + SG V D
Sbjct: 480 YERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKD 535
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
++ + R+ R + M G P ++ ++N+YG + KA
Sbjct: 536 ISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKA 590
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 105/231 (45%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ + Y+ LI+ + +A + + G+ P+ V Y +++N K F +
Sbjct: 224 DLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLI 283
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+ M GV +SY+ ++ +N EA+ + +M + + D+ T +++I+ + +
Sbjct: 284 KEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQL 343
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
+ A + + K + N + Y+T++ Y + EA++ + +M + T
Sbjct: 344 DMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 403
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
N ++ + ++ ++A + M G++P+ + II+ +G +G +A
Sbjct: 404 NTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRA 454
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+++P+ +Y LI G C KG + A LLD+M++ G P+ ++Y LLN L + ++
Sbjct: 220 DVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREA 279
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
L RM++ G + Y MI G C+ +A +LDDML +P+ V++ LI G
Sbjct: 280 YKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGG 339
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
G + K+ + +M + + + L+ +C ++EA + V+ +G
Sbjct: 340 LCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLH 399
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
T +++ C ++ + F++ + + T D I
Sbjct: 400 SDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDVGI 442
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 1/238 (0%)
Query: 21 SFNLLPNCITYNTLIDGHCS-KGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF 79
FN P N ++D S +G +++AF L HG+ PN +Y L+ +
Sbjct: 147 EFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDL 206
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
+ +M V SY +I G C+ + A+ LLDDML PD ++++ L
Sbjct: 207 SIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTL 266
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
+N R ++ A +++C+M + + Y+T+I +C+ +A M +G
Sbjct: 267 LNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGC 326
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ + L+ C G E + +++ M G P S +C++ + + G +A
Sbjct: 327 SPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 384
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 97/215 (45%)
Query: 34 LIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNG 93
LI C G++ E + LL + + GL P + Y L++G + + +S L M
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 94 VRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAK 153
Y +I GLC N+ EA + ++ PD V ++ +I GF G + +A+
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 154 EIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATF 213
++ +M K + N Y+ +I+ + K + Y M +G+ +CN ++ F
Sbjct: 339 KLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGF 398
Query: 214 CRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
C G+ EA +MS G+ P+ ++ +I +
Sbjct: 399 CSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGF 433
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ + Y T+I G C KG + A +L EM+ G++PNE Y +++G K + LV +
Sbjct: 316 PDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAF 375
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M NG +S MI G C + +EA + +M + + P+ +T++ LI GF +
Sbjct: 376 YNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCK 435
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYN 177
K+ ++ ++ L + + Y+ L+ N
Sbjct: 436 ENKVEKGLKLYKELKALGLKPSGMAYAALVRN 467
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 97/222 (43%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P Y LI G C GN +L M++ P+ Y ++ GL + K
Sbjct: 244 LDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAY 303
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ ++ G + YT MI G C+ L A L +M+K + P+ ++V+I+G
Sbjct: 304 CIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGH 363
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G+I+ + +M + + +T+I +C EA + M+ +G +
Sbjct: 364 FKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNA 423
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
T N L+ FC+ ++++ + +GL PS A+ ++
Sbjct: 424 ITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 75/178 (42%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
++N P+ Y +I G C EA+ + + G P+ V Y ++ G + G
Sbjct: 276 AWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLG 335
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
M G+R +Y MI G K + ++ML+ +++ + +I
Sbjct: 336 SARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMI 395
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
GF GK + A EI M +T + N I Y+ LI +CK +++ L Y + G
Sbjct: 396 KGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALG 453
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 106/232 (45%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY L++G C N+ EA R+ ++M+ HGLKP+ V + +L GL + K
Sbjct: 295 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 354
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M+ G SYT MI CK +E A+ DDM+ + + PD ++ LI GF
Sbjct: 355 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 414
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
K++ E++ +M + + Y+ LI + + Y M + T
Sbjct: 415 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHT 474
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
N+++ ++ + + D M + G+ P +++ +I + G + +A
Sbjct: 475 FNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 526
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +Y +I C + ++E A D+MV GL+P+ Y L+ G K V
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 424
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L+ M+ G +Y A+I + ++ E + + M++ I P + TF++++ +
Sbjct: 425 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 484
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A + + +M K + ++ Y+ LI +EA M G +
Sbjct: 485 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLID 544
Query: 206 CNVLVATFCRSGR 218
N A F R G+
Sbjct: 545 YNKFAADFHRGGQ 557
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 103/226 (45%), Gaps = 10/226 (4%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TYN+++ E +L+EM + GL E T+ + + + E M
Sbjct: 196 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELM 254
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ ++G + ++D L + +L +EA +L D LK P+++T++VL+NG+ R +
Sbjct: 255 KKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLNGWCRVRNL 313
Query: 150 NNAKEIMCKM----YKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A I M K +V +N++ L+ + K +A+ + VM G + +
Sbjct: 314 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK----SDAIKLFHVMKSKGPCPNVRS 369
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS 251
+++ FC+ ++ A + D M GL P + + C+I +G
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 415
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 106/232 (45%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY L++G C N+ EA R+ ++M+ HGLKP+ V + +L GL + K
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL 355
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M+ G SYT MI CK +E A+ DDM+ + + PD ++ LI GF
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
K++ E++ +M + + Y+ LI + + Y M + T
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHT 475
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
N+++ ++ + + D M + G+ P +++ +I + G + +A
Sbjct: 476 FNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREA 527
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +Y +I C + ++E A D+MV GL+P+ Y L+ G K V
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L+ M+ G +Y A+I + ++ E + + M++ I P + TF++++ +
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 485
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A + + +M K + ++ Y+ LI +EA M G +
Sbjct: 486 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLID 545
Query: 206 CNVLVATFCRSGR 218
N A F R G+
Sbjct: 546 YNKFAADFHRGGQ 558
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 103/226 (45%), Gaps = 10/226 (4%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TYN+++ E +L+EM + GL E T+ + + + E M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELM 255
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ ++G + ++D L + +L +EA +L D LK P+++T++VL+NG+ R +
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLNGWCRVRNL 314
Query: 150 NNAKEIMCKM----YKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A I M K +V +N++ L+ + K +A+ + VM G + +
Sbjct: 315 IEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK----SDAIKLFHVMKSKGPCPNVRS 370
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS 251
+++ FC+ ++ A + D M GL P + + C+I +G
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 16/236 (6%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
++P+ TY +I+ +C ++A+ L ++M +KP+ VTY LLN +
Sbjct: 630 KIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELD----- 684
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
M V + YT MI+ C L++ L DM + I PDVVT++VL+
Sbjct: 685 --MKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK- 741
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNY-CKMRNLKEALNTYAVMNHSGHVS 201
N + + + K V ++ Y T++ ++ CK+ +L EA + M SG
Sbjct: 742 -------NKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDP 794
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
D L+A C+ G LKEA+ D M G+ P + +I +G LKA
Sbjct: 795 DAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKA 850
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 112/257 (43%), Gaps = 37/257 (14%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ P+ I Y TLI G C +G +AF L+ EM G P+ V Y L GL+ +
Sbjct: 427 IAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAF 486
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
TL+ M GV+ ++++ +I+GL L++A + + S D + ++ GF
Sbjct: 487 ETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND----ASMVKGF 542
Query: 144 LRAG---------------------------------KINNAKEIMCKMYKTVLVLNNIL 170
AG I+ A++++ +M+K + +
Sbjct: 543 CAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSM 602
Query: 171 YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMS 230
Y LI +C++ N+++A + ++ V D FT +++ T+CR K+A + M
Sbjct: 603 YGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMK 662
Query: 231 RMGLDPSTSAFDCIINS 247
R + P + ++NS
Sbjct: 663 RRDVKPDVVTYSVLLNS 679
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 66/126 (52%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
+F++ P+ Y LID C G++ EA R+ D+M+ G+ P+ Y AL+ K
Sbjct: 754 AFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLK 813
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+RM +GV+ + YTA+I G C+N + +AV L+ +ML+ I P + S +
Sbjct: 814 EAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVH 873
Query: 141 NGFLRA 146
L+A
Sbjct: 874 YAKLKA 879
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 3/209 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ Y+ +I+GH NI +A + ++M+ + N V ++L + F
Sbjct: 324 PDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDL 383
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ R + + + Y D L K +EEA+ L +M I PDV+ ++ LI G
Sbjct: 384 FKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCL 443
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK ++A ++M +M T + ++Y+ L +EA T +M + G + T
Sbjct: 444 QGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVT 503
Query: 206 CNVLVATFCRSGRLKEAEYF---MDHMSR 231
N+++ +G L +AE F ++H SR
Sbjct: 504 HNMVIEGLIDAGELDKAEAFYESLEHKSR 532
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 104/236 (44%), Gaps = 2/236 (0%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
I Y ++ G C + IE+A ++ +M HG+ P+ Y A++ G K+ +
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
M R+ + ++++ C+ EA L + + +I+ D V ++V + + GK
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
+ A E+ +M + + I Y+TLI C +A + M+ +G D NV
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG--DALKAFFLCL 262
L +G +EA + M G+ P+ + +I ++G D +AF+ L
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 10/238 (4%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
+ YN D G +EEA L EM G+ P+ + Y L+ G K +
Sbjct: 397 VCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIE 456
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
M G + Y + GL N L +EA L M + P VT +++I G + AG+
Sbjct: 457 MDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGE 516
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
++ A+ Y+++ + ++++ +C L A + + S +FT
Sbjct: 517 LDKAE----AFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFT--- 569
Query: 209 LVATFC-RSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA--FFLCLI 263
L + C + +A+ +D M ++G++P S + +I ++ + KA FF L+
Sbjct: 570 LFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILV 627
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 4/235 (1%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TY ++ + EE +LL ++ + V Y + GL + + L+ +
Sbjct: 219 TYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPL 278
Query: 90 RMNGVRVGH----ISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
R + V I+Y ++ GLC +E+A ++ DM K I+PDV +S +I G +
Sbjct: 279 RDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRK 338
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
I A ++ KM K +N ++ S+++ YC+M N EA + + + D
Sbjct: 339 NMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVC 398
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
NV + G+++EA M+ G+ P + +I G AF L
Sbjct: 399 YNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDL 453
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 99/264 (37%), Gaps = 36/264 (13%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGL------SKHSKF 79
P+ + YN L G + G +EAF L M + G+KP VT+ ++ GL K F
Sbjct: 464 PDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAF 523
Query: 80 ----------------------GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNR-LLEE 116
G + ER + Y + LC + + +
Sbjct: 524 YESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISK 583
Query: 117 AVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIY 176
A LLD M K + P+ + LI + R + A+E + +V + Y+ +I
Sbjct: 584 AQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMIN 643
Query: 177 NYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDP 236
YC++ K+A + M D T +VL+ + +E E F + P
Sbjct: 644 TYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAF-------DVIP 696
Query: 237 STSAFDCIINSYGNSGDALKAFFL 260
+ +IN Y + D K + L
Sbjct: 697 DVVYYTIMINRYCHLNDLKKVYAL 720
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNG-----LSK 75
+F+++P+ + Y +I+ +C ++++ + L +M + P+ VTY LL LS+
Sbjct: 691 AFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSR 750
Query: 76 HSK-----------------------FGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNR 112
K G ++M +GV YTA+I CK
Sbjct: 751 EMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMG 810
Query: 113 LLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYS 172
L+EA + D M+++ + PDVV ++ LI G R G + A +++ +M + + S
Sbjct: 811 YLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLS 870
Query: 173 TLIYNYCKMRNLK 185
+ Y K + L+
Sbjct: 871 AVHYAKLKAKGLR 883
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 99/235 (42%), Gaps = 4/235 (1%)
Query: 28 CITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNE----VTYGALLNGLSKHSKFGLVS 83
C+ Y I+G C + A+ LL + + ++ + Y ++ GL +
Sbjct: 252 CVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAE 311
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
S + M +G+ Y+A+I+G KN + +AV + + MLK + V S ++ +
Sbjct: 312 SVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCY 371
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G + A ++ + +T + L+ + Y+ K+ ++EA+ + M G D
Sbjct: 372 CQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDV 431
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
L+ C G+ +A M M G P ++ + +G A +AF
Sbjct: 432 INYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAF 486
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 93.2 bits (230), Expect = 1e-19, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 114/238 (47%), Gaps = 3/238 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN Y +I +G +++ + DEM S G+ + +Y AL+N ++ ++
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRL-LEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L+RM+ + ++Y +I+ + L E + L +M I PD+VT++ L++
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
G + A+ + M +V + YS L+ + K+R L++ + M G + D
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG--DALKAFFL 260
+ NVL+ + +SG +KEA M G P+ + + ++N +G SG D ++ FL
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Score = 91.7 bits (226), Expect = 5e-19, Method: Composition-based stats.
Identities = 59/237 (24%), Positives = 114/237 (48%), Gaps = 3/237 (1%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
LP+ +YN L++ + G+I+EA + +M + G PN TY LLN + ++ V
Sbjct: 314 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 373
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
M+ + +Y +I+ + +E V L DM++ +I PD+ T+ +I
Sbjct: 374 LFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACG 433
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ G +A++I+ M +V ++ Y+ +I + + +EAL + M+ G
Sbjct: 434 KGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIE 493
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG---DALKAF 258
T + L+ +F R G +KE+E + + G+ + F+ I +Y G +A+K +
Sbjct: 494 TFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 550
Score = 83.2 bits (204), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 3/229 (1%)
Query: 26 PNCITYNTLIDGHCSKGNI--EEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
P+ +TYNT+I+ C++G + E L EM G++P+ VTY LL+ +
Sbjct: 209 PSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAE 267
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
M G+ +Y+ +++ K R LE+ LL +M PD+ +++VL+ +
Sbjct: 268 MVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAY 327
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
++G I A + +M N YS L+ + + + + M S D
Sbjct: 328 AKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDA 387
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
T N+L+ F G KE M ++P ++ II + G G
Sbjct: 388 ATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGG 436
Score = 77.0 bits (188), Expect = 1e-14, Method: Composition-based stats.
Identities = 56/236 (23%), Positives = 109/236 (46%), Gaps = 3/236 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +TYNTL+ +G +EA + M G+ P+ TY L+ K + V
Sbjct: 245 PDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDL 304
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L M G SY +++ K+ ++EA+ + M A P+ T+SVL+N F +
Sbjct: 305 LGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ 364
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+G+ ++ +++ +M + + Y+ LI + + KE + + M D T
Sbjct: 365 SGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMET 424
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG---DALKAF 258
++ + G ++A + +M+ + PS+ A+ +I ++G + +AL AF
Sbjct: 425 YEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAF 480
Score = 76.3 bits (186), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/231 (23%), Positives = 99/231 (42%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S N P+ TYN LI+ G +E L +MV ++P+ TY ++ K
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHE 439
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
L+ M N + +YT +I+ + L EEA+ + M + NP + TF L+
Sbjct: 440 DARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLL 499
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
F R G + ++ I+ ++ + + N ++ I Y + +EA+ TY M S
Sbjct: 500 YSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCD 559
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS 251
D T +++ + + + E + M + PS + ++ YG +
Sbjct: 560 PDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKT 610
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TY L++G C N+ EA R+ ++M+ GLKP+ V + +L GL + K
Sbjct: 296 PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKL 355
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M+ G SYT MI CK +E A+ DDM+ + + PD ++ LI GF
Sbjct: 356 FHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGT 415
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
K++ E++ +M + + Y+ LI + + A Y M + T
Sbjct: 416 QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHT 475
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
N+++ ++ + + + M + G+ P +++ +I G + +A
Sbjct: 476 FNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREA 527
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 101/222 (45%), Gaps = 2/222 (0%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TYN+++ E +L+EM + GL E T+ + + + E M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELM 255
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ ++G + ++D L + +L +EA +L D LK P+++T++VL+NG+ R +
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLNGWCRVRNL 314
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A I M L + + ++ ++ + R +A+ + VM G + + ++
Sbjct: 315 IEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIM 374
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS 251
+ FC+ ++ A + D M GL P + + C+I +G
Sbjct: 375 IRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +Y +I C + ++E A D+MV GL+P+ Y L+ G K V
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L+ M+ G +Y A+I + ++ E A + + M++ I P + TF++++ +
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFM 485
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A + + +M K + ++ Y+ LI +EA M G +
Sbjct: 486 ARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLID 545
Query: 206 CNVLVATFCRSGR 218
N A F R G+
Sbjct: 546 YNKFAADFHRGGQ 558
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 108/217 (49%), Gaps = 3/217 (1%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S + N T+N +I C + + EA + M+ G+ PN V++ +++G K
Sbjct: 211 SLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMR 270
Query: 81 LVSSTLERMRM---NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFS 137
L +M M N V ++Y ++I+G CK L+ A + DM+K+ ++ + T+
Sbjct: 271 FALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYG 330
Query: 138 VLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHS 197
L++ + RAG + A + +M LV+N ++Y++++Y +++ A++ MN
Sbjct: 331 ALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSK 390
Query: 198 GHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGL 234
D FT ++V CR+G +KEA F +S L
Sbjct: 391 NMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKL 427
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TYN++I+G C G ++ A R+ +MV G+ NE TYGAL++ +
Sbjct: 289 PNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRL 348
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M G+ V + Y +++ L +E A+ +L DM ++ D T ++++ G R
Sbjct: 349 CDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCR 408
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G + A E ++ + LV + + ++TL++++ + + L A M G D +
Sbjct: 409 NGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAIS 468
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDA 254
L+ + + G+L+ A D M +M + ++ I+N G A
Sbjct: 469 FGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMA 517
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 3/238 (1%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEM---VSHGLKPNEVTYGALLNGLSKHSKFG 80
+ PN +++N +IDG C G++ A +LL +M + + PN VTY +++NG K +
Sbjct: 249 VWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLD 308
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
L M +GV +Y A++D + +EA+ L D+M + + V ++ ++
Sbjct: 309 LAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIV 368
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G I A ++ M + ++ + ++ C+ +KEA+ ++ V
Sbjct: 369 YWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLV 428
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
D N L+ F R +L A+ + M GL +F +I+ Y G +A
Sbjct: 429 EDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERAL 486
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TY L+D + G+ +EA RL DEM S GL N V Y +++ L S L M
Sbjct: 328 TYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDM 387
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+++ + ++ GLC+N ++EAV + + + D+V + L++ F+R K+
Sbjct: 388 NSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKL 447
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A +I+ M L L+ I + TLI Y K L+ AL Y M S+ N +
Sbjct: 448 ACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSI 507
Query: 210 VATFCRSGRLKEAEYFMDHM 229
V + G AE ++ M
Sbjct: 508 VNGLSKRGMAGAAEAVVNAM 527
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 86/164 (52%), Gaps = 6/164 (3%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ I++ TLIDG+ +G +E A + D M+ N V Y +++NGLSK G + +
Sbjct: 465 DAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVV 524
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDV--VTFSVLINGFL 144
M + + ++Y +++ K +EEA +L M K V VTF+++IN
Sbjct: 525 NAMEIKDI----VTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLC 580
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEAL 188
+ G AKE++ M + +V ++I Y TLI ++ K R+ ++ +
Sbjct: 581 KFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVV 624
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 107/230 (46%), Gaps = 6/230 (2%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S N+ + T ++ G C G ++EA ++ L + V + L++ + K
Sbjct: 389 SKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLA 448
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
L M + G+ + IS+ +IDG K LE A+ + D M+K + ++V ++ ++
Sbjct: 449 CADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIV 508
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMN-HSGH 199
NG + G A+ ++ M + + + Y+TL+ K N++EA + + M G
Sbjct: 509 NGLSKRGMAGAAEAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGE 564
Query: 200 VSDHF-TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
S T N+++ C+ G ++A+ + M G+ P + + +I S+
Sbjct: 565 KSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSF 614
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 32/162 (19%)
Query: 100 SYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKM 159
++ +I CK L EA+ + MLK + P+VV+F+++I+G + G + A +++ KM
Sbjct: 220 TFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKM 279
Query: 160 YKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRL 219
+M+ + + T N ++ FC++GRL
Sbjct: 280 --------------------------------GMMSGNFVSPNAVTYNSVINGFCKAGRL 307
Query: 220 KEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFLC 261
AE M + G+D + + ++++YG +G + +A LC
Sbjct: 308 DLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLC 349
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSH-GLKP-NEVTYGALLNGLSKHSKFGLV 82
+ + +TYNTL++ GN+EEA +L +M G K + VT+ ++N L K +
Sbjct: 529 IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKA 588
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINP 131
L+ M GV I+Y +I K+R E+ V L D ++ + P
Sbjct: 589 KEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTP 637
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +YNTLI G C KG+ EA L+DE+ + GLKP+ +T+ LL+ KF
Sbjct: 175 PDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQI 234
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
RM V+ SY A + GL EE V L D + + PDV TF+ +I GF+
Sbjct: 235 WARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVS 294
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK++ A ++ K ++++L+ CK +L+ A + + D
Sbjct: 295 EGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAV 354
Query: 206 CNVLVATFCRSGRLKEAEYFMD 227
+V + + EAE ++
Sbjct: 355 LQEVVDALVKGSKQDEAEEIVE 376
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 1/221 (0%)
Query: 42 GNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMN-GVRVGHIS 100
G E A ++ DEM K +++ ALLN KF LV + + + S
Sbjct: 120 GMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVAS 179
Query: 101 YTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMY 160
Y +I GLC EAV L+D++ + PD +TF++L++ GK ++I +M
Sbjct: 180 YNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMV 239
Query: 161 KTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLK 220
+ + + Y+ + +E ++ + + + D FT ++ F G+L
Sbjct: 240 EKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLD 299
Query: 221 EAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFLC 261
EA + + + G P F+ ++ + +GD A+ LC
Sbjct: 300 EAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELC 340
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 4/185 (2%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ IT+N L+ +KG EE ++ MV +K + +Y A L GL+ +K +
Sbjct: 208 LKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMV 267
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
S ++++ N ++ ++TAMI G L+EA+ ++ K P F+ L+
Sbjct: 268 SLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAI 327
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+AG + +A E+ +++ L+++ + ++ K EA + +D+
Sbjct: 328 CKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVEL----AKTNDY 383
Query: 204 FTCNV 208
C +
Sbjct: 384 LQCKL 388
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TYN+LI C G ++A + DE+ G +P+ TY L+ G K +
Sbjct: 287 PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRI 346
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M+ NG I Y ++DG K R + EA L + M++ + T+++LI+G R
Sbjct: 347 YGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFR 406
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G+ + C + K ++ I +S + C+ L+ A+ M G D T
Sbjct: 407 NGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVT 466
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDP 236
+ L+ F + GR E M H+ L P
Sbjct: 467 ISSLLIGFHKQGRWDWKEKLMKHIREGNLVP 497
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TYN+++ KG + A +LD+M + + TY ++ GL K + L S+ L+R+
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
G + + Y +I+ L K L+EA L D M INPDVV+++ +I +AGK+
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIY 176
A + + M + N++ + L Y
Sbjct: 752 KEAYKYLKAMLDAGCLPNHVTDTILDY 778
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 80/148 (54%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+P+ I YN L+DG + EA +L ++MV G++ + TY L++GL ++ +
Sbjct: 355 FVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGF 414
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ ++ G V I+++ + LC+ LE AV L+++M + D+VT S L+ GF
Sbjct: 415 TLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGF 474
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILY 171
+ G+ + +++M + + LV N + +
Sbjct: 475 HKQGRWDWKEKLMKHIREGNLVPNVLRW 502
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 6/214 (2%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHG------LKPNEVTYGALLNGLSKHSKFG 80
+ +YN I G G+++ A L EM P+ TY +L++ L K
Sbjct: 247 DTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAK 306
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ ++++G + +Y +I G CK+ +++A+ + +M PD + ++ L+
Sbjct: 307 DALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLL 366
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+G L+A K+ A ++ KM + + + Y+ LI + + + + G
Sbjct: 367 DGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQF 426
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGL 234
D T +++ CR G+L+ A ++ M G
Sbjct: 427 VDAITFSIVGLQLCREGKLEGAVKLVEEMETRGF 460
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%)
Query: 100 SYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKM 159
+Y +M+ K + A +LD M + D+ T++V+I G + G+ + A ++ ++
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 160 YKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRL 219
K L+ ++Y+TLI K L EA + M +G D + N ++ ++G+L
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 220 KEAEYFMDHMSRMGLDP 236
KEA ++ M G P
Sbjct: 752 KEAYKYLKAMLDAGCLP 768
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 87/196 (44%), Gaps = 3/196 (1%)
Query: 32 NTLIDGHCSKGNIEEAFRLLDEMVSHGLKP-NEVTYGALLNGLSKHSKFGLVSSTLERMR 90
NT + + SKG++ A +L + G+ TY ++++ K F L++M
Sbjct: 598 NTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMF 657
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
N +Y +I GL K + A +LD + K D+V ++ LIN +A +++
Sbjct: 658 ENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLD 717
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL- 209
A ++ M + + + Y+T+I K LKEA M +G + +H T +L
Sbjct: 718 EATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTILD 777
Query: 210 -VATFCRSGRLKEAEY 224
+ R K+A +
Sbjct: 778 YLGKEMEKARFKKASF 793
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 96/235 (40%), Gaps = 22/235 (9%)
Query: 34 LIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL------- 86
L+D G E A +LD M G N Y ++L L K + L S L
Sbjct: 133 LLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEAS 192
Query: 87 --------ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLK-ASINPDVVTFS 137
R+ + G ++ ++ GL + + E + + + D +++
Sbjct: 193 DNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYN 252
Query: 138 VLINGFLRAGKINNAKEIMCKM------YKTVLVLNNILYSTLIYNYCKMRNLKEALNTY 191
+ I+GF G ++ A + +M Y + + Y++LI+ C K+AL +
Sbjct: 253 ICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVW 312
Query: 192 AVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
+ SGH D+ T +L+ C+S R+ +A M G P T ++C+++
Sbjct: 313 DELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLD 367
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 91.7 bits (226), Expect = 5e-19, Method: Composition-based stats.
Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 7/199 (3%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P C TY +I + G + +A L + M G+KPNEV YG+L+NG ++ G+V
Sbjct: 583 PGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAES---GMVEEA 639
Query: 86 LERMRM---NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
++ RM +GV+ HI T++I K LEEA + D M + PDV + +++
Sbjct: 640 IQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSL 699
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
G ++ A+ I + + + I ++T++Y Y M L EA+ M SG +SD
Sbjct: 700 CADLGIVSEAESIFNAL-REKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSD 758
Query: 203 HFTCNVLVATFCRSGRLKE 221
+ N ++A + G+L E
Sbjct: 759 CTSFNQVMACYAADGQLSE 777
Score = 80.1 bits (196), Expect = 1e-15, Method: Composition-based stats.
Identities = 58/207 (28%), Positives = 93/207 (44%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ + YN +I + E+A L M + G P+E TY +L L+ L
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
M +G + G +Y AMI + LL +AV L + M K + P+ V + LINGF +
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAES 633
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G + A + M + + N+I+ ++LI Y K+ L+EA Y M S D
Sbjct: 634 GMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAAS 693
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMG 233
N +++ G + EAE + + G
Sbjct: 694 NSMLSLCADLGIVSEAESIFNALREKG 720
Score = 67.8 bits (164), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/189 (22%), Positives = 88/189 (46%)
Query: 58 GLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEA 117
G + + + Y ++ K S + M+ G +Y ++ L L++EA
Sbjct: 510 GQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEA 569
Query: 118 VHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYN 177
+L +ML + P T++ +I ++R G +++A ++ M KT + N ++Y +LI
Sbjct: 570 QRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLING 629
Query: 178 YCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPS 237
+ + ++EA+ + +M G S+H L+ + + G L+EA D M P
Sbjct: 630 FAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPD 689
Query: 238 TSAFDCIIN 246
+A + +++
Sbjct: 690 VAASNSMLS 698
Score = 66.2 bits (160), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/260 (23%), Positives = 112/260 (43%), Gaps = 41/260 (15%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +T+NT+I + G++ EA LL +M G+ P+ TY L LS H+ G + + L
Sbjct: 339 DTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNIL---LSLHADAGDIEAAL 395
Query: 87 E---RMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
E ++R G+ +++ A++ LC+ +++ E ++ +M + SI D + V++ +
Sbjct: 396 EYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMY 455
Query: 144 LRAGKINNAKEIM------CKMYKTVLVL----------------------------NNI 169
+ G + AK + C + T L N++
Sbjct: 456 VNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDV 515
Query: 170 L-YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDH 228
L Y+ +I Y K + ++AL+ + M + G D T N L + EA+ +
Sbjct: 516 LEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAE 575
Query: 229 MSRMGLDPSTSAFDCIINSY 248
M G P + +I SY
Sbjct: 576 MLDSGCKPGCKTYAAMIASY 595
Score = 58.2 bits (139), Expect = 5e-09, Method: Composition-based stats.
Identities = 51/225 (22%), Positives = 94/225 (41%), Gaps = 40/225 (17%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
T+NTLID + G + +A L EM+ G+ + VT+ +++ H
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTH------------- 353
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
GH+S EA LL M + I+PD T+++L++ AG I
Sbjct: 354 -------GHLS---------------EAESLLKKMEEKGISPDTKTYNILLSLHADAGDI 391
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A E K+ K L + + + +++ C+ + + E A M+ + D + V+
Sbjct: 392 EAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVI 451
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDP--STSAFDCIINSYGNSG 252
+ + G + +A+ + R LD S++ +I+ Y G
Sbjct: 452 MQMYVNEGLVVQAKALFE---RFQLDCVLSSTTLAAVIDVYAEKG 493
Score = 52.8 bits (125), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 72/158 (45%)
Query: 100 SYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKM 159
++ +ID K L +A +L +MLK+ + D VTF+ +I+ G ++ A+ ++ KM
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 160 YKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRL 219
+ + + Y+ L+ + +++ AL Y + G D T ++ C+ +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 220 KEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
E E + M R + + I+ Y N G ++A
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQA 464
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
+ + P+ TYN +I C G+ ++ ++ EM G+KPN ++G +++G K
Sbjct: 181 YGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDE 240
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
V L M+ GV +G +Y I LCK + +EA LLD ML A + P+ VT+S LI+
Sbjct: 241 VGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIH 300
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
GF AK++ M ++ Y TLIY CK + + AL+ V
Sbjct: 301 GFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVP 360
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHM 229
LV + +++EA+ + +
Sbjct: 361 SFSIMKSLVNGLAKDSKVEEAKELIGQV 388
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 74/176 (42%)
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+E +M G+ +Y MI C++ + ++ +M + I P+ +F ++I+GF
Sbjct: 175 IEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYA 234
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
K + +++ M + + Y+ I + CK + KEA M +G + T
Sbjct: 235 EDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVT 294
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFLC 261
+ L+ FC +EA+ M G P + + +I GD A LC
Sbjct: 295 YSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLC 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF- 79
S + PN +TY+ LI G C++ + EEA +L MV+ G KP+ Y L+ L K F
Sbjct: 285 SAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFE 344
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLL 121
+S E M N V I ++++GL K+ +EEA L+
Sbjct: 345 TALSLCKESMEKNWVPSFSI-MKSLVNGLAKDSKVEEAKELI 385
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 110/234 (47%), Gaps = 9/234 (3%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N + YNTL+ +++A ++ MV G +PNE TY LLN L + + +
Sbjct: 304 NVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV 363
Query: 87 E---RMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
E R G+ Y+ ++ L K + EA L DM + + ++ ++
Sbjct: 364 EISKRYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESL 417
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
AGK A E++ K+++ +V + ++Y+T+ K++ + + + M G D
Sbjct: 418 CGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDI 477
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
FT N+L+A+F R G + EA + + R P +++ +IN G +GD +A
Sbjct: 478 FTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 102/212 (48%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
+Y ++++ C G EA +L ++ G+ + + Y + + L K + + E+M
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKM 468
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ +G +Y +I + ++EA+++ +++ ++ PD+++++ LIN + G +
Sbjct: 469 KKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDV 528
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
+ A +M + L + + YSTL+ + K ++ A + + M G + T N+L
Sbjct: 529 DEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNIL 588
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAF 241
+ ++GR EA M + GL P + +
Sbjct: 589 LDCLEKNGRTAEAVDLYSKMKQQGLTPDSITY 620
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 77/149 (51%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TYN LI G ++EA + +E+ KP+ ++Y +L+N L K+
Sbjct: 475 PDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVR 534
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M+ G+ ++Y+ +++ K +E A L ++ML P++VT+++L++ +
Sbjct: 535 FKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEK 594
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTL 174
G+ A ++ KM + L ++I Y+ L
Sbjct: 595 NGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 102/227 (44%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
Y+ L+ G++ EA RL +M S +K +Y ++L L K L ++
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
GV + Y + L K + + L + M K +PD+ T+++LI F R G+++
Sbjct: 435 EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVD 494
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLV 210
A I ++ ++ + I Y++LI K ++ EA + M G D T + L+
Sbjct: 495 EAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLM 554
Query: 211 ATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
F ++ R++ A + M G P+ ++ +++ +G +A
Sbjct: 555 ECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEA 601
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
++ + + YNT+ I L ++M G P+ TY L+ + +
Sbjct: 438 VVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAI 497
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ E + + + ISY ++I+ L KN ++EA +M + +NPDVVT+S L+ F
Sbjct: 498 NIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECF 557
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ ++ A + +M N + Y+ L+ K EA++ Y+ M G D
Sbjct: 558 GKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDS 617
Query: 204 FTCNVL 209
T VL
Sbjct: 618 ITYTVL 623
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 6/197 (3%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N+ N T N LI + +++ RL+ + LK N TY LL + +
Sbjct: 166 NVHGNISTVNILIGFFGNTEDLQMCLRLVKKW---DLKMNSFTYKCLLQAYLRSRDYSKA 222
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+R G ++ +Y ++D L K+ E+A + +DM K D T++++I
Sbjct: 223 FDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRT 279
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
R GK + A + +M L LN + Y+TL+ K + + +A+ ++ M +G +
Sbjct: 280 MGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPN 339
Query: 203 HFTCNVLVATFCRSGRL 219
+T ++L+ G+L
Sbjct: 340 EYTYSLLLNLLVAEGQL 356
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 98/240 (40%), Gaps = 14/240 (5%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
++L N TY L+ + + +AF + E+ G K + Y LL+ L+K K
Sbjct: 197 WDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK--- 253
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
E M+ R +YT MI + + +EAV L ++M+ + +VV ++ L+
Sbjct: 254 ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQ 313
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
+ ++ A ++ +M +T N YS L+ NL A ++ +S
Sbjct: 314 VLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLL-------NLLVAEGQLVRLDGVVEIS 366
Query: 202 DHFTCN----VLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ LV T + G + EA M + ++ ++ S +G ++A
Sbjct: 367 KRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEA 426
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 101/228 (44%), Gaps = 5/228 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ + Y +I+ HC EEA R +EM KP+ + +L+NGL K
Sbjct: 265 PDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEF 324
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
ER + +G + +Y A++ C ++ +E+A +D+M + P+ T+ ++++ +R
Sbjct: 325 FERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIR 384
Query: 146 AGKINNAKEIMCKMYKTVLVLNNI-LYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+ A E+ Y+T+ + Y ++ +C L A+ + M G +
Sbjct: 385 MQRSKEAYEV----YQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMH 440
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+ L+ C +L EA + + M +G+ P F + + + G
Sbjct: 441 MFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEG 488
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 3/220 (1%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
+N ++D N+ +A ++ D+M +P+ +Y LL G + V M+
Sbjct: 200 FNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMK 259
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
G ++Y +I+ CK + EEA+ ++M + + P F LING K+N
Sbjct: 260 DEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLN 319
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLV 210
+A E + + L Y+ L+ YC + +++A T M G + T ++++
Sbjct: 320 DALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIIL 379
Query: 211 ATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGN 250
R R KEA MS +P+ S ++ ++ + N
Sbjct: 380 HHLIRMQRSKEAYEVYQTMS---CEPTVSTYEIMVRMFCN 416
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 100/251 (39%), Gaps = 36/251 (14%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
YN LI+ + + L+D+M + L E T+ + ++ K +M
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLLSKE-TFALISRRYARARKVKEAIGAFHKME 189
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
G ++ + M+D L K+R + +A + D M K PD+ ++++L+ G+ + +
Sbjct: 190 EFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLL 249
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNH-------------- 196
E+ +M + + Y +I +CK + +EA+ + M
Sbjct: 250 RVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLI 309
Query: 197 ---------------------SGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLD 235
SG + T N LV +C S R+++A +D M G+
Sbjct: 310 NGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVG 369
Query: 236 PSTSAFDCIIN 246
P+ +D I++
Sbjct: 370 PNARTYDIILH 380
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 42/266 (15%)
Query: 22 FNLLP--NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF 79
F +P N +++NT+IDG+ G I++A L DEM N V++ +++ L + +
Sbjct: 132 FQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRI 187
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASI---------- 129
+ ERM V +S+TAM+DGL KN ++EA L D M + +I
Sbjct: 188 DEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGY 243
Query: 130 -----------------NPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYS 172
D +++ +I GF+R ++N A C ++ + N I ++
Sbjct: 244 AQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKA----CGLFDRMPEKNVISWT 299
Query: 173 TLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRS-GRLKEAEYFMDHMSR 231
T+I Y + + +EALN ++ M G V + V + + C L E + +S+
Sbjct: 300 TMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISK 359
Query: 232 MGLDPSTSAFDCIINSYGNSGDALKA 257
+ ++N Y SG+ + A
Sbjct: 360 SVHQKNEIVTSALLNMYSKSGELIAA 385
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 17/225 (7%)
Query: 22 FNLLP--NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF 79
F+ +P N I++N +I G+ I+EA +L M ++ ++ G ++ +
Sbjct: 225 FDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDF----ASWNTMITGFIRNREM 280
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLK-ASINPDVVTFSV 138
+RM V IS+T MI G +N+ EEA+++ ML+ S+ P+V T+
Sbjct: 281 NKACGLFDRMPEKNV----ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVS 336
Query: 139 LINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
+++ + ++I + K+V N I+ S L+ Y K L A + +G
Sbjct: 337 ILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMF----DNG 392
Query: 199 HV--SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAF 241
V D + N ++A + G KEA + M + G PS +
Sbjct: 393 LVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTY 437
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 3/208 (1%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
I YN +I + + E+A L + M+S+G+ P++ TY L+ L+ LE+
Sbjct: 506 IEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEK 565
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
MR G I Y A+I K L A + +M++ +I PDVV + VLIN F G
Sbjct: 566 MRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGN 625
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHS---GHVSDHFT 205
+ A + M + + N+++Y++LI Y K+ L EA Y + S D +T
Sbjct: 626 VQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYT 685
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMG 233
N ++ + +++AE D M + G
Sbjct: 686 SNCMINLYSERSMVRKAEAIFDSMKQRG 713
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 4/223 (1%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
+ +CI Y +I G + A + EMV + ++P+ V YG L+N + S
Sbjct: 572 VSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMS 631
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKA---SINPDVVTFSVLIN 141
+E M+ G+ + Y ++I K L+EA + +L++ + PDV T + +IN
Sbjct: 632 YVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMIN 691
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
+ + A+ I M K N ++ ++ Y K +EA M ++
Sbjct: 692 LYSERSMVRKAEAIFDSM-KQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILT 750
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCI 244
D + N ++ F GR KEA M G+ P S F +
Sbjct: 751 DPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 8/220 (3%)
Query: 45 EEAFRLLDEMVSHG-LKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTA 103
E A + + S G + N + Y +L L K K+ V S + M G++ + +Y
Sbjct: 168 ERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGT 227
Query: 104 MIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKM---- 159
+ID K L A+ L M K + PD VT +++ + +A + A+E K
Sbjct: 228 LIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE 287
Query: 160 --YKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSG 217
+ + L++ Y+T+I Y K +KEA T+ M G V T N ++ + +G
Sbjct: 288 NKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG 347
Query: 218 RLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+L E M M ++ P T ++ +I+ + + D +A
Sbjct: 348 QLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERA 386
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 93/195 (47%), Gaps = 4/195 (2%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TYNT+ID + G I+EA M+ G+ P VT+ +++ + + G V+S ++ M
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+++ +Y +I KN +E A +M + PD V++ L+ F +
Sbjct: 360 KLHCAPDTR-TYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMV 418
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV-SDHFTCNV 208
A+ ++ +M + ++ S L Y + L+++ + + + +G++ S+ ++ N
Sbjct: 419 EEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSAN- 477
Query: 209 LVATFCRSGRLKEAE 223
+ + G L EAE
Sbjct: 478 -IDAYGERGYLSEAE 491
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 35/266 (13%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ TYN LI H +IE A EM GLKP+ V+Y LL S
Sbjct: 365 PDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGL 424
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M + V + + +A+ + +LE++ A N +S I+ +
Sbjct: 425 IAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG-NMSSEGYSANIDAYGE 483
Query: 146 AGKINNAKEIM--CKMY--KTVLVLNNILYSTLIYNYC-KMRNLKEALNTYAV------- 193
G ++ A+ + C+ +TV+ N ++ + I C K L E++ +Y V
Sbjct: 484 RGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTY 543
Query: 194 ----------------------MNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSR 231
M +G+VSD ++++F + G+L AE M
Sbjct: 544 NTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVE 603
Query: 232 MGLDPSTSAFDCIINSYGNSGDALKA 257
++P + +IN++ ++G+ +A
Sbjct: 604 YNIEPDVVVYGVLINAFADTGNVQQA 629
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 7/206 (3%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TY TLID + G A L +M G++P+EVT G +L K +F ++
Sbjct: 224 TYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKW 283
Query: 90 RMNGVRV-GHI-----SYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ + H+ +Y MID K+ ++EA ML+ I P VTF+ +I+ +
Sbjct: 284 SCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIY 343
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
G++ +M K K + Y+ LI + K +++ A + M G D
Sbjct: 344 GNNGQLGEVTSLM-KTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDP 402
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHM 229
+ L+ F ++EAE + M
Sbjct: 403 VSYRTLLYAFSIRHMVEEAEGLIAEM 428
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 111/273 (40%), Gaps = 38/273 (13%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+P + YN +I+G C +G EE+ +LL EM G++P++ T + L++ F
Sbjct: 470 LIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGAL 529
Query: 84 STLERMRMNGVR----------------------------------VGH-ISYTAMIDGL 108
L++MR G +GH ++ TA IDGL
Sbjct: 530 DLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGL 589
Query: 109 CKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNN 168
KN ++ + L D+ PDV+ + VLI +A + A + +M L
Sbjct: 590 IKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTV 649
Query: 169 ILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDH 228
Y+++I +CK + L+ M D T L+ C SGR EA + +
Sbjct: 650 ATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNE 709
Query: 229 MSRMGLDPSTSAFDCIINSY---GNSGDALKAF 258
M P+ F +I G SG+AL F
Sbjct: 710 MKGKDCYPNRITFMALIQGLCKCGWSGEALVYF 742
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ I Y+ LI C EA L +EMVS GLKP TY ++++G K + S
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC 671
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ RM + I+YT++I GLC + EA+ ++M P+ +TF LI G +
Sbjct: 672 IVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCK 731
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G A +M + + ++ +Y +L+ ++ N+ + M H G
Sbjct: 732 CGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVD 791
Query: 206 CNVLVAT 212
N ++A
Sbjct: 792 RNYMLAV 798
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 6/211 (2%)
Query: 34 LIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR--- 90
L+ C G +A + LD++ G + V A ++GL K+ V LE R
Sbjct: 550 LVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEG---VDRGLELFRDIC 606
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
NG I+Y +I LCK EA L ++M+ + P V T++ +I+G+ + G+I+
Sbjct: 607 ANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEID 666
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLV 210
+ +MY+ + I Y++LI+ C EA+ + M + T L+
Sbjct: 667 RGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALI 726
Query: 211 ATFCRSGRLKEAEYFMDHMSRMGLDPSTSAF 241
C+ G EA + M ++P ++ +
Sbjct: 727 QGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 101/253 (39%), Gaps = 36/253 (14%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
Y+ LI G C ++E A L E+ G+ P+ G LL S+ S+ R
Sbjct: 321 YDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELS---------R 371
Query: 91 MNGVRVGHIS-------YTAMIDGLCKNRLLEEA-------------------VHLLDDM 124
+ V +G I Y ++ +G +N L+ EA V LL D
Sbjct: 372 ITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDH 431
Query: 125 LKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNL 184
KA I PD + S++IN ++A K++ A ++ + + L+ ++Y+ +I CK
Sbjct: 432 NKA-ILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRS 490
Query: 185 KEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCI 244
+E+L M +G FT N + A + M G +P +
Sbjct: 491 EESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFL 550
Query: 245 INSYGNSGDALKA 257
+ +G A+ A
Sbjct: 551 VKKLCENGRAVDA 563
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 4/215 (1%)
Query: 42 GNIEEAFRLLDEMVSHGL-KPNEVTYGALLNGLSKH--SKFGLVSSTLERMRMNGVRVGH 98
G ++EA + D + GL PN TY LL +SK S LV + L+ MR G
Sbjct: 155 GLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDK 214
Query: 99 ISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCK 158
+ T ++ C E A+ + +++L + ++ ++L+ F + G+++ A E++
Sbjct: 215 FTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEM 273
Query: 159 MYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGR 218
+ + + LN Y LI+ + K + +A + M G +D +VL+ C+
Sbjct: 274 LEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKD 333
Query: 219 LKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
L+ A + R G+ P ++ S+ +
Sbjct: 334 LEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESE 368
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 5/198 (2%)
Query: 25 LPNCITYNTLIDGHCSKGN---IEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
+PN TYN L++ SK N +E L EM G ++ T +L K
Sbjct: 174 VPNAYTYNCLLEA-ISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSER 232
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
S + G HIS T ++ CK +++A L++ + + I + T+ VLI+
Sbjct: 233 ALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIH 291
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
GF++ +I+ A ++ KM + + + LY LI CK ++L+ AL+ Y + SG
Sbjct: 292 GFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPP 351
Query: 202 DHFTCNVLVATFCRSGRL 219
D L+ +F L
Sbjct: 352 DRGILGKLLCSFSEESEL 369
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 108/278 (38%), Gaps = 51/278 (18%)
Query: 34 LIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNG 93
L+ C G +++AF L++ + ++ N TY L++G K S+ E+MR G
Sbjct: 254 LVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMG 313
Query: 94 VRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAK 153
+ Y +I GLCK++ LE A+ L ++ ++ I PD L+ F +++
Sbjct: 314 MNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRIT 373
Query: 154 EIMCKMY--KTVLVLNNILYSTLIYN------YCKMRNLKEALNT--------------Y 191
E++ K+V++L L+ I N Y ++NL +
Sbjct: 374 EVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNK 433
Query: 192 AVMNHSGHVSDHFTC-----------------------------NVLVATFCRSGRLKEA 222
A++ S +S C N ++ C+ GR +E+
Sbjct: 434 AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEES 493
Query: 223 EYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+ M G++PS +CI D + A L
Sbjct: 494 LKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDL 531
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S L P TYN++IDG C +G I+ + M P+ +TY +L++GL +
Sbjct: 642 SKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPS 701
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTF 136
M+ I++ A+I GLCK EA+ +M + + PD +
Sbjct: 702 EAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 97/234 (41%), Gaps = 8/234 (3%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+LP+ + + +I+ ++ A LL ++V +GL P + Y ++ G+ K +
Sbjct: 435 ILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESL 494
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L M+ GV + + L + A+ LL M P + + L+
Sbjct: 495 KLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKL 554
Query: 144 LRAGKINNAKEIMCKMYKTVL---VLNNILYST-LIYNYCKMRNLKEALNTYAVMNHSGH 199
G+ +A CK V L +++ ST I K + L + + +GH
Sbjct: 555 CENGRAVDA----CKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGH 610
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
D +VL+ C++ R EA+ + M GL P+ + ++ +I+ + G+
Sbjct: 611 CPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGE 664
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F P YN ++D G + A + ++ GL T+ L+ GL K +
Sbjct: 222 FGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEE 281
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
+ L+RMR N + +YTAMI L L+ ++ + D+M + I PDV+ + L+
Sbjct: 282 MLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVV 341
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
G + G++ E+ +M ++++ +Y LI + ++ A N + + SG+++
Sbjct: 342 GLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIA 401
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
D N ++ C ++ +A L+P I+ +Y
Sbjct: 402 DIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAY 448
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 3/244 (1%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+ T+ L+ G C G IEE +L M + KP+ Y A++ L
Sbjct: 259 LVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASL 318
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ MR + ++ ++Y ++ GLCK+ +E L +M I D + VLI GF
Sbjct: 319 RVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGF 378
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ GK+ +A + + + + + +Y+ +I C + + +A + V D
Sbjct: 379 VADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDF 438
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPS---TSAFDCIINSYGNSGDALKAFFL 260
T + ++ + RL + ++ + +G S T F + + AL F++
Sbjct: 439 ETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYI 498
Query: 261 CLIK 264
K
Sbjct: 499 LKTK 502
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 83/187 (44%), Gaps = 1/187 (0%)
Query: 42 GNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISY 101
G+ A +L + M S G P+E + L+ + + + V E+M+ G + Y
Sbjct: 172 GHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLY 231
Query: 102 TAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYK 161
++D L KN + A+ + +D + + + TF +L+ G +AG+I EI+ +M +
Sbjct: 232 NRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRE 291
Query: 162 TVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKE 221
+ + Y+ +I NL +L + M D LV C+ GR++
Sbjct: 292 NLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVER 351
Query: 222 A-EYFMD 227
E FM+
Sbjct: 352 GYELFME 358
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
YN +I G C G +EA + ++ GL+P+ TY ++ + S G M
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMI 72
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
G+ I+Y +MI GLCK L +A ++ TF+ LING+ +A ++
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKATRVK 123
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLV 210
+ + C+MY+ +V N I Y+TLI+ + ++ + AL+ + M +G S T ++
Sbjct: 124 DGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDIL 183
Query: 211 ATFCRSGRLKEAEYFMDHMSRM 232
C L++A + S M
Sbjct: 184 PQLCSRKELRKAVAMLLQKSSM 205
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 13/165 (7%)
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
MR + + + Y +I GLCK +EA ++ ++L + + PDV T++++I R
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSS 60
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
+ A+++ +M + LV + I Y+++I+ CK L +A S S T N
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV------SKSCS---TFNT 111
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
L+ +C++ R+K+ M R G+ + + +I+ + GD
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGD 156
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+C T+NTLI+G+C +++ L EM G+ N +TY L++G + F
Sbjct: 105 SCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIF 164
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTF 136
+ M NGV I++ ++ LC + L +AV +L + K+S+ + VT
Sbjct: 165 QEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML--LQKSSMVSNNVTL 212
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 110/235 (46%), Gaps = 7/235 (2%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ I +N+++ +C G EEA L+ EM G+ P VT+ L+ G ++ K +
Sbjct: 246 DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLM 305
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
++M G+ ++TAMI GL N + +A+ + M A + P+ VT ++
Sbjct: 306 QKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCL 365
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
IN E+ K + + ++ ++L+ Y K L++A + + + D +T
Sbjct: 366 KVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN----KDVYTW 421
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY---GNSGDALKAF 258
N ++ +C++G +A M L P+ ++ +I+ Y G+ G+A+ F
Sbjct: 422 NSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 40/233 (17%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P +T+N LI G+ G + A L+ +M + G+ + T+ A+++GL +
Sbjct: 280 PGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDM 339
Query: 86 LERMRMNG-------------------------------VRVGHISYT----AMIDGLCK 110
+M + G V++G I +++D K
Sbjct: 340 FRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSK 399
Query: 111 NRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNIL 170
LE+A + D + N DV T++ +I G+ +AG A E+ +M L N I
Sbjct: 400 CGKLEDARKVFDSVK----NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIIT 455
Query: 171 YSTLIYNYCKMRNLKEALNTYAVMNHSGHVS-DHFTCNVLVATFCRSGRLKEA 222
++T+I Y K + EA++ + M G V + T N+++A + ++G+ EA
Sbjct: 456 WNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEA 508
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 5/216 (2%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N T+N +I G+ G +EA L +M PN VT +LL + +V
Sbjct: 488 NTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIH 547
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+ + H A+ D K+ +E + + M D++T++ LI G++
Sbjct: 548 GCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGME----TKDIITWNSLIGGYVLH 603
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT- 205
G A + +M + N S++I + M N+ E + + + H+
Sbjct: 604 GSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEH 663
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAF 241
C+ +V + R+ RL+EA F+ M+ P +F
Sbjct: 664 CSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESF 699
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 112/273 (41%), Gaps = 42/273 (15%)
Query: 22 FNLLPNCI-------TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLS 74
FN +P + YN+L+ C A+ L+ M+ GLKP++ TY L+NG
Sbjct: 169 FNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWC 228
Query: 75 KHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVV 134
K L+ M G +I+GL LE A ++ M K PD+
Sbjct: 229 SAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQ 288
Query: 135 TFSVLINGFLRAGKINNAKEI---MCKM--------YKTVL--------------VLNNI 169
TF++LI ++G++ E+ CK+ YKT++ +LNN
Sbjct: 289 TFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNC 348
Query: 170 ----------LYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRL 219
LY+ +I C+ +A + ++ M H + +L+ R G+
Sbjct: 349 VEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKF 408
Query: 220 KEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+A ++ M+ MGL P + FD + + N G
Sbjct: 409 VDAANYLVEMTEMGLVPISRCFDMVTDGLKNGG 441
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 1/155 (0%)
Query: 99 ISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCK 158
+ Y + L ++ E +L M S++ T +I + + G ++ A E+
Sbjct: 112 MEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNG 171
Query: 159 MYKTVLVLNNI-LYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSG 217
+ KT+ + +Y++L++ C ++ A M G D T +LV +C +G
Sbjct: 172 VPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAG 231
Query: 218 RLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
++KEA+ F+D MSR G +P D +I N+G
Sbjct: 232 KMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAG 266
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TY TLI G I+EAFRLL+ V G KP Y ++ G+ ++ F S M
Sbjct: 324 TYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDM 383
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
++ YT +I + +A + L +M + + P F ++ +G GK
Sbjct: 384 KVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKH 443
Query: 150 NNAKEI 155
+ A I
Sbjct: 444 DLAMRI 449
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 8/238 (3%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLK---PNEVTYGALLNGLSKHSKFGLV 82
P+ Y TL+ G+ G + + R+L+ M + P+EVTY +++
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLK-ASINPDVVTFSVLIN 141
L M GV I+Y ++ G CK ++ A LL +M + A I PDVV+++++I+
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
G + A +M + I Y+TL+ + K A + M + V
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVK 591
Query: 202 -DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS---GDAL 255
D N+LV +CR G +++A+ + M G P+ + + + N + GDAL
Sbjct: 592 VDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDAL 649
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 107/218 (49%), Gaps = 2/218 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGL-KPNEVTYGALLNGLSKHSKFGLVSS 84
P+ T NT+I+G C G +++A ++LD+M++ P+ VT ++ GL +
Sbjct: 445 PDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALD 504
Query: 85 TLER-MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L R M N ++ G ++Y A+I GL K +EA+ + + KAS+ D T++++I+G
Sbjct: 505 VLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGL 564
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
K++ AK+ + + +Y+ + C+ L +A + + SG + +
Sbjct: 565 CVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNV 624
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAF 241
N ++A RSG +EA ++ M + G P +
Sbjct: 625 VCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTW 662
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 1/185 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDE-MVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
P+ +T NT++ G ++G EEA +L+ M + +KP V Y A++ GL K K S
Sbjct: 481 PDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMS 540
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
++ V +Y +IDGLC ++ A DD++ S D ++ + G
Sbjct: 541 VFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLC 600
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
++G +++A + + + + N + Y+T+I + +EA M +G D
Sbjct: 601 QSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAV 660
Query: 205 TCNVL 209
T +L
Sbjct: 661 TWRIL 665
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 102/246 (41%), Gaps = 37/246 (15%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S L P +YN +I G C G A++LL+E P+E TY L+ L K G
Sbjct: 335 SKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTG 394
Query: 81 LVSSTLERM-RMNGV----------------------------------RVGHISYTAMI 105
+ LE M R G R + +I
Sbjct: 395 KARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVI 454
Query: 106 DGLCKNRLLEEAVHLLDDMLKASI-NPDVVTFSVLINGFLRAGKINNAKEIMCK-MYKTV 163
+GLCK +++A+ +LDDM+ PD VT + ++ G L G+ A +++ + M +
Sbjct: 455 NGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENK 514
Query: 164 LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAE 223
+ + Y+ +I K+ EA++ + + + +D T +++ C + ++ A+
Sbjct: 515 IKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAK 574
Query: 224 YFMDHM 229
F D +
Sbjct: 575 KFWDDV 580
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 85/200 (42%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
+ L+D C +G + F + + M E YG +++ L ++ + + + M
Sbjct: 274 AFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIM 333
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ G++ SY A+I GLCK+ A LL++ + P T+ +L+ +
Sbjct: 334 KSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDT 393
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A+ ++ M + +Y+ + C M N E LN M D +T N +
Sbjct: 394 GKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTV 453
Query: 210 VATFCRSGRLKEAEYFMDHM 229
+ C+ GR+ +A +D M
Sbjct: 454 INGLCKMGRVDDAMKVLDDM 473
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 112/277 (40%), Gaps = 42/277 (15%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNE----VTYGALLNGLSKHSKFGL 81
P+ + +++I C G +EA R ++ G P+E V LL S S G+
Sbjct: 88 PDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGV 147
Query: 82 VSS-----------------------TLER----------MRMNGVRVGHISYTAMIDGL 108
+ T+ R MR G +++T +I G
Sbjct: 148 IHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGY 207
Query: 109 CKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMY-----KTV 163
C+ R LE A + D+M I P+ +T SVLI GFL+ + +++M +++ +T
Sbjct: 208 CEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETD 267
Query: 164 LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAE 223
+ ++ L+ + C+ + M+ V+ F ++ + CR R A
Sbjct: 268 TSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAA 327
Query: 224 YFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+ M GL P ++++ II+ G ++A+ L
Sbjct: 328 RIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQL 364
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 98/240 (40%), Gaps = 5/240 (2%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+P+ YN L++ C+ + +A +L+ +M + G P+ VT+ L+ G + + +
Sbjct: 157 EFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVA 216
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINP-----DVVTFS 137
+ MR+ G+R ++ + +I G K R +E L+ ++ + N F+
Sbjct: 217 HKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFA 276
Query: 138 VLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHS 197
L++ R G N+ EI M V Y +I + C+ R A +M
Sbjct: 277 NLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSK 336
Query: 198 GHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
G + N ++ C+ G A ++ S PS + ++ S D KA
Sbjct: 337 GLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKA 396
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
++ P+ ++YNTLI C K ++ EA LLDE+ + GLKP+ VT+ LL +F L
Sbjct: 174 LSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFEL 233
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
+M V + +Y A + GL +E V+L ++ + + PDV +F+ +I
Sbjct: 234 GEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIR 293
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
G + GK++ A+ ++ K + ++ L+ CK + + A+ + ++
Sbjct: 294 GSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLV 353
Query: 202 DHFTCNVLVATFCRSGRLKEAE 223
T LV + + +EAE
Sbjct: 354 GQTTLQQLVDELVKGSKREEAE 375
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 107/222 (48%), Gaps = 3/222 (1%)
Query: 34 LIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMN- 92
+I + G E A ++ +EM + K + +++ ALL+ KF +V +
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 93 GVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTF-SVLINGFLRAGKINN 151
++ +SY +I LC+ L EAV LLD++ + PD+VTF ++L++ +L+ G+
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLK-GQFEL 233
Query: 152 AKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVA 211
+EI KM + + ++ Y+ + KE +N + + SG D F+ N ++
Sbjct: 234 GEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIR 293
Query: 212 TFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
G++ EAE + + + G P + F ++ + +GD
Sbjct: 294 GSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGD 335
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 112/232 (48%), Gaps = 6/232 (2%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLD-EMVSHGLKPNEVTYGALLNGLSKHSKFG 80
F + P+ +N+++D K +I+ A +M++ G+ + TYG L+ GLS ++ G
Sbjct: 141 FGIKPSLKVFNSILD-VLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIG 199
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
L+ M+ +GV + Y ++ LCKN + A L+ +M + P+ VTF++LI
Sbjct: 200 DGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILI 255
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+ + K+ + ++ K + V + + + ++ C + EAL + G
Sbjct: 256 SAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGK 315
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
D CN LV +C G+++ A+ F M R G P+ ++ +I Y + G
Sbjct: 316 VDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVG 367
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 107/230 (46%), Gaps = 7/230 (3%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TY L+ G I + F+LL M + G+ PN V Y LL+ L K+ K G S + M
Sbjct: 184 TYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEM 243
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ +++ +I C + L +++ LL+ PDVVT + ++ G++
Sbjct: 244 K----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRV 299
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
+ A E++ ++ ++ + +TL+ YC + ++ A + M G++ + T N+L
Sbjct: 300 SEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLL 359
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY---GNSGDALK 256
+A +C G L A + M + + + F+ +I G + D LK
Sbjct: 360 IAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLK 409
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 8/240 (3%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
LPN TYN LI G+C G ++ A ++M + ++ N T+ L+ GLS +
Sbjct: 350 LPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLK 409
Query: 85 TLERMR----MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
LE M+ ++G R+ Y +I G K E+A+ L M K + P V S +
Sbjct: 410 ILEMMQDSDTVHGARID--PYNCVIYGFYKENRWEDALEFLLKMEK--LFPRAVDRSFKL 465
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G +++ K +M V + I+ LI+ Y + ++E+L M G++
Sbjct: 466 ISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYL 525
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
T N ++ FC+ ++ F++ M+ G P T +++ ++ GD KA+ L
Sbjct: 526 PRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLL 585
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 14/229 (6%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN + YNTL+ C G + A L+ EM +PN+VT+ L++ K
Sbjct: 215 PNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISAYCNEQKLIQSMVL 270
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
LE+ G ++ T +++ LC + EA+ +L+ + DVV + L+ G+
Sbjct: 271 LEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCA 330
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GK+ A+ +M + + N Y+ LI YC + L AL+T+ M + T
Sbjct: 331 LGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFAT 390
Query: 206 CNVLVATFCRSGR----LKEAEYFMDHMSRMG--LDPSTSAFDCIINSY 248
N L+ GR LK E D + G +DP ++C+I +
Sbjct: 391 FNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDP----YNCVIYGF 435
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 101/230 (43%), Gaps = 5/230 (2%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMV-SHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
TY L C + ++LLDEM S GL P++ + ++ G + V S ++
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
+ G++ + +++D L K + M+ + I+ DV T+ +L+ G +
Sbjct: 138 VSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNR 197
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
I + +++ M + + N ++Y+TL++ CK + A + + M V T N+
Sbjct: 198 IGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDV----TFNI 253
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
L++ +C +L ++ ++ +G P ++ N G +A
Sbjct: 254 LISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEAL 303
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 24/246 (9%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +T+N LI +C++ + ++ LL++ S G P+ VT ++ L +
Sbjct: 246 PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEV 305
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
LER+ G +V ++ ++ G C + A +M + P+V T+++LI G+
Sbjct: 306 LERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCD 365
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHS----GHVS 201
G +++A + M + N ++TLI + L +M S G
Sbjct: 366 VGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARI 425
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRM------------------GLDPSTSAFDC 243
D + C ++ F + R ++A F+ M ++ G+D +A+D
Sbjct: 426 DPYNC--VIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQ 483
Query: 244 IINSYG 249
+I G
Sbjct: 484 MIGEGG 489
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 8/236 (3%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S +P+ +T +++ C++G + EA +L+ + S G K + V L+ G K
Sbjct: 276 SLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMR 335
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ M G +Y +I G C +L+ A+ +DM +I + TF+ LI
Sbjct: 336 VAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLI 395
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNIL--YSTLIYNYCKMRNLKEALNTYAVMNH-- 196
G G+ ++ +I+ M + V + Y+ +IY + K ++AL M
Sbjct: 396 RGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLF 455
Query: 197 SGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
V F + + C G + + + D M G PS C+I+ Y G
Sbjct: 456 PRAVDRSFK----LISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHG 507
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 68/154 (44%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
L P + + + C KG +++ D+M+ G P+ + L++ S+H K
Sbjct: 453 KLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEES 512
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ M G ++ A+I G CK + + ++DM + PD +++ L+
Sbjct: 513 LELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEE 572
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIY 176
G I A + +M + +V + ++S+L++
Sbjct: 573 LCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMF 606
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 7/231 (3%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFR----LLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
P +TYN ++D G + ++R +LDEM S GLK +E T +L+ ++
Sbjct: 243 PTLVTYNVILDVF---GKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLRE 299
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
++ G G ++Y A++ K + EA+ +L +M + S D VT++ L+
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
++RAG A ++ M K ++ N I Y+T+I Y K EAL + M +G V
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+ T N +++ + R E + M G P+ + ++ ++ GN G
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKG 470
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 99/229 (43%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
T +T++ +G + EA E+ S G +P VTY ALL K + S L+
Sbjct: 282 FTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 341
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
M N ++Y ++ + +EA +++ M K + P+ +T++ +I+ + +AGK
Sbjct: 342 MEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGK 401
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
+ A ++ M + V N Y+ ++ K E + M +G + T N
Sbjct: 402 EDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNT 461
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
++A G K M G +P F+ +I++YG G + A
Sbjct: 462 MLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDA 510
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 121/271 (44%), Gaps = 36/271 (13%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TYN L++ KG+ ++ +M S G KP E +Y +L +K + + R+
Sbjct: 528 TYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRI 587
Query: 90 R-----------------------------------MNGVRVGHISYTAMIDGLCKNRLL 114
+ +G + + + +M+ +N +
Sbjct: 588 KEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMY 647
Query: 115 EEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTL 174
++A +L+ + + ++PD+VT++ L++ ++R G+ A+EI+ + K+ L + + Y+T+
Sbjct: 648 DQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTV 707
Query: 175 IYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGL 234
I +C+ ++EA+ + M G FT N V+ + G E E ++ M++
Sbjct: 708 IKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDC 767
Query: 235 DPSTSAFDCIINSYGNSGDALKAF-FLCLIK 264
P+ F +++ Y +G +A F+ IK
Sbjct: 768 RPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 97/222 (43%), Gaps = 1/222 (0%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSK-FGLVSSTLER 88
Y T++ + G E+A L + M G P VTY +L+ K + + + L+
Sbjct: 212 AYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDE 271
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
MR G++ + + ++ + LL EA ++ P VT++ L+ F +AG
Sbjct: 272 MRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
A ++ +M + +++ Y+ L+ Y + KEA +M G + + T
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGN 250
++ + ++G+ EA M G P+T ++ +++ G
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 95/233 (40%), Gaps = 37/233 (15%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
++PN ITY T+ID + G +EA +L M G PN TY A+L+ L K S+ +
Sbjct: 382 VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMI 441
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAV-HLLDDMLKASINPDVVTFSVLING 142
L M+ NG ++ M+ LC N+ +++ V + +M PD TF+ LI+
Sbjct: 442 KMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISA 500
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+ R G +A ++ Y M +G +
Sbjct: 501 YGRCGSEVDASKM-----------------------------------YGEMTRAGFNAC 525
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDAL 255
T N L+ R G + E + M G P+ +++ ++ Y G+ L
Sbjct: 526 VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYL 578
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 82/164 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ + +N+++ ++A +L+ + GL P+ VTY +L++ + +
Sbjct: 629 PDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI 688
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L+ + + ++ +SY +I G C+ L++EAV +L +M + I P + T++ ++G+
Sbjct: 689 LKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTA 748
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALN 189
G ++++ M K N + + ++ YC+ EA++
Sbjct: 749 MGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMD 792
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 115/270 (42%), Gaps = 43/270 (15%)
Query: 33 TLIDGHCSKGNIEEAFRLLDEMV----SHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
+L+ G G+ E A L + +V S LK + + L + S++ + + L++
Sbjct: 141 SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDK 200
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF----- 143
+ + + +YT ++ + E+A+ L + M + +P +VT++V+++ F
Sbjct: 201 IPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGR 260
Query: 144 -------------------------------LRAGKINNAKEIMCKMYKTVLVLNNILYS 172
R G + AKE ++ + Y+
Sbjct: 261 SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYN 320
Query: 173 TLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRM 232
L+ + K EAL+ M + +D T N LVA + R+G KEA ++ M++
Sbjct: 321 ALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKK 380
Query: 233 GLDPSTSAFDCIINSYGNSG---DALKAFF 259
G+ P+ + +I++YG +G +ALK F+
Sbjct: 381 GVMPNAITYTTVIDAYGKAGKEDEALKLFY 410
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 106/238 (44%), Gaps = 12/238 (5%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN T+NT++ +KG + R+ EM S G +P+ T+ L+ S +G S
Sbjct: 454 PNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLI------SAYGRCGSE 507
Query: 86 LERMRMNG--VRVGH----ISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
++ +M G R G +Y A+++ L + +++ DM P ++S++
Sbjct: 508 VDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLM 567
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
+ + + G + I ++ + + + +L TL+ K R L + + + G+
Sbjct: 568 LQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGY 627
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
D N +++ F R+ +AE ++ + GL P ++ +++ Y G+ KA
Sbjct: 628 KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 67/136 (49%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ +TYN+L+D + +G +A +L + LKP+ V+Y ++ G +
Sbjct: 662 LSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAV 721
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L M G+R +Y + G + E +++ M K P+ +TF ++++G+
Sbjct: 722 RMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGY 781
Query: 144 LRAGKINNAKEIMCKM 159
RAGK + A + + K+
Sbjct: 782 CRAGKYSEAMDFVSKI 797
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 5/224 (2%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
++ PN T+N I G C +EEA + EM HG +P ++Y ++ + +F V
Sbjct: 219 HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKV 278
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
L M NG I+YT ++ L + EEA+ + M ++ PD + ++ LI+
Sbjct: 279 YEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHT 338
Query: 143 FLRAGKINNAKEIM-CKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV- 200
RAG++ A+ + +M + + +N Y+++I YC +A+ M S
Sbjct: 339 LARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCN 398
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHM---SRMGLDPSTSAF 241
D T L+ + + G + E + M + LD ST F
Sbjct: 399 PDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTF 442
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 2/220 (0%)
Query: 42 GNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISY 101
G EEA + D + GL+ N + LL+ L K + L +++ + H ++
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAH-TF 227
Query: 102 TAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYK 161
I G CK +EEA+ + +M P V++++ +I + + + E++ +M
Sbjct: 228 NIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEA 287
Query: 162 TVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKE 221
N+I Y+T++ + + +EAL M SG D N L+ T R+GRL+E
Sbjct: 288 NGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 222 AE-YFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
AE F M +G+ +TS ++ +I Y + + KA L
Sbjct: 348 AERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIEL 387
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 108/238 (45%), Gaps = 3/238 (1%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
F L N + N L+D C + +E+A +L ++ SH + PN T+ ++G K ++
Sbjct: 183 EFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVE 241
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
T++ M+ +G R ISYT +I C+ + +L +M P+ +T++ ++
Sbjct: 242 EALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIM 301
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAV-MNHSGH 199
+ + A + +M ++ +++ Y+ LI+ + L+EA + V M G
Sbjct: 302 SSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGV 361
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGL-DPSTSAFDCIINSYGNSGDALK 256
+ T N ++A +C +A + M L +P + ++ S GD ++
Sbjct: 362 SINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVE 419
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 5/224 (2%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
++ PN T+N I G C +EEA + EM HG +P ++Y ++ + +F V
Sbjct: 219 HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKV 278
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
L M NG I+YT ++ L + EEA+ + M ++ PD + ++ LI+
Sbjct: 279 YEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHT 338
Query: 143 FLRAGKINNAKEIM-CKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV- 200
RAG++ A+ + +M + + +N Y+++I YC +A+ M S
Sbjct: 339 LARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCN 398
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHM---SRMGLDPSTSAF 241
D T L+ + + G + E + M + LD ST F
Sbjct: 399 PDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTF 442
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 2/220 (0%)
Query: 42 GNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISY 101
G EEA + D + GL+ N + LL+ L K + L +++ + H ++
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAH-TF 227
Query: 102 TAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYK 161
I G CK +EEA+ + +M P V++++ +I + + + E++ +M
Sbjct: 228 NIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEA 287
Query: 162 TVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKE 221
N+I Y+T++ + + +EAL M SG D N L+ T R+GRL+E
Sbjct: 288 NGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 222 AE-YFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
AE F M +G+ +TS ++ +I Y + + KA L
Sbjct: 348 AERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIEL 387
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 108/238 (45%), Gaps = 3/238 (1%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
F L N + N L+D C + +E+A +L ++ SH + PN T+ ++G K ++
Sbjct: 183 EFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVE 241
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
T++ M+ +G R ISYT +I C+ + +L +M P+ +T++ ++
Sbjct: 242 EALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIM 301
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAV-MNHSGH 199
+ + A + +M ++ +++ Y+ LI+ + L+EA + V M G
Sbjct: 302 SSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGV 361
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGL-DPSTSAFDCIINSYGNSGDALK 256
+ T N ++A +C +A + M L +P + ++ S GD ++
Sbjct: 362 SINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVE 419
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 21/255 (8%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P TYN ++ G +E A R ++M + G+ P++ T+ ++NG + K
Sbjct: 253 PTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKL 312
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M+ N + +SYT MI G +++ + + ++M + I P+ T+S L+ G
Sbjct: 313 FVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCD 372
Query: 146 AGKINNAKEIMCKMY-KTVLVLNNILYSTLIYNYCK---MRNLKEALNTYAVMNHSGHVS 201
AGK+ AK I+ M K + +N ++ L+ + K M E L A +N
Sbjct: 373 AGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAG 432
Query: 202 DHFTCNVLVATFCRSG----------RLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS 251
H+ VL+ C++ L E E + H + ++P SA++ II N+
Sbjct: 433 -HY--GVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEP--SAYNPIIEYLCNN 487
Query: 252 GDALKA--FFLCLIK 264
G KA F L+K
Sbjct: 488 GQTAKAEVLFRQLMK 502
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 108/225 (48%), Gaps = 1/225 (0%)
Query: 34 LIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNG 93
LI+ + G ++E+ ++ +M G++ +Y +L + + ++ + +M G
Sbjct: 191 LIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEG 250
Query: 94 VRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAK 153
V +Y M+ G + LE A+ +DM I+PD TF+ +INGF R K++ A+
Sbjct: 251 VEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAE 310
Query: 154 EIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATF 213
++ +M + + + Y+T+I Y + + + L + M SG + T + L+
Sbjct: 311 KLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGL 370
Query: 214 CRSGRLKEAEYFMDHMSRMGLDPS-TSAFDCIINSYGNSGDALKA 257
C +G++ EA+ + +M + P S F ++ S +GD A
Sbjct: 371 CDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAA 415
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
+YN+L +G A R ++MVS G++P TY +L G + E M
Sbjct: 222 SYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDM 281
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ G+ ++ MI+G C+ + ++EA L +M I P VV+++ +I G+L ++
Sbjct: 282 KTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRV 341
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALN 189
++ I +M + + N YSTL+ C + EA N
Sbjct: 342 DDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKN 381
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 113/279 (40%), Gaps = 46/279 (16%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ T+NT+I+G C ++EA +L EM + + P+ V+Y ++ G +
Sbjct: 288 PDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRI 347
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINP-DVVTFSVLINGFL 144
E MR +G+ +Y+ ++ GLC + EA ++L +M+ I P D F L+
Sbjct: 348 FEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQS 407
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCK-------MRNLKEALNTYAVMNHS 197
+AG + A E++ M + Y LI N CK ++ L + ++ H
Sbjct: 408 KAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQ 467
Query: 198 GHVS-DHFTCNVLVATFCRSGRLKEAEYFMDH---------------------------- 228
+ + N ++ C +G+ +AE
Sbjct: 468 DTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSS 527
Query: 229 ------MSRMGLDPSTSAFDCIINSY---GNSGDALKAF 258
MSR G+ ++A++ +I SY G GDA A
Sbjct: 528 YEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTAL 566
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 18/256 (7%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVT-YGALLNGLSKHSKF 79
S + PN TY+TL+ G C G + EA +L M++ + P + + + LL SK
Sbjct: 353 SSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDM 412
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASI--------NP 131
+ L+ M V Y +I+ CK A+ LLD +++ I
Sbjct: 413 AAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEM 472
Query: 132 DVVTFSVLINGFLRAGKINNA----KEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEA 187
+ ++ +I G+ A +++M + + LNN LI + K N +
Sbjct: 473 EPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNN-----LIRGHAKEGNPDSS 527
Query: 188 LNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
+M+ G + +L+ ++ G +A+ +D M G P +S F +I S
Sbjct: 528 YEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIES 587
Query: 248 YGNSGDALKAFFLCLI 263
G A + +I
Sbjct: 588 LFEDGRVQTASRVMMI 603
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 13/239 (5%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
YN +I+ C+ G +A L +++ G++ + AL N + H+K G S+ E ++
Sbjct: 477 YNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQD----ALNNLIRGHAKEGNPDSSYEILK 532
Query: 91 M---NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAG 147
+ GV +Y +I +A LD M++ PD F +I G
Sbjct: 533 IMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDG 592
Query: 148 KINNAKEIMCKMY-KTVLVLNNILYSTLIYNYCKMR-NLKEALNTYAVMNHSGHVSDHFT 205
++ A +M M K V + +N+ I MR +++EAL ++N +GH +D
Sbjct: 593 RVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTAD--- 649
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF-FLCLI 263
+ L++ G+ A +D L S++D ++++ +G L A+ LC I
Sbjct: 650 LDSLLSVLSEKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKI 708
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 94/230 (40%), Gaps = 8/230 (3%)
Query: 23 NLLPNC---ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGL-KPNEVTYGALLNGLSKHSK 78
+L+P + YN L H +K +E A + GL + + T+ ++ L + SK
Sbjct: 110 DLVPEWDHSLVYNVL---HGAK-KLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSK 165
Query: 79 FGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSV 138
L M GV + +I+ K +++E+V + M + + +++
Sbjct: 166 LNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNS 225
Query: 139 LINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
L LR G+ AK KM + Y+ +++ + L+ AL + M G
Sbjct: 226 LFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRG 285
Query: 199 HVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
D T N ++ FCR ++ EAE M + PS ++ +I Y
Sbjct: 286 ISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGY 335
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 113/257 (43%), Gaps = 44/257 (17%)
Query: 32 NTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRM 91
N LI+ +G EA + + G +P+ ++Y LL ++ ++G +SS + +
Sbjct: 53 NVLIE----RGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 92 NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINN 151
+G ++ I + A+I+ ++ +E+AV L M + +NP T++ LI G+ AGK
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 152 AKEIMCKMYKT--VLVLNNI-LYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF---- 204
+ E++ M + V V NI ++ L+ +CK + ++EA M G D
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 205 ---------------------------------TCNVLVATFCRSGRLKEAEYFMDHMSR 231
TC ++V +CR GR+++ F+ M
Sbjct: 229 IATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 232 MGLDPSTSAFDCIINSY 248
M ++ + F+ +IN +
Sbjct: 289 MRVEANLVVFNSLINGF 305
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 111/230 (48%), Gaps = 7/230 (3%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN T ++ G+C +G + + R + M ++ N V + +L+NG + +
Sbjct: 258 PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEV 317
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L M+ V+ I+Y+ +++ +E+A + +M+KA + PD +S+L G++R
Sbjct: 318 LTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVR 377
Query: 146 AGKINNAKEIMCKMYKTVLV---LNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
A + A+E++ +T++V N ++++T+I +C ++ +A+ + M G +
Sbjct: 378 AKEPKKAEELL----ETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPN 433
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
T L+ + + +AE + M G+ P S F + ++ +G
Sbjct: 434 IKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAG 483
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 115/246 (46%), Gaps = 22/246 (8%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNG-LSKHSKFGLVSS 84
PN T+N L+ C K +EEA+ ++ +M G++P+ VTY + + K S
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 85 TLERMRM------NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSV 138
+E+M M NG G + + G C+ + + + + M + + ++V F+
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIV-----VGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNS 300
Query: 139 LINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
LINGF+ + E++ M + + + I YST++ + +++A + M +G
Sbjct: 301 LINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAG 360
Query: 199 HVSDHFTCNVLVATFCRSGRLKEAEYFMDHM---SRMGLDPSTSAFDCIINSYGNSG--- 252
D ++L + R+ K+AE ++ + SR P+ F +I+ + ++G
Sbjct: 361 VKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR----PNVVIFTTVISGWCSNGSMD 416
Query: 253 DALKAF 258
DA++ F
Sbjct: 417 DAMRVF 422
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 106/243 (43%), Gaps = 9/243 (3%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHG---LKPNEVTYGALLNGLSKHSK 78
L P TYNTLI G+ G E + LLD M+ G + PN T+ L+ K K
Sbjct: 144 LGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKK 203
Query: 79 FGLVSSTLERMRMNGVRVGHISYTAMIDGLC---KNRLLEEAVHLLDDM-LKASINPDVV 134
+++M GVR ++Y + C K + +++ M +K P+
Sbjct: 204 VEEAWEVVKKMEECGVRPDTVTYNTI--ATCYVQKGETVRAESEVVEKMVMKEKAKPNGR 261
Query: 135 TFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVM 194
T +++ G+ R G++ + + +M + + N +++++LI + ++ + +M
Sbjct: 262 TCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLM 321
Query: 195 NHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDA 254
+D T + ++ + +G +++A M + G+ P A+ + Y + +
Sbjct: 322 KECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEP 381
Query: 255 LKA 257
KA
Sbjct: 382 KKA 384
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 73/137 (53%), Gaps = 1/137 (0%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N+ + ITY+T+++ S G +E+A ++ EMV G+KP+ Y L G + +
Sbjct: 325 NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKA 384
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
LE + + R + +T +I G C N +++A+ + + M K ++P++ TF L+ G
Sbjct: 385 EELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWG 443
Query: 143 FLRAGKINNAKEIMCKM 159
+L + A+E++ M
Sbjct: 444 YLEVKQPWKAEEVLQMM 460
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 86/192 (44%), Gaps = 3/192 (1%)
Query: 69 LLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKAS 128
L+N L + + + + + G R ISYT ++ + + ++ ++ ++
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 129 INPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEAL 188
D + F+ +IN F +G + +A + + KM + L Y+TLI Y + +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 189 NTYAVMNHSGHV---SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
+M G+V + T NVLV +C+ +++EA + M G+ P T ++ I
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 246 NSYGNSGDALKA 257
Y G+ ++A
Sbjct: 231 TCYVQKGETVRA 242
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 113/257 (43%), Gaps = 44/257 (17%)
Query: 32 NTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRM 91
N LI+ +G EA + + G +P+ ++Y LL ++ ++G +SS + +
Sbjct: 53 NVLIE----RGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 92 NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINN 151
+G ++ I + A+I+ ++ +E+AV L M + +NP T++ LI G+ AGK
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 152 AKEIMCKMYKT--VLVLNNI-LYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF---- 204
+ E++ M + V V NI ++ L+ +CK + ++EA M G D
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 205 ---------------------------------TCNVLVATFCRSGRLKEAEYFMDHMSR 231
TC ++V +CR GR+++ F+ M
Sbjct: 229 IATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 232 MGLDPSTSAFDCIINSY 248
M ++ + F+ +IN +
Sbjct: 289 MRVEANLVVFNSLINGF 305
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 115/255 (45%), Gaps = 32/255 (12%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNG------------- 72
PN T ++ G+C +G + + R + M ++ N V + +L+NG
Sbjct: 258 PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEV 317
Query: 73 ------LSKHSKFGLVS------STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHL 120
+S + + LV L M+ V+ I+Y+ +++ +E+A +
Sbjct: 318 TLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQV 377
Query: 121 LDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLV---LNNILYSTLIYN 177
+M+KA + PD +S+L G++RA + A+E++ +T++V N ++++T+I
Sbjct: 378 FKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELL----ETLIVESRPNVVIFTTVISG 433
Query: 178 YCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPS 237
+C ++ +A+ + M G + T L+ + + +AE + M G+ P
Sbjct: 434 WCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPE 493
Query: 238 TSAFDCIINSYGNSG 252
S F + ++ +G
Sbjct: 494 NSTFLLLAEAWRVAG 508
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 116/271 (42%), Gaps = 47/271 (17%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNG-LSKHSKFGLVSS 84
PN T+N L+ C K +EEA+ ++ +M G++P+ VTY + + K S
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 85 TLERMRM------NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSV 138
+E+M M NG G + + G C+ + + + + M + + ++V F+
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIV-----VGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNS 300
Query: 139 LINGFLRAGKINNAKEIMC-----------------KMYKTVLVL--------NNILYST 173
LINGF+ + E+ KM VL L + I YST
Sbjct: 301 LINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYST 360
Query: 174 LIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHM---S 230
++ + +++A + M +G D ++L + R+ K+AE ++ + S
Sbjct: 361 VMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES 420
Query: 231 RMGLDPSTSAFDCIINSYGNSG---DALKAF 258
R P+ F +I+ + ++G DA++ F
Sbjct: 421 R----PNVVIFTTVISGWCSNGSMDDAMRVF 447
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 73/137 (53%), Gaps = 1/137 (0%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N+ + ITY+T+++ S G +E+A ++ EMV G+KP+ Y L G + +
Sbjct: 350 NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKA 409
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
LE + + R + +T +I G C N +++A+ + + M K ++P++ TF L+ G
Sbjct: 410 EELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWG 468
Query: 143 FLRAGKINNAKEIMCKM 159
+L + A+E++ M
Sbjct: 469 YLEVKQPWKAEEVLQMM 485
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 86/192 (44%), Gaps = 3/192 (1%)
Query: 69 LLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKAS 128
L+N L + + + + + G R ISYT ++ + + ++ ++ ++
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 129 INPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEAL 188
D + F+ +IN F +G + +A + + KM + L Y+TLI Y + +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 189 NTYAVMNHSGHV---SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
+M G+V + T NVLV +C+ +++EA + M G+ P T ++ I
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIA 230
Query: 246 NSYGNSGDALKA 257
Y G+ ++A
Sbjct: 231 TCYVQKGETVRA 242
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 85/181 (46%), Gaps = 1/181 (0%)
Query: 42 GNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISY 101
GN + ++L M +K + +TY ++N S + + M GV+ +Y
Sbjct: 334 GNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAY 393
Query: 102 TAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYK 161
+ + G + + ++A LL+ ++ S P+VV F+ +I+G+ G +++A + KM K
Sbjct: 394 SILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCK 452
Query: 162 TVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKE 221
+ N + TL++ Y +++ +A +M G ++ T +L + +G E
Sbjct: 453 FGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDE 512
Query: 222 A 222
+
Sbjct: 513 S 513
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 4/242 (1%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
SF P+ +T +ID + GN++ A L D + + + VT+ L+ +
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ E M+ GV+ + Y +ID + + + +A + D++ P+ T++ L+
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 357
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+ RA ++A I +M + L L ILY+TL+ R + EA + M +
Sbjct: 358 RAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETC 417
Query: 201 -SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS---GDALK 256
D +T + L+ + SGR+ EAE + M G +P+ +I YG + D ++
Sbjct: 418 DPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVR 477
Query: 257 AF 258
F
Sbjct: 478 TF 479
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 5/235 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ T+ T+I G + A ++M S G +P+ VT A+++ + + S
Sbjct: 208 PDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSL 267
Query: 86 LERMRMNGVRVGHISYTAMID--GLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+R R R+ ++++ +I G+ N + +++ ++M + P++V ++ LI+
Sbjct: 268 YDRARTEKWRIDAVTFSTLIRIYGVSGN--YDGCLNIYEEMKALGVKPNLVIYNRLIDSM 325
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
RA + AK I + N Y+ L+ Y + R +AL Y M G
Sbjct: 326 GRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTV 385
Query: 204 FTCNVLVATFCRSGRLKEA-EYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
N L++ + + EA E F D + DP + F +I Y SG +A
Sbjct: 386 ILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA 440
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 90/187 (48%), Gaps = 3/187 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN + YN LID +A + +++++G PN TY AL+ + +++G +
Sbjct: 313 PNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGR-ARYGDDALA 371
Query: 86 LER-MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLK-ASINPDVVTFSVLINGF 143
+ R M+ G+ + I Y ++ NR ++EA + DM + +PD TFS LI +
Sbjct: 372 IYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVY 431
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+G+++ A+ + +M + + +++I Y K + + + + T+ + G D
Sbjct: 432 ACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDD 491
Query: 204 FTCNVLV 210
C L+
Sbjct: 492 RFCGCLL 498
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 93/233 (39%), Gaps = 37/233 (15%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
I YN + ++E++ +L DEM+ G+KP+ T+ +++
Sbjct: 176 ILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISC---------------- 219
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
R NGV + AV + M PD VT + +I+ + RAG
Sbjct: 220 ARQNGVP-------------------KRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGN 260
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
++ A + + ++ + +STLI Y N LN Y M G + N
Sbjct: 261 VDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNR 320
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNS--GDALKAFF 259
L+ + R+ R +A+ + G P+ S + ++ +YG + GD A +
Sbjct: 321 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIY 373
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 106/233 (45%), Gaps = 3/233 (1%)
Query: 23 NLLPNCITYNTLIDGHC--SKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
N P T+ L+ C +I R+L+ MV++GL+P++VT + L + +
Sbjct: 117 NFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVD 176
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKA-SINPDVVTFSVL 139
++ + +Y ++ LCK + L +D+M + PD+V+F++L
Sbjct: 177 EAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTIL 236
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
I+ + + A ++ K+ + LY+T++ +C + EA+ Y M G
Sbjct: 237 IDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGV 296
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
D T N L+ ++GR++EA ++ M G +P T+ + ++N G
Sbjct: 297 EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F++ P+ +++ LID C+ N+ EA L+ ++ + G KP+ Y ++ G SK
Sbjct: 224 FDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSE 283
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
++M+ GV I+Y +I GL K +EEA L M+ A PD T++ L+N
Sbjct: 284 AVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMN 343
Query: 142 GFLRAG 147
G R G
Sbjct: 344 GMCRKG 349
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 82.4 bits (202), Expect = 2e-16, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 2/227 (0%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMV--SHGLKPNEVTYGALLNGLSKHSK 78
S N+ P+ + +N LI G ++ AF +L EM +H + P+ ++ GAL+ +
Sbjct: 565 SKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQ 624
Query: 79 FGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSV 138
+ + G+R YT ++ K+ + A + DM + + PD V FS
Sbjct: 625 VERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSA 684
Query: 139 LINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
LI+ A ++ A I+ + L I YS+L+ C ++ K+AL Y +
Sbjct: 685 LIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIK 744
Query: 199 HVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
T N L+ C +L +A ++D + +GL P+T + ++
Sbjct: 745 LRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
Score = 52.8 bits (125), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/230 (19%), Positives = 91/230 (39%), Gaps = 33/230 (14%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P T+N L+ S +IE A +L + G+ + Y L++ +K K +
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+M +GV ++ A+IDG + + +A + ++ PD V F+ LI+
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
++G ++ A +++ +M ++ DH
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPID---------------------------------PDH 609
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
+ L+ C +G+++ A+ + + G+ + + +NS SGD
Sbjct: 610 ISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGD 659
Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/160 (21%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
++ P+ + ++ LID ++EAF +L + S G++ ++Y +L+ +
Sbjct: 674 DVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKA 733
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
E+++ +R + A+I LC+ L +A+ LD++ + P+ +T+S+L+
Sbjct: 734 LELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLA 793
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMR 182
R + +++ + K V N++ I + CK R
Sbjct: 794 SERKDDFEVSFKLLSQA-KGDGVSPNLIMCRCITSLCKRR 832
Score = 48.1 bits (113), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S L P T N LI C + +A LDE+ + GLKPN +TY L+ + F
Sbjct: 742 SIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFE 801
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRL 113
+ L + + +GV I I LCK R
Sbjct: 802 VSFKLLSQAKGDGVSPNLI-MCRCITSLCKRRF 833
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%)
Query: 32 NTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRM 91
N LI G C GN+E A +LLDE +PN +T+ L+ G KF LERM
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 92 NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINN 151
+ I++ +I GL K +EE + LL+ M P+ T+ ++ G L +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 152 AKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
AKE+M +M + + + Y ++ C+ +++ E M + G V
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 75/150 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +T++ LI G C+KG EEAF+LL+ M ++P+ +T+ L++GL K +
Sbjct: 235 PNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDL 294
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
LERM++ G +Y ++ GL + EA ++ M+ + P +++ ++ G
Sbjct: 295 LERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCE 354
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLI 175
+ ++ +M V +++ ++
Sbjct: 355 TKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 85/196 (43%)
Query: 42 GNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISY 101
G I A +L M G P+ ++ +LN L F + GV +
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 102 TAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYK 161
+I GLC++ LE A+ LLD+ + P+V+TFS LI GF GK A +++ +M K
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 162 TVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKE 221
+ + I ++ LI K ++E ++ M G + T ++ R E
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 222 AEYFMDHMSRMGLDPS 237
A+ M M G+ PS
Sbjct: 326 AKEMMSQMISWGMRPS 341
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 5/242 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSH-GLKPNEVTYGALLNGLSKHSKFGLVSS 84
PN T+N+++ +G E R+ EM G PN +Y L+
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
E M++ GV ++Y MI GLC N + +A L DM I +T+ L+NG+
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+AG +++ + +M + + + L+ C R+ + + ++ + + +
Sbjct: 363 KAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFY 422
Query: 205 TC----NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+LV C G++ A M G PS + I+ YG GD + L
Sbjct: 423 PSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALL 482
Query: 261 CL 262
+
Sbjct: 483 AI 484
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Query: 129 INPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNIL-YSTLIYNYCKMRNLKEA 187
I P+ TF+ ++ F R G+ + I +M + V N+ Y+ L+ YC + EA
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 188 LNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
+ M G V D N ++ C + + +A+ M G++ + ++ ++N
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 248 YGNSGD 253
Y +GD
Sbjct: 361 YCKAGD 366
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 75/146 (51%), Gaps = 9/146 (6%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF--G 80
L+ N +TY TLI G G+ + A + EMVS G+ P+ +TY LL+GL K+ K
Sbjct: 11 GLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKA 70
Query: 81 LVSSTLE-------RMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDV 133
LV+ +E + + GV+ ++YT MI G CK EEA L M + PD
Sbjct: 71 LVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDS 130
Query: 134 VTFSVLINGFLRAGKINNAKEIMCKM 159
T++ LI LR G + E++ +M
Sbjct: 131 GTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 79/192 (41%), Gaps = 28/192 (14%)
Query: 49 RLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGL 108
L EM GL N VTY L+ GL + + + M +GV ++Y ++DGL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 109 CKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNN 168
CKN LE+A L AGK+ + ++ C + + N
Sbjct: 62 CKNGKLEKA--------------------------LVAGKVEDGWDLFCSLSLKGVKPNV 95
Query: 169 ILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSG-RLKEAEYFMD 227
+ Y+T+I +CK +EA + M G + D T N L+ R G + AE +
Sbjct: 96 VTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 155
Query: 228 HMS-RMGLDPST 238
S R D ST
Sbjct: 156 MRSCRFAGDAST 167
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 118 VHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYN 177
+ L +M + + + VT++ LI G +AG + A+EI +M + + + Y+ L+
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 178 YCKMRNLKEAL---------NTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDH 228
CK L++AL + + ++ G + T +++ FC+ G +EA
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 229 MSRMGLDPSTSAFDCIINSYGNSGDALKAFFLCLIK 264
M G P + ++ +I ++ GD KA LIK
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGD--KAASAELIK 154
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 35/236 (14%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
+ + P+ TYN +I C G+ ++ ++ EM +KP ++G +++G K KF
Sbjct: 176 YGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDE 235
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
V + M GV VG +Y MI LCK + EA L+D ++ + P+ VT+S+LI+
Sbjct: 236 VRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIH 295
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
GF C NL EA+N + VM +G+
Sbjct: 296 GF-----------------------------------CSEENLDEAMNLFEVMVCNGYKP 320
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
D L+ C+ G + A PS S ++N + +A
Sbjct: 321 DSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEA 376
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TYN +I C + EA L+D ++S ++PN VTY L++G + E M
Sbjct: 254 TYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVM 313
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
NG + Y +I LCK E A+ L + ++ + P L+NG K+
Sbjct: 314 VCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKV 373
Query: 150 NNAKEIM 156
+ AKE++
Sbjct: 374 DEAKELI 380
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 95/239 (39%), Gaps = 37/239 (15%)
Query: 25 LPNCI-TYNTLIDGHCSKGNIEEAFRLLDEMVS-HGLKPNEVTYGALLNGLSKHSKFGLV 82
+P + + N L+ + +EA R+ EM +G++P+ TY ++ L +
Sbjct: 142 IPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSS 201
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
S + M ++ S+ MIDG K +E ++ M + ++ V T++++I
Sbjct: 202 YSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQC 261
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+ K AK ++ + + N++ YS LI+ +C NL EA+N + VM
Sbjct: 262 LCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVM-------- 313
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFLC 261
CN G P + + +I+ GD A LC
Sbjct: 314 --VCN-------------------------GYKPDSECYFTLIHCLCKGGDFETALILC 345
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 101/225 (44%), Gaps = 4/225 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TYN L+ G +++ L ++ + P+ T+ +++ K+ + +
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 265
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L RMR N + I++ +ID K + E+ ++++ P + TF+ +I + +
Sbjct: 266 LTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGK 325
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLI--YNYCKMRNLKEALNTYAVMNHSGHVSDH 203
A I+ A+ + KM + + I Y +I Y YC ++ A + + S V
Sbjct: 326 ARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCG--SVSRAREIFEEVGESDRVLKA 383
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
T N ++ +CR+G EA+ + S + P S + + +Y
Sbjct: 384 STLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAY 428
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 109/238 (45%), Gaps = 5/238 (2%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGAL----LNGLSKHSKFG 80
+P+ Y+ LI KG A L EM + G +P+ Y AL L+ K
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 81 LVSSTLERMR-MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
V L++M+ + + ++Y ++ ++ +++ L D+ + ++PDV TF+ +
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
++ + + G I + ++ +M + I ++ LI +Y K + ++ T+ + S
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKE 309
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
T N ++ + ++ + +AE+ M+ M PS ++C+I YG G +A
Sbjct: 310 KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRA 367
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 101/225 (44%), Gaps = 4/225 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TYN L+ G +++ L ++ + P+ T+ +++ K+ + +
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 265
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L RMR N + I++ +ID K + E+ ++++ P + TF+ +I + +
Sbjct: 266 LTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGK 325
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLI--YNYCKMRNLKEALNTYAVMNHSGHVSDH 203
A I+ A+ + KM + + I Y +I Y YC ++ A + + S V
Sbjct: 326 ARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCG--SVSRAREIFEEVGESDRVLKA 383
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
T N ++ +CR+G EA+ + S + P S + + +Y
Sbjct: 384 STLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAY 428
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 109/238 (45%), Gaps = 5/238 (2%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGAL----LNGLSKHSKFG 80
+P+ Y+ LI KG A L EM + G +P+ Y AL L+ K
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALE 189
Query: 81 LVSSTLERMR-MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
V L++M+ + + ++Y ++ ++ +++ L D+ + ++PDV TF+ +
Sbjct: 190 KVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGV 249
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
++ + + G I + ++ +M + I ++ LI +Y K + ++ T+ + S
Sbjct: 250 MDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKE 309
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
T N ++ + ++ + +AE+ M+ M PS ++C+I YG G +A
Sbjct: 310 KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRA 367
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 8/233 (3%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLN-----GLSKHSKFG 80
P+ I +N LID + K +EA L +++ P E TY L+ GL + ++
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRL-LEEAVHLLDDMLKASINPDVVTFSVL 139
LV ++ ++ +G Y A I+GL K + EEA+ + M + P T++++
Sbjct: 235 LVE--MQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLM 292
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
IN + +A K + ++ C+M N Y+ L+ + + ++A + + G
Sbjct: 293 INLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 352
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
D + N L+ ++ R+G A M MG +P ++++ ++++YG +G
Sbjct: 353 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 405
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 36/227 (15%)
Query: 31 YNTLIDGHCS-KGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
YN I+G KGN EEA + M KP TY ++N K SK + M
Sbjct: 253 YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM 312
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
R + + +YTA+++ + L E+A + + + + + PDV ++ L+ + RAG
Sbjct: 313 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 372
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A EI +++M H G D + N++
Sbjct: 373 YGAAEI-----------------------------------FSLMQHMGCEPDRASYNIM 397
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALK 256
V + R+G +AE + M R+G+ P+ + ++++Y + D K
Sbjct: 398 VDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 444
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 104/229 (45%), Gaps = 4/229 (1%)
Query: 26 PNCITYNTLID--GHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
P TYN +I+ G SK + +++L EM SH KPN TY AL+N ++
Sbjct: 284 PTTETYNLMINLYGKASKSYM--SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAE 341
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
E+++ +G+ Y A+++ + A + M PD +++++++ +
Sbjct: 342 EIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 401
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
RAG ++A+ + +M + + + L+ Y K R++ + M+ +G D
Sbjct: 402 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 461
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
F N ++ + R G+ + E + M S ++ +IN YG +G
Sbjct: 462 FVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAG 510
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN TY L++ +G E+A + +++ GL+P+ Y AL+ S+ +
Sbjct: 319 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 378
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M+ G SY M+D + L +A + ++M + I P + + +L++ + +
Sbjct: 379 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 438
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A + + I+ +M + + + + ++++ Y ++ + A M + +D T
Sbjct: 439 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 498
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFLCL 262
N+L+ + ++G L+ E + P + I +Y K + CL
Sbjct: 499 YNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRK----KLYVKCL 551
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 84/187 (44%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +YN ++D + G +A + +EM G+ P ++ LL+ SK +
Sbjct: 389 PDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAI 448
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++ M NGV +M++ + + +L +M D+ T+++LIN + +
Sbjct: 449 VKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGK 508
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AG + +E+ ++ + + + +++ I Y + + + L + M SG D T
Sbjct: 509 AGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGT 568
Query: 206 CNVLVAT 212
VL++
Sbjct: 569 AKVLLSA 575
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 126 KASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLK 185
K+S PDV+ F++LI+ + + + A+ + ++ ++ V Y+ LI YC M L
Sbjct: 170 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYC-MAGLI 228
Query: 186 EALNTYAVMNHSGHVSDHFTCNVLV------ATFCRSGRLKEAEYFMDHMSRMGLDPSTS 239
E V + HVS T V V R G +EA M R P+T
Sbjct: 229 ERAEVVLVEMQNHHVSPK-TIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 240 AFDCIINSYGNSGDALKAFFL 260
++ +IN YG + + ++ L
Sbjct: 288 TYNLMINLYGKASKSYMSWKL 308
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 8/233 (3%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLN-----GLSKHSKFG 80
P+ I +N LID + K +EA L +++ P E TY L+ GL + ++
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRL-LEEAVHLLDDMLKASINPDVVTFSVL 139
LV ++ ++ +G Y A I+GL K + EEA+ + M + P T++++
Sbjct: 213 LVE--MQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLM 270
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
IN + +A K + ++ C+M N Y+ L+ + + ++A + + G
Sbjct: 271 INLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 330
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
D + N L+ ++ R+G A M MG +P ++++ ++++YG +G
Sbjct: 331 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 383
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 36/227 (15%)
Query: 31 YNTLIDGHCS-KGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
YN I+G KGN EEA + M KP TY ++N K SK + M
Sbjct: 231 YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM 290
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
R + + +YTA+++ + L E+A + + + + + PDV ++ L+ + RAG
Sbjct: 291 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 350
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A EI +++M H G D + N++
Sbjct: 351 YGAAEI-----------------------------------FSLMQHMGCEPDRASYNIM 375
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALK 256
V + R+G +AE + M R+G+ P+ + ++++Y + D K
Sbjct: 376 VDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK 422
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 104/229 (45%), Gaps = 4/229 (1%)
Query: 26 PNCITYNTLID--GHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
P TYN +I+ G SK + +++L EM SH KPN TY AL+N ++
Sbjct: 262 PTTETYNLMINLYGKASKSYM--SWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAE 319
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
E+++ +G+ Y A+++ + A + M PD +++++++ +
Sbjct: 320 EIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 379
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
RAG ++A+ + +M + + + L+ Y K R++ + M+ +G D
Sbjct: 380 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 439
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
F N ++ + R G+ + E + M S ++ +IN YG +G
Sbjct: 440 FVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAG 488
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 101/237 (42%), Gaps = 4/237 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN TY L++ +G E+A + +++ GL+P+ Y AL+ S+ +
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 356
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M+ G SY M+D + L +A + ++M + I P + + +L++ + +
Sbjct: 357 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 416
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A + + I+ +M + + + + ++++ Y ++ + A M + +D T
Sbjct: 417 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 476
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFLCL 262
N+L+ + ++G L+ E + P + I +Y K + CL
Sbjct: 477 YNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRK----KLYVKCL 529
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 84/187 (44%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +YN ++D + G +A + +EM G+ P ++ LL+ SK +
Sbjct: 367 PDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAI 426
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++ M NGV +M++ + + +L +M D+ T+++LIN + +
Sbjct: 427 VKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGK 486
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AG + +E+ ++ + + + +++ I Y + + + L + M SG D T
Sbjct: 487 AGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGT 546
Query: 206 CNVLVAT 212
VL++
Sbjct: 547 AKVLLSA 553
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 126 KASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLK 185
K+S PDV+ F++LI+ + + + A+ + ++ ++ V Y+ LI YC M L
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYC-MAGLI 206
Query: 186 EALNTYAVMNHSGHVSDHFTCNVLV------ATFCRSGRLKEAEYFMDHMSRMGLDPSTS 239
E V + HVS T V V R G +EA M R P+T
Sbjct: 207 ERAEVVLVEMQNHHVSPK-TIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 240 AFDCIINSYGNSGDALKAFFL 260
++ +IN YG + + ++ L
Sbjct: 266 TYNLMINLYGKASKSYMSWKL 286
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 7/221 (3%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLE--- 87
YN +ID + A+ L+D M S ++ + T+ L+ ++ + GL S +
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIR---RYVRAGLASEAVHCFN 210
Query: 88 RMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAG 147
RM G I+++ +I L + R EA D LK PDV+ ++ L+ G+ RAG
Sbjct: 211 RMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS-LKDRFEPDVIVYTNLVRGWCRAG 269
Query: 148 KINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCN 207
+I+ A+++ +M + N YS +I C+ + A + +A M SG + T N
Sbjct: 270 EISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFN 329
Query: 208 VLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
L+ ++GR ++ + M ++G +P T ++ +I ++
Sbjct: 330 NLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAH 370
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 101/236 (42%), Gaps = 3/236 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ I Y L+ G C G I EA ++ EM G++PN TY +++ L + +
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M +G I++ ++ K E+ + + + M K PD +T++ LI R
Sbjct: 313 FADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR 372
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+ NA +++ M K +N ++T+ K R++ A Y+ M + + T
Sbjct: 373 DENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVT 432
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY---GNSGDALKAF 258
N+L+ F S M ++P+ + + ++ + G+ +A K F
Sbjct: 433 YNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLF 488
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
+ +P+ I ++ +I K EA D + +P+ + Y L+ G + +
Sbjct: 215 YGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISE 273
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
+ M++ G+ +Y+ +ID LC+ + A + DML + P+ +TF+ L+
Sbjct: 274 AEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMR 333
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVM 194
++AG+ ++ +M K + I Y+ LI +C+ NL+ A+ M
Sbjct: 334 VHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTM 386
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 86/209 (41%), Gaps = 34/209 (16%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ ITYN LI+ HC N+E A ++L+ M+ + N T+ + + K
Sbjct: 358 PDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRM 417
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+M ++Y ++ ++ + + + +M + P+V T+ +L+ F
Sbjct: 418 YSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCG 477
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G NNA YK L+ ++ C L +L+ Y
Sbjct: 478 MGHWNNA-------YK--------LFKEMVEEKC----LTPSLSLY-------------- 504
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGL 234
+++A R+G+LK+ E ++ M + GL
Sbjct: 505 -EMVLAQLRRAGQLKKHEELVEKMIQKGL 532
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 109/230 (47%), Gaps = 4/230 (1%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
+NT+I KGN++ A + M+ G++PN T G L+ K+ M
Sbjct: 212 VFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHM 271
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
R G+ V +Y++MI + RL ++A ++D M + + + + V++N + + GK+
Sbjct: 272 RKFGI-VCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKM 330
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A+ I+ M N I Y+TLI Y K+ ++ A + + + G D + +
Sbjct: 331 ELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSM 390
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN---SYGNSGDALK 256
+ + R+ +EA+++ + R G P++ +IN YG+ A+K
Sbjct: 391 IEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIK 440
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 102/213 (47%), Gaps = 1/213 (0%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
+ PN +T+N L+D + ++ L HG+ + ++Y ++ K+ +
Sbjct: 693 YGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTN 751
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
+SS ++ M+ +G V +Y ++D K++ +E+ +L M K++ PD T++++IN
Sbjct: 752 MSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMIN 811
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
+ G I+ +++ ++ ++ L + Y+TLI Y ++EA+ M +
Sbjct: 812 IYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIP 871
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGL 234
D T LV R+ EA + M +MG+
Sbjct: 872 DKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 107/259 (41%), Gaps = 35/259 (13%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSH-GLKPNEVTYGALLNGLSKHSKFGLVSSTLE 87
I ++ ++ + G++EEA +L+ M + P+ + +L K +
Sbjct: 594 IGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYY 653
Query: 88 RMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAG 147
R+R +G+ Y +I+ + L+E ++M++ P+ VTF+VL++ + +A
Sbjct: 654 RIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAK 713
Query: 148 KINNAKEI--MCKMYKTVLVL--NNIL------------------------------YST 173
E+ + K + V V+ N I+ Y+T
Sbjct: 714 LFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNT 773
Query: 174 LIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMG 233
L+ Y K + +++ + M S DH+T N+++ + G + E + + G
Sbjct: 774 LLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESG 833
Query: 234 LDPSTSAFDCIINSYGNSG 252
L P +++ +I +YG G
Sbjct: 834 LGPDLCSYNTLIKAYGIGG 852
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 87/203 (42%), Gaps = 1/203 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN I YNTLI G+ +E A L + + GL+P+E +Y +++ G + +
Sbjct: 347 PNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHY 406
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ ++ G + + +I+ K + A+ ++DM + +++ + +
Sbjct: 407 YQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSI-LGIILQAYEK 465
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
GKI+ ++ + + LN +S+L+ Y K + + L +
Sbjct: 466 VGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHL 525
Query: 206 CNVLVATFCRSGRLKEAEYFMDH 228
++L+ + SG+L +A +H
Sbjct: 526 YHLLICSCKESGQLTDAVKIYNH 548
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 113/270 (41%), Gaps = 37/270 (13%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVS-HGLKPNEVTYGALLNGLSKHSKF 79
S L P Y +LI + +++AF L+ M S KP+ T+ L++ K +F
Sbjct: 172 SEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRF 231
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLK------------- 126
LV S + M GV ++Y +IDG K + EE +L DM++
Sbjct: 232 DLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNS 291
Query: 127 -----------------------ASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTV 163
+ PD+ TF++LI F +AG +M M K
Sbjct: 292 IIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRF 351
Query: 164 LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAE 223
L + Y+ +I + K +++ + + M + G + T LV + ++G + + +
Sbjct: 352 FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKID 411
Query: 224 YFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
+ + + T F+CIIN+YG +GD
Sbjct: 412 SVLRQIVNSDVVLDTPFFNCIINAYGQAGD 441
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 116/242 (47%), Gaps = 13/242 (5%)
Query: 22 FNLL-------PNCITYNTLID--GHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNG 72
FNLL P C TY L G+C + + +A L + M+S GLKP Y +L++
Sbjct: 131 FNLLRKQHWYEPRCKTYTKLFKVLGNCKQPD--QASLLFEVMLSEGLKPTIDVYTSLISV 188
Query: 73 LSKHSKFGLVSSTLERMR-MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINP 131
K STLE M+ ++ + ++T +I CK + ++ +M +
Sbjct: 189 YGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGC 248
Query: 132 DVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNI-LYSTLIYNYCKMRNLKEALNT 190
VT++ +I+G+ +AG + ++ M + L ++ +++I +Y RN+++ +
Sbjct: 249 STVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESW 308
Query: 191 YAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGN 250
Y+ G D T N+L+ +F ++G K+ MD M + +T ++ +I ++G
Sbjct: 309 YSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGK 368
Query: 251 SG 252
+G
Sbjct: 369 AG 370
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ T+N LI G ++ ++D M VTY ++ K + +
Sbjct: 319 PDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDV 378
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVT----FSVLIN 141
+M+ GV+ I+Y ++++ K L V +D +L+ +N DVV F+ +IN
Sbjct: 379 FRKMKYQGVKPNSITYCSLVNAYSKAGL----VVKIDSVLRQIVNSDVVLDTPFFNCIIN 434
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNY 178
+ +AG + KE+ +M + + I ++T+I Y
Sbjct: 435 AYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY 471
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/193 (18%), Positives = 82/193 (42%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
LP+ T N++I + + N+ + G++P+ T+ L+ K + + S
Sbjct: 283 LPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCS 342
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
++ M + ++Y +I+ K +E+ + M + P+ +T+ L+N +
Sbjct: 343 VMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYS 402
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
+AG + ++ ++ + +VL+ ++ +I Y + +L Y M D
Sbjct: 403 KAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKI 462
Query: 205 TCNVLVATFCRSG 217
T ++ T+ G
Sbjct: 463 TFATMIKTYTAHG 475
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
+TYN +I+ G IE+ + +M G+KPN +TY +L+N SK + S L +
Sbjct: 357 VTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQ 416
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
+ + V + + +I+ + L L M + PD +TF+ +I + G
Sbjct: 417 IVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGI 476
Query: 149 INNAKEIMCKM 159
+ +E+ +M
Sbjct: 477 FDAVQELEKQM 487
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ +TYN+LID +C IE+A++L+D+M P+ +TY ++ GL +
Sbjct: 242 LKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAR 301
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L+ M+ G +Y A I C R L +A L+D+M+K ++P+ T+++
Sbjct: 302 EVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVL 361
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
A + + E+ +M + N LI + + + A+ + M G S
Sbjct: 362 SLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYS 421
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCI 244
+VL+ C +++EAE + M G PS +F I
Sbjct: 422 LVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 39/230 (16%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
+N L+ C + ++ +A R + + H +P+ T+ LL+G + E M+
Sbjct: 183 FNALLRTLCQEKSMTDA-RNVYHSLKHQFQPDLQTFNILLSGWKSSE---EAEAFFEEMK 238
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
G++ ++Y ++ID CK+R +E+A L+D M + PDV+T++ +I G G+ +
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLV 210
A+E+ LKE M G D N +
Sbjct: 299 KAREV----------------------------LKE-------MKEYGCYPDVAAYNAAI 323
Query: 211 ATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
FC + RL +A+ +D M + GL P+ + ++ + D +++ L
Sbjct: 324 RNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWEL 373
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 46 EAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMI 105
+ F LL E + + KPN Y L+ L K + + M G V H YTA++
Sbjct: 135 QVFELLREQLWY--KPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALV 192
Query: 106 DGLCKNRLLEEAVHLLDDMLKASIN--PDVVTFSVLINGFLRAGKINNAKEIMCKMYKTV 163
++ + A LL+ M K+S N PDV T+S+LI FL+ + ++++ M +
Sbjct: 193 SAYSRSGRFDAAFTLLERM-KSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQG 251
Query: 164 LVLNNILYSTLIYNYCKMRNLKEALNTYAVM-NHSGHVSDHFTCNVLVATFCRSGRLKEA 222
+ N I Y+TLI Y K + E +T M D +T N + F +G+++
Sbjct: 252 IRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMM 311
Query: 223 EYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALK 256
E + G++P+ F+ +++SYG SG+ K
Sbjct: 312 ENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKK 345
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 96/228 (42%), Gaps = 2/228 (0%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEM-VSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
Y L+ + G + AF LL+ M SH +P+ TY L+ + F V L M
Sbjct: 188 YTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDM 247
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDML-KASINPDVVTFSVLINGFLRAGK 148
R G+R I+Y +ID K ++ E L ML + PD T + + F G+
Sbjct: 248 RRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQ 307
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
I + K + + N ++ L+ +Y K N K+ M + T NV
Sbjct: 308 IEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNV 367
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALK 256
++ F R+G LK+ EY M + PS ++ +YG + A K
Sbjct: 368 VIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADK 415
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 81/192 (42%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ T N+ + G IE ++ S G++PN T+ LL+ K + +S+
Sbjct: 290 PDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAV 349
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+E M+ ++Y +ID + L++ +L M I P VT L+ + R
Sbjct: 350 MEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGR 409
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
A K + ++ + + + L+ + ++ L+ Y +M E +M G D T
Sbjct: 410 ASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKIT 469
Query: 206 CNVLVATFCRSG 217
+V + SG
Sbjct: 470 YRTMVKAYRISG 481
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 59/127 (46%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
+TYN +ID G++++ L M S + P+ VT +L+ + SK + L
Sbjct: 363 VTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRF 422
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
+ + +R+ + + ++D + E +L+ M K PD +T+ ++ + +G
Sbjct: 423 IENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGM 482
Query: 149 INNAKEI 155
+ KE+
Sbjct: 483 TTHVKEL 489
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 88/190 (46%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN Y++L++ + KG+ ++A L+ EM S GL PN+V LL K F
Sbjct: 270 PNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSREL 329
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L + G + Y ++DGL K LEEA + DDM + D S++I+ R
Sbjct: 330 LSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCR 389
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+ + AKE+ T + ++ +T++ YC+ ++ + M+ D+ T
Sbjct: 390 SKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNT 449
Query: 206 CNVLVATFCR 215
++L+ F +
Sbjct: 450 FHILIKYFIK 459
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 101/201 (50%), Gaps = 1/201 (0%)
Query: 24 LLPNCITYNTLIDGHCS-KGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
L P+ +TYNTL+ G K +A L+ E+ +G++ + V YG +L + + +
Sbjct: 197 LKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEA 256
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ +++M++ G Y+++++ ++A L+ +M + P+ V + L+
Sbjct: 257 ENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKV 316
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+++ G + ++E++ ++ N + Y L+ K L+EA + + M G SD
Sbjct: 317 YIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSD 376
Query: 203 HFTCNVLVATFCRSGRLKEAE 223
+ +++++ CRS R KEA+
Sbjct: 377 GYANSIMISALCRSKRFKEAK 397
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 4/206 (1%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S L+PN + TL+ + G + + LL E+ S G NE+ Y L++GLSK K
Sbjct: 300 SIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLE 359
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
S + M+ GVR + + MI LC+++ +EA L D D+V + ++
Sbjct: 360 EARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTML 419
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+ RAG++ + +M KM + + + + LI + K + A T M+ GH
Sbjct: 420 CAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHR 479
Query: 201 SDHFTCNVLVATFCRSGRLK-EAEYF 225
+ C+ L+ G+++ +AE F
Sbjct: 480 LEEELCSSLIYHL---GKIRAQAEAF 502
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 1/204 (0%)
Query: 32 NTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSK-HSKFGLVSSTLERMR 90
N+++ G ++ +L D+M GLKP+ VTY LL G K + + + +
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
NG+++ + Y ++ N EEA + + M +P++ +S L+N + G
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLV 210
A E+M +M LV N ++ +TL+ Y K + + + +G+ + +L+
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLM 349
Query: 211 ATFCRSGRLKEAEYFMDHMSRMGL 234
++G+L+EA D M G+
Sbjct: 350 DGLSKAGKLEEARSIFDDMKGKGV 373
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
Query: 103 AMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK-INNAKEIMCKMYK 161
+++ L KN L+ + L D M + + PDVVT++ L+ G ++ A E++ ++
Sbjct: 171 SILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPH 230
Query: 162 TVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKE 221
+ +++++Y T++ +EA N M GH + + + L+ ++ G K+
Sbjct: 231 NGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKK 290
Query: 222 AEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
A+ M M +GL P+ ++ Y G
Sbjct: 291 ADELMTEMKSIGLVPNKVMMTTLLKVYIKGG 321
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 4/235 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLK---PNEVTYGALLNGLSKHSKFGLV 82
P TY ID C G ++EA L D M++ G P T+ ++ L+K+ K
Sbjct: 301 PENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEEC 360
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ RM G +Y +I+G+C ++EA LD+M PD+VT++ +
Sbjct: 361 FELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRV 420
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
K + A ++ +M ++ + Y+ LI + +M + A NT+ M+ V D
Sbjct: 421 LCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQD 480
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
T ++ R KEA + ++ + GL FD + G+ LKA
Sbjct: 481 VETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGN-LKA 534
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 3/191 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ T+N L G C + ++A +LL+EM+ G KP TY A ++ + +
Sbjct: 266 PDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADL 325
Query: 86 LERMRMNGVRVGHI---SYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ M G V ++ MI L KN EE L+ M+ PDV T+ +I G
Sbjct: 326 FDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEG 385
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
A K++ A + + +M + + Y+ + C+ R EAL Y M S
Sbjct: 386 MCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPS 445
Query: 203 HFTCNVLVATF 213
T N+L++ F
Sbjct: 446 VQTYNMLISMF 456
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 92/205 (44%), Gaps = 9/205 (4%)
Query: 64 VTYGALLNGLS----KHSKFGLVSSTLERMRMNGVRVGHISYT-AMIDGLCKNRLLEEAV 118
+ Y +++ LS K+ +F +V L+ M+ N V + ++ C+ L
Sbjct: 160 IAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQK 219
Query: 119 HLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNY 178
++ P++ F++L++ + G + + ++ +M V N ++ L + +
Sbjct: 220 FAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANT-FNVLFFGW 278
Query: 179 CKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMG---LD 235
C++R+ K+A+ M +GH ++FT + TFC++G + EA D M G
Sbjct: 279 CRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSA 338
Query: 236 PSTSAFDCIINSYGNSGDALKAFFL 260
P+ F +I + + A + F L
Sbjct: 339 PTAKTFALMIVALAKNDKAEECFEL 363
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 104/223 (46%), Gaps = 4/223 (1%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ ++Y+++I + G++ + +L D M ++P+ Y A+++ L+K S + +
Sbjct: 301 DVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLM 360
Query: 87 ERMRMN-GVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ M G+ ++Y ++I LCK R EEA + D+ML+ + P + T+ + LR
Sbjct: 361 KTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR-ILR 419
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G+ E++ KM K Y LI C+ R+ L + M D +
Sbjct: 420 TGE--EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSS 477
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
V++ +G+++EA + M G+ P+ + D I + +
Sbjct: 478 YIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWF 520
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN +TYN+LI C EEA ++ DEM+ GL P TY A + L + V
Sbjct: 371 PNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEE---VFEL 427
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L +MR G +Y +I LC+ R + + L D+M + ++ PD+ ++ V+I+G
Sbjct: 428 LAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFL 487
Query: 146 AGKINNA 152
GKI A
Sbjct: 488 NGKIEEA 494
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 11/234 (4%)
Query: 30 TYNTLIDGHCSK-GNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
++N +++G C+ G+ EA R+ EM + G+K + V+Y ++++ SK V +R
Sbjct: 268 SFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDR 327
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKAS-INPDVVTFSVLINGFLRAG 147
M+ + Y A++ L K + EA +L+ M + I P+VVT++ LI +A
Sbjct: 328 MKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR 387
Query: 148 KINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLK---EALNTYAVMNHSGHVSDHF 204
K AK++ +M L L+ T+ + MR L+ E A M G
Sbjct: 388 KTEEAKQVFDEM------LEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVE 441
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
T +L+ CR D M + P S++ +I+ +G +A+
Sbjct: 442 TYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAY 495
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
++ P+ ++Y LI + EEA + +EM+ G++P Y LL+ +
Sbjct: 316 DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 375
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ + MR + + SYT M+ +E A + P++VT+ LI G
Sbjct: 376 KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 435
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+ +A + E+ KM + + N + +T++ + +N AL Y M G D
Sbjct: 436 YAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPD 495
Query: 203 HFTCNVLVATFCRSGRLKEAE 223
NVL++ L+EA+
Sbjct: 496 QKAKNVLLSLASTQDELEEAK 516
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 112/235 (47%), Gaps = 6/235 (2%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ Y+ +I + GN E+A ++ MV G+ + VTY +L+ S + + VS
Sbjct: 250 LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVS 306
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
++M+ + ++ +SY +I + R EEA+ + ++ML A + P +++L++ F
Sbjct: 307 KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 366
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+G + AK + M + + + Y+T++ Y +++ A + + G +
Sbjct: 367 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 426
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYG---NSGDAL 255
T L+ + ++ +++ + M G+ + + I+++ G N G AL
Sbjct: 427 VTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSAL 481
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 108/233 (46%), Gaps = 10/233 (4%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +TYN+L+ S +E ++ D+M ++P+ V+Y L+ + + S
Sbjct: 288 STVTYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVF 344
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
E M GVR H +Y ++D + ++E+A + M + I PD+ +++ +++ ++ A
Sbjct: 345 EEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNA 404
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
+ A++ ++ N + Y TLI Y K ++++ + Y M SG ++
Sbjct: 405 SDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQ--- 461
Query: 207 NVLVATFCRSGRLK---EAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALK 256
+L SGR K A + M G+ P A + ++ S ++ D L+
Sbjct: 462 TILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL-SLASTQDELE 513
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 109/260 (41%), Gaps = 35/260 (13%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
I + LI + GN A R+L + G PN ++Y AL+ + K + R
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDML---KASINPDVVTFSVLINGFLR 145
M+ +G I+Y ++ + +EA + + +L K+ + PD + ++I + +
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 146 AGKINNAKEIMCKM---------------------YKTV-----------LVLNNILYST 173
AG A+++ M YK V + + + Y+
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYAL 326
Query: 174 LIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMG 233
LI Y + R +EAL+ + M +G H N+L+ F SG +++A+ M R
Sbjct: 327 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 386
Query: 234 LDPSTSAFDCIINSYGNSGD 253
+ P ++ ++++Y N+ D
Sbjct: 387 IFPDLWSYTTMLSAYVNASD 406
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 101/236 (42%), Gaps = 10/236 (4%)
Query: 26 PNCITYN----TLIDGHCSKGNIEEAFR-LLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
P+ ITY T ++G K EE F LLDE S LKP++ Y ++ K +
Sbjct: 214 PSAITYQIILKTFVEGDKFK-EAEEVFETLLDEKKSP-LKPDQKMYHMMIYMYKKAGNYE 271
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
M GV ++Y +++ + E + D M ++ I PDVV++++LI
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYK---EVSKIYDQMQRSDIQPDVVSYALLI 328
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+ RA + A + +M + + Y+ L+ + +++A + M
Sbjct: 329 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF 388
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALK 256
D ++ +++ + + ++ AE F + G +P+ + +I Y + D K
Sbjct: 389 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEK 444
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
+ P+ +Y T++ + + ++E A + + G +PN VTYG L+ G +K + +
Sbjct: 386 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 445
Query: 83 SSTLERMRMNGVRVGHISYTAMID--GLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
E+MR++G++ T ++D G CKN A+ +M + PD +VL+
Sbjct: 446 MEVYEKMRLSGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGVPPDQKAKNVLL 503
Query: 141 NGFLRAGKINNAKEI 155
+ ++ AKE+
Sbjct: 504 SLASTQDELEEAKEL 518
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 84/203 (41%), Gaps = 9/203 (4%)
Query: 62 NEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLL 121
+E+ + L+ K F L + G ISYTA+++ + A +
Sbjct: 145 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 204
Query: 122 DDMLKASINPDVVTFSVLINGFLRAGKINNAKEI---MCKMYKTVLVLNNILYSTLIYNY 178
M + P +T+ +++ F+ K A+E+ + K+ L + +Y +IY Y
Sbjct: 205 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 264
Query: 179 CKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPST 238
K N ++A ++ M G T N L+ +F S KE D M R + P
Sbjct: 265 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM-SFETS--YKEVSKIYDQMQRSDIQPDV 321
Query: 239 SAFDCIINSYGNS---GDALKAF 258
++ +I +YG + +AL F
Sbjct: 322 VSYALLIKAYGRARREEEALSVF 344
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
++ P+ ++Y LI + EEA + +EM+ G++P Y LL+ +
Sbjct: 309 DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 368
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ + MR + + SYT M+ +E A + P++VT+ LI G
Sbjct: 369 KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 428
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+ +A + E+ KM + + N + +T++ + +N AL Y M G D
Sbjct: 429 YAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPD 488
Query: 203 HFTCNVLVATFCRSGRLKEAE 223
NVL++ L+EA+
Sbjct: 489 QKAKNVLLSLASTQDELEEAK 509
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 112/235 (47%), Gaps = 6/235 (2%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ Y+ +I + GN E+A ++ MV G+ + VTY +L+ S + + VS
Sbjct: 243 LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVS 299
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
++M+ + ++ +SY +I + R EEA+ + ++ML A + P +++L++ F
Sbjct: 300 KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 359
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+G + AK + M + + + Y+T++ Y +++ A + + G +
Sbjct: 360 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 419
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYG---NSGDAL 255
T L+ + ++ +++ + M G+ + + I+++ G N G AL
Sbjct: 420 VTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSAL 474
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 108/233 (46%), Gaps = 10/233 (4%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +TYN+L+ S +E ++ D+M ++P+ V+Y L+ + + S
Sbjct: 281 STVTYNSLMSFETS---YKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVF 337
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
E M GVR H +Y ++D + ++E+A + M + I PD+ +++ +++ ++ A
Sbjct: 338 EEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNA 397
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
+ A++ ++ N + Y TLI Y K ++++ + Y M SG ++
Sbjct: 398 SDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQ--- 454
Query: 207 NVLVATFCRSGRLK---EAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALK 256
+L SGR K A + M G+ P A + ++ S ++ D L+
Sbjct: 455 TILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL-SLASTQDELE 506
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 109/260 (41%), Gaps = 35/260 (13%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
I + LI + GN A R+L + G PN ++Y AL+ + K + R
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDML---KASINPDVVTFSVLINGFLR 145
M+ +G I+Y ++ + +EA + + +L K+ + PD + ++I + +
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 146 AGKINNAKEIMCKM---------------------YKTV-----------LVLNNILYST 173
AG A+++ M YK V + + + Y+
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYAL 319
Query: 174 LIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMG 233
LI Y + R +EAL+ + M +G H N+L+ F SG +++A+ M R
Sbjct: 320 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 379
Query: 234 LDPSTSAFDCIINSYGNSGD 253
+ P ++ ++++Y N+ D
Sbjct: 380 IFPDLWSYTTMLSAYVNASD 399
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 101/236 (42%), Gaps = 10/236 (4%)
Query: 26 PNCITYN----TLIDGHCSKGNIEEAFR-LLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
P+ ITY T ++G K EE F LLDE S LKP++ Y ++ K +
Sbjct: 207 PSAITYQIILKTFVEGDKFK-EAEEVFETLLDEKKSP-LKPDQKMYHMMIYMYKKAGNYE 264
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
M GV ++Y +++ + E + D M ++ I PDVV++++LI
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYK---EVSKIYDQMQRSDIQPDVVSYALLI 321
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+ RA + A + +M + + Y+ L+ + +++A + M
Sbjct: 322 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF 381
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALK 256
D ++ +++ + + ++ AE F + G +P+ + +I Y + D K
Sbjct: 382 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEK 437
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ P+ +Y T++ + + ++E A + + G +PN VTYG L+ G +K + +
Sbjct: 380 IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMM 439
Query: 84 STLERMRMNGVRVGHISYTAMID--GLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
E+MR++G++ T ++D G CKN A+ +M + PD +VL++
Sbjct: 440 EVYEKMRLSGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGVPPDQKAKNVLLS 497
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNI 169
++ AKE+ +T ++ +
Sbjct: 498 LASTQDELEEAKELTGIRNETATIIARV 525
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 6/193 (3%)
Query: 62 NEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLL 121
+E+ + L+ K F L + G ISYTA+++ + A +
Sbjct: 138 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 197
Query: 122 DDMLKASINPDVVTFSVLINGFLRAGKINNAKEI---MCKMYKTVLVLNNILYSTLIYNY 178
M + P +T+ +++ F+ K A+E+ + K+ L + +Y +IY Y
Sbjct: 198 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 257
Query: 179 CKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPST 238
K N ++A ++ M G T N L+ +F S KE D M R + P
Sbjct: 258 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM-SFETS--YKEVSKIYDQMQRSDIQPDV 314
Query: 239 SAFDCIINSYGNS 251
++ +I +YG +
Sbjct: 315 VSYALLIKAYGRA 327
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
+ ++ L+ + +E F + + G + +T L++ SK LV E
Sbjct: 165 LVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYEC 224
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
+ I+ MI LCK L+E V LLD + P V+ + L+ L +
Sbjct: 225 AIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMR 284
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
I + ++ ++ +V++ I YS ++Y K +L A + M G ++ F V
Sbjct: 285 IEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTV 344
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFLC 261
V C G +KEAE + M G+ P F+C+I + G K C
Sbjct: 345 FVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYC 397
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 110/222 (49%), Gaps = 2/222 (0%)
Query: 27 NCITYNTLIDGHCSKGNIEE-AFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
+ IT NTLI + SK I++ +R+ + + + PNE+T ++ L K + V
Sbjct: 198 SVITLNTLIH-YSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDL 256
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L+R+ I T+++ + + +EE++ LL +L ++ D + +S+++ +
Sbjct: 257 LDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAK 316
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G + +A+++ +M + N+ +Y+ + C+ ++KEA + M SG T
Sbjct: 317 EGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDET 376
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
N L+ F R G ++ + + M GL PS SAF+ ++ S
Sbjct: 377 FNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKS 418
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/235 (19%), Positives = 97/235 (41%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N++ + I Y+ ++ +G++ A ++ DEM+ G N Y + +
Sbjct: 299 NMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEA 358
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
L M +GV ++ +I G + E+ + + M+ + P F+ ++
Sbjct: 359 ERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKS 418
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+ +N A EI+ K V + YS LI + + ++ +AL + M +
Sbjct: 419 VSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPG 478
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
L+ C G+++ E ++ M + ++P+ +D +I ++ GD A
Sbjct: 479 FEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNA 533
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 56/136 (41%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+P+C +N ++ N+ A +L + + G P+E TY L+ G + +
Sbjct: 405 LMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQAL 464
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
M + G + ++I GLC +E L M K I P+ + LI F
Sbjct: 465 KLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAF 524
Query: 144 LRAGKINNAKEIMCKM 159
+ G NA + +M
Sbjct: 525 QKIGDKTNADRVYNEM 540
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 76.3 bits (186), Expect = 2e-14, Method: Composition-based stats.
Identities = 66/278 (23%), Positives = 113/278 (40%), Gaps = 59/278 (21%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHG-LKPNEVTYGALLNGLSKHSKFGL 81
N++PN ++YN +I+ HC +GN++EA + ++++ P+ VTY L GL + + G
Sbjct: 211 NIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGD 270
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDML-KASINPDVV------ 134
+S L M G Y +I G ++AV D++ K ++ +V
Sbjct: 271 AASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFME 330
Query: 135 ----------------------------TFSVLINGFLRAGKINNAKEIMCKMYKT---- 162
T +VL+ FL+ GK + A + +M
Sbjct: 331 YWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPP 390
Query: 163 -VLVLNNILYSTLIYNYCKMRNLKEALNTYA-----------VMNHSGHVSDHFTCNVLV 210
+L +N+ ++ KM EA+NT+ VM++ G+ CN+ V
Sbjct: 391 NILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGY------CNI-V 443
Query: 211 ATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
FC G L EAE F L + +I++Y
Sbjct: 444 TRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAY 481
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 8/227 (3%)
Query: 39 CSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGH 98
S G +EA + M + G +P+ +TY L+ GL K + L++M G
Sbjct: 381 TSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDI 440
Query: 99 ISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCK 158
++T +I G CKN L++A+ +ML+ + D VLI+GF+ K A + +
Sbjct: 441 KTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLME 500
Query: 159 MYKTVLVLN-NILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSG 217
M K V Y LI K++ +EAL+ +M + + + +A F G
Sbjct: 501 MVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKF---G 557
Query: 218 RLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG---DALKAFFLC 261
L++A+ F+D +S PS +A+ +I ++ G DA F+C
Sbjct: 558 TLEDAKKFLDVLSSKD-SPSFAAYFHVIEAFYREGRLTDAKNLLFIC 603
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 105/259 (40%), Gaps = 38/259 (14%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +TYN + ++ E + ++DEM + G + TY VS
Sbjct: 262 STVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIK-------------VSRQF 308
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDV-VTFSV------- 138
++ RM V Y M+DG K + + LL L S NPD+ + F V
Sbjct: 309 QKSRMMAETVKLYEY--MMDGPFKPSI--QDCSLLLRYLSGSPNPDLDLVFRVSRKYEST 364
Query: 139 -------LINGFLRA----GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEA 187
+ +G R+ G+ + A+EI M +NI YS L++ CK + L+EA
Sbjct: 365 GKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEA 424
Query: 188 LNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
M G D T +L+ C++ L +A +M G D ++ D +I+
Sbjct: 425 RGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDG 484
Query: 248 Y--GNSGDALKAFFLCLIK 264
+ N + F + ++K
Sbjct: 485 FVIHNKFEGASIFLMEMVK 503
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 38/260 (14%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ T+N LI G C ++A ++D M P+ VTY + + K F V+
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEM 330
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
LE MR NG ++YT ++ L K++ + EA+ + + M + PD +S LI+ +
Sbjct: 331 LEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390
Query: 146 AGKINNAKEIMCKM-----YKTVLVLNNILYSTLIYNYCKM--RNLKEA----------- 187
G+ +A EI M + VLV N ++ + L ++ +M R LK
Sbjct: 391 TGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPN 450
Query: 188 LNTYA-----------------VMNH--SGHVS-DHFTCNVLVATFCRSGRLKEAEYFMD 227
+ TYA +++H VS D T +L+ C SG+++EA F +
Sbjct: 451 VETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFE 510
Query: 228 HMSRMGLDPSTSAFDCIINS 247
R G+ P S +++
Sbjct: 511 EAVRKGMVPRDSTCKMLVDE 530
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 95/198 (47%), Gaps = 1/198 (0%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S+ + + I N+L+D + +IE A + ++ +KP+ T+ L++G K KF
Sbjct: 232 SYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKARKFD 290
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ ++ M++ ++YT+ ++ CK +L++M + NP+VVT+++++
Sbjct: 291 DARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVM 350
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+ ++ ++ A + KM + V + YS+LI+ K K+A + M + G
Sbjct: 351 HSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVR 410
Query: 201 SDHFTCNVLVATFCRSGR 218
D N +++ R
Sbjct: 411 RDVLVYNTMISAALHHSR 428
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 111/241 (46%), Gaps = 19/241 (7%)
Query: 30 TYNTLID--GHCSKGNIEEAFRLLDEMVSHGLKPNEV------TYGALLNGLSKHSKFG- 80
TYN ++D G C F L+ E+V+ K E T ++ L+K K+
Sbjct: 168 TYNAMVDVLGKCRN------FDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNK 221
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
V + LE + GV+ I+ +++D L K +E A H + L +I PD TF++LI
Sbjct: 222 AVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHA-HEVFLKLFDTIKPDARTFNILI 280
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+GF +A K ++A+ +M M T + + Y++ + YCK + + M +G
Sbjct: 281 HGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCN 340
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG---DALKA 257
+ T +++ + +S ++ EA + M G P + +I+ +G DA +
Sbjct: 341 PNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEI 400
Query: 258 F 258
F
Sbjct: 401 F 401
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 88/169 (52%), Gaps = 6/169 (3%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ P+ +TYNT+I C KG++++ + +E+ +G +P+ +++ LL + F
Sbjct: 189 ITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGD 248
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ M+ + SY + + GL +N+ +A++L+D M I+PDV T++ LI +
Sbjct: 249 RIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAY 308
Query: 144 LRAGKINNAKEIM-C--KMYKTVLVLNNILYSTLIYNYCKMRNLKEALN 189
R NN +E+M C +M + L + + Y LI CK +L A+
Sbjct: 309 -RVD--NNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVE 354
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 7/208 (3%)
Query: 22 FNLLP--NC----ITYNTLIDGHCSKGNIEEAFRLLDEMVSH-GLKPNEVTYGALLNGLS 74
F+ +P NC ++N L+ + + ++EA + E+ G+ P+ VTY ++ L
Sbjct: 145 FDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALC 204
Query: 75 KHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVV 134
+ + S E + NG IS+ +++ + L E + D M +++P++
Sbjct: 205 RKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIR 264
Query: 135 TFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVM 194
+++ + G R K +A ++ M + + Y+ LI Y NL+E + Y M
Sbjct: 265 SYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEM 324
Query: 195 NHSGHVSDHFTCNVLVATFCRSGRLKEA 222
G D T +L+ C+ G L A
Sbjct: 325 KEKGLTPDTVTYCMLIPLLCKKGDLDRA 352
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 76/150 (50%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ I++NTL++ + E R+ D M S L PN +Y + + GL+++ KF +
Sbjct: 226 PDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNL 285
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++ M+ G+ +Y A+I + LEE + ++M + + PD VT+ +LI +
Sbjct: 286 IDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCK 345
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLI 175
G ++ A E+ + K L+ +Y ++
Sbjct: 346 KGDLDRAVEVSEEAIKHKLLSRPNMYKPVV 375
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 1/217 (0%)
Query: 42 GNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMN-GVRVGHIS 100
G E A +L DEM + ++ ALL+ K T + + G+ ++
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVT 195
Query: 101 YTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMY 160
Y MI LC+ +++ + + +++ K PD+++F+ L+ F R I M
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMK 255
Query: 161 KTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLK 220
L N Y++ + + + +ALN VM G D T N L+ + L+
Sbjct: 256 SKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLE 315
Query: 221 EAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
E + M GL P T + +I GD +A
Sbjct: 316 EVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRA 352
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S NL PN +YN+ + G +A L+D M + G+ P+ TY AL+ +
Sbjct: 256 SKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLE 315
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
V M+ G+ ++Y +I LCK L+ AV + ++ +K + + ++
Sbjct: 316 EVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVV 375
Query: 141 NGFLRAGKINNAKEIM 156
+ AGKI+ A +++
Sbjct: 376 ERLMGAGKIDEATQLV 391
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 116/269 (43%), Gaps = 41/269 (15%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
I +NTL+ + G EA RL M G+ PN +T+ ++ L ++ + +
Sbjct: 442 ILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQ 501
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSV---------- 138
M+ +G+ IS+T M++G+ +N EEA+ L M ++ + P+ + +V
Sbjct: 502 MQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLAS 561
Query: 139 --------------------------LINGFLRAGKINNAKEIMCKMYKTVLVLNNILYS 172
L++ + + G IN A+++ + L L+N + S
Sbjct: 562 LHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMIS 621
Query: 173 TLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEA-EYFMDHMSR 231
Y NLKEA+ Y + G D+ T +++ +G + +A E F D +S+
Sbjct: 622 A----YALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSK 677
Query: 232 MGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+ P + +++ ++G+ KA L
Sbjct: 678 RSMKPCLEHYGLMVDLLASAGETEKALRL 706
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 120/303 (39%), Gaps = 64/303 (21%)
Query: 22 FNLLP--NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLN-----GLS 74
F+ +P N + +N L+ G+ G EEA RL +M G++P VT L+ G
Sbjct: 231 FDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGV 290
Query: 75 KHSKFGLVSSTLERMRMNGV----------RVGHISYTAM----------------IDGL 108
+ K + + M ++ + +VG I Y M I G
Sbjct: 291 EEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGY 350
Query: 109 CKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMC----------- 157
+ L+E+A+++ M + D VT + L++ R + KE+ C
Sbjct: 351 VQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDI 410
Query: 158 --------------------KMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHS 197
K++ + + + IL++TL+ Y + EAL + M
Sbjct: 411 VLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLE 470
Query: 198 GHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
G + T N+++ + R+G++ EA+ M G+ P+ ++ ++N +G + +A
Sbjct: 471 GVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEA 530
Query: 258 FFL 260
Sbjct: 531 ILF 533
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 107/228 (46%), Gaps = 5/228 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ IT+N+L G+ + G E+A ++ +M G+ PN V++ A+ +G SK+ F
Sbjct: 324 PDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKV 383
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+M+ GV + + ++ L LL + L+ ++ D + L++ + +
Sbjct: 384 FIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGK 443
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+G + +A EI + L ++ ++ Y +E + ++VM +G D T
Sbjct: 444 SGDLQSAIEIFWGIKNKSLA----SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAIT 499
Query: 206 CNVLVATFCRSGRLKEAEYFMDHM-SRMGLDPSTSAFDCIINSYGNSG 252
+++ SG ++E + D M SR G+ P+ C+++ G SG
Sbjct: 500 FTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSG 547
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 42/274 (15%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSK--HSKFG- 80
L P+ +T+N+L+ G+ SKG ++A +L M GLKP+ + +LL +++ H K G
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 81 ---------------LVSSTLERMRMNGVRVGHISYTAM----------------IDGLC 109
V +TL M ++ G++ Y M + GL
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMY---IKTGYLPYARMVFDMMDAKNIVAWNSLVSGLS 302
Query: 110 KNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNI 169
LL++A L+ M K I PD +T++ L +G+ GK A +++ KM K V N+
Sbjct: 303 YACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM-KEKGVAPNV 361
Query: 170 LYSTLIYNYC-KMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDH 228
+ T I++ C K N + AL + M G + T + L+ L +
Sbjct: 362 VSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGF 421
Query: 229 MSRMGLDPSTSAFDCIINSYGNSGD---ALKAFF 259
R L +++ YG SGD A++ F+
Sbjct: 422 CLRKNLICDAYVATALVDMYGKSGDLQSAIEIFW 455
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 112/236 (47%), Gaps = 7/236 (2%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N ++N+++ + G +++A LLDEM GLKP+ VT+ +LL+G + + L
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+RM++ G++ S ++++ + + L+ + +L+ + DV + LI+ +++
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G + A+ + M +V N L S L Y LK+A M G D T
Sbjct: 274 GYLPYARMVFDMMDAKNIVAWNSLVSGLSYACL----LKDAEALMIRMEKEGIKPDAITW 329
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS---YGNSGDALKAFF 259
N L + + G+ ++A + M G+ P+ ++ I + GN +ALK F
Sbjct: 330 NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFI 385
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 117/277 (42%), Gaps = 48/277 (17%)
Query: 22 FNLLP--NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSK---- 75
F +P + + +N++I G+ +KG+ + +L+ M+ G +P++ T ++L S+
Sbjct: 266 FQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNL 325
Query: 76 -HSKF------------------------------GLVSSTLERMRMNGVRVGHISYTAM 104
H KF L + + + + S+ M
Sbjct: 326 LHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAE----SWNVM 381
Query: 105 IDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVL 164
I +AV + D M+ + PDVVTF+ ++ + + K+I + ++ L
Sbjct: 382 ISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRL 441
Query: 165 VLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEY 224
+ +L S L+ Y K N KEA + +S D + V+++ + G+ +EA Y
Sbjct: 442 ETDELLLSALLDMYSKCGNEKEAFRIF----NSIPKKDVVSWTVMISAYGSHGQPREALY 497
Query: 225 FMDHMSRMGLDPSTSAFDCIINSYGNSG---DALKAF 258
D M + GL P ++++ G++G + LK F
Sbjct: 498 QFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFF 534
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 96/226 (42%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
F + P + L+ C K ++ A + G+ P+ TY L+ G ++
Sbjct: 166 EFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDAS 225
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ M V ++Y A++D LCK+ ++ + +M + PD +F++ I
Sbjct: 226 GARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFI 285
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+ + AG +++A +++ +M + LV N ++ +I CK + +A M G
Sbjct: 286 HAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGAN 345
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
D +T N ++A C + A + M R P ++ ++
Sbjct: 346 PDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLK 391
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 99/225 (44%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F ++P+ TY+ L+ G + A ++ DEM+ + + Y ALL+ L K
Sbjct: 202 FGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDG 261
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
+ M G++ S+ I C + A +LD M + + P+V TF+ +I
Sbjct: 262 GYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIK 321
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
+ K+++A ++ +M + + Y++++ +C + A + M+ + +
Sbjct: 322 TLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLP 381
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
D T N+++ R GR A + MS P+ + + +I+
Sbjct: 382 DRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIH 426
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 5/155 (3%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
++L+PN T+N +I C +++A+ LLDEM+ G P+ TY +++ H +
Sbjct: 307 YDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNR 366
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
+ L RM +Y ++ L + + A + + M + P V T++V+I+
Sbjct: 367 ATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIH 426
Query: 142 GFLR-AGKINNAKEIMCKMYKTVLVLNNILYSTLI 175
G +R GK+ A C+ ++ ++ YST +
Sbjct: 427 GLVRKKGKLEEA----CRYFEMMIDEGIPPYSTTV 457
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 80/176 (45%), Gaps = 1/176 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ ++ I +C G++ A+++LD M + L PN T+ ++ L K+ K
Sbjct: 274 LKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAY 333
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L+ M G +Y +++ C + + A LL M + PD T+++++
Sbjct: 334 LLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLL 393
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMR-NLKEALNTYAVMNHSG 198
+R G+ + A EI M + Y+ +I+ + + L+EA + +M G
Sbjct: 394 IRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEG 449
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 78/195 (40%), Gaps = 1/195 (0%)
Query: 65 TYGALLNGLSKHSKFGLVSSTL-ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDD 123
+Y L+ L +F L+ L E N + + + + L EA +
Sbjct: 104 SYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNR 163
Query: 124 MLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRN 183
M++ I P V L++ +N+A+E K +V + YS L+ + ++R+
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 184 LKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDC 243
A + M V D N L+ C+SG + M +GL P +F
Sbjct: 224 ASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAI 283
Query: 244 IINSYGNSGDALKAF 258
I++Y ++GD A+
Sbjct: 284 FIHAYCDAGDVHSAY 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 70/160 (43%)
Query: 88 RMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAG 147
RM G++ ++ LC + + A I P T+S+L+ G+ R
Sbjct: 163 RMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIR 222
Query: 148 KINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCN 207
+ A+++ +M + V++ + Y+ L+ CK ++ + M + G D ++
Sbjct: 223 DASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFA 282
Query: 208 VLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
+ + +C +G + A +D M R L P+ F+ II +
Sbjct: 283 IFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKT 322
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 79/152 (51%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
++P+ N +I + ++EA R+ EM +G +PN TY L+ G+ + + G
Sbjct: 219 VIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGL 278
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ M++ G+ Y +I L R L+EAV ++ DML S++PD++T++ ++
Sbjct: 279 GFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTEL 338
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLI 175
R G+ + A E++ + K V+ Y TL+
Sbjct: 339 CRGGRGSEALEMVEEWKKRDPVMGERNYRTLM 370
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 10/202 (4%)
Query: 31 YNTLIDGHCSKGNI-EEAFRLLDEMV-SHGLKPNEVTYGALLNGLSKH-SKFGL------ 81
YN +I C + + AF + ++M+ S KP+ TY LL+ L K +K +
Sbjct: 146 YNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLH 205
Query: 82 -VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
V S ++M+ NGV +I K ++EA+ + +M P+ T+S L+
Sbjct: 206 AVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLV 265
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G G++ +M +V N Y LI + R L EA+ M +
Sbjct: 266 KGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLS 325
Query: 201 SDHFTCNVLVATFCRSGRLKEA 222
D T N ++ CR GR EA
Sbjct: 326 PDMLTYNTVLTELCRGGRGSEA 347
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 27/232 (11%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLK--PNEVTYGALLNGLSKHSKFGLVS 83
P+ YNT+I+ C GN ++A LLD+M G + P+ TY L+ S + ++G+ +
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILI---SSYCRYGMQT 254
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ +R R + EA + +ML PDVVT++ LI+G
Sbjct: 255 GCRKAIR---------------------RRMWEANRMFREMLFRGFVPDVVTYNCLIDGC 293
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH-VSD 202
+ +I A E+ M V N + Y++ I Y ++ A+ M GH V
Sbjct: 294 CKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPG 353
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDA 254
T L+ + R EA + M GL P + + ++ + G A
Sbjct: 354 SSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLA 405
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+P+ +TYN LIDG C I A L ++M + G PN+VTY + + S ++ +
Sbjct: 279 FVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNE---IE 335
Query: 84 STLERMRM-----NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSV 138
+E MR +GV G +YT +I L + R EA L+ +M++A + P T+ +
Sbjct: 336 GAIEMMRTMKKLGHGV-PGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKL 394
Query: 139 LINGFLRAG 147
+ + G
Sbjct: 395 VCDALSSEG 403
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 92/222 (41%), Gaps = 17/222 (7%)
Query: 44 IEEAFRLLDEMVSH-GLKPNEVTYGALLNGLSKHSKFGLVSSTLERM--RMNGVRV-GHI 99
+++A + +H G NE+T + L+K + F + L ++ R NG V
Sbjct: 107 LQKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTA 166
Query: 100 SYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKM 159
S T ++ L + ++EA+ M + PDV ++ +IN R G A+ ++ +M
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM 226
Query: 160 YKTVL--VLNNILYSTLIYNYCK-----------MRNLKEALNTYAVMNHSGHVSDHFTC 206
+ Y+ LI +YC+ R + EA + M G V D T
Sbjct: 227 QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTY 286
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
N L+ C++ R+ A + M G P+ ++ I Y
Sbjct: 287 NCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYY 328
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 2/231 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGL-KPNEVTYGALLNGLSKHSKFGLV 82
L P Y L+ + I++AF +LD+M S +P+ TY LL S+F LV
Sbjct: 155 LEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLV 214
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASI-NPDVVTFSVLIN 141
S + M + ++ ++ G + ++ +L DML ++ PDV T +++++
Sbjct: 215 DSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILS 274
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
F GKI+ + K + ++ LI +Y K R + + M
Sbjct: 275 VFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPW 334
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
T N ++ F G K E D M G+ T F C+IN Y N+G
Sbjct: 335 TTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAG 385
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 4/207 (1%)
Query: 46 EAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMI 105
E F +L E + +P E TY LL L K + + M G+ YTA++
Sbjct: 109 EVFDMLREQTFY--QPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALL 166
Query: 106 DGLCKNRLLEEAVHLLDDMLK-ASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVL 164
++ L+++A +LD M PDV T+S L+ + A + + + +M + ++
Sbjct: 167 AAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLI 226
Query: 165 VLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV-SDHFTCNVLVATFCRSGRLKEAE 223
N + + ++ Y ++ + + M S D +T N++++ F G++ E
Sbjct: 227 TPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMME 286
Query: 224 YFMDHMSRMGLDPSTSAFDCIINSYGN 250
+ + G++P T F+ +I SYG
Sbjct: 287 SWYEKFRNFGIEPETRTFNILIGSYGK 313
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 104/231 (45%), Gaps = 2/231 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P TY L+ G A +L DEM+ GL+P Y ALL ++ + S
Sbjct: 122 PKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSI 181
Query: 86 LERMR-MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L++M+ + +Y+ ++ + L +M + I P+ VT +++++G+
Sbjct: 182 LDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYG 241
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYN-YCKMRNLKEALNTYAVMNHSGHVSDH 203
R G+ + ++++ M + ++ +I + + M + + Y + G +
Sbjct: 242 RVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPET 301
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDA 254
T N+L+ ++ + + M++M ++ +TS ++ II ++ + GDA
Sbjct: 302 RTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDA 352
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 104/207 (50%), Gaps = 9/207 (4%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +++NT+I G+ G ++A + EM ++PN VT ++L +S+ L
Sbjct: 238 SVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLH 297
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+G+R+ + +A+ID K ++E+A+H+ + + + +V+T+S +INGF
Sbjct: 298 LYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE----NVITWSAMINGFAIH 353
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS---DH 203
G+ +A + CKM + + +++ Y L+ ++E ++ M + +H
Sbjct: 354 GQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEH 413
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMS 230
+ C +V RSG L EAE F+ +M
Sbjct: 414 YGC--MVDLLGRSGLLDEAEEFILNMP 438
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 116/278 (41%), Gaps = 39/278 (14%)
Query: 22 FNLLP--NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHS-- 77
F ++P + ++YNT+I G+ G E+A R++ EM + LKP+ T ++L S++
Sbjct: 199 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDV 258
Query: 78 -----------KFGL-----VSSTLERMRMNGVRVGH-------------ISYTAMIDGL 108
+ G+ + S+L M R+ IS+ +++ G
Sbjct: 259 IKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGY 318
Query: 109 CKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNN 168
+N EA+ L M+ A + P V FS +I ++ K++ + + N
Sbjct: 319 VQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI 378
Query: 169 ILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDH 228
+ S L+ Y K N+K A + MN V D + ++ G EA +
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFDRMN----VLDEVSWTAIIMGHALHGHGHEAVSLFEE 434
Query: 229 MSRMGLDPSTSAFDCIINSYGNSG--DALKAFFLCLIK 264
M R G+ P+ AF ++ + + G D +F + K
Sbjct: 435 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK 472
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N + L+D + GNI+ A ++ D M +EV++ A++ G + H S
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNV----LDEVSWTAIIMGHALHGHGHEAVSLF 432
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKA-SINPDVVTFSVLINGFLR 145
E M+ GV+ +++ A++ L++EA + M K +N ++ ++ + + R
Sbjct: 433 EEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGR 492
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLK------EALNTYAVMNHSGH 199
AGK+ A + KM + ++STL+ + +NL+ E + T N +
Sbjct: 493 AGKLEEAYNFISKM---CVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAY 549
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGL--DPSTSAFDCIINSYG-NSGD 253
V CN+ + +GR KE M + GL P+ S + ++G SGD
Sbjct: 550 V---LMCNM----YASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGD 599
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 108/245 (44%), Gaps = 13/245 (5%)
Query: 22 FNLLP--NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF 79
F+ +P + +++NT++ G+ GN+ EA E G+K NE ++ LL K +
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
L ++ + G + ++ID K +E A D+M D+ ++ L
Sbjct: 196 QLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM----TVKDIHIWTTL 251
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
I+G+ + G + A+++ C+M + N + ++ LI Y + + AL+ + M G
Sbjct: 252 ISGYAKLGDMEAAEKLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDLFRKMIALGV 307
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD---ALK 256
+ FT + + L+ + +M R + P+ +I+ Y SG + +
Sbjct: 308 KPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASER 367
Query: 257 AFFLC 261
F +C
Sbjct: 368 VFRIC 372
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 105/238 (44%), Gaps = 14/238 (5%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L N + ++ID + G +E A R DEM + + L++G ++K G +
Sbjct: 210 FLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIH----IWTTLISG---YAKLGDME 262
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ E++ +S+TA+I G + A+ L M+ + P+ TFS +
Sbjct: 263 AA-EKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCAS 321
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ + KEI M +T + N I+ S+LI Y K +L+ + + + + D
Sbjct: 322 ASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDK---HDC 378
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG---DALKAF 258
N +++ + G +A +D M + + P+ + I+N+ +SG + L+ F
Sbjct: 379 VFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWF 436
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +++N I C G ++ A+ + EM GL P+ VTY L++ L KH + + +
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
M + G + ++ I L R +A LL M K + PD +T++++I GF A
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
+ A+ + M+ N +Y T+I+ CK N A + T
Sbjct: 296 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 355
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSR 231
+L+ + G+L +A+ M+ + R
Sbjct: 356 EMLLKGLVKKGQLDQAKSIMELVHR 380
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 61/138 (44%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN T+N I ++ +A LL M ++P+ +TY ++ G +
Sbjct: 245 PNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERV 304
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M G + Y MI LCK + A + D ++ P++ T +L+ G ++
Sbjct: 305 YTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVK 364
Query: 146 AGKINNAKEIMCKMYKTV 163
G+++ AK IM +++ V
Sbjct: 365 KGQLDQAKSIMELVHRRV 382
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 36/238 (15%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+P+ +TY+ ++D + G +EE L + V+ G KP+ + + L FG
Sbjct: 252 LMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVL------GKMFG--- 302
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
E +G+R ++L +M + P+VV ++ L+
Sbjct: 303 ---EAGDYDGIR-----------------------YVLQEMKSMDVKPNVVVYNTLLEAM 336
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
RAGK A+ + +M + L N + L+ Y K R ++AL + M D
Sbjct: 337 GRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDF 396
Query: 204 FTCNVLVATFCRSGRLKEAE-YFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
N L+ G +EAE F D + P ++ ++N YG+ G A KA L
Sbjct: 397 ILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMEL 454
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 7/215 (3%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLN--GLSKHSK 78
S ++ PN + YNTL++ G A L +EM+ GL PNE T AL+ G ++ ++
Sbjct: 319 SMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWAR 378
Query: 79 FGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASIN--PDVVTF 136
L E M+ + I Y +++ L EEA L +DM K S+ PD ++
Sbjct: 379 DAL--QLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDM-KESVQCRPDNFSY 435
Query: 137 SVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNH 196
+ ++N + GK A E+ +M K + +N + + L+ K + + + + + +
Sbjct: 436 TAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIK 495
Query: 197 SGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSR 231
G D C L++ ++AE M + R
Sbjct: 496 RGVKPDDRLCGCLLSVMALCESSEDAEKVMACLER 530
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 13/211 (6%)
Query: 46 EAFRLLDEMVSHGLKPNEVTYGALLNGLSK----HSKFGLVSSTLERMRMNGVRVGHISY 101
E LLDE + H PN +LN L + H+ F V S + + I Y
Sbjct: 139 EFLSLLDE-IPH--PPNRDNALLVLNSLREWQKTHTFFNWVKSK------SLFPMETIFY 189
Query: 102 TAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYK 161
+ L R + + +M+K + D +T+S +I R N A E +MYK
Sbjct: 190 NVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYK 249
Query: 162 TVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKE 221
T L+ + + YS ++ Y K ++E L+ Y +G D +VL F +G
Sbjct: 250 TGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDG 309
Query: 222 AEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
Y + M M + P+ ++ ++ + G +G
Sbjct: 310 IRYVLQEMKSMDVKPNVVVYNTLLEAMGRAG 340
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 73.2 bits (178), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 1/228 (0%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
YNT++ N++ L+ EM +G + T+ L++ K K G E+MR
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
+G + +Y MI LC + A+ +M++ I + T+ +L++ ++ K++
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLV 210
+ I M + + + + L+ ++C +KEAL + + D +LV
Sbjct: 312 VVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILV 371
Query: 211 ATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
CR+ R+ +A +D M R LD S + + II+ Y D KA
Sbjct: 372 KGLCRANRMVDALEIVDIMKRRKLDDS-NVYGIIISGYLRQNDVSKAL 418
Score = 63.9 bits (154), Expect = 1e-10, Method: Composition-based stats.
Identities = 65/266 (24%), Positives = 107/266 (40%), Gaps = 38/266 (14%)
Query: 24 LLPNCITYNTLIDGHCSKG--NIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
L+P+ T+ LI C K N+EEA R EM+ G P+ L L +
Sbjct: 744 LIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKD 803
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
S L+ + G V ++Y+ I LC+ LEEA+ L D T+ +++
Sbjct: 804 AKSCLDSLGKIGFPVT-VAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVH 862
Query: 142 GFLRAG-------KINNAKEIMCK----MYKTVLV-------LNNIL------------- 170
G L+ G K+N+ KEI K +Y +++V L +L
Sbjct: 863 GLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEP 922
Query: 171 ----YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFM 226
Y+ +I Y + ++EA N + M G D T + + C++ + ++A +
Sbjct: 923 SVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLL 982
Query: 227 DHMSRMGLDPSTSAFDCIINSYGNSG 252
M G+ PST F + G
Sbjct: 983 SEMLDKGIAPSTINFRTVFYGLNREG 1008
Score = 52.4 bits (124), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/216 (18%), Positives = 90/216 (41%), Gaps = 1/216 (0%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
T+ LI + I + + ++M G + + Y ++ L + L + M
Sbjct: 226 TWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEM 285
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
G+ G +Y ++D + K+ ++ + DDM++ + F L+ F +GKI
Sbjct: 286 MEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKI 345
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A E++ ++ + L+ + L+ C+ + +AL +M + D ++
Sbjct: 346 KEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRR-KLDDSNVYGII 404
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
++ + R + +A + + + G P S + I+
Sbjct: 405 ISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIM 440
Score = 50.8 bits (120), Expect = 9e-07, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P Y +LI + +E+ +M +P+ VTY A++ G K +
Sbjct: 887 PGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNA 946
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
M G +Y+ I+ LC+ E+A+ LL +ML I P + F + G R
Sbjct: 947 FRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNR 1006
Query: 146 AGKINNAKEIMCKMYKTVLV 165
GK + A+ + K K+ LV
Sbjct: 1007 EGKHDLARIALQK--KSALV 1024
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 66/145 (45%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
Y +I G+ + ++ +A + + G P TY ++ L K +F + M
Sbjct: 401 YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMI 460
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
NG+ ++ TA++ G + EA + M + I P ++S+ + R+ + +
Sbjct: 461 ENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYD 520
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLI 175
+I +M+ + +V+ + ++S +I
Sbjct: 521 EIIKIFNQMHASKIVIRDDIFSWVI 545
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 12/201 (5%)
Query: 61 PNEVTYGALLNGLSKHSKFGLVSSTLE---RMRMNGVR--VGHISYTAMIDGLCKNRLLE 115
PN +++ ++ L K +KFG TLE +M R G + ++ C R ++
Sbjct: 134 PNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMK 193
Query: 116 EAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLI 175
EA + + L + NPDV T ++L+ GF AG + + +M K N++ Y I
Sbjct: 194 EARSIFEK-LHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRI 252
Query: 176 YNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLK---EAEYFMDHMSRM 232
+CK RN EAL + M+ + T +L SG + +A D +S+
Sbjct: 253 DGFCKKRNFGEALRLFEDMD---RLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKR 309
Query: 233 GLDPSTSAFDCIINSYGNSGD 253
GL P A++ +++S GD
Sbjct: 310 GLTPDCGAYNALMSSLMKCGD 330
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 98/237 (41%), Gaps = 6/237 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ T N L+ G G++ EMV G KPN VTYG ++G K FG
Sbjct: 208 PDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRL 267
Query: 86 LERMRMNGVRVGHISYTAMI--DGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
E M + T +I G+ +N++ +A L D++ K + PD ++ L++
Sbjct: 268 FEDMDRLDFDITVQILTTLIHGSGVARNKI--KARQLFDEISKRGLTPDCGAYNALMSSL 325
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRN--LKEALNTYAVMNHSGHVS 201
++ G ++ A ++M +M + + +++ + ++ K + Y M V
Sbjct: 326 MKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVP 385
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
T +L+ FC +G + +M G P A + + + A AF
Sbjct: 386 KTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAF 442
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 93/230 (40%), Gaps = 13/230 (5%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
+N L+ C++ ++EA + +++ S P+ T LL G + M
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
G + ++Y IDG CK R EA+ L +DM + + V + LI+G A
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI 297
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLV 210
A+++ ++ K L + Y+ L+ + K ++ A+ M G D T + +
Sbjct: 298 KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMF 357
Query: 211 ATFCRSGRLKEAEY-------FMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
G +K E+ + M L P T ++ + ++G+
Sbjct: 358 I-----GMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGE 402
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN T+NT+I C G + +A+R+LDEM G +P+ +TY L + L K S+ + S
Sbjct: 292 PNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSE---ILSL 348
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
RM +GVR +Y ++ + L+ +++ M ++ PD ++ +I+ ++
Sbjct: 349 FGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQ 408
Query: 146 AGKINNAKE 154
G ++ A+E
Sbjct: 409 KGMLDMARE 417
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/238 (18%), Positives = 105/238 (44%), Gaps = 6/238 (2%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
+PN +T+ + + + ++EA D++ L+ +E ++ L++ L +H K + +
Sbjct: 114 VPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEH-KHVVEAE 171
Query: 85 TL---ERMRMNGVRVGHIS-YTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
L + + NG V + + ++ G K + M + D+ ++S+ +
Sbjct: 172 ELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYM 231
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
+ ++GK A ++ +M + L+ + Y+T+I + ++ + + M G
Sbjct: 232 DIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCE 291
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
+ T N ++ C GR+++A +D M + G P + + C+ + + L F
Sbjct: 292 PNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLF 349
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 105/222 (47%), Gaps = 14/222 (6%)
Query: 32 NTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRM 91
N+LI+ + GN + A L D + +P++V++ +++ G K K + + +M
Sbjct: 154 NSLINSYAVTGNFKLAHLLFDRIP----EPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE 209
Query: 92 NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINN 151
IS+T MI G + + +EA+ L +M + + PD V+ + ++ + G +
Sbjct: 210 KNA----ISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 265
Query: 152 AKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVA 211
K I + KT + ++++L LI Y K ++EAL + + + L++
Sbjct: 266 GKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA----WTALIS 321
Query: 212 TFCRSGRLKEA-EYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+ G +EA FM+ M +MG+ P+ F ++ + +G
Sbjct: 322 GYAYHGHGREAISKFME-MQKMGIKPNVITFTAVLTACSYTG 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 17/239 (7%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +N +I G E + L M+ N T+ +LL S S F +
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++ G + ++I+ + A HLL D + PD V+++ +I G+++
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLA-HLLFDRIP---EPDDVSWNSVIKGYVK 193
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
AGK++ A + KM + N I ++T+I Y + KEAL + M +S D+ +
Sbjct: 194 AGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVS 249
Query: 206 CNVLVATFCRSGRLKEAEYFMDHM--SRMGLDPSTSAFDCI-INSYGNSG---DALKAF 258
++ + G L++ ++ ++ +R+ +D S C+ I+ Y G +AL+ F
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKTRIRMD---SVLGCVLIDMYAKCGEMEEALEVF 305
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 72.0 bits (175), Expect = 4e-13, Method: Composition-based stats.
Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 8/213 (3%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ + YN +++ + E AF +L ++ G KP+ VTYG ++ + K+ LV
Sbjct: 589 LEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVH 648
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+M+ + + ++Y +++ L K +EAVH ++DM I + L
Sbjct: 649 EFFRKMQKSSIP-NALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCL 707
Query: 144 LRAGKIN---NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
AG+ N N + +C++ LV + Y+ LI N+K A + M
Sbjct: 708 CSAGRCNEGLNMLKKICRVANKPLV---VTYTGLIQACVDSGNIKNAAYIFDQMKKVCS- 763
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMG 233
+ TCN+++ + + G +EA MS G
Sbjct: 764 PNLVTCNIMLKAYLQGGLFEEARELFQKMSEDG 796
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 20/223 (8%)
Query: 26 PNCITYNTLIDGH--CSKGN-IEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
P+ +TY +++ C K N + E FR + + PN + Y L+N L K K
Sbjct: 626 PSPVTYGLIMEVMLACEKYNLVHEFFRKMQK----SSIPNALAYRVLVNTLWKEGKSDEA 681
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
T+E M G+ Y + LC E +++L + + + P VVT++ LI
Sbjct: 682 VHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQA 741
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH--- 199
+ +G I NA I +M K V N + + ++ Y + +EA + M+ G+
Sbjct: 742 CVDSGNIKNAAYIFDQM-KKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIK 800
Query: 200 ---------VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMG 233
+ D +T N ++ T + + Y M R G
Sbjct: 801 NSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHG 843
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 8/228 (3%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN + +NT+ GH + A +L M+S GL PN T+ +L +K F
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ G + +T++I +N LE+A + D S + DVV+++ LI G+
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDK----SPHRDVVSYTALIKGYAS 212
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G I NA+ K++ + V + + ++ +I Y + N KEAL + M + D T
Sbjct: 213 RGYIENAQ----KLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST 268
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
+V+ +SG ++ + G + + +I+ Y G+
Sbjct: 269 MVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%), Gaps = 12/207 (5%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
+ +LI + G +E+A ++ D+ + V+Y AL+ G + + +
Sbjct: 171 VHTSLISMYVQNGRLEDAHKVFDKSPHRDV----VSYTALIKGYASRGYIENAQKLFDEI 226
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ V +S+ AMI G + +EA+ L DM+K ++ PD T +++ ++G I
Sbjct: 227 PVKDV----VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSI 282
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
+++ + N + + LI Y K L+ A + + + D + N L
Sbjct: 283 ELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY----KDVISWNTL 338
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDP 236
+ + KEA M R G P
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETP 365
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 10/208 (4%)
Query: 33 TLIDGHCS-KGNIEEAFRLLD----EMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLE 87
TLI C G I A +L E G+KP + +++ L + + L
Sbjct: 341 TLITALCKNDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLL 396
Query: 88 RMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAG 147
M G G+ + ++ K L+EA +L M + PDV T++V+I+G+ + G
Sbjct: 397 DMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGG 456
Query: 148 KINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCN 207
++ A+EI+ + K L+ + Y LI YCK+ EAL M+ G + N
Sbjct: 457 MMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYN 516
Query: 208 VLVATFC-RSGRLKEAEYFMDHMSRMGL 234
L+ +FC ++ ++AE + M + GL
Sbjct: 517 KLIQSFCLKALDWEKAEVLFEEMKQKGL 544
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 92/224 (41%), Gaps = 5/224 (2%)
Query: 32 NTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRM 91
N LI G + AF + + G PN TY L L K S S E+M
Sbjct: 235 NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLK 294
Query: 92 NGVRVGHISYTAMIDGLCKNRLLEEA--VHLLDDMLKASINPDVVTFSVLINGFLR-AGK 148
+GV +I CK EEA V+ L + S+ P V + LI + G
Sbjct: 295 SGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFV--ATLITALCKNDGT 352
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
I A+E++ + +S +I++ C+MRN+K+A M G + N+
Sbjct: 353 ITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNL 412
Query: 209 LVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+V ++G L EA+ + M GL P + II+ Y G
Sbjct: 413 VVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGG 456
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 5/218 (2%)
Query: 34 LIDGHCSKGNIEEAFRL--LDEMVSHGLKPNEVTYGALLNGLSKHS-KFGLVSSTLERMR 90
+I C +G EEA+ + L + L P V L+ L K+ L +
Sbjct: 307 IITWFCKEGKAEEAYSVYELAKTKEKSLPPRFV--ATLITALCKNDGTITFAQEMLGDLS 364
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
R G ++ +I LC+ R +++A LL DM+ P F+++++ + G ++
Sbjct: 365 GEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLD 424
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLV 210
AKE++ M L + Y+ +I Y K + EA A T + L+
Sbjct: 425 EAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALI 484
Query: 211 ATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
+C+ EA ++ M R G+ P+ ++ +I S+
Sbjct: 485 RGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSF 522
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P +N ++ G+++EA +L M S GLKP+ TY +++G +K
Sbjct: 405 PGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEI 464
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF-L 144
L + ++ ++Y A+I G CK +EA+ LL++M + + P+ ++ LI F L
Sbjct: 465 LAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCL 524
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNI 169
+A A+ + +M + L LN I
Sbjct: 525 KALDWEKAEVLFEEMKQKGLHLNAI 549
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 80/169 (47%), Gaps = 1/169 (0%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMR 90
++ +I C N+++A LL +M+S G P + +++ SK L+ M
Sbjct: 375 FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLME 434
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
G++ +YT +I G K +++EA +L + K VT+ LI G+ + + +
Sbjct: 435 SRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYD 494
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYC-KMRNLKEALNTYAVMNHSG 198
A +++ +M + + N Y+ LI ++C K + ++A + M G
Sbjct: 495 EALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKG 543
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 114/265 (43%), Gaps = 34/265 (12%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ + +N +I G+ + +EA L+ +M G+KP+ +T+ AL++G S VS L
Sbjct: 182 DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEIL 241
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI------ 140
E M ++G + +S+T++I GL N E+A ML + P+ T L+
Sbjct: 242 ELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTL 301
Query: 141 --------------------NGFLRA------GKINNAKEIMCKMYKTVLVLNNILYSTL 174
+GF+R+ GK E M +++ + ++++
Sbjct: 302 AYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMI-LFRKTPKKTTVTFNSM 360
Query: 175 IYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAE-YFMDHMSRMG 233
I+ Y +A+ + M +G DH T ++ +G + F+ ++
Sbjct: 361 IFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYR 420
Query: 234 LDPSTSAFDCIINSYGNSGDALKAF 258
+ P + C+++ G +G ++A+
Sbjct: 421 IVPRLEHYACMVDLLGRAGKLVEAY 445
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 4/222 (1%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKH---SKFGLVSSTL 86
T+ LID C G ++ A L+ M + + Y LL+ + KH S F ++ L
Sbjct: 181 TFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIG-YL 239
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
E +R G YT ++ L + +E V +L+ M + PD+V +++++ G +
Sbjct: 240 EDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIAD 299
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
A ++ ++ L + Y+ I CK +++ AL + MN G + T
Sbjct: 300 EDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTY 359
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSY 248
N+L+ ++G L A+ M G++ ++ FD +I++Y
Sbjct: 360 NILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAY 401
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P Y ++ G +E +L++M ++P+ V Y +L G+ +
Sbjct: 249 PGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKL 308
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ + + G+ +Y I+GLCK +E A+ ++ M K P+VVT+++LI ++
Sbjct: 309 FDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVK 368
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRN-------LKEALNTYAVMNHSG 198
AG ++ AK + +M + N+ + +I Y ++ L+EA N V S
Sbjct: 369 AGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNM-NVFVKSS 427
Query: 199 HVSDHFTCNVLVATFCRSGRLKEAEYFMDHM 229
+ + +++ C G + +A + H+
Sbjct: 428 RIEE------VISRLCEKGLMDQAVELLAHL 452
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/239 (18%), Positives = 108/239 (45%), Gaps = 3/239 (1%)
Query: 22 FNLLPNCITYNTLIDGHCSK-GNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
F +P+ T N L+ K ++E +L + G++ E T+G L++ L + +
Sbjct: 137 FRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVD 196
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLE--EAVHLLDDMLKASINPDVVTFSV 138
+ + M + V V Y+ ++ +CK++ + + L+D+ K +P + ++V
Sbjct: 197 CATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTV 256
Query: 139 LINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
++ + G+ ++ +M + + + Y+ ++ + +A + + G
Sbjct: 257 VMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLG 316
Query: 199 HVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
D +T NV + C+ ++ A M M+++G +P+ ++ +I + +GD +A
Sbjct: 317 LAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRA 375
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
Query: 27 NCITYNTLIDGHCSKG---NIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
N +++ + CS+G ++ +L M+ G PN +G +L +
Sbjct: 173 NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAF 232
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ M +G+ V ++ ++ G ++ ++AV L + M++ +P++VT++ LI GF
Sbjct: 233 QVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGF 292
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G ++ A ++ K+ L + +L + +I+ Y ++ +EA + + V D
Sbjct: 293 VDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQ 352
Query: 204 FTCNVLVATFCRSGRL 219
+T ++++ C SG+
Sbjct: 353 YTFASILSSLCLSGKF 368
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 5/234 (2%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
SF +PN N ++D + + A + + + ++ AL + S+ +
Sbjct: 136 SFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDI---ALSHFCSRGGRGD 192
Query: 81 LVSS--TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSV 138
LV L+RM G + ++ C+ + EA ++ M+ + I+ V +S+
Sbjct: 193 LVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSM 252
Query: 139 LINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
L++GF R+G+ A ++ KM + N + Y++LI + + + EA + + G
Sbjct: 253 LVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEG 312
Query: 199 HVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
D CN+++ T+ R GR +EA + + L P F I++S SG
Sbjct: 313 LAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSG 366
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 11/197 (5%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
++ L+ G G ++A L ++M+ G PN VTY +L+ G + L ++
Sbjct: 249 VWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKV 308
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ G+ + MI + EEA + + K + PD TF+ +++ +GK
Sbjct: 309 QSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKF 368
Query: 150 NNAKEIMCKMYKTV-LVLNNIL---YSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
+ I + LV N+L +S + YN AL ++M++ D +T
Sbjct: 369 DLVPRITHGIGTDFDLVTGNLLSNCFSKIGYN-------SYALKVLSIMSYKDFALDCYT 421
Query: 206 CNVLVATFCRSGRLKEA 222
V ++ CR G + A
Sbjct: 422 YTVYLSALCRGGAPRAA 438
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/252 (18%), Positives = 92/252 (36%), Gaps = 34/252 (13%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
S L P+ + N +I + G EEA ++ + L P++ T+ ++L+ L KF
Sbjct: 310 SEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFD 369
Query: 81 LVS--------------------------------STLERMRMNGVRVGHISYTAMIDGL 108
LV L M + +YT + L
Sbjct: 370 LVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSAL 429
Query: 109 CKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNN 168
C+ A+ + ++K + D S +I+ + GK N A + + L+
Sbjct: 430 CRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDV 489
Query: 169 ILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDH 228
+ Y+ I + + ++EA + M G + T +++ C+ ++ +
Sbjct: 490 VSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRE 549
Query: 229 MSRMG--LDPST 238
+ G LDP+T
Sbjct: 550 CIQEGVELDPNT 561
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 4/221 (1%)
Query: 31 YNTLIDGHC--SKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
Y+ + GH S IE RLL E + G P +Y A+ L + K L
Sbjct: 264 YHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLA 323
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLD-DMLKASINPDVVTFSVLINGFLRAG 147
MR G Y A + LC+ L+EAV +++ +M++ P V ++VLI G G
Sbjct: 324 MRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDG 383
Query: 148 KINNAKEIMCKMYKTV-LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
K A + KM K V V N Y TL+ C+ EA M H T
Sbjct: 384 KSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETY 443
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
++++ C R EA +++ M + P +S + + S
Sbjct: 444 HMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAES 484
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSH-GLKPNEVTYGALLNGLSKHSKFGLVS 83
LP YN LI G C G EA L +M NE TY L++GL + +F S
Sbjct: 366 LPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEAS 425
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
+E M + G +Y MI GLC EAV L++M+ + P+ + L
Sbjct: 426 QVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 107/281 (38%), Gaps = 45/281 (16%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNE--VTYGALLNGLSKHSK 78
FN + ++++TL+ + +E A + + +G + N L+ L + ++
Sbjct: 109 EFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC-YGWEVNSRITALNLLMKVLCQVNR 167
Query: 79 FGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDML----KASINPDVV 134
L S + M G SY ++ G C LEEA HLL M + D+V
Sbjct: 168 SDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIV 227
Query: 135 TFSVLINGFLRAGKINNAKEIMCKMYKTVLV-----------------------LNNILY 171
+ +L++ AG++++A EI+ K+ + L + +L
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLT 287
Query: 172 STLIY-------NYCKMR-------NLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSG 217
TLI +Y M L E M G F V CR+G
Sbjct: 288 ETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG 347
Query: 218 RLKEAEYFMDHMSRMG-LDPSTSAFDCIINSYGNSGDALKA 257
+LKEA ++ G P+ ++ +I + G +++A
Sbjct: 348 KLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEA 388
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 75/192 (39%), Gaps = 2/192 (1%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
+P +Y+ + +G + E +L M S G +P YGA + L + K S
Sbjct: 295 IPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVS 354
Query: 85 TLERMRMNGVRVGHIS-YTAMIDGLCKNRLLEEAVHLLDDMLK-ASINPDVVTFSVLING 142
+ + M G + + Y +I GLC + EAV L M K S + T+ L++G
Sbjct: 355 VINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDG 414
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
R G+ A ++M +M Y +I C M EA+ M V +
Sbjct: 415 LCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPE 474
Query: 203 HFTCNVLVATFC 214
L + C
Sbjct: 475 SSVWKALAESVC 486
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 4/221 (1%)
Query: 31 YNTLIDGHC--SKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
Y+ + GH S IE RLL E + G P +Y A+ L + K L
Sbjct: 264 YHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLA 323
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLD-DMLKASINPDVVTFSVLINGFLRAG 147
MR G Y A + LC+ L+EAV +++ +M++ P V ++VLI G G
Sbjct: 324 MRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDG 383
Query: 148 KINNAKEIMCKMYKTV-LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
K A + KM K V V N Y TL+ C+ EA M H T
Sbjct: 384 KSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETY 443
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
++++ C R EA +++ M + P +S + + S
Sbjct: 444 HMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAES 484
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSH-GLKPNEVTYGALLNGLSKHSKFGLVS 83
LP YN LI G C G EA L +M NE TY L++GL + +F S
Sbjct: 366 LPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEAS 425
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
+E M + G +Y MI GLC EAV L++M+ + P+ + L
Sbjct: 426 QVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 107/281 (38%), Gaps = 45/281 (16%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNE--VTYGALLNGLSKHSK 78
FN + ++++TL+ + +E A + + +G + N L+ L + ++
Sbjct: 109 EFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC-YGWEVNSRITALNLLMKVLCQVNR 167
Query: 79 FGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDML----KASINPDVV 134
L S + M G SY ++ G C LEEA HLL M + D+V
Sbjct: 168 SDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIV 227
Query: 135 TFSVLINGFLRAGKINNAKEIMCKMYKTVLV-----------------------LNNILY 171
+ +L++ AG++++A EI+ K+ + L + +L
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLT 287
Query: 172 STLIY-------NYCKMR-------NLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSG 217
TLI +Y M L E M G F V CR+G
Sbjct: 288 ETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAG 347
Query: 218 RLKEAEYFMDHMSRMG-LDPSTSAFDCIINSYGNSGDALKA 257
+LKEA ++ G P+ ++ +I + G +++A
Sbjct: 348 KLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEA 388
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 75/192 (39%), Gaps = 2/192 (1%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
+P +Y+ + +G + E +L M S G +P YGA + L + K S
Sbjct: 295 IPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVS 354
Query: 85 TLERMRMNGVRVGHIS-YTAMIDGLCKNRLLEEAVHLLDDMLK-ASINPDVVTFSVLING 142
+ + M G + + Y +I GLC + EAV L M K S + T+ L++G
Sbjct: 355 VINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDG 414
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
R G+ A ++M +M Y +I C M EA+ M V +
Sbjct: 415 LCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPE 474
Query: 203 HFTCNVLVATFC 214
L + C
Sbjct: 475 SSVWKALAESVC 486
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 80/202 (39%), Gaps = 7/202 (3%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
+Y+ +I C G + E++ L EM GL P+ Y AL+ K + M
Sbjct: 399 SYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM 458
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ G ++ +Y +I L + EE++ L D ML+ I PD + LI G + KI
Sbjct: 459 FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKI 518
Query: 150 NNAKEIMCK-MYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
A E+ K M + + + S + N C + EA H H H
Sbjct: 519 EAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLREREHLEHTGAHVVLLK 578
Query: 209 LVATFCRSGRLKEAEYFMDHMS 230
VA KE E + HM
Sbjct: 579 CVAD------AKEVEIGIRHMQ 594
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 97/233 (41%), Gaps = 13/233 (5%)
Query: 32 NTLID---GHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
N ++D G S + + A L MVS G P T L L +H K + E
Sbjct: 328 NDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYEL 387
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
+ G SY+ MI LCK + E+ L +M K + PDV ++ LI +A
Sbjct: 388 LSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEM 447
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
I AK++ +M+ +N Y+ LI + +E+L + M G D
Sbjct: 448 IRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMS 507
Query: 209 LVATFCRSGRLKEA-EYFMDHMSRMGLDPST------SAFDCIINSYGNSGDA 254
L+ C+ +++ A E F M R D T S F + S G+SG+A
Sbjct: 508 LIEGLCKETKIEAAMEVFRKCMER---DHKTVTRRVLSEFVLNLCSNGHSGEA 557
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ YN LI+ C I A +L DEM G K N TY L+ LS+ +
Sbjct: 428 LAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESL 487
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLL 121
++M G+ Y ++I+GLCK +E A+ +
Sbjct: 488 RLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVF 525
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 83/213 (38%), Gaps = 4/213 (1%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
LP T + L C + + + + S G +Y +++ L K + +
Sbjct: 359 LPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYT 418
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L+ M+ G+ Y A+I+ CK ++ A L D+M ++ T++VLI
Sbjct: 419 ALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLS 478
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTY-AVMNHSGHVSDH 203
G+ + + KM + + + +Y +LI CK ++ A+ + M
Sbjct: 479 EEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTR 538
Query: 204 FTCNVLVATFCRSGRLKEAEYFM---DHMSRMG 233
+ V C +G EA + +H+ G
Sbjct: 539 RVLSEFVLNLCSNGHSGEASQLLREREHLEHTG 571
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 124/271 (45%), Gaps = 49/271 (18%)
Query: 22 FNLLP--NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF 79
F+ +P N I++N L+ G+ G I+EA ++ D M N V++ AL+ G + K
Sbjct: 71 FDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKV 126
Query: 80 GLVSSTLERMR--------------MNGVRVG-------------HISYTAMIDGLCKNR 112
+ S +M + R+ +I+ T+MI GLCK
Sbjct: 127 DVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEG 186
Query: 113 LLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYS 172
++EA + D+M + S V+T++ ++ G+ + ++++A++I M + + ++
Sbjct: 187 RVDEAREIFDEMSERS----VITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWT 238
Query: 173 TLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRM 232
+++ Y + +++A + VM V CN +++ + G + +A D M
Sbjct: 239 SMLMGYVQNGRIEDAEELFEVMP----VKPVIACNAMISGLGQKGEIAKARRVFDSMK-- 292
Query: 233 GLDPSTSAFDCIINSYGNSGDALKAFFLCLI 263
+ + +++ +I + +G L+A L ++
Sbjct: 293 --ERNDASWQTVIKIHERNGFELEALDLFIL 321
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 22/191 (11%)
Query: 22 FNLLP--NCITYNTLIDGHCSKGNIEEAFRLLDEM-VSHGLKPNEVTYGALLNGLSKHSK 78
F+ P + I +N++I G+ S G EEA ++ EM +S KPNEVT+ A L+ S
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYA-- 446
Query: 79 FGLVSSTL---ERMR-MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVV 134
G+V L E M + GV+ Y M+D L + EA+ ++D M ++ PD
Sbjct: 447 -GMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSM---TVEPDAA 502
Query: 135 TFSVLINGFLRAGKINNAK-------EIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEA 187
+ L+ +++ A+ EI + T ++L+N+ S + + L++
Sbjct: 503 VWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQ--GRWADVAELRKL 560
Query: 188 LNTYAVMNHSG 198
+ T V G
Sbjct: 561 MKTRLVRKSPG 571
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 109/241 (45%), Gaps = 26/241 (10%)
Query: 22 FNLLP--NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF 79
F L+P N +++ ++ G+ +G + EA L M NEV++ + GL +
Sbjct: 102 FELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRI 157
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
+ M + V ++ T MI GLC+ ++EA + D+M + +VVT++ +
Sbjct: 158 DKARKLYDMMPVKDV----VASTNMIGGLCREGRVDEARLIFDEMRER----NVVTWTTM 209
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
I G+ + NN ++ K+++ + + +++++ Y +++A + VM
Sbjct: 210 ITGY----RQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPV 265
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFF 259
++ CN ++ F G + +A D M D + + +I +Y G L+A
Sbjct: 266 IA----CNAMIVGFGEVGEISKARRVFDLME----DRDNATWRGMIKAYERKGFELEALD 317
Query: 260 L 260
L
Sbjct: 318 L 318
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 105/243 (43%), Gaps = 13/243 (5%)
Query: 22 FNLLP--NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF 79
F ++P I N +I G G I +A R+ D M + T+ ++ + F
Sbjct: 257 FEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDR----DNATWRGMIKAYERKG-F 311
Query: 80 GLVSSTL-ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSV 138
L + L +M+ GVR S +++ L+ + +++ + DV SV
Sbjct: 312 ELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASV 371
Query: 139 LINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
L+ +++ G++ AK + + + I+++++I Y +EAL + M SG
Sbjct: 372 LMTMYVKCGELVKAKLVFDRFSSKDI----IMWNSIISGYASHGLGEEALKIFHEMPSSG 427
Query: 199 HVSDHFTCNVLVATFCRSGRLKEA-EYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ + T ++ +G+L+E E F S+ + P+ + C ++ G +G KA
Sbjct: 428 TMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKA 487
Query: 258 FFL 260
L
Sbjct: 488 MEL 490
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ I +N++I G+ S G EEA ++ EM S G PN+VT A+L S K
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIF 455
Query: 87 ERMRMNGVRVGHIS-YTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
E M + Y+ +D L + +++A+ L++ M +I PD + L+
Sbjct: 456 ESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESM---TIKPDATVWGALLGA 509
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 12/224 (5%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N + + TLI G EAF L +M+ + PN+ T A+L S S
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVH 335
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
M NG+ + +++T+ ID + ++ A + D M + +V+++S +IN F
Sbjct: 336 GYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPER----NVISWSSMINAFGIN 391
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV---SDH 203
G A + KM +V N++ + +L+ N+KE + M V +H
Sbjct: 392 GLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEH 451
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
+ C +V R+G + EA+ F+D+M + P SA+ ++++
Sbjct: 452 YAC--MVDLLGRAGEIGEAKSFIDNMP---VKPMASAWGALLSA 490
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 99/239 (41%), Gaps = 1/239 (0%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
N+ P+ ++YN+L+ + G E+ ++ E+ + + P+ TY + L+ +
Sbjct: 151 ELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDIS 210
Query: 81 LVSSTLERMRMNG-VRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
V +E M +G V +Y+ M L ++A L ++ + D + L
Sbjct: 211 GVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFL 270
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
I + R GK+ I + + +N+ Y +I K+ +L A + +
Sbjct: 271 ITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCS 330
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
D NVL+ + + G +++A + R G + ++ ++ Y SGD +A
Sbjct: 331 TYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARAL 389
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 20/187 (10%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +++ +LI G G E+A L D+MVSHG+KPNEVT+ L+ S G V
Sbjct: 303 DVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYAC---SHVGFVEKGR 359
Query: 87 ERMRM----NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
E + G+R YT ++D L ++ LL+EA +L+ M PD T++ L++
Sbjct: 360 ELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTM---PFPPDEPTWAALLSA 416
Query: 143 FLRAGK----INNAKEIMC----KMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVM 194
R G+ I A ++ K T ++L+NI S ++ K+ + L V
Sbjct: 417 CKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWG--KVSEARRKLGEMEVR 474
Query: 195 NHSGHVS 201
GH S
Sbjct: 475 KDPGHSS 481
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 118/239 (49%), Gaps = 10/239 (4%)
Query: 22 FNLLP--NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF 79
F+ +P + +++N ++ G+ G E+A RL ++M+ G++PNE T+ +++ S +
Sbjct: 221 FDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADP 280
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
L S ++ + VR+ TA++D K R ++ A + +++ ++VT++ +
Sbjct: 281 SLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAM 337
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVM-NHSG 198
I+G+ R G +++A+++ M K N + +++LI Y A+ + M ++
Sbjct: 338 ISGYTRIGDMSSARQLFDTMPKR----NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGD 393
Query: 199 HVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
D T +++ L+ + +D++ + + + S + +I Y G+ +A
Sbjct: 394 SKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEA 452
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Query: 22 FNLLP--NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHG-LKPNEVTYGALLNGLSKHSK 78
F+ +P N +++N+LI G+ G A ++M+ +G KP+EVT ++L+ +
Sbjct: 354 FDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMAD 413
Query: 79 FGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSV 138
L ++ +R N +++ Y ++I + L EA + D+M + DVV+++
Sbjct: 414 LELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNT 469
Query: 139 LINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
L F G ++ KM + + + Y++++ + LKE + + +
Sbjct: 470 LFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNP- 528
Query: 199 HVSDHFTC 206
++DH+ C
Sbjct: 529 -LADHYAC 535
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 88/229 (38%), Gaps = 39/229 (17%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
NC L+D H +I+ A R+ +E+ G + N VT+ A+++G ++
Sbjct: 298 NCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLF 354
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLK-ASINPDVVTFSVLINGFLR 145
+ M V +S+ ++I G N A+ +DM+ PD VT +++
Sbjct: 355 DTMPKRNV----VSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGH 410
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEA------------------ 187
+ I+ + K + LN+ Y +LI+ Y + NL EA
Sbjct: 411 MADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTL 470
Query: 188 -------------LNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAE 223
LN + M G D T ++ R+G LKE +
Sbjct: 471 FTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQ 519
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 4/215 (1%)
Query: 44 IEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTA 103
+ A L +E S G+K + ++ ALL L + S S + N + SY
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGN-IPFDSCSYNI 260
Query: 104 MIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTV 163
MI G K +EE +L +M+++ PD +++S LI G R G+IN++ EI +
Sbjct: 261 MISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKG 320
Query: 164 LVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAE 223
V + +Y+ +I N+ R+ E++ Y M + T + LV+ + ++ +A
Sbjct: 321 NVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDAL 380
Query: 224 YFMDHMSRMGLDPST---SAFDCIINSYGNSGDAL 255
+ M G+ P+T ++F + SYG A+
Sbjct: 381 EIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAM 415
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 93/224 (41%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N+ + +YN +I G G +EE ++L EMV G P+ ++Y L+ GL + +
Sbjct: 250 NIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDS 309
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ ++ G Y AMI R +E++ ML P++ T+S L++G
Sbjct: 310 VEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSG 369
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
++ K+++A EI +M ++ L ++ + C A+ Y +G
Sbjct: 370 LIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRIS 429
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIIN 246
+L+ R G+ D M G ++ I++
Sbjct: 430 ESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVD 473
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 64/149 (42%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN TY+ L+ G + +A + +EM+S G+ P + L L +
Sbjct: 358 PNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVI 417
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
++ R G R+ +Y ++ L + +++ D+M ++ DV + +++G
Sbjct: 418 YQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCI 477
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTL 174
G + NA +M + + N +YS L
Sbjct: 478 IGHLENAVLVMEEAMRKGFCPNRFVYSRL 506
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 93/233 (39%), Gaps = 3/233 (1%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKP-NEVTYGALLNGLSKHSKF 79
SF + + ++N L+ C + ++ A + + G P + +Y +++G SK +
Sbjct: 214 SFGVKCSTESFNALLRCLCERSHVSAAKSVFN--AKKGNIPFDSCSYNIMISGWSKLGEV 271
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
+ L+ M +G +SY+ +I+GL + + ++V + D++ PD ++ +
Sbjct: 272 EEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAM 331
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
I F+ A + + +M N YS L+ K R + +AL + M G
Sbjct: 332 ICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGV 391
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+ + C G A + G S SA+ ++ G
Sbjct: 392 LPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFG 444
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 114/241 (47%), Gaps = 26/241 (10%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
+++NT+I G+ S GN+ E +LL M GL+P++ T+GA L+ VS T+
Sbjct: 211 VSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLS----------VSGTMCD 260
Query: 89 MRMNGVRVGHISYTAM-IDGLCKNRLL--------EEAVHLLDDMLKASINPDVVTFSVL 139
+ M + I T +D K L+ EEA + +L+ N DVV ++V+
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASY---RVLETIPNKDVVCWTVM 317
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
I+G +R G+ A + +M ++ L++ ++++ + ++ + + + + G+
Sbjct: 318 ISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGY 377
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFF 259
D N L+ + + G L ++ + M+ L +++ II+ Y + D KA
Sbjct: 378 TLDTPALNSLITMYAKCGHLDKSLVIFERMNERDL----VSWNAIISGYAQNVDLCKALL 433
Query: 260 L 260
L
Sbjct: 434 L 434
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 96/244 (39%), Gaps = 37/244 (15%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
LLP+ T+ +L+ S + + +++ +G + +L+N ++KFGL+
Sbjct: 41 KLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVN---LYAKFGLL 97
Query: 83 S---STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
+ E MR V + +TAMI + ++ EA L+++M I P VT +
Sbjct: 98 AHARKVFEEMRERDV----VHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEM 153
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNY-CKMRNLKEALNTYAVMNHSG 198
++G L ++ + +IY + C + + LN Y +H G
Sbjct: 154 LSGVLEITQLQCLHDF-----------------AVIYGFDCDIAVMNSMLNLYCKCDHVG 196
Query: 199 HVSDHF---------TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYG 249
D F + N +++ + G + E + M GL P F ++ G
Sbjct: 197 DAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSG 256
Query: 250 NSGD 253
D
Sbjct: 257 TMCD 260
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 110/234 (47%), Gaps = 15/234 (6%)
Query: 22 FNLLP--NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF 79
F+ +P N T+N +I G+ S G+ A L +E+ + N VT+ ++ G K +
Sbjct: 104 FDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRIEI 160
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
ERM V +++ M+ NR +E+A +D+ + + +S++
Sbjct: 161 EKARELFERMPFELKNVK--AWSVMLGVYVNNRKMEDARKFFEDIPE----KNAFVWSLM 214
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
++G+ R G ++ A+ I +++ LV+ ++TLI Y + +A++ + M G+
Sbjct: 215 MSGYFRIGDVHEARAIFYRVFARDLVI----WNTLIAGYAQNGYSDDAIDAFFNMQGEGY 270
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
D T + +++ +SGRL ++ G++ + + +I+ Y GD
Sbjct: 271 EPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGD 324
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 104/260 (40%), Gaps = 32/260 (12%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSH--GLKPNEVTYGALLNGLSKHSKFGLVSS 84
N +T+ +I G+ + IE+A L + M +K V G +N
Sbjct: 143 NTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFED 202
Query: 85 TLER------MRMNG-VRVGHIS----------------YTAMIDGLCKNRLLEEAVHLL 121
E+ + M+G R+G + + +I G +N ++A+
Sbjct: 203 IPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAF 262
Query: 122 DDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKM 181
+M PD VT S +++ ++G+++ +E+ + + LN + + LI Y K
Sbjct: 263 FNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKC 322
Query: 182 RNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAF 241
+L+ A + + ++ V CN +++ G+ KEA M + L P F
Sbjct: 323 GDLENATSVFESIS----VRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITF 378
Query: 242 DCIINSYGNSG---DALKAF 258
++ + + G + LK F
Sbjct: 379 IAVLTACVHGGFLMEGLKIF 398
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 42/247 (17%)
Query: 32 NTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG----------- 80
N +++G C GN+ EA R ++++ +P+ V+YG ++N L+K K G
Sbjct: 251 NMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWD 310
Query: 81 ---------------------LVSSTLERMR---MNGVRVGHISYTAMIDGLCKNRLLEE 116
+ LE R G ++Y +++ LCK R E+
Sbjct: 311 TRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEK 370
Query: 117 AVHLLDDM-LK-ASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTL 174
L+++M LK S +P+ VTFS L+ R+ ++ ++ +M K + + LY+ +
Sbjct: 371 VWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDI---VLERMAKNKCEMTSDLYNLM 427
Query: 175 IYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEA-EYFMDHMSR-M 232
Y + ++ ++ M SG D T + + G++ EA YF + MS+ M
Sbjct: 428 FRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGM 487
Query: 233 GLDPSTS 239
+P T
Sbjct: 488 VPEPRTE 494
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 1/221 (0%)
Query: 25 LPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
L + + YN ++D EE ++ DEM NE TY LLN + K
Sbjct: 140 LSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVG 199
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
ER + G+ +++ ++ LC+ + +E A L + D+ ++++NG+
Sbjct: 200 VFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSR-RREFGCDIKAMNMILNGWC 258
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHF 204
G ++ AK + + + + Y T+I K L +A+ Y M + D
Sbjct: 259 VLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVK 318
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
CN ++ C R+ EA +S G DP+ ++ ++
Sbjct: 319 ICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLL 359
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHG--LKPNEVTYGALLNGLSKHSKFGLVS 83
PN +TYN+L+ C E+ + L++EM G PN+VT+ LL S+ SK V
Sbjct: 350 PNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLK-YSQRSKD--VD 406
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
LERM N + Y M + E+ + +M ++ + PD T+++ I+G
Sbjct: 407 IVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGL 466
Query: 144 LRAGKINNA----KEIMCK 158
GKI A +E+M K
Sbjct: 467 HTKGKIGEALSYFQEMMSK 485
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 107/257 (41%), Gaps = 38/257 (14%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTY---------------GALLN 71
+ +++N++I G+ G ++A L +M G +P+E T G LL
Sbjct: 197 DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLE 256
Query: 72 GLSKHSKFGLVS----------------STLERMRMNGVRVGHISYTAMIDGLCKNRLLE 115
++ K GL + + R+ ++ +++TAMI +N
Sbjct: 257 EMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSS 316
Query: 116 EAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLI 175
EA L +M K ++PD T S +++ G + K+I + L N + + L+
Sbjct: 317 EAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLV 376
Query: 176 YNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLD 235
Y K ++EAL + M V + T N ++ + G KEA D RM +
Sbjct: 377 DMYGKCGRVEEALRVFEAMP----VKNEATWNAMITAYAHQGHAKEALLLFD---RMSVP 429
Query: 236 PSTSAFDCIINSYGNSG 252
PS F ++++ ++G
Sbjct: 430 PSDITFIGVLSACVHAG 446
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 101/264 (38%), Gaps = 46/264 (17%)
Query: 26 PNCITYNTLIDGHCSKGNIEEA-FRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
PN ++N +I G + N EA L M GLKP++ TY + +K + G+ S
Sbjct: 94 PNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRS 153
Query: 85 T--------LER----------MRMNGVRVGH-------------ISYTAMIDGLCKNRL 113
LER M +VG+ +S+ +MI G +
Sbjct: 154 VHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGY 213
Query: 114 LEEAVHLLDDMLKASINPDVVTFSVLIN-----GFLRAGKINNAKEIMCKMYKTVLVLNN 168
++A+ L M + PD T ++ G LR G++ I K + L+
Sbjct: 214 AKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKK-----IGLST 268
Query: 169 ILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDH 228
L S LI Y K +L A + M D ++ + ++G+ EA
Sbjct: 269 FLGSKLISMYGKCGDLDSARRVFNQMIK----KDRVAWTAMITVYSQNGKSSEAFKLFFE 324
Query: 229 MSRMGLDPSTSAFDCIINSYGNSG 252
M + G+ P ++++ G+ G
Sbjct: 325 MEKTGVSPDAGTLSTVLSACGSVG 348
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 9/228 (3%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGL----SKHSK 78
+ P+ + LI G C ++EA RL EM G + Y +L+ + K
Sbjct: 240 EIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDP 299
Query: 79 FGL---VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVT 135
F L V L M GV ++ +I+ LCK R EEA+ L M + PD T
Sbjct: 300 FKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAET 359
Query: 136 FSVLINGFLRAGKINNAKEIMCKMYKTVL--VLNNILYSTLIYNYCKMRNLKEALNTYAV 193
+ VLI +A +I E++ KM +LN Y + C + L+ A++ +
Sbjct: 360 YLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKS 419
Query: 194 MNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAF 241
M +G T ++L+ C + +L A ++ G+ S +
Sbjct: 420 MKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEY 467
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 68.6 bits (166), Expect = 4e-12, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 107/230 (46%), Gaps = 10/230 (4%)
Query: 33 TLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLS---KHSKFGLVSST-LER 88
++ID + G +E+A+ L E G P VT L+N L+ KH + +S T LE+
Sbjct: 709 SMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEK 768
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
+ + + Y +I + + L+ A + + M + + + T++ +I+ + R +
Sbjct: 769 ----NIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQ 824
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
++ A EI ++ L L+ +Y+ +I +Y K + EAL+ ++ M G + N+
Sbjct: 825 LDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNM 884
Query: 209 LVATFCRSGRL-KEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+V C + RL E + + M R G S + +I Y S +A
Sbjct: 885 MV-KICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEA 933
Score = 64.3 bits (155), Expect = 8e-11, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 100/238 (42%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
N+ + + YNTLI G ++ A + + M + G+ + TY +++ + +
Sbjct: 769 NIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKA 828
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
R +G+ + YT MI K + EA+ L +M K I P ++++++
Sbjct: 829 IEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKI 888
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSD 202
+ + E++ M + + Y TLI Y + EA T ++ G
Sbjct: 889 CATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLS 948
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
H + L++ ++G ++EAE MS G+ P ++ I+ Y GDA K
Sbjct: 949 HSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILF 1006
Score = 63.2 bits (152), Expect = 2e-10, Method: Composition-based stats.
Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 3/235 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN TY ++ + +G EEA + EM S G P EVTY ++++ K +
Sbjct: 291 PNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGL 350
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
E MR G+ + + M+ K +A+ L DM + I D V ++I + +
Sbjct: 351 YEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGK 410
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G ++A+ + + + L+ + Y + + N+ +AL+ +M F
Sbjct: 411 LGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFA 470
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYG--NSGDALKAF 258
V++ + + + AE +S+ GL P S+ + ++N Y N G+ K F
Sbjct: 471 YIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGF 524
Score = 60.8 bits (146), Expect = 9e-10, Method: Composition-based stats.
Identities = 46/193 (23%), Positives = 84/193 (43%)
Query: 66 YGALLNGLSKHSKFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDML 125
Y +L+ L K S G V M GV +YT ++ K EEA+ +M
Sbjct: 261 YNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMK 320
Query: 126 KASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLK 185
P+ VT+S +I+ ++AG A + M +V +N +T++ Y K N
Sbjct: 321 SLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYP 380
Query: 186 EALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
+AL+ +A M + +D +++ + + G +A+ + R+ L + +
Sbjct: 381 KALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMS 440
Query: 246 NSYGNSGDALKAF 258
+ NSG+ +KA
Sbjct: 441 QVHLNSGNVVKAL 453
Score = 58.5 bits (140), Expect = 5e-09, Method: Composition-based stats.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 1/229 (0%)
Query: 32 NTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRM 91
N +I +G++ +A + D ++ GL+ E T L+ + K + L
Sbjct: 639 NRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLK-EAKRLYLAAG 697
Query: 92 NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINN 151
G +MID + LE+A L + + +P VT S+L+N GK
Sbjct: 698 ESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHRE 757
Query: 152 AKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVA 211
A+ I + + L+ + Y+TLI + L+ A Y M+ SG T N +++
Sbjct: 758 AEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMIS 817
Query: 212 TFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
+ R +L +A + R GL + +I YG G +A L
Sbjct: 818 VYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSL 866
Score = 58.2 bits (139), Expect = 5e-09, Method: Composition-based stats.
Identities = 43/227 (18%), Positives = 98/227 (43%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ + Y ++ + G I+ A EM+ G +P+ V G +L ++ + + +
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ ++ + + Y M+ L K + + L +M++ + P+ T++++++ + +
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAK 305
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFT 205
G A + +M V + YS++I K + ++A+ Y M G V ++T
Sbjct: 306 QGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYT 365
Query: 206 CNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
C +++ + ++ +A M R + II YG G
Sbjct: 366 CATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLG 412
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 112/260 (43%), Gaps = 43/260 (16%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS-- 83
PN N+LI H +AF + EM GL + TY LL S S +V
Sbjct: 80 PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMM 139
Query: 84 -STLERMRMN-------------------GVRVG-----------HISYTAMIDGLCKNR 112
+ +E++ ++ GVR +S+ +M+ GL K
Sbjct: 140 HNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAG 199
Query: 113 LLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYS 172
L +A L D+M + D+++++ +++G+ R +++ A E+ KM + N + +S
Sbjct: 200 ELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWS 251
Query: 173 TLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRM 232
T++ Y K +++ A + M + T +++A + G LKEA+ +D M
Sbjct: 252 TMVMGYSKAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 309
Query: 233 GLDPSTSAFDCIINSYGNSG 252
GL +A I+ + SG
Sbjct: 310 GLKFDAAAVISILAACTESG 329
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 106/233 (45%), Gaps = 12/233 (5%)
Query: 22 FNLLP--NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF 79
F+ +P + I++NT++DG+ + +AF L ++M N V++ ++ G SK
Sbjct: 208 FDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDM 263
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
+ ++M + V +++T +I G + LL+EA L+D M+ + + D +
Sbjct: 264 EMARVMFDKMPLPAKNV--VTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISI 321
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
+ +G ++ I + ++ L N + + L+ Y K NLK+A + + +
Sbjct: 322 LAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPK--- 378
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
D + N ++ G KEA M R G+ P F ++ S ++G
Sbjct: 379 -KDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAG 430
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 119/239 (49%), Gaps = 28/239 (11%)
Query: 22 FNLLP----NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHS 77
F+ +P N +T+ +I G+ KG ++EA RL+D+MV+ GLK A+++ L+ +
Sbjct: 270 FDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLK---FDAAAVISILAACT 326
Query: 78 KFGLVSSTLERMRMNGV----RVGHISYT--AMIDGLCKNRLLEEAVHLLDDMLKASINP 131
+ GL+S MR++ + +G +Y A++D K L++A + +D+ K
Sbjct: 327 ESGLLSLG---MRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK---- 379
Query: 132 DVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTY 191
D+V+++ +++G G A E+ +M + + + + + ++ + + E ++ +
Sbjct: 380 DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYF 439
Query: 192 AVMNHSGHV---SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
M + +H+ C LV R GRLKEA + + M ++P+ + ++ +
Sbjct: 440 YSMEKVYDLVPQVEHYGC--LVDLLGRVGRLKEA---IKVVQTMPMEPNVVIWGALLGA 493
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 9/162 (5%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
NL N N L+D + GN+++AF + +++ L V++ +L+GL H
Sbjct: 345 NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDL----VSWNTMLHGLGVHGHGKEA 400
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKA-SINPDVVTFSVLIN 141
RMR G+R +++ A++ L++E + M K + P V + L++
Sbjct: 401 IELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVD 460
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRN 183
R G++ A K+ +T+ + N++ + C+M N
Sbjct: 461 LLGRVGRLKEA----IKVVQTMPMEPNVVIWGALLGACRMHN 498
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 6/135 (4%)
Query: 103 AMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKT 162
AM+DGLCK+ L++EA+ L M P+VV ++ ++ F +A KI +AK I KM
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 163 VLVLNNILYSTLI---YNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRL 219
+ N Y L+ YN C M L +A+ + M SGH + T LV CR +
Sbjct: 196 GIAPNAFSYGVLVQGLYN-CNM--LDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGV 252
Query: 220 KEAEYFMDHMSRMGL 234
++A+ +D +++ G
Sbjct: 253 EQAQSAIDTLNQKGF 267
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+PN + ++DG C G ++EA +L M G P V Y A++ K K
Sbjct: 130 LIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAK 186
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+M+ NG+ SY ++ GL +L++AV +ML++ +P+V TF L++
Sbjct: 187 RIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDAL 246
Query: 144 LRAGKINNAKEIMCKMYKTVLVLN 167
R + A+ + + + +N
Sbjct: 247 CRVKGVEQAQSAIDTLNQKGFAVN 270
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 14/167 (8%)
Query: 45 EEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER---MRMNGVRVGHISY 101
E++ + +M GL PN V A+L+GL K GLV ++ MR G + Y
Sbjct: 116 EDSDEIFKKMKEGGLIPNAV---AMLDGLCKD---GLVQEAMKLFGLMRDKGTIPEVVIY 169
Query: 102 TAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYK 161
TA+++ CK +E+A + M I P+ ++ VL+ G +++A +M +
Sbjct: 170 TAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLE 229
Query: 162 TVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
+ N + L+ C+++ +++A + +N G F NV
Sbjct: 230 SGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG-----FAVNV 271
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 6/135 (4%)
Query: 103 AMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKT 162
AM+DGLCK+ L++EA+ L M P+VV ++ ++ F +A KI +AK I KM
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 163 VLVLNNILYSTLI---YNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRL 219
+ N Y L+ YN C M L +A+ + M SGH + T LV CR +
Sbjct: 196 GIAPNAFSYGVLVQGLYN-CNM--LDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGV 252
Query: 220 KEAEYFMDHMSRMGL 234
++A+ +D +++ G
Sbjct: 253 EQAQSAIDTLNQKGF 267
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L+PN + ++DG C G ++EA +L M G P V Y A++ K K
Sbjct: 130 LIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAK 186
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+M+ NG+ SY ++ GL +L++AV +ML++ +P+V TF L++
Sbjct: 187 RIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDAL 246
Query: 144 LRAGKINNAKEIMCKMYKTVLVLN 167
R + A+ + + + +N
Sbjct: 247 CRVKGVEQAQSAIDTLNQKGFAVN 270
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 14/167 (8%)
Query: 45 EEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER---MRMNGVRVGHISY 101
E++ + +M GL PN V A+L+GL K GLV ++ MR G + Y
Sbjct: 116 EDSDEIFKKMKEGGLIPNAV---AMLDGLCKD---GLVQEAMKLFGLMRDKGTIPEVVIY 169
Query: 102 TAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYK 161
TA+++ CK +E+A + M I P+ ++ VL+ G +++A +M +
Sbjct: 170 TAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLE 229
Query: 162 TVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
+ N + L+ C+++ +++A + +N G F NV
Sbjct: 230 SGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG-----FAVNV 271
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 105/205 (51%), Gaps = 18/205 (8%)
Query: 22 FNLLP--NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSK- 78
F+ +P + ++YN++IDG+ G I A L D M N +++ ++++G ++ S
Sbjct: 179 FDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPME--MKNLISWNSMISGYAQTSDG 236
Query: 79 FGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSV 138
+ S M + IS+ +MIDG K+ +E+A L D M + DVVT++
Sbjct: 237 VDIASKLFADMPEKDL----ISWNSMIDGYVKHGRIEDAKGLFDVMPRR----DVVTWAT 288
Query: 139 LINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
+I+G+ + G +++AK + +M + + Y++++ Y + + EAL ++ M
Sbjct: 289 MIDGYAKLGFVHHAKTLFDQMPHR----DVVAYNSMMAGYVQNKYHMEALEIFSDMEKES 344
Query: 199 H-VSDHFTCNVLVATFCRSGRLKEA 222
H + D T +++ + GRL +A
Sbjct: 345 HLLPDDTTLVIVLPAIAQLGRLSKA 369
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 5/221 (2%)
Query: 21 SFNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
FN+ + + YN +I KG++ A L+ EM GL P+ +TY +++NG K
Sbjct: 158 EFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKID 217
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKAS----INPDVVTF 136
+ M + + ++Y+ +++G+CK+ +E A+ LL +M K I+P+ VT+
Sbjct: 218 DAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTY 277
Query: 137 SVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYA-VMN 195
+++I F ++ A ++ +M + N + LI + +AL+ +
Sbjct: 278 TLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLV 337
Query: 196 HSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDP 236
G VS + + R R +EAE M G+ P
Sbjct: 338 KLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRP 378
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 4/143 (2%)
Query: 120 LLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYC 179
L+ +M + PDV+T++ +ING+ AGKI++A + +M K VLN++ YS ++ C
Sbjct: 187 LIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVC 246
Query: 180 KMRNLKEALNTYAVMNHS---GHVSDH-FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLD 235
K +++ AL A M G +S + T +++ FC R++EA +D M G
Sbjct: 247 KSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCM 306
Query: 236 PSTSAFDCIINSYGNSGDALKAF 258
P+ +I + + +KA
Sbjct: 307 PNRVTACVLIQGVLENDEDVKAL 329
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 96/201 (47%), Gaps = 6/201 (2%)
Query: 39 CSKGNI-EEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVG 97
C++ N+ +EA +L + + + V Y ++ + + ++ M G+
Sbjct: 140 CNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPD 199
Query: 98 HISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMC 157
I+YT+MI+G C +++A L +M K + VT+S ++ G ++G + A E++
Sbjct: 200 VITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLA 259
Query: 158 KMYKT----VLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATF 213
+M K ++ N + Y+ +I +C+ R ++EAL M + G + + T VL+
Sbjct: 260 EMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGV 319
Query: 214 CRSGR-LKEAEYFMDHMSRMG 233
+ +K +D + ++G
Sbjct: 320 LENDEDVKALSKLIDKLVKLG 340
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 93/230 (40%), Gaps = 36/230 (15%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNG-LSKHSKFGLVSS 84
PN +TY +I C K +EEA +LD M + G PN VT L+ G L +S
Sbjct: 272 PNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSK 331
Query: 85 TLERM-RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
++++ ++ GV + +A + L + + EEA + ML + PD + S
Sbjct: 332 LIDKLVKLGGVSLSECFSSATV-SLIRMKRWEEAEKIFRLMLVRGVRPDGLACS------ 384
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+++ + +L L L+Y + +++K +++ H+
Sbjct: 385 --------------HVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDI---HA------ 421
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
VL+ C+ G EA M + S + II + +GD
Sbjct: 422 ----VLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGD 467
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 68.2 bits (165), Expect = 5e-12, Method: Composition-based stats.
Identities = 49/221 (22%), Positives = 101/221 (45%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM 89
TYN L+ +KG +AF + + M + TY ++ L+K + ++M
Sbjct: 280 TYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQM 339
Query: 90 RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKI 149
+ +R +++++D + K L+ ++ + +M P F LI+ + +AGK+
Sbjct: 340 KERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKL 399
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
+ A + +M K+ N LY+ +I ++ K L+ A+ + M +G + T + L
Sbjct: 400 DTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCL 459
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGN 250
+ SG++ A + M+ GL P S++ ++ N
Sbjct: 460 LEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLAN 500
Score = 63.9 bits (154), Expect = 9e-11, Method: Composition-based stats.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 8/226 (3%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGAL----LNGLSKHSKFGLVSSTL 86
YN +I +E AF + G K + TY L LN + F +
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEI----Y 301
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
E M + +Y +I L K+ L+ A L M + + P FS L++ +A
Sbjct: 302 ESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKA 361
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G+++ + ++ +M + ++ +LI +Y K L AL + M SG +
Sbjct: 362 GRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLY 421
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+++ + +SG+L+ A M + G P+ S + C++ + SG
Sbjct: 422 TMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSG 467
Score = 56.6 bits (135), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 67/136 (49%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ +++L+D G ++ + ++ EM G +P+ + +L++ +K K
Sbjct: 344 LRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTAL 403
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+ M+ +G R YT +I+ K+ LE A+ + DM KA P T+S L+
Sbjct: 404 RLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMH 463
Query: 144 LRAGKINNAKEIMCKM 159
+G++++A +I M
Sbjct: 464 AGSGQVDSAMKIYNSM 479
Score = 55.8 bits (133), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/208 (20%), Positives = 92/208 (44%), Gaps = 1/208 (0%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F P+ + +LID + G ++ A RL DEM G +PN Y ++ +K K +
Sbjct: 377 FGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEV 436
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
+ + M G +Y+ +++ + ++ A+ + + M A + P + ++ L+
Sbjct: 437 AMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLT 496
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
++ A +I+ +M K + ++ S ++ Y K ++ AL M SG +
Sbjct: 497 LLANKRLVDVAGKILLEM-KAMGYSVDVCASDVLMIYIKDASVDLALKWLRFMGSSGIKT 555
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHM 229
++F L + ++G A ++ +
Sbjct: 556 NNFIIRQLFESCMKNGLYDSARPLLETL 583
Score = 48.5 bits (114), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 86/188 (45%), Gaps = 1/188 (0%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
LP TY+ L++ H G ++ A ++ + M + GL+P +Y +LL L+ +
Sbjct: 449 FLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAG 508
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
L M+ G V + + ++ K+ ++ A+ L M + I + L
Sbjct: 509 KILLEMKAMGYSV-DVCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESC 567
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
++ G ++A+ ++ + + ++ +LY++++ + + ++ + ++++ + H +
Sbjct: 568 MKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDKERQLMSILSATKHKAHA 627
Query: 204 FTCNVLVA 211
F C +
Sbjct: 628 FMCGLFTG 635
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 115/284 (40%), Gaps = 46/284 (16%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF------ 79
P+ T+ L+ G S N+E+A + ++M G + V Y L+ G K+S
Sbjct: 199 PSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKL 258
Query: 80 -----------------------GLVSSTLERMRM----------NGVRVGHISYTAMID 106
G +E+ M + VR+ ++Y +++
Sbjct: 259 YQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLE 318
Query: 107 GLCKNRLLEEAVHLLDDMLKASINP-----DVVTFSVLINGFLRAGKINNAKEIMCKMYK 161
L +N +EA+ L D + K P ++ TF+V++NG+ GK A E+ +M
Sbjct: 319 ALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGD 378
Query: 162 TVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKE 221
+ + ++ L+ C L EA Y M D +T +L+ T + G++ E
Sbjct: 379 FKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDE 438
Query: 222 AEYFMDHMSRMGLDPSTSAFDCIINSYGNSG--DALKAFFLCLI 263
+ M L P+ + ++ + + +G D K+FF ++
Sbjct: 439 GAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMV 482
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 6/208 (2%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEV-----TYGALLNGLSKHSKFGL 81
+ + YN +++ G +EA +L D + P + T+ ++NG KF
Sbjct: 309 SAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEE 368
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
+M +S+ +++ LC N LL EA L +M + ++ PD T+ +L++
Sbjct: 369 AMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMD 428
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
+ GKI+ M ++ L N +Y+ L K L +A + + +M +
Sbjct: 429 TCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMD 488
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHM 229
D ++ +GRL E +D M
Sbjct: 489 DE-AYKFIMRALSEAGRLDEMLKIVDEM 515
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
N T+N +++G+C+ G EEA + +M P+ +++ L+N L +
Sbjct: 349 NLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLY 408
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
M V+ +Y ++D K ++E M+++++ P++ ++ L + ++A
Sbjct: 409 GEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKA 468
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVM--NHSGHVSDHF 204
GK+++AK M + L +++ Y ++ + L E L M + + VS+
Sbjct: 469 GKLDDAKSFF-DMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEEL 527
Query: 205 TCNVLVATFCRSGRLKEAEYFMDHMSRM 232
+ + GR + E M+ R+
Sbjct: 528 Q-EFVKEELRKGGREGDLEKLMEEKERL 554
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
F P+ +++N L++ C + EA +L EM +KP+E TYG L++ K K
Sbjct: 379 FKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDE 438
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
++ + M + +R Y + D L K L++A DM+ + + D + ++
Sbjct: 439 GAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMVSKLKMDDEAYKFIMR 497
Query: 142 GFLRAGKINNAKEIMCKM 159
AG+++ +I+ +M
Sbjct: 498 ALSEAGRLDEMLKIVDEM 515
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 23/225 (10%)
Query: 32 NTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRM 91
TLI+ H + I+E E Y L+ + S F T E+M
Sbjct: 87 ETLIESHKNDPKIKE----------------EPFYSTLIRSYGQASMFNHAMRTFEQMDQ 130
Query: 92 NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKA--SINPDVVTFSVLINGFLRAGKI 149
G +S+ A+++ ++ ++ L D++ + I PD +++ +LI + +G
Sbjct: 131 YGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTP 190
Query: 150 NNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVL 209
A EIM +M + + I ++T++ + K L+ A N + M G D+ NV
Sbjct: 191 EKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVR 250
Query: 210 VATFCRSG--RLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
+ + + R+KE ++ MS MGL P T +++ ++ +Y G
Sbjct: 251 IMSAQKESPERVKE---LIEEMSSMGLKPDTISYNYLMTAYCERG 292
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 7/219 (3%)
Query: 31 YNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM- 89
Y+TLI + A R ++M +G + V++ ALLN F V + +
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 90 -RMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
R N + ISY +I C + E+A+ ++ M + + F+ +++ + G+
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCK--MRNLKEALNTYAVMNHSGHVSDHFTC 206
+ A + +M K L+N Y+ I + K +KE + + M G D +
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSM---GLKPDTISY 281
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII 245
N L+ +C G L EA+ + + P+ + F +I
Sbjct: 282 NYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLI 320
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 79/175 (45%), Gaps = 4/175 (2%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
++P+ I+Y LI +C G E+A ++ +M G++ + + +L+ L K + +
Sbjct: 169 KIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVA 228
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ M G + + +Y I K E L+++M + PD ++++ L+
Sbjct: 229 DNLWNEMVKKGCELDNAAYNVRIMSAQKES-PERVKELIEEMSSMGLKPDTISYNYLMTA 287
Query: 143 FLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHS 197
+ G ++ AK++ + N + TLI++ C R ++ YA+ S
Sbjct: 288 YCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQG---YAIFKKS 339
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 104/225 (46%), Gaps = 13/225 (5%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
C+++ +I G+ KG+++EA L M+ G KP+ VT +L++G K
Sbjct: 321 TCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWID 380
Query: 87 ERMRMNGVRVGHISY-TAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
R + G + ++ A+ID K + EA + D+ + + VVT++ +I G+
Sbjct: 381 ARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKT----VVTWTTMIAGYAL 436
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS---D 202
G A ++ KM N+I + ++ +L++ + +M ++S D
Sbjct: 437 NGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLD 496
Query: 203 HFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
H++C +V R G+L+EA ++ + M P + ++N+
Sbjct: 497 HYSC--MVDLLGRKGKLEEA---LELIRNMSAKPDAGIWGALLNA 536
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 66.2 bits (160), Expect = 2e-11, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 106/232 (45%), Gaps = 15/232 (6%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
L P+ + YN +++ + E AF +L ++ G KP+ VTYG ++ + K+ LV
Sbjct: 589 LEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVH 648
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
+M+ + + ++Y +++ L K +EAVH ++DM I + L
Sbjct: 649 EFFRKMQKSSIP-NALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCL 707
Query: 144 LRAGKINNAKEIMCKMYKTVL-VLNNILY-STLIYNY-CKMRNLKEALNTYAVMNHSGHV 200
AG+ N ++ + VL ++ N++Y + L++ +++ + N V+ ++G
Sbjct: 708 CSAGRCNEGLNMVNFVNPVVLKLIENLIYKADLVHTIQFQLKKICRVANKPLVVTYTG-- 765
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
L+ SG +K A Y D M ++ P+ + ++ +Y G
Sbjct: 766 --------LIQACVDSGNIKNAAYIFDQMKKV-CSPNLVTCNIMLKAYLQGG 808
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 102/212 (48%), Gaps = 19/212 (8%)
Query: 32 NTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRM 91
N+ I H GN++EA + +M + + V++ A+++ +++ K + M
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSI----VSWIAMISAYAENGKMSKAWQVFDEMP- 108
Query: 92 NGVRVGHISYTAMIDGLCKNRL-LEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
VRV SY AMI + KN+ L +A L D+ + + V+++ +I GF+RAG+ +
Sbjct: 109 --VRV-TTSYNAMITAMIKNKCDLGKAYELFCDIPEK----NAVSYATMITGFVRAGRFD 161
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLV 210
A+ + + V +++ + L+ Y + EA+ + M V + +C+ +V
Sbjct: 162 EAEFLYAET--PVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGM----AVKEVVSCSSMV 215
Query: 211 ATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFD 242
+C+ GR+ +A D M+ + T+ D
Sbjct: 216 HGYCKMGRIVDARSLFDRMTERNVITWTAMID 247
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 104/221 (47%), Gaps = 12/221 (5%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +++N+LI G + I EA+ L ++M + V++ ++ G S G +S +
Sbjct: 340 DSVSWNSLITGLVQRKQISEAYELFEKMPGKDM----VSWTDMIKGFSGK---GEISKCV 392
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
E M + +I++TAMI N EEA+ ML+ + P+ TFS +++
Sbjct: 393 ELFGMMPEK-DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
+ +I ++ K +V + + ++L+ YCK N +A ++ ++ VS
Sbjct: 452 ADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVS----Y 507
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
N +++ + +G K+A + G +P+ F ++++
Sbjct: 508 NTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSA 548
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 45/210 (21%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVT--YGALLNGLSKHS-----KFGL 81
+++ +I + G + +A+++ DEM P VT Y A++ + K+ + L
Sbjct: 82 VSWIAMISAYAENGKMSKAWQVFDEM------PVRVTTSYNAMITAMIKNKCDLGKAYEL 135
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINP----DVVTFS 137
E+ +SY MI G + +EA L + P D V +
Sbjct: 136 FCDIPEK--------NAVSYATMITGFVRAGRFDEAEFLYAE------TPVKFRDSVASN 181
Query: 138 VLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHS 197
VL++G+LRAGK N A ++++ + V + S++++ YCKM + +A + + M
Sbjct: 182 VLLSGYLRAGKWNEA----VRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTER 237
Query: 198 GHVSDHFTCNVLVATFCRSGRLKEAEYFMD 227
NV+ T G K A +F D
Sbjct: 238 ---------NVITWTAMIDGYFK-AGFFED 257
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN ++YNT+I G+ G ++A +L + S G +PN VT+ ALL+ L
Sbjct: 502 PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKY 561
Query: 86 LERMRMN-GVRVGHISYTAMIDGLCKNRLLEEAVHLLDDM 124
+ M+ + + G Y M+D L ++ LL++A +L+ M
Sbjct: 562 FKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTM 601
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/220 (18%), Positives = 96/220 (43%)
Query: 33 TLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMN 92
+++G + EA ++ + + + +VTY +N + K+ + M
Sbjct: 358 AIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKK 417
Query: 93 GVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNA 152
G ++Y+ ++D K R L +AV L+ M + P++ ++ LI+ RA + A
Sbjct: 418 GFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRA 477
Query: 153 KEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVAT 212
++I +M + ++ + + Y+++I Y + + L+ + Y + D ++V
Sbjct: 478 EKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGV 537
Query: 213 FCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
F ++ R+ E + M G + +N+ ++G
Sbjct: 538 FSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAG 577
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 84/183 (45%)
Query: 38 HCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRMNGVRVG 97
+ +GN+E ++ M LK + A++NG SK F E G
Sbjct: 328 YVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAG 387
Query: 98 HISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMC 157
++Y I+ C+ +A L D+M+K + VV +S +++ + + ++++A +M
Sbjct: 388 QVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMA 447
Query: 158 KMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSG 217
KM + N +Y++LI + + +L+ A + M + + D + +++ + RS
Sbjct: 448 KMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSK 507
Query: 218 RLK 220
L+
Sbjct: 508 ELE 510
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 54/122 (44%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN YN+LID H ++ A ++ EM + P++V+Y ++++ ++ +
Sbjct: 456 PNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVEL 515
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
+ RMN ++ M+ K ++E + LL DM D +S +N
Sbjct: 516 YQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRD 575
Query: 146 AG 147
AG
Sbjct: 576 AG 577
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
+TY I+ +C +A L DEMV G V Y +++ K + + +
Sbjct: 389 VTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAK 448
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
M+ G + Y ++ID + L A + +M +A + PD V+++ +I+ + R+ +
Sbjct: 449 MKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKE 508
Query: 149 INNAKEI 155
+ E+
Sbjct: 509 LERCVEL 515
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 99/235 (42%), Gaps = 43/235 (18%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
PN I +N +I G+ G EA + EM++ ++P+
Sbjct: 286 PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDT---------------------- 323
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
IS T+ I + LE+A + + + ++ DV S LI+ F +
Sbjct: 324 -------------ISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 146 AGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG-HVSDHF 204
G + A+ + + L + +++S +I Y +EA++ Y M G H +D
Sbjct: 371 CGSVEGARLV----FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426
Query: 205 TCNVLVATFC-RSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAF 258
+L+A C SG ++E +F + M+ ++P + C+I+ G +G +A+
Sbjct: 427 FLGLLMA--CNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAY 479
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSH-GLKPNEVTYGALLNGLSKHSKFGLVSS 84
P+ ITYN+++D G + E +L M + N +TY +LNG+ K +F +
Sbjct: 210 PDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLV 269
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
M G+ +SYTA+ID L ++ ++E++ L D+M + I P V + LI+
Sbjct: 270 IYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLK 329
Query: 145 RAGKINNAKEI 155
++G +A ++
Sbjct: 330 KSGDFQSALQL 340
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 1/180 (0%)
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
++S L+ + + + I +I + R +++ + +L +M + PDV+T++ +++
Sbjct: 161 LTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLD 220
Query: 142 GFLRAGKINNAKEIMCKMYKTVLV-LNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
RAG +N ++ M + V +N I Y+T++ K L Y M G
Sbjct: 221 ILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIE 280
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKAFFL 260
D + ++ + RSG +KE+ D M + + PS + +I+ SGD A L
Sbjct: 281 PDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQL 340
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 78/162 (48%), Gaps = 1/162 (0%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
I N +I I++ +L EM KP+ +TY ++L+ L + + L
Sbjct: 178 IVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLST 237
Query: 89 MRMN-GVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAG 147
M+ + V V I+Y +++G+ K + + + ++M++ I PD+++++ +I+ R+G
Sbjct: 238 MKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSG 297
Query: 148 KINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALN 189
+ + + +M + + + +Y LI K + + AL
Sbjct: 298 NVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQ 339
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
Query: 26 PNCITYNTLIDGHCSKGNI-EEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSS 84
P I+Y L+ KG + +EAFR+ + M+ G++PN Y + + L+ KF L+ +
Sbjct: 491 PTVISYGALLSA-LEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDT 549
Query: 85 TLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFL 144
L+ M G+ +++ A+I G +N L A M ++ P+ +T+ +LI
Sbjct: 550 LLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALA 609
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLI 175
K A E+ K L L++ Y ++
Sbjct: 610 NDAKPRLAYELHVKAQNEGLKLSSKPYDAVV 640
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 12/239 (5%)
Query: 26 PNCITY-------NTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSK 78
PN ++Y N L+ +G RLL++M GLKP + A+L SK S+
Sbjct: 414 PNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASE 473
Query: 79 FGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSV 138
+ M NG + ISY A++ L K +L +EA + + M+K I P++ ++
Sbjct: 474 TTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTT 533
Query: 139 LINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKE-ALNTYAVMNHS 197
+ + K N ++ +M + + + ++ +I C L A + M
Sbjct: 534 MASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISG-CARNGLSGVAYEWFHRMKSE 592
Query: 198 GHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS---YGNSGD 253
+ T +L+ + + A GL S+ +D ++ S YG + D
Sbjct: 593 NVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKSAETYGATID 651
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 25/229 (10%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
+T+ LI C +G+I+ A L E++S G KP+ +Y A+L+GL + + L+
Sbjct: 359 VTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDE 418
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDM-----LKASINPDVVTFSVLINGF 143
M+ NG+ + ++ M+ G CK R EEA +++ M ++AS D ++ + + GF
Sbjct: 419 MKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGF 478
Query: 144 ----LRAGKINNAKEIMCKMYKTVLVLNNILY-STLIYNYCKMRNLKEALNTYAVMNHSG 198
+R + N++ + + L N LY T + Y + N+ V++ S
Sbjct: 479 DPLAVRLKRDNDSTFSKAEFFDD---LGNGLYLHTDLDAYEQRVNM--------VLDRS- 526
Query: 199 HVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
V F N L+ G L+ A +D M+R G S +F ++ S
Sbjct: 527 -VLPEF--NSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRS 572
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 63/135 (46%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ N ++ C + E A+ ++E+ G K +EVT+G L+
Sbjct: 321 PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLY 380
Query: 86 LERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLR 145
L + G + SY A++ GL + L + +LD+M + + + TF +++ G+ +
Sbjct: 381 LSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCK 440
Query: 146 AGKINNAKEIMCKMY 160
A + AK I+ KM+
Sbjct: 441 ARQFEEAKRIVNKMF 455
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 103/236 (43%), Gaps = 5/236 (2%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+LP+ T+N L+ G+ S + + R L M+S G+KPN + A+ + L +
Sbjct: 940 VLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKAL 999
Query: 84 STLERMRMNGVRVG-HISYTAMIDGLCKNRLLEEAVHLLDDMLK-ASINPDVVTFSVLIN 141
+ M G +G + T +++ L + +A L + + + P+ + +I
Sbjct: 1000 DLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPN---YDNIIK 1056
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
G ++ A ++ M K + + Y ++I + L +A++ + M G
Sbjct: 1057 KLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSP 1116
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
T + LV FC + ++ E+E + M +G PS F +I+ + + +KA
Sbjct: 1117 SISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKA 1172
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 39/201 (19%)
Query: 23 NLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLV 82
++LP +N+LI G+++ A RLLDEM G K LS+ S
Sbjct: 526 SVLPE---FNSLIVRASEDGDLQTALRLLDEMARWGQK------------LSRRS----- 565
Query: 83 SSTLERMRMNGVRVGHISYTAMIDGLCKNRL-LEEAVHLLDDMLKASINPDVVTFSVLIN 141
+ ++ LC +R L ++ LL+ K + D T + L+
Sbjct: 566 ------------------FAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQ 607
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
+ + G ++K I KM + ++N+ Y++LI +CK L + LN + + +
Sbjct: 608 EYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLP 667
Query: 202 DHFTCNVLVATFCRSGRLKEA 222
D C L R G ++E
Sbjct: 668 DLNDCGDLWNCLVRKGLVEEV 688
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 101/230 (43%), Gaps = 3/230 (1%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
I YN LI N E ++L EM G+ P+E T+ L++G S + + L
Sbjct: 910 IIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSA 969
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASIN-PDVVTFSVLINGFLRAG 147
M G++ + S A+ LC N +++A+ L M N V + ++ + G
Sbjct: 970 MISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKG 1029
Query: 148 KINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCN 207
+I A++ + ++ + ++ N Y +I NL A++ M + + + +
Sbjct: 1030 EIPKAEDFLTRVTRNGMMAPN--YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYD 1087
Query: 208 VLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
++ R +L +A F M +GL PS S + +++ + + L++
Sbjct: 1088 SVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLES 1137
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 65.5 bits (158), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 5/207 (2%)
Query: 22 FNLLPNCITYNTLIDGHCS-KGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
FN P N ++D S +G +++AF L HG+ PN +Y L+ +
Sbjct: 148 FNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLS 207
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ +M V SY +I G C+ + A+ LLDDML PD LI
Sbjct: 208 IAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLI 263
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHV 200
G G + K+ + +M + + + L+ +C ++EA + V+ +G
Sbjct: 264 GGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGET 323
Query: 201 SDHFTCNVLVATFCRSGRLKEAEYFMD 227
T +++ C ++ + F++
Sbjct: 324 LHSDTWEMVIPLICNEDESEKIKLFLE 350
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 16/228 (7%)
Query: 32 NTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERM-R 90
NT++ + + G + EA+R+ M+ + V + +++ G +K + + M +
Sbjct: 165 NTMLHMYVTCGCLIEAWRIFLGMIGFDV----VAWNSMIMGFAKCGLIDQAQNLFDEMPQ 220
Query: 91 MNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGKIN 150
NGV S+ +MI G +N ++A+ + +M + + PD T L+N G
Sbjct: 221 RNGV-----SWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASE 275
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC-NVL 209
+ I + + LN+I+ + LI YCK ++E LN + +C N +
Sbjct: 276 QGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKK-----QLSCWNSM 330
Query: 210 VATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGDALKA 257
+ +G + A + R GL+P + +F ++ + +SG+ +A
Sbjct: 331 ILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRA 378
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 12/230 (5%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +++NT++ E RL M+ +P+ +T G LL G + S L S
Sbjct: 437 DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH 496
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
G+ +ID K L +A + D M N DVV++S LI G+ ++
Sbjct: 497 CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM----DNRDVVSWSTLIVGYAQS 552
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS---DH 203
G A + +M + N++ + ++ + ++E L YA M +S +H
Sbjct: 553 GFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEH 612
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
C+ +V R+GRL EAE F+D M L+P + ++++ G+
Sbjct: 613 --CSCVVDLLARAGRLNEAERFIDEMK---LEPDVVVWKTLLSACKTQGN 657
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ ++++TLI G+ G EEA L EM S G++PN VT+ +L S GLV L
Sbjct: 538 DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTAC---SHVGLVEEGL 594
Query: 87 E----RMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLING 142
+ +G+ + ++D L + L EA +D+M + PDVV + L++
Sbjct: 595 KLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEM---KLEPDVVVWKTLLSA 651
Query: 143 FLRAGKINNAKE 154
G ++ A++
Sbjct: 652 CKTQGNVHLAQK 663
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 100/248 (40%), Gaps = 36/248 (14%)
Query: 30 TYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLN---GLSKHSKFGLVSSTL 86
+ +I A L +EM++ G PNE T+ +++ GL S G V ++
Sbjct: 91 AWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSV 150
Query: 87 ERMRMNGVRV----------------------------GHISYTAMIDGLCKNRLLEEAV 118
+ G V IS+T MI L R EA+
Sbjct: 151 IKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREAL 210
Query: 119 HLLDDMLKASINPDVVTFSVLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNY 178
+M+KA + P+ TF L+ G + K I + + LN +L ++L+ Y
Sbjct: 211 QFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFY 269
Query: 179 CKMRNLKEALNTYAVMNHSGHVSDHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPST 238
+ +++A+ V+N SG D F +V+ F R+ R KEA M +GL P+
Sbjct: 270 SQFSKMEDAVR---VLNSSGE-QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNN 325
Query: 239 SAFDCIIN 246
+ I++
Sbjct: 326 FTYSAILS 333
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 112/240 (46%), Gaps = 19/240 (7%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSK--HSKFGL-V 82
PN +++ TLI G G +++ F LL EMV ++PN VT +L SK H + L +
Sbjct: 390 PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEI 449
Query: 83 SSTLERMRMNG-VRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
+ L R ++G + VG+ +++D +R ++ A +++ M + D +T++ L+
Sbjct: 450 HAYLLRRHVDGEMVVGN----SLVDAYASSRKVDYAWNVIRSMKRR----DNITYTSLVT 501
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVS 201
F GK A ++ MY + ++ + I + L+ + + SG
Sbjct: 502 RFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSG 561
Query: 202 DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG---DALKAF 258
N LV + + G L++A+ + ++ P +++ +++ ++G AL AF
Sbjct: 562 AASVLNSLVDMYSKCGSLEDAKKVFEEIA----TPDVVSWNGLVSGLASNGFISSALSAF 617
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 32 NTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLERMRM 91
N+L+D + G++E+A ++ +E+ + P+ V++ L++GL+ + S E MRM
Sbjct: 567 NSLVDMYSKCGSLEDAKKVFEEIAT----PDVVSWNGLVSGLASNGFISSALSAFEEMRM 622
Query: 92 NGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKA-SINPDVVTFSVLINGFLRAGKIN 150
+++ ++ RL + + M K +I P V + L+ RAG++
Sbjct: 623 KETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLE 682
Query: 151 NAKEIMCKMYKTVLVLNNILYSTLIYNYCKMR 182
A ++ M+ L N +++ TL+ C+ R
Sbjct: 683 EATGVVETMH---LKPNAMIFKTLL-RACRYR 710
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 5/158 (3%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ I++ +I EA + EMV G+ PNE T+ LL G S +
Sbjct: 189 DTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLL-GASSFLGLEFGKTIH 247
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+ + G+ + + T+++D + +E+AV +L+ +S DV ++ +++GF+R
Sbjct: 248 SNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLN----SSGEQDVFLWTSVVSGFVRN 303
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNL 184
+ A +M L NN YS ++ +R+L
Sbjct: 304 LRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSL 341
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 22 FNLLP--NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF 79
F +P + ++YN +I G+ G E A +L DEM L V++ ++ G ++
Sbjct: 87 FKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL----VSWNVMIKGYVRNRNL 142
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
G E M V S+ M+ G +N +++A + D M + + V+++ L
Sbjct: 143 GKARELFEIMPERDV----CSWNTMLSGYAQNGCVDDARSVFDRMPE----KNDVSWNAL 194
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
++ +++ K+ A C ++K+ + ++ L+ + K + + EA + MN
Sbjct: 195 LSAYVQNSKMEEA----CMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMN---- 246
Query: 200 VSDHFTCNVLVATFCRSGRLKEAEYFMDH 228
V D + N ++ + +SG++ EA D
Sbjct: 247 VRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 20/174 (11%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +++NT+I G+ G I+EA +L DE + T+ A+++G ++
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESPVQDV----FTWTAMVSGYIQNRMVEEARELF 304
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINP--DVVTFSVLINGFL 144
++M +S+ AM+ G + +E A L D M P +V T++ +I G+
Sbjct: 305 DKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVM------PCRNVSTWNTMITGYA 354
Query: 145 RAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
+ GKI+ AK + KM K + + ++ +I Y + + EAL + M G
Sbjct: 355 QCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 102/234 (43%), Gaps = 11/234 (4%)
Query: 22 FNLLP--NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKF 79
F+++P N T+NT+I G+ G I EA L D+M K + V++ A++ G S+
Sbjct: 335 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP----KRDPVSWAAMIAGYSQSGHS 390
Query: 80 GLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVL 139
+M G R+ S+++ + LE L ++K + L
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNAL 450
Query: 140 INGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGH 199
+ + + G I A ++ +K + + + ++T+I Y + + AL + M G
Sbjct: 451 LLMYCKCGSIEEANDL----FKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGL 506
Query: 200 VSDHFTCNVLVATFCRSGRL-KEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
D T +++ +G + K +YF G+ P++ + C+++ G +G
Sbjct: 507 KPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAG 560
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 113/295 (38%), Gaps = 68/295 (23%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSK----FGLV 82
N +++ +I G EEA L EM G++PNE TY +L L S +V
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVV 420
Query: 83 SSTLERMRMNG-------VRVGH----------------ISYTAMIDGLCKNRLLEEAVH 119
+ ER G V++G ++++AM+ G + E A+
Sbjct: 421 KTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIK 480
Query: 120 LLDDMLKASINPDVVTFSVLIN----------------GF-------------------- 143
+ ++ K I P+ TFS ++N GF
Sbjct: 481 MFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMY 540
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
+ G I +A+E+ + + LV ++++I Y + +AL+ + M D
Sbjct: 541 AKKGNIESAEEVFKRQREKDLV----SWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSR-MGLDPSTSAFDCIINSYGNSGDALKA 257
T + A +G ++E E + D M R + P+ C+++ Y +G KA
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKA 651
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 117/307 (38%), Gaps = 83/307 (27%)
Query: 22 FNLLP-NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFG 80
F +P N +++ ++ C G E+A L DEM N V++ L+ GL ++
Sbjct: 131 FREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNGDME 186
Query: 81 LVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLI 140
+ M V +S+ AMI G +N +EEA L DM + +VVT++ ++
Sbjct: 187 KAKQVFDAMPSRDV----VSWNAMIKGYIENDGMEEAKLLFGDMSEK----NVVTWTSMV 238
Query: 141 NGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNY---------------------- 178
G+ R G + A + C+M + +V + S +N
Sbjct: 239 YGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPN 298
Query: 179 ---------------CKMRNLKEAL------NTYAVMNHSGHVS---------------- 201
+ R L E L N + ++H G ++
Sbjct: 299 GETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASA 358
Query: 202 --------DHFTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
D +CN+++ + ++G L+ AE + + + ++ +I+ Y +GD
Sbjct: 359 QSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSL---HDKVSWTSMIDGYLEAGD 415
Query: 254 ALKAFFL 260
+AF L
Sbjct: 416 VSRAFGL 422
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 45/226 (19%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
+++ ++IDG+ G++ AF L ++ H K G
Sbjct: 401 VSWTSMIDGYLEAGDVSRAFGLFQKL---------------------HDKDG-------- 431
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
+++T MI GL +N L EA LL DM++ + P T+SVL++
Sbjct: 432 ----------VTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSN 481
Query: 149 INNAKEIMCKMYKTVLVLNN--ILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
++ K I C + KT + IL ++L+ Y K +++A +A M D +
Sbjct: 482 LDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQ----KDTVSW 537
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINSYGNSG 252
N ++ G +A M G P++ F ++++ +SG
Sbjct: 538 NSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSG 583
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 21/194 (10%)
Query: 29 ITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTLER 88
+ + +L+ + G ++EA L + M N VT A+L G K + +
Sbjct: 78 VYWTSLLSKYAKTGYLDEARVLFEVMPER----NIVTCNAMLTGYVKCRRMNEAWTLFRE 133
Query: 89 MRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRAGK 148
M N V S+T M+ LC + E+AV L D+M + +VV+++ L+ G +R G
Sbjct: 134 MPKNVV-----SWTVMLTALCDDGRSEDAVELFDEMPER----NVVSWNTLVTGLIRNGD 184
Query: 149 INNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTCNV 208
+ AK++ M +V ++ +I Y + ++EA + M+ V T
Sbjct: 185 MEKAKQVFDAMPSRDVV----SWNAMIKGYIENDGMEEAKLLFGDMSEKNVV----TWTS 236
Query: 209 LVATFCRSGRLKEA 222
+V +CR G ++EA
Sbjct: 237 MVYGYCRYGDVREA 250
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 15/230 (6%)
Query: 27 NCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSSTL 86
+ +++ ++ID + E F L E+V +PNE T+ +LN + + L
Sbjct: 283 DVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVH 342
Query: 87 ERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
M G + ++++D K +E A H++D K PD+V+++ LI G +
Sbjct: 343 GYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPK----PDLVSWTSLIGGCAQN 398
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHS---GHVSDH 203
G+ + A + + K+ +++ + ++ +++ L + + H SDH
Sbjct: 399 GQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDH 458
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCII---NSYGN 250
+TC LV RSGR E +S M + PS + ++ ++YGN
Sbjct: 459 YTC--LVDLLARSGRF---EQLKSVISEMPMKPSKFLWASVLGGCSTYGN 503
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 11/177 (6%)
Query: 26 PNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVSST 85
P+ +++ +LI G G +EA + D ++ G KP+ VT+ +N LS + GLV
Sbjct: 383 PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTF---VNVLSACTHAGLVEKG 439
Query: 86 LERMR--MNGVRVGHIS--YTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
LE R+ H S YT ++D L ++ E+ ++ +M + P ++ ++
Sbjct: 440 LEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEM---PMKPSKFLWASVLG 496
Query: 142 GFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSG 198
G G I+ A+E +++K + N + Y T+ Y +E M G
Sbjct: 497 GCSTYGNIDLAEEAAQELFK-IEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIG 552
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 113/238 (47%), Gaps = 17/238 (7%)
Query: 22 FNLLPN--CITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSK--HS 77
F+ +PN ++N +++G+ G +EEA +L DEM + + ++ A++ G K
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMT----EKDSYSWTAMVTGYVKKDQP 198
Query: 78 KFGLVSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFS 137
+ LV +L + R+ R + + + + + + +++A ++ D V +S
Sbjct: 199 EEALVLYSLMQ-RVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWS 257
Query: 138 VLINGFLRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHS 197
L++ + + G I+ A+ I K+ + +V ++++I Y K +E + ++ + S
Sbjct: 258 SLMDMYGKCGCIDEARNIFDKIVEKDVV----SWTSMIDRYFKSSRWREGFSLFSELVGS 313
Query: 198 GHVSDHFT-CNVLVATFCRSGRLKE-AEYFMDHMSRMGLDPSTSAFDCIINSYGNSGD 253
+ +T VL A C +E + +M+R+G DP + A +++ Y G+
Sbjct: 314 CERPNEYTFAGVLNA--CADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGN 369
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 4/211 (1%)
Query: 24 LLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGLVS 83
+ PN +Y+ +I GN+ ++ RL DEM GL P Y +L+ L++ F
Sbjct: 290 ITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAM 349
Query: 84 STLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLINGF 143
++++ G++ ++Y +MI LC+ L+ A ++L M+ +++P V TF + F
Sbjct: 350 KLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTF----HAF 405
Query: 144 LRAGKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDH 203
L A E++ +M + L + ++ K + + AL +A M+ V++
Sbjct: 406 LEAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANP 465
Query: 204 FTCNVLVATFCRSGRLKEAEYFMDHMSRMGL 234
+ G L++A M G
Sbjct: 466 ALYLATIQGLLSCGWLEKAREIYSEMKSKGF 496
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 92/221 (41%), Gaps = 14/221 (6%)
Query: 34 LIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKH------SKFGLVSSTLE 87
++D + + + +A R D M P + + LL L +H +F L S L
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLF 254
Query: 88 RMRMNGVRVGHISYTAMIDGLCKNRL-LEEAVHLLDDMLKASINPDVVTFSVLINGFLRA 146
+ + G + +++G C + EA + +M I P+ ++S +I+ F +
Sbjct: 255 PVDVEG-------FNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKV 307
Query: 147 GKINNAKEIMCKMYKTVLVLNNILYSTLIYNYCKMRNLKEALNTYAVMNHSGHVSDHFTC 206
G + ++ + +M K L +Y++L+Y + EA+ +N G D T
Sbjct: 308 GNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTY 367
Query: 207 NVLVATFCRSGRLKEAEYFMDHMSRMGLDPSTSAFDCIINS 247
N ++ C +G+L A + M L P+ F + +
Sbjct: 368 NSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEA 408
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 22 FNLLPNCITYNTLIDGHCSKGNIEEAFRLLDEMVSHGLKPNEVTYGALLNGLSKHSKFGL 81
FNL PN +N ++ G+ + N+ A ++ +M G+KP+ +T+G L+N ++
Sbjct: 472 FNLEPNSSMFNCILAGYFREKNVSSALMVVKQMKEAGVKPDSITFGYLINNCTQEDA--- 528
Query: 82 VSSTLERMRMNGVRVGHISYTAMIDGLCKNRLLEEAVHLLDDMLKASINPDVVTFSVLIN 141
++ E M+ GV+ Y ++ID + E+A +L D +IN + + SVLI+
Sbjct: 529 ITKYYEEMKQAGVQATKRIYMSLIDAYAASGKFEKAKQVLVDPDVPAINQNELK-SVLIS 587
Query: 142 GFLRAGKINNAKEIMCKMYKT 162
GK +A I +M K
Sbjct: 588 ALASRGKWADALHIYEEMRKA 608